NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(quietBCRgenes,Seurat)
S3method(quietBCRgenes,default)
export(CoNGAfy)
export(Ibex.matrix)
export(combineExpandedBCR)
export(getHumanIgPseudoGenes)
export(quietBCRgenes)
export(runIbex)
importFrom(Matrix,colSums)
importFrom(Matrix,sparse.model.matrix)
importFrom(SeuratObject,CreateAssayObject)
importFrom(SeuratObject,CreateDimReducObject)
importFrom(SeuratObject,CreateSeuratObject)
importFrom(SeuratObject,DefaultAssay)
importFrom(SeuratObject,VariableFeatures)
importFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(SingleCellExperiment,colData)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SummarizedExperiment,"assay<-")
importFrom(SummarizedExperiment,assay)
importFrom(immApex,geometricEncoder)
importFrom(immApex,getIR)
importFrom(immApex,onehotEncoder)
importFrom(immApex,propertyEncoder)
importFrom(keras3,load_model)
importFrom(rlang,"%||%")
importFrom(scRepertoire,combineBCR)
importFrom(stats,as.formula)
importFrom(stats,complete.cases)
importFrom(tools,R_user_dir)
importFrom(utils,download.file)
importFrom(utils,read.csv)