DESCRIPTION

Package: tso500R
Type: Package
Title: Parser For TSO500 Analysis Output Files 
Version: 0.1.0
Authors@R: 
    c(person("Christopher", "Mohr", email = "christopher.mohr@boehringer-ingelheim.de", role = c("aut", "cre")),
      person("Alexander", "Peltzer", email = "alexander.peltzer@boehringer-ingelheim.com", role = c("ctb")),
      person("Sophie", "Paul", email = "sophie.paul@addenbrookes.nhs.uk", role = c("aut")))
Description: TSO500R(eader) is an R package developed for Illumina TSO500 data. It can be used for importing and processing of files produced by the Illumina TSO500 DRAGEN analysis pipeline and the LocalApp.
  The package provides different functions for parsing the various output files produced by the Illumina pipelines. This includes the quality control files as well as the analysis outputs. Besides, it offers functionality to integrate the different result types, e.g. small variants and amplifications. 
  Other features include functions for basic plotting and export functionality for writing `RData` objects or to generate DRAGEN analysis pipeline samplesheets.
License: MIT
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Depends:
  dplyr,
  ggplot2,
  janitor,
  magrittr,
  openxlsx,
  purrr,
  readr,
  stringr,
  tidyr