Update docs

docs/getting_started.md

@@ -79,7 +79,8 @@ For more details, please refer to [Configuration files](user_guide/params_files.
 
 ## Implementing a stage
 
-A stage is a single step in your analysis and usually generates some kind of output data from input data. The input data can also be supplied by previous stages. To create a stage, use the `dso create stage` command and select either the _bash_ or _quarto_ template as a starting-point.
+A stage is a single step in your analysis and usually generates some kind of output data from input data. The input data can also be supplied by previous stages. To create a stage, use the `dso create stage` command and select either the _bash_ or one of the _quarto_
+[templates](user_guide/templates.md) as a starting-point.
 
 The essential files of a stage are:
 

docs/user_guide/templates.md

@@ -19,7 +19,9 @@ Folder templates:
 
 Stage templates:
 
--   [quarto](https://github.com/Boehringer-Ingelheim/dso/tree/main/src/dso/templates/stage/quarto) - Template for quarto notebook in R
+-   [quarto_r](https://github.com/Boehringer-Ingelheim/dso/tree/main/src/dso/templates/stage/quarto) - Template for quarto notebook in R
+-   [quarto_py](https://github.com/Boehringer-Ingelheim/dso/tree/main/src/dso/templates/stage/quarto) - Template for quarto notebook in Python (quarto markdown (`.qmd`) format)
+-   [quarto_r](https://github.com/Boehringer-Ingelheim/dso/tree/main/src/dso/templates/stage/quarto) - Template for quarto notebook in Python (jupyter notebook (`.ipynb`) format)
 -   [bash](https://github.com/Boehringer-Ingelheim/dso/tree/main/src/dso/templates/stage/bash) - Template for executing a bash snippet
 
 The source code of the templates can be [inspected on GitHub](https://github.com/Boehringer-Ingelheim/dso/tree/main/src/dso/templates).