This is a small tutorial. This script will take a list of go terms and return the slimmed set version of your terms
We will first need a file that resembles the input "Gene2Term.csv"
In order to run the script you will go to your command line and you will get to the folder where slimitdown.py is held.
After this you will then type python3 slimitdown.py file.csv
The file.csv can be any file that resembles Gene2Term.csv
The program will download the go.obo file directly from Gene Ontology database and then begin to Generate the necessary files.
Output1: obsolete.tsv is all GO terms on the way to the slim term are obsolete
Output2: summary_file.tsv is all user GO terms with the definitions along with a slim term it is from and it's definition
Output3: frequency_table.tsv is a file with how often each slim therm appears along with its definition.