NAMESPACE

# Generated by roxygen2: do not edit by hand

export(AnnotateRanges)
export(MungeColumn)
export(ProcessLinear)
export(annotPie)
export(annotateCircs)
export(annotateFlanks)
export(annotateHostGenes)
export(annotateJunctions)
export(bedTracks)
export(circLinRatio)
export(getStudiesList)
export(gtf2sqlite)
export(histogram)
export(loadAnnotation)
export(readCircs)
export(resTable)
export(summarizeCircs)
export(testCoordinateIndexing)
export(uniqReadsQC)
export(writeBedTracks)
import(AnnotationHub)
import(DBI)
import(RMySQL)
import(S4Vectors)
import(SummarizedExperiment)
import(ggplot2)
import(methods)
import(stringr)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,saveDb)
importFrom(BiocGenerics,sort)
importFrom(GenomeInfoDb,"seqlevels<-")
importFrom(GenomeInfoDb,"seqlevelsStyle<-")
importFrom(GenomeInfoDb,seqlevelsStyle)
importFrom(GenomicFeatures,makeTxDbFromGRanges)
importFrom(GenomicRanges,GRangesList)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(GenomicRanges,reduce)
importFrom(GenomicRanges,resize)
importFrom(IRanges,findOverlaps)
importFrom(RColorBrewer,brewer.pal)
importFrom(biomaRt,getBM)
importFrom(biomaRt,useDataset)
importFrom(biomaRt,useMart)
importFrom(data.table,data.table)
importFrom(data.table,dcast.data.table)
importFrom(data.table,fread)
importFrom(data.table,rbindlist)
importFrom(data.table,set)
importFrom(data.table,setnames)
importFrom(hash,hash)
importFrom(hash,keys)
importFrom(rtracklayer,export)
importFrom(rtracklayer,score)