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`harmonize_subjid()` throws uneccessary warnings #84

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DanChaltiel opened this issue Jan 29, 2025 · 0 comments

Open

4 tasks

`harmonize_subjid()` throws uneccessary warnings #84

DanChaltiel opened this issue Jan 29, 2025 · 0 comments

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bug

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DanChaltiel commented Jan 29, 2025 •

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EDCimport/R/helpers.R

Line 259 in a638724

    
           #' @param preprocess an optional function to modify the subject ID column, for example `as.numeric()`. See examples.

Warning: Datasets from this lookup are not available in the global environment.

Thrown by edc_lookup() from get_subjid_cols()

don't use get_subjid_cols() inside the mutate
set default col_subjid=NULL, then set it inside using the lookup from datalist, or edc_lookup(check=FALSE)
why do we preprocess twice?
preprocess=as.numeric (e.g. atz) is VERY long

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