dag.svg

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<!-- Title: snakemake_dag Pages: 1 -->
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<title>snakemake_dag</title>
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<!-- 0 -->
<g id="node1" class="node">
<title>0</title>
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<text text-anchor="middle" x="205" y="-15.5" font-family="sans" font-size="10.00">all</text>
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<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
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<text text-anchor="middle" x="324" y="-447.5" font-family="sans" font-size="10.00">merge_count_tables</text>
</g>
<!-- 1&#45;&gt;0 -->
<g id="edge1" class="edge">
<title>1&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M265.87,-433.98C207.01,-418.74 124.42,-397.19 123,-396 89.65,-368 82,-350.55 82,-307 82,-307 82,-307 82,-161 82,-107.25 132.97,-63.86 169.28,-39.76"/>
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<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M419.5,-108C419.5,-108 362.5,-108 362.5,-108 356.5,-108 350.5,-102 350.5,-96 350.5,-96 350.5,-84 350.5,-84 350.5,-78 356.5,-72 362.5,-72 362.5,-72 419.5,-72 419.5,-72 425.5,-72 431.5,-78 431.5,-84 431.5,-84 431.5,-96 431.5,-96 431.5,-102 425.5,-108 419.5,-108"/>
<text text-anchor="middle" x="391" y="-87.5" font-family="sans" font-size="10.00">TEs_counting</text>
</g>
<!-- 1&#45;&gt;20 -->
<g id="edge27" class="edge">
<title>1&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M265.7,-433.8C219.23,-421.23 160.56,-404.17 152,-396 121.6,-366.97 120,-349.03 120,-307 120,-307 120,-307 120,-233 120,-192.55 110.36,-172.56 139,-144 166.8,-116.29 275.04,-101.65 340.28,-95.2"/>
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<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M136.5,-540C136.5,-540 67.5,-540 67.5,-540 61.5,-540 55.5,-534 55.5,-528 55.5,-528 55.5,-516 55.5,-516 55.5,-510 61.5,-504 67.5,-504 67.5,-504 136.5,-504 136.5,-504 142.5,-504 148.5,-510 148.5,-516 148.5,-516 148.5,-528 148.5,-528 148.5,-534 142.5,-540 136.5,-540"/>
<text text-anchor="middle" x="102" y="-519.5" font-family="sans" font-size="10.00">align_first_pass</text>
</g>
<!-- 2&#45;&gt;1 -->
<g id="edge3" class="edge">
<title>2&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M148.54,-506.33C180.85,-496.14 224.31,-482.44 259.89,-471.22"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="261.21,-474.47 269.7,-468.12 259.11,-467.79 261.21,-474.47"/>
</g>
<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M136.5,-468C136.5,-468 83.5,-468 83.5,-468 77.5,-468 71.5,-462 71.5,-456 71.5,-456 71.5,-444 71.5,-444 71.5,-438 77.5,-432 83.5,-432 83.5,-432 136.5,-432 136.5,-432 142.5,-432 148.5,-438 148.5,-444 148.5,-444 148.5,-456 148.5,-456 148.5,-462 142.5,-468 136.5,-468"/>
<text text-anchor="middle" x="110" y="-447.5" font-family="sans" font-size="10.00">move_bams</text>
</g>
<!-- 2&#45;&gt;25 -->
<g id="edge37" class="edge">
<title>2&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M103.98,-503.7C104.86,-495.98 105.92,-486.71 106.9,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="110.39,-478.44 108.05,-468.1 103.43,-477.64 110.39,-478.44"/>
</g>
<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M117.5,-612C117.5,-612 46.5,-612 46.5,-612 40.5,-612 34.5,-606 34.5,-600 34.5,-600 34.5,-588 34.5,-588 34.5,-582 40.5,-576 46.5,-576 46.5,-576 117.5,-576 117.5,-576 123.5,-576 129.5,-582 129.5,-588 129.5,-588 129.5,-600 129.5,-600 129.5,-606 123.5,-612 117.5,-612"/>
<text text-anchor="middle" x="82" y="-591.5" font-family="sans" font-size="10.00">merge_fastq_pe</text>
</g>
<!-- 3&#45;&gt;2 -->
<g id="edge9" class="edge">
<title>3&#45;&gt;2</title>
<path fill="none" stroke="grey" stroke-width="2" d="M86.94,-575.7C89.17,-567.9 91.85,-558.51 94.33,-549.83"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="97.73,-550.68 97.11,-540.1 91,-548.76 97.73,-550.68"/>
</g>
<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M116,-689C116,-689 12,-689 12,-689 6,-689 0,-683 0,-677 0,-677 0,-660 0,-660 0,-654 6,-648 12,-648 12,-648 116,-648 116,-648 122,-648 128,-654 128,-660 128,-660 128,-677 128,-677 128,-683 122,-689 116,-689"/>
<text text-anchor="middle" x="64" y="-677" font-family="sans" font-size="10.00">copy_fastq_pe</text>
<text text-anchor="middle" x="64" y="-666" font-family="sans" font-size="10.00">lane: lane1</text>
<text text-anchor="middle" x="64" y="-655" font-family="sans" font-size="10.00">sample: UNT&#45;RNA&#45;rep1</text>
</g>
<!-- 4&#45;&gt;3 -->
<g id="edge10" class="edge">
<title>4&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M68.92,-647.69C70.87,-639.82 73.15,-630.64 75.25,-622.17"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="78.69,-622.87 77.7,-612.32 71.89,-621.18 78.69,-622.87"/>
</g>
<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M247.5,-540C247.5,-540 178.5,-540 178.5,-540 172.5,-540 166.5,-534 166.5,-528 166.5,-528 166.5,-516 166.5,-516 166.5,-510 172.5,-504 178.5,-504 178.5,-504 247.5,-504 247.5,-504 253.5,-504 259.5,-510 259.5,-516 259.5,-516 259.5,-528 259.5,-528 259.5,-534 253.5,-540 247.5,-540"/>
<text text-anchor="middle" x="213" y="-519.5" font-family="sans" font-size="10.00">align_first_pass</text>
</g>
<!-- 5&#45;&gt;1 -->
<g id="edge4" class="edge">
<title>5&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M240.15,-503.88C254.53,-494.81 272.38,-483.55 287.91,-473.76"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="290.15,-476.48 296.74,-468.19 286.42,-470.56 290.15,-476.48"/>
</g>
<!-- 29 -->
<g id="node30" class="node">
<title>29</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M235.5,-468C235.5,-468 182.5,-468 182.5,-468 176.5,-468 170.5,-462 170.5,-456 170.5,-456 170.5,-444 170.5,-444 170.5,-438 176.5,-432 182.5,-432 182.5,-432 235.5,-432 235.5,-432 241.5,-432 247.5,-438 247.5,-444 247.5,-444 247.5,-456 247.5,-456 247.5,-462 241.5,-468 235.5,-468"/>
<text text-anchor="middle" x="209" y="-447.5" font-family="sans" font-size="10.00">move_bams</text>
</g>
<!-- 5&#45;&gt;29 -->
<g id="edge41" class="edge">
<title>5&#45;&gt;29</title>
<path fill="none" stroke="grey" stroke-width="2" d="M212.01,-503.7C211.57,-495.98 211.04,-486.71 210.55,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="214.04,-477.89 209.98,-468.1 207.05,-478.29 214.04,-477.89"/>
</g>
<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M246.5,-612C246.5,-612 175.5,-612 175.5,-612 169.5,-612 163.5,-606 163.5,-600 163.5,-600 163.5,-588 163.5,-588 163.5,-582 169.5,-576 175.5,-576 175.5,-576 246.5,-576 246.5,-576 252.5,-576 258.5,-582 258.5,-588 258.5,-588 258.5,-600 258.5,-600 258.5,-606 252.5,-612 246.5,-612"/>
<text text-anchor="middle" x="211" y="-591.5" font-family="sans" font-size="10.00">merge_fastq_pe</text>
</g>
<!-- 6&#45;&gt;5 -->
<g id="edge11" class="edge">
<title>6&#45;&gt;5</title>
<path fill="none" stroke="grey" stroke-width="2" d="M211.49,-575.7C211.71,-567.98 211.98,-558.71 212.23,-550.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="215.72,-550.2 212.51,-540.1 208.73,-550 215.72,-550.2"/>
</g>
<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M262,-689C262,-689 158,-689 158,-689 152,-689 146,-683 146,-677 146,-677 146,-660 146,-660 146,-654 152,-648 158,-648 158,-648 262,-648 262,-648 268,-648 274,-654 274,-660 274,-660 274,-677 274,-677 274,-683 268,-689 262,-689"/>
<text text-anchor="middle" x="210" y="-677" font-family="sans" font-size="10.00">copy_fastq_pe</text>
<text text-anchor="middle" x="210" y="-666" font-family="sans" font-size="10.00">lane: lane1</text>
<text text-anchor="middle" x="210" y="-655" font-family="sans" font-size="10.00">sample: TAM&#45;RNA&#45;rep2</text>
</g>
<!-- 7&#45;&gt;6 -->
<g id="edge12" class="edge">
<title>7&#45;&gt;6</title>
<path fill="none" stroke="grey" stroke-width="2" d="M210.27,-647.69C210.38,-639.91 210.51,-630.84 210.62,-622.45"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="214.12,-622.37 210.76,-612.32 207.12,-622.27 214.12,-622.37"/>
</g>
<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M390.5,-540C390.5,-540 321.5,-540 321.5,-540 315.5,-540 309.5,-534 309.5,-528 309.5,-528 309.5,-516 309.5,-516 309.5,-510 315.5,-504 321.5,-504 321.5,-504 390.5,-504 390.5,-504 396.5,-504 402.5,-510 402.5,-516 402.5,-516 402.5,-528 402.5,-528 402.5,-534 396.5,-540 390.5,-540"/>
<text text-anchor="middle" x="356" y="-519.5" font-family="sans" font-size="10.00">align_first_pass</text>
</g>
<!-- 8&#45;&gt;1 -->
<g id="edge5" class="edge">
<title>8&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M348.09,-503.7C344.45,-495.73 340.05,-486.1 336.01,-477.26"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="339.16,-475.74 331.82,-468.1 332.79,-478.65 339.16,-475.74"/>
</g>
<!-- 33 -->
<g id="node34" class="node">
<title>33</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M465.5,-468C465.5,-468 412.5,-468 412.5,-468 406.5,-468 400.5,-462 400.5,-456 400.5,-456 400.5,-444 400.5,-444 400.5,-438 406.5,-432 412.5,-432 412.5,-432 465.5,-432 465.5,-432 471.5,-432 477.5,-438 477.5,-444 477.5,-444 477.5,-456 477.5,-456 477.5,-462 471.5,-468 465.5,-468"/>
<text text-anchor="middle" x="439" y="-447.5" font-family="sans" font-size="10.00">move_bams</text>
</g>
<!-- 8&#45;&gt;33 -->
<g id="edge45" class="edge">
<title>8&#45;&gt;33</title>
<path fill="none" stroke="grey" stroke-width="2" d="M376.52,-503.7C386.87,-494.97 399.59,-484.24 410.84,-474.75"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="413.33,-477.23 418.72,-468.1 408.82,-471.88 413.33,-477.23"/>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M391.5,-612C391.5,-612 320.5,-612 320.5,-612 314.5,-612 308.5,-606 308.5,-600 308.5,-600 308.5,-588 308.5,-588 308.5,-582 314.5,-576 320.5,-576 320.5,-576 391.5,-576 391.5,-576 397.5,-576 403.5,-582 403.5,-588 403.5,-588 403.5,-600 403.5,-600 403.5,-606 397.5,-612 391.5,-612"/>
<text text-anchor="middle" x="356" y="-591.5" font-family="sans" font-size="10.00">merge_fastq_pe</text>
</g>
<!-- 9&#45;&gt;8 -->
<g id="edge13" class="edge">
<title>9&#45;&gt;8</title>
<path fill="none" stroke="grey" stroke-width="2" d="M356,-575.7C356,-567.98 356,-558.71 356,-550.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="359.5,-550.1 356,-540.1 352.5,-550.1 359.5,-550.1"/>
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<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M408,-689C408,-689 304,-689 304,-689 298,-689 292,-683 292,-677 292,-677 292,-660 292,-660 292,-654 298,-648 304,-648 304,-648 408,-648 408,-648 414,-648 420,-654 420,-660 420,-660 420,-677 420,-677 420,-683 414,-689 408,-689"/>
<text text-anchor="middle" x="356" y="-677" font-family="sans" font-size="10.00">copy_fastq_pe</text>
<text text-anchor="middle" x="356" y="-666" font-family="sans" font-size="10.00">lane: lane1</text>
<text text-anchor="middle" x="356" y="-655" font-family="sans" font-size="10.00">sample: TAM&#45;RNA&#45;rep3</text>
</g>
<!-- 10&#45;&gt;9 -->
<g id="edge14" class="edge">
<title>10&#45;&gt;9</title>
<path fill="none" stroke="grey" stroke-width="2" d="M356,-647.69C356,-639.91 356,-630.84 356,-622.45"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="359.5,-622.32 356,-612.32 352.5,-622.32 359.5,-622.32"/>
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<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M536.5,-540C536.5,-540 467.5,-540 467.5,-540 461.5,-540 455.5,-534 455.5,-528 455.5,-528 455.5,-516 455.5,-516 455.5,-510 461.5,-504 467.5,-504 467.5,-504 536.5,-504 536.5,-504 542.5,-504 548.5,-510 548.5,-516 548.5,-516 548.5,-528 548.5,-528 548.5,-534 542.5,-540 536.5,-540"/>
<text text-anchor="middle" x="502" y="-519.5" font-family="sans" font-size="10.00">align_first_pass</text>
</g>
<!-- 11&#45;&gt;1 -->
<g id="edge6" class="edge">
<title>11&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M458.46,-503.88C433.8,-494.18 402.78,-481.98 376.75,-471.74"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="377.99,-468.47 367.4,-468.07 375.43,-474.99 377.99,-468.47"/>
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<!-- 37 -->
<g id="node38" class="node">
<title>37</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M561.5,-468C561.5,-468 508.5,-468 508.5,-468 502.5,-468 496.5,-462 496.5,-456 496.5,-456 496.5,-444 496.5,-444 496.5,-438 502.5,-432 508.5,-432 508.5,-432 561.5,-432 561.5,-432 567.5,-432 573.5,-438 573.5,-444 573.5,-444 573.5,-456 573.5,-456 573.5,-462 567.5,-468 561.5,-468"/>
<text text-anchor="middle" x="535" y="-447.5" font-family="sans" font-size="10.00">move_bams</text>
</g>
<!-- 11&#45;&gt;37 -->
<g id="edge49" class="edge">
<title>11&#45;&gt;37</title>
<path fill="none" stroke="grey" stroke-width="2" d="M510.16,-503.7C513.91,-495.73 518.45,-486.1 522.62,-477.26"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="525.84,-478.64 526.94,-468.1 519.51,-475.66 525.84,-478.64"/>
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<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M537.5,-612C537.5,-612 466.5,-612 466.5,-612 460.5,-612 454.5,-606 454.5,-600 454.5,-600 454.5,-588 454.5,-588 454.5,-582 460.5,-576 466.5,-576 466.5,-576 537.5,-576 537.5,-576 543.5,-576 549.5,-582 549.5,-588 549.5,-588 549.5,-600 549.5,-600 549.5,-606 543.5,-612 537.5,-612"/>
<text text-anchor="middle" x="502" y="-591.5" font-family="sans" font-size="10.00">merge_fastq_pe</text>
</g>
<!-- 12&#45;&gt;11 -->
<g id="edge15" class="edge">
<title>12&#45;&gt;11</title>
<path fill="none" stroke="grey" stroke-width="2" d="M502,-575.7C502,-567.98 502,-558.71 502,-550.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="505.5,-550.1 502,-540.1 498.5,-550.1 505.5,-550.1"/>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M554,-689C554,-689 450,-689 450,-689 444,-689 438,-683 438,-677 438,-677 438,-660 438,-660 438,-654 444,-648 450,-648 450,-648 554,-648 554,-648 560,-648 566,-654 566,-660 566,-660 566,-677 566,-677 566,-683 560,-689 554,-689"/>
<text text-anchor="middle" x="502" y="-677" font-family="sans" font-size="10.00">copy_fastq_pe</text>
<text text-anchor="middle" x="502" y="-666" font-family="sans" font-size="10.00">lane: lane1</text>
<text text-anchor="middle" x="502" y="-655" font-family="sans" font-size="10.00">sample: UNT&#45;RNA&#45;rep2</text>
</g>
<!-- 13&#45;&gt;12 -->
<g id="edge16" class="edge">
<title>13&#45;&gt;12</title>
<path fill="none" stroke="grey" stroke-width="2" d="M502,-647.69C502,-639.91 502,-630.84 502,-622.45"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="505.5,-622.32 502,-612.32 498.5,-622.32 505.5,-622.32"/>
</g>
<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M677.5,-540C677.5,-540 608.5,-540 608.5,-540 602.5,-540 596.5,-534 596.5,-528 596.5,-528 596.5,-516 596.5,-516 596.5,-510 602.5,-504 608.5,-504 608.5,-504 677.5,-504 677.5,-504 683.5,-504 689.5,-510 689.5,-516 689.5,-516 689.5,-528 689.5,-528 689.5,-534 683.5,-540 677.5,-540"/>
<text text-anchor="middle" x="643" y="-519.5" font-family="sans" font-size="10.00">align_first_pass</text>
</g>
<!-- 14&#45;&gt;1 -->
<g id="edge7" class="edge">
<title>14&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M596.16,-511.65C545.66,-501.44 462.96,-484.36 392,-468 391.9,-467.98 391.8,-467.95 391.7,-467.93"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="392.74,-464.58 382.2,-465.7 391.14,-471.39 392.74,-464.58"/>
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<!-- 41 -->
<g id="node42" class="node">
<title>41</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M670.5,-468C670.5,-468 617.5,-468 617.5,-468 611.5,-468 605.5,-462 605.5,-456 605.5,-456 605.5,-444 605.5,-444 605.5,-438 611.5,-432 617.5,-432 617.5,-432 670.5,-432 670.5,-432 676.5,-432 682.5,-438 682.5,-444 682.5,-444 682.5,-456 682.5,-456 682.5,-462 676.5,-468 670.5,-468"/>
<text text-anchor="middle" x="644" y="-447.5" font-family="sans" font-size="10.00">move_bams</text>
</g>
<!-- 14&#45;&gt;41 -->
<g id="edge53" class="edge">
<title>14&#45;&gt;41</title>
<path fill="none" stroke="grey" stroke-width="2" d="M643.25,-503.7C643.36,-495.98 643.49,-486.71 643.61,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="647.11,-478.15 643.76,-468.1 640.11,-478.05 647.11,-478.15"/>
</g>
<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M681.5,-612C681.5,-612 610.5,-612 610.5,-612 604.5,-612 598.5,-606 598.5,-600 598.5,-600 598.5,-588 598.5,-588 598.5,-582 604.5,-576 610.5,-576 610.5,-576 681.5,-576 681.5,-576 687.5,-576 693.5,-582 693.5,-588 693.5,-588 693.5,-600 693.5,-600 693.5,-606 687.5,-612 681.5,-612"/>
<text text-anchor="middle" x="646" y="-591.5" font-family="sans" font-size="10.00">merge_fastq_pe</text>
</g>
<!-- 15&#45;&gt;14 -->
<g id="edge17" class="edge">
<title>15&#45;&gt;14</title>
<path fill="none" stroke="grey" stroke-width="2" d="M645.26,-575.7C644.93,-567.98 644.53,-558.71 644.16,-550.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="647.66,-549.95 643.73,-540.1 640.66,-550.25 647.66,-549.95"/>
</g>
<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M700,-689C700,-689 596,-689 596,-689 590,-689 584,-683 584,-677 584,-677 584,-660 584,-660 584,-654 590,-648 596,-648 596,-648 700,-648 700,-648 706,-648 712,-654 712,-660 712,-660 712,-677 712,-677 712,-683 706,-689 700,-689"/>
<text text-anchor="middle" x="648" y="-677" font-family="sans" font-size="10.00">copy_fastq_pe</text>
<text text-anchor="middle" x="648" y="-666" font-family="sans" font-size="10.00">lane: lane1</text>
<text text-anchor="middle" x="648" y="-655" font-family="sans" font-size="10.00">sample: TAM&#45;RNA&#45;rep1</text>
</g>
<!-- 16&#45;&gt;15 -->
<g id="edge18" class="edge">
<title>16&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M647.45,-647.69C647.24,-639.91 646.99,-630.84 646.76,-622.45"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="650.25,-622.22 646.48,-612.32 643.25,-622.41 650.25,-622.22"/>
</g>
<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M788.5,-540C788.5,-540 719.5,-540 719.5,-540 713.5,-540 707.5,-534 707.5,-528 707.5,-528 707.5,-516 707.5,-516 707.5,-510 713.5,-504 719.5,-504 719.5,-504 788.5,-504 788.5,-504 794.5,-504 800.5,-510 800.5,-516 800.5,-516 800.5,-528 800.5,-528 800.5,-534 794.5,-540 788.5,-540"/>
<text text-anchor="middle" x="754" y="-519.5" font-family="sans" font-size="10.00">align_first_pass</text>
</g>
<!-- 17&#45;&gt;1 -->
<g id="edge8" class="edge">
<title>17&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M707.35,-505.94C704.53,-505.23 701.74,-504.58 699,-504 564.59,-475.6 527.14,-492.71 392,-468 391.9,-467.98 391.8,-467.96 391.7,-467.94"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="392.62,-464.56 382.13,-466.05 391.26,-471.43 392.62,-464.56"/>
</g>
<!-- 45 -->
<g id="node46" class="node">
<title>45</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M780.5,-468C780.5,-468 727.5,-468 727.5,-468 721.5,-468 715.5,-462 715.5,-456 715.5,-456 715.5,-444 715.5,-444 715.5,-438 721.5,-432 727.5,-432 727.5,-432 780.5,-432 780.5,-432 786.5,-432 792.5,-438 792.5,-444 792.5,-444 792.5,-456 792.5,-456 792.5,-462 786.5,-468 780.5,-468"/>
<text text-anchor="middle" x="754" y="-447.5" font-family="sans" font-size="10.00">move_bams</text>
</g>
<!-- 17&#45;&gt;45 -->
<g id="edge57" class="edge">
<title>17&#45;&gt;45</title>
<path fill="none" stroke="grey" stroke-width="2" d="M754,-503.7C754,-495.98 754,-486.71 754,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="757.5,-478.1 754,-468.1 750.5,-478.1 757.5,-478.1"/>
</g>
<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M812.5,-612C812.5,-612 741.5,-612 741.5,-612 735.5,-612 729.5,-606 729.5,-600 729.5,-600 729.5,-588 729.5,-588 729.5,-582 735.5,-576 741.5,-576 741.5,-576 812.5,-576 812.5,-576 818.5,-576 824.5,-582 824.5,-588 824.5,-588 824.5,-600 824.5,-600 824.5,-606 818.5,-612 812.5,-612"/>
<text text-anchor="middle" x="777" y="-591.5" font-family="sans" font-size="10.00">merge_fastq_pe</text>
</g>
<!-- 18&#45;&gt;17 -->
<g id="edge19" class="edge">
<title>18&#45;&gt;17</title>
<path fill="none" stroke="grey" stroke-width="2" d="M771.31,-575.7C768.75,-567.9 765.67,-558.51 762.82,-549.83"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="766.07,-548.51 759.62,-540.1 759.42,-550.7 766.07,-548.51"/>
</g>
<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M846,-689C846,-689 742,-689 742,-689 736,-689 730,-683 730,-677 730,-677 730,-660 730,-660 730,-654 736,-648 742,-648 742,-648 846,-648 846,-648 852,-648 858,-654 858,-660 858,-660 858,-677 858,-677 858,-683 852,-689 846,-689"/>
<text text-anchor="middle" x="794" y="-677" font-family="sans" font-size="10.00">copy_fastq_pe</text>
<text text-anchor="middle" x="794" y="-666" font-family="sans" font-size="10.00">lane: lane1</text>
<text text-anchor="middle" x="794" y="-655" font-family="sans" font-size="10.00">sample: UNT&#45;RNA&#45;rep3</text>
</g>
<!-- 19&#45;&gt;18 -->
<g id="edge20" class="edge">
<title>19&#45;&gt;18</title>
<path fill="none" stroke="grey" stroke-width="2" d="M789.35,-647.69C787.51,-639.82 785.36,-630.64 783.37,-622.17"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="786.75,-621.26 781.06,-612.32 779.94,-622.85 786.75,-621.26"/>
</g>
<!-- 20&#45;&gt;0 -->
<g id="edge2" class="edge">
<title>20&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M350.18,-73.64C317.86,-61.47 273.09,-44.63 241.85,-32.87"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="242.8,-29.49 232.21,-29.24 240.34,-36.04 242.8,-29.49"/>
</g>
<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M244,-180C244,-180 160,-180 160,-180 154,-180 148,-174 148,-168 148,-168 148,-156 148,-156 148,-150 154,-144 160,-144 160,-144 244,-144 244,-144 250,-144 256,-150 256,-156 256,-156 256,-168 256,-168 256,-174 250,-180 244,-180"/>
<text text-anchor="middle" x="202" y="-159.5" font-family="sans" font-size="10.00">align_second_pass</text>
</g>
<!-- 21&#45;&gt;20 -->
<g id="edge21" class="edge">
<title>21&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M248.23,-143.88C276.32,-133.48 312.17,-120.2 340.92,-109.55"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="342.21,-112.8 350.38,-106.05 339.78,-106.24 342.21,-112.8"/>
</g>
<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#d88d56" stroke-width="2" d="M268.5,-252C268.5,-252 209.5,-252 209.5,-252 203.5,-252 197.5,-246 197.5,-240 197.5,-240 197.5,-228 197.5,-228 197.5,-222 203.5,-216 209.5,-216 209.5,-216 268.5,-216 268.5,-216 274.5,-216 280.5,-222 280.5,-228 280.5,-228 280.5,-240 280.5,-240 280.5,-246 274.5,-252 268.5,-252"/>
<text text-anchor="middle" x="239" y="-231.5" font-family="sans" font-size="10.00">bam_to_fastq</text>
</g>
<!-- 22&#45;&gt;21 -->
<g id="edge28" class="edge">
<title>22&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M229.85,-215.7C225.6,-207.64 220.44,-197.89 215.73,-188.98"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="218.81,-187.31 211.04,-180.1 212.62,-190.58 218.81,-187.31"/>
</g>
<!-- 46 -->
<g id="node47" class="node">
<title>46</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M370,-180C370,-180 286,-180 286,-180 280,-180 274,-174 274,-168 274,-168 274,-156 274,-156 274,-150 280,-144 286,-144 286,-144 370,-144 370,-144 376,-144 382,-150 382,-156 382,-156 382,-168 382,-168 382,-174 376,-180 370,-180"/>
<text text-anchor="middle" x="328" y="-159.5" font-family="sans" font-size="10.00">align_second_pass</text>
</g>
<!-- 22&#45;&gt;46 -->
<g id="edge58" class="edge">
<title>22&#45;&gt;46</title>
<path fill="none" stroke="grey" stroke-width="2" d="M261,-215.7C272.21,-206.88 286,-196.03 298.15,-186.47"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="300.56,-189.04 306.25,-180.1 296.23,-183.54 300.56,-189.04"/>
</g>
<!-- 47 -->
<g id="node48" class="node">
<title>47</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M496,-180C496,-180 412,-180 412,-180 406,-180 400,-174 400,-168 400,-168 400,-156 400,-156 400,-150 406,-144 412,-144 412,-144 496,-144 496,-144 502,-144 508,-150 508,-156 508,-156 508,-168 508,-168 508,-174 502,-180 496,-180"/>
<text text-anchor="middle" x="454" y="-159.5" font-family="sans" font-size="10.00">align_second_pass</text>
</g>
<!-- 22&#45;&gt;47 -->
<g id="edge64" class="edge">
<title>22&#45;&gt;47</title>
<path fill="none" stroke="grey" stroke-width="2" d="M280.74,-219.05C283.87,-218.02 286.99,-216.99 290,-216 323.35,-205.05 360.57,-193.01 391.11,-183.17"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="392.33,-186.46 400.78,-180.06 390.19,-179.79 392.33,-186.46"/>
</g>
<!-- 48 -->
<g id="node49" class="node">
<title>48</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M622,-180C622,-180 538,-180 538,-180 532,-180 526,-174 526,-168 526,-168 526,-156 526,-156 526,-150 532,-144 538,-144 538,-144 622,-144 622,-144 628,-144 634,-150 634,-156 634,-156 634,-168 634,-168 634,-174 628,-180 622,-180"/>
<text text-anchor="middle" x="580" y="-159.5" font-family="sans" font-size="10.00">align_second_pass</text>
</g>
<!-- 22&#45;&gt;48 -->
<g id="edge70" class="edge">
<title>22&#45;&gt;48</title>
<path fill="none" stroke="grey" stroke-width="2" d="M280.59,-218.52C283.75,-217.61 286.92,-216.75 290,-216 386.13,-192.52 415.29,-200.77 515.84,-180.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="516.73,-183.5 525.79,-178.02 515.29,-176.65 516.73,-183.5"/>
</g>
<!-- 49 -->
<g id="node50" class="node">
<title>49</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M748,-180C748,-180 664,-180 664,-180 658,-180 652,-174 652,-168 652,-168 652,-156 652,-156 652,-150 658,-144 664,-144 664,-144 748,-144 748,-144 754,-144 760,-150 760,-156 760,-156 760,-168 760,-168 760,-174 754,-180 748,-180"/>
<text text-anchor="middle" x="706" y="-159.5" font-family="sans" font-size="10.00">align_second_pass</text>
</g>
<!-- 22&#45;&gt;49 -->
<g id="edge76" class="edge">
<title>22&#45;&gt;49</title>
<path fill="none" stroke="grey" stroke-width="2" d="M280.54,-218.32C283.72,-217.46 286.9,-216.67 290,-216 441.02,-183.54 486.08,-207.6 641.9,-180.02"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="642.62,-183.44 651.83,-178.21 641.37,-176.56 642.62,-183.44"/>
</g>
<!-- 50 -->
<g id="node51" class="node">
<title>50</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M874,-180C874,-180 790,-180 790,-180 784,-180 778,-174 778,-168 778,-168 778,-156 778,-156 778,-150 784,-144 790,-144 790,-144 874,-144 874,-144 880,-144 886,-150 886,-156 886,-156 886,-168 886,-168 886,-174 880,-180 874,-180"/>
<text text-anchor="middle" x="832" y="-159.5" font-family="sans" font-size="10.00">align_second_pass</text>
</g>
<!-- 22&#45;&gt;50 -->
<g id="edge82" class="edge">
<title>22&#45;&gt;50</title>
<path fill="none" stroke="grey" stroke-width="2" d="M280.52,-218.23C283.7,-217.38 286.89,-216.63 290,-216 496.03,-174.58 556.67,-214.68 767.69,-180.02"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="768.57,-183.42 777.85,-178.31 767.41,-176.51 768.57,-183.42"/>
</g>
<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#56d863" stroke-width="2" d="M245,-324C245,-324 181,-324 181,-324 175,-324 169,-318 169,-312 169,-312 169,-300 169,-300 169,-294 175,-288 181,-288 181,-288 245,-288 245,-288 251,-288 257,-294 257,-300 257,-300 257,-312 257,-312 257,-318 251,-324 245,-324"/>
<text text-anchor="middle" x="213" y="-303.5" font-family="sans" font-size="10.00">filter_bam_file</text>
</g>
<!-- 23&#45;&gt;22 -->
<g id="edge34" class="edge">
<title>23&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M219.43,-287.7C222.36,-279.81 225.89,-270.3 229.14,-261.55"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="232.45,-262.7 232.65,-252.1 225.88,-260.26 232.45,-262.7"/>
</g>
<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M229,-396C229,-396 173,-396 173,-396 167,-396 161,-390 161,-384 161,-384 161,-372 161,-372 161,-366 167,-360 173,-360 173,-360 229,-360 229,-360 235,-360 241,-366 241,-372 241,-372 241,-384 241,-384 241,-390 235,-396 229,-396"/>
<text text-anchor="middle" x="201" y="-375.5" font-family="sans" font-size="10.00">tag_bam_file</text>
</g>
<!-- 24&#45;&gt;23 -->
<g id="edge35" class="edge">
<title>24&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M203.97,-359.7C205.29,-351.98 206.88,-342.71 208.35,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="211.83,-334.55 210.07,-324.1 204.93,-333.37 211.83,-334.55"/>
</g>
<!-- 25&#45;&gt;24 -->
<g id="edge36" class="edge">
<title>25&#45;&gt;24</title>
<path fill="none" stroke="grey" stroke-width="2" d="M132.49,-431.7C143.96,-422.88 158.06,-412.03 170.48,-402.47"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="172.97,-404.98 178.76,-396.1 168.7,-399.43 172.97,-404.98"/>
</g>
<!-- 26 -->
<g id="node27" class="node">
<title>26</title>
<path fill="none" stroke="#d88d56" stroke-width="2" d="M369.5,-252C369.5,-252 310.5,-252 310.5,-252 304.5,-252 298.5,-246 298.5,-240 298.5,-240 298.5,-228 298.5,-228 298.5,-222 304.5,-216 310.5,-216 310.5,-216 369.5,-216 369.5,-216 375.5,-216 381.5,-222 381.5,-228 381.5,-228 381.5,-240 381.5,-240 381.5,-246 375.5,-252 369.5,-252"/>
<text text-anchor="middle" x="340" y="-231.5" font-family="sans" font-size="10.00">bam_to_fastq</text>
</g>
<!-- 26&#45;&gt;21 -->
<g id="edge29" class="edge">
<title>26&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M306.24,-215.88C287.78,-206.51 264.72,-194.81 244.98,-184.8"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="246.39,-181.59 235.89,-180.19 243.22,-187.83 246.39,-181.59"/>
</g>
<!-- 26&#45;&gt;46 -->
<g id="edge59" class="edge">
<title>26&#45;&gt;46</title>
<path fill="none" stroke="grey" stroke-width="2" d="M337.03,-215.7C335.71,-207.98 334.12,-198.71 332.65,-190.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="336.07,-189.37 330.93,-180.1 329.17,-190.55 336.07,-189.37"/>
</g>
<!-- 26&#45;&gt;47 -->
<g id="edge65" class="edge">
<title>26&#45;&gt;47</title>
<path fill="none" stroke="grey" stroke-width="2" d="M367.89,-215.88C382.79,-206.72 401.33,-195.34 417.38,-185.48"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="419.31,-188.41 426.01,-180.19 415.65,-182.44 419.31,-188.41"/>
</g>
<!-- 26&#45;&gt;48 -->
<g id="edge71" class="edge">
<title>26&#45;&gt;48</title>
<path fill="none" stroke="grey" stroke-width="2" d="M381.7,-218.92C384.84,-217.91 387.97,-216.93 391,-216 414.37,-208.83 470.91,-193.05 516.1,-180.56"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="517.14,-183.91 525.84,-177.87 515.27,-177.16 517.14,-183.91"/>
</g>
<!-- 26&#45;&gt;49 -->
<g id="edge77" class="edge">
<title>26&#45;&gt;49</title>
<path fill="none" stroke="grey" stroke-width="2" d="M381.57,-218.46C384.74,-217.56 387.91,-216.73 391,-216 497.99,-190.74 530.36,-202.09 641.85,-180.08"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="642.7,-183.48 651.8,-178.07 641.31,-176.62 642.7,-183.48"/>
</g>
<!-- 26&#45;&gt;50 -->
<g id="edge83" class="edge">
<title>26&#45;&gt;50</title>
<path fill="none" stroke="grey" stroke-width="2" d="M381.54,-218.3C384.72,-217.44 387.9,-216.66 391,-216 552.89,-181.77 601.07,-208.98 767.73,-180.04"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="768.6,-183.44 777.84,-178.24 767.38,-176.54 768.6,-183.44"/>
</g>
<!-- 27 -->
<g id="node28" class="node">
<title>27</title>
<path fill="none" stroke="#56d863" stroke-width="2" d="M357,-324C357,-324 293,-324 293,-324 287,-324 281,-318 281,-312 281,-312 281,-300 281,-300 281,-294 287,-288 293,-288 293,-288 357,-288 357,-288 363,-288 369,-294 369,-300 369,-300 369,-312 369,-312 369,-318 363,-324 357,-324"/>
<text text-anchor="middle" x="325" y="-303.5" font-family="sans" font-size="10.00">filter_bam_file</text>
</g>
<!-- 27&#45;&gt;26 -->
<g id="edge38" class="edge">
<title>27&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M328.71,-287.7C330.36,-279.98 332.35,-270.71 334.19,-262.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="337.66,-262.62 336.33,-252.1 330.82,-261.15 337.66,-262.62"/>
</g>
<!-- 28 -->
<g id="node29" class="node">
<title>28</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M343,-396C343,-396 287,-396 287,-396 281,-396 275,-390 275,-384 275,-384 275,-372 275,-372 275,-366 281,-360 287,-360 287,-360 343,-360 343,-360 349,-360 355,-366 355,-372 355,-372 355,-384 355,-384 355,-390 349,-396 343,-396"/>
<text text-anchor="middle" x="315" y="-375.5" font-family="sans" font-size="10.00">tag_bam_file</text>
</g>
<!-- 28&#45;&gt;27 -->
<g id="edge39" class="edge">
<title>28&#45;&gt;27</title>
<path fill="none" stroke="grey" stroke-width="2" d="M317.47,-359.7C318.57,-351.98 319.9,-342.71 321.13,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="324.61,-334.5 322.56,-324.1 317.68,-333.51 324.61,-334.5"/>
</g>
<!-- 29&#45;&gt;28 -->
<g id="edge40" class="edge">
<title>29&#45;&gt;28</title>
<path fill="none" stroke="grey" stroke-width="2" d="M234.93,-431.88C248.66,-422.81 265.71,-411.55 280.54,-401.76"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="282.55,-404.62 288.97,-396.19 278.7,-398.78 282.55,-404.62"/>
</g>
<!-- 30 -->
<g id="node31" class="node">
<title>30</title>
<path fill="none" stroke="#d88d56" stroke-width="2" d="M470.5,-252C470.5,-252 411.5,-252 411.5,-252 405.5,-252 399.5,-246 399.5,-240 399.5,-240 399.5,-228 399.5,-228 399.5,-222 405.5,-216 411.5,-216 411.5,-216 470.5,-216 470.5,-216 476.5,-216 482.5,-222 482.5,-228 482.5,-228 482.5,-240 482.5,-240 482.5,-246 476.5,-252 470.5,-252"/>
<text text-anchor="middle" x="441" y="-231.5" font-family="sans" font-size="10.00">bam_to_fastq</text>
</g>
<!-- 30&#45;&gt;21 -->
<g id="edge30" class="edge">
<title>30&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M399.31,-218.64C396.51,-217.73 393.71,-216.84 391,-216 367.65,-208.76 311.11,-192.99 265.91,-180.52"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="266.74,-177.12 256.17,-177.84 264.88,-183.87 266.74,-177.12"/>
</g>
<!-- 30&#45;&gt;46 -->
<g id="edge60" class="edge">
<title>30&#45;&gt;46</title>
<path fill="none" stroke="grey" stroke-width="2" d="M413.36,-215.88C398.58,-206.72 380.21,-195.34 364.3,-185.48"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="366.09,-182.48 355.75,-180.19 362.41,-188.43 366.09,-182.48"/>
</g>
<!-- 30&#45;&gt;47 -->
<g id="edge66" class="edge">
<title>30&#45;&gt;47</title>
<path fill="none" stroke="grey" stroke-width="2" d="M444.21,-215.7C445.65,-207.98 447.37,-198.71 448.96,-190.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="452.44,-190.58 450.82,-180.1 445.56,-189.3 452.44,-190.58"/>
</g>
<!-- 30&#45;&gt;48 -->
<g id="edge72" class="edge">
<title>30&#45;&gt;48</title>
<path fill="none" stroke="grey" stroke-width="2" d="M475,-215.88C493.6,-206.51 516.83,-194.81 536.71,-184.8"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="538.51,-187.81 545.87,-180.19 535.36,-181.56 538.51,-187.81"/>
</g>
<!-- 30&#45;&gt;49 -->
<g id="edge78" class="edge">
<title>30&#45;&gt;49</title>
<path fill="none" stroke="grey" stroke-width="2" d="M482.66,-218.78C485.81,-217.81 488.95,-216.87 492,-216 555.36,-197.92 574.44,-197.03 641.88,-180.23"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="642.89,-183.59 651.73,-177.75 641.18,-176.8 642.89,-183.59"/>
</g>
<!-- 30&#45;&gt;50 -->
<g id="edge84" class="edge">
<title>30&#45;&gt;50</title>
<path fill="none" stroke="grey" stroke-width="2" d="M482.56,-218.42C485.74,-217.53 488.91,-216.71 492,-216 609.81,-188.97 645.37,-203.41 767.68,-180.1"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="768.67,-183.47 777.81,-178.12 767.33,-176.6 768.67,-183.47"/>
</g>
<!-- 31 -->
<g id="node32" class="node">
<title>31</title>
<path fill="none" stroke="#56d863" stroke-width="2" d="M466,-324C466,-324 402,-324 402,-324 396,-324 390,-318 390,-312 390,-312 390,-300 390,-300 390,-294 396,-288 402,-288 402,-288 466,-288 466,-288 472,-288 478,-294 478,-300 478,-300 478,-312 478,-312 478,-318 472,-324 466,-324"/>
<text text-anchor="middle" x="434" y="-303.5" font-family="sans" font-size="10.00">filter_bam_file</text>
</g>
<!-- 31&#45;&gt;30 -->
<g id="edge42" class="edge">
<title>31&#45;&gt;30</title>
<path fill="none" stroke="grey" stroke-width="2" d="M435.73,-287.7C436.5,-279.98 437.43,-270.71 438.29,-262.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="441.78,-262.4 439.29,-252.1 434.81,-261.71 441.78,-262.4"/>
</g>
<!-- 32 -->
<g id="node33" class="node">
<title>32</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M464,-396C464,-396 408,-396 408,-396 402,-396 396,-390 396,-384 396,-384 396,-372 396,-372 396,-366 402,-360 408,-360 408,-360 464,-360 464,-360 470,-360 476,-366 476,-372 476,-372 476,-384 476,-384 476,-390 470,-396 464,-396"/>
<text text-anchor="middle" x="436" y="-375.5" font-family="sans" font-size="10.00">tag_bam_file</text>
</g>
<!-- 32&#45;&gt;31 -->
<g id="edge43" class="edge">
<title>32&#45;&gt;31</title>
<path fill="none" stroke="grey" stroke-width="2" d="M435.51,-359.7C435.29,-351.98 435.02,-342.71 434.77,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="438.27,-334 434.49,-324.1 431.28,-334.2 438.27,-334"/>
</g>
<!-- 33&#45;&gt;32 -->
<g id="edge44" class="edge">
<title>33&#45;&gt;32</title>
<path fill="none" stroke="grey" stroke-width="2" d="M438.26,-431.7C437.93,-423.98 437.53,-414.71 437.16,-406.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="440.66,-405.95 436.73,-396.1 433.66,-406.25 440.66,-405.95"/>
</g>
<!-- 34 -->
<g id="node35" class="node">
<title>34</title>
<path fill="none" stroke="#d88d56" stroke-width="2" d="M571.5,-252C571.5,-252 512.5,-252 512.5,-252 506.5,-252 500.5,-246 500.5,-240 500.5,-240 500.5,-228 500.5,-228 500.5,-222 506.5,-216 512.5,-216 512.5,-216 571.5,-216 571.5,-216 577.5,-216 583.5,-222 583.5,-228 583.5,-228 583.5,-240 583.5,-240 583.5,-246 577.5,-252 571.5,-252"/>
<text text-anchor="middle" x="542" y="-231.5" font-family="sans" font-size="10.00">bam_to_fastq</text>
</g>
<!-- 34&#45;&gt;21 -->
<g id="edge31" class="edge">
<title>34&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M500.42,-218.27C497.58,-217.45 494.76,-216.68 492,-216 395.94,-192.24 366.71,-200.75 266.16,-180.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="266.71,-176.65 256.21,-178.02 265.27,-183.5 266.71,-176.65"/>
</g>
<!-- 34&#45;&gt;46 -->
<g id="edge61" class="edge">
<title>34&#45;&gt;46</title>
<path fill="none" stroke="grey" stroke-width="2" d="M500.27,-218.76C497.48,-217.82 494.7,-216.89 492,-216 458.81,-205 421.75,-192.99 391.27,-183.2"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="392.21,-179.83 381.62,-180.1 390.07,-186.49 392.21,-179.83"/>
</g>
<!-- 34&#45;&gt;47 -->
<g id="edge67" class="edge">
<title>34&#45;&gt;47</title>
<path fill="none" stroke="grey" stroke-width="2" d="M520.25,-215.7C509.16,-206.88 495.53,-196.03 483.51,-186.47"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="485.51,-183.59 475.5,-180.1 481.15,-189.07 485.51,-183.59"/>
</g>
<!-- 34&#45;&gt;48 -->
<g id="edge73" class="edge">
<title>34&#45;&gt;48</title>
<path fill="none" stroke="grey" stroke-width="2" d="M551.39,-215.7C555.76,-207.64 561.06,-197.89 565.9,-188.98"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="569.02,-190.56 570.71,-180.1 562.87,-187.22 569.02,-190.56"/>
</g>
<!-- 34&#45;&gt;49 -->
<g id="edge79" class="edge">
<title>34&#45;&gt;49</title>
<path fill="none" stroke="grey" stroke-width="2" d="M582.12,-215.88C604.64,-206.26 632.92,-194.19 656.77,-184.01"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="658.19,-187.21 666.01,-180.07 655.44,-180.77 658.19,-187.21"/>
</g>
<!-- 34&#45;&gt;50 -->
<g id="edge85" class="edge">
<title>34&#45;&gt;50</title>
<path fill="none" stroke="grey" stroke-width="2" d="M583.63,-218.67C586.78,-217.72 589.93,-216.82 593,-216 667.11,-196.15 689.57,-198.21 767.92,-180.17"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="768.82,-183.55 777.76,-177.86 767.22,-176.74 768.82,-183.55"/>
</g>
<!-- 35 -->
<g id="node36" class="node">
<title>35</title>
<path fill="none" stroke="#56d863" stroke-width="2" d="M572,-324C572,-324 508,-324 508,-324 502,-324 496,-318 496,-312 496,-312 496,-300 496,-300 496,-294 502,-288 508,-288 508,-288 572,-288 572,-288 578,-288 584,-294 584,-300 584,-300 584,-312 584,-312 584,-318 578,-324 572,-324"/>
<text text-anchor="middle" x="540" y="-303.5" font-family="sans" font-size="10.00">filter_bam_file</text>
</g>
<!-- 35&#45;&gt;34 -->
<g id="edge46" class="edge">
<title>35&#45;&gt;34</title>
<path fill="none" stroke="grey" stroke-width="2" d="M540.49,-287.7C540.71,-279.98 540.98,-270.71 541.23,-262.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="544.72,-262.2 541.51,-252.1 537.73,-262 544.72,-262.2"/>
</g>
<!-- 36 -->
<g id="node37" class="node">
<title>36</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M566,-396C566,-396 510,-396 510,-396 504,-396 498,-390 498,-384 498,-384 498,-372 498,-372 498,-366 504,-360 510,-360 510,-360 566,-360 566,-360 572,-360 578,-366 578,-372 578,-372 578,-384 578,-384 578,-390 572,-396 566,-396"/>
<text text-anchor="middle" x="538" y="-375.5" font-family="sans" font-size="10.00">tag_bam_file</text>
</g>
<!-- 36&#45;&gt;35 -->
<g id="edge47" class="edge">
<title>36&#45;&gt;35</title>
<path fill="none" stroke="grey" stroke-width="2" d="M538.49,-359.7C538.71,-351.98 538.98,-342.71 539.23,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="542.72,-334.2 539.51,-324.1 535.73,-334 542.72,-334.2"/>
</g>
<!-- 37&#45;&gt;36 -->
<g id="edge48" class="edge">
<title>37&#45;&gt;36</title>
<path fill="none" stroke="grey" stroke-width="2" d="M535.74,-431.7C536.07,-423.98 536.47,-414.71 536.84,-406.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="540.34,-406.25 537.27,-396.1 533.34,-405.95 540.34,-406.25"/>
</g>
<!-- 38 -->
<g id="node39" class="node">
<title>38</title>
<path fill="none" stroke="#d88d56" stroke-width="2" d="M672.5,-252C672.5,-252 613.5,-252 613.5,-252 607.5,-252 601.5,-246 601.5,-240 601.5,-240 601.5,-228 601.5,-228 601.5,-222 607.5,-216 613.5,-216 613.5,-216 672.5,-216 672.5,-216 678.5,-216 684.5,-222 684.5,-228 684.5,-228 684.5,-240 684.5,-240 684.5,-246 678.5,-252 672.5,-252"/>
<text text-anchor="middle" x="643" y="-231.5" font-family="sans" font-size="10.00">bam_to_fastq</text>
</g>
<!-- 38&#45;&gt;21 -->
<g id="edge32" class="edge">
<title>38&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M601.45,-218.12C598.61,-217.33 595.77,-216.62 593,-216 453.05,-184.92 410.99,-206.18 266.31,-180.06"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="266.64,-176.57 256.17,-178.19 265.37,-183.45 266.64,-176.57"/>
</g>
<!-- 38&#45;&gt;46 -->
<g id="edge62" class="edge">
<title>38&#45;&gt;46</title>
<path fill="none" stroke="grey" stroke-width="2" d="M601.4,-218.33C598.57,-217.5 595.75,-216.71 593,-216 507.71,-194.03 481.76,-199.48 392,-180.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="392.74,-176.69 382.22,-177.95 391.24,-183.52 392.74,-176.69"/>
</g>
<!-- 38&#45;&gt;47 -->
<g id="edge68" class="edge">
<title>38&#45;&gt;47</title>
<path fill="none" stroke="grey" stroke-width="2" d="M601.05,-217.46C574.19,-207.51 539,-194.48 509.79,-183.66"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="510.73,-180.28 500.13,-180.09 508.29,-186.84 510.73,-180.28"/>
</g>
<!-- 38&#45;&gt;48 -->
<g id="edge74" class="edge">
<title>38&#45;&gt;48</title>
<path fill="none" stroke="grey" stroke-width="2" d="M627.43,-215.7C619.8,-207.22 610.48,-196.86 602.12,-187.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="604.69,-185.2 595.39,-180.1 599.48,-189.88 604.69,-185.2"/>
</g>
<!-- 38&#45;&gt;49 -->
<g id="edge80" class="edge">
<title>38&#45;&gt;49</title>
<path fill="none" stroke="grey" stroke-width="2" d="M658.57,-215.7C666.2,-207.22 675.52,-196.86 683.88,-187.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="686.52,-189.88 690.61,-180.1 681.31,-185.2 686.52,-189.88"/>
</g>
<!-- 38&#45;&gt;50 -->
<g id="edge86" class="edge">
<title>38&#45;&gt;50</title>
<path fill="none" stroke="grey" stroke-width="2" d="M684.95,-217.46C711.81,-207.51 747,-194.48 776.21,-183.66"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="777.71,-186.84 785.87,-180.09 775.27,-180.28 777.71,-186.84"/>
</g>
<!-- 39 -->
<g id="node40" class="node">
<title>39</title>
<path fill="none" stroke="#56d863" stroke-width="2" d="M678,-324C678,-324 614,-324 614,-324 608,-324 602,-318 602,-312 602,-312 602,-300 602,-300 602,-294 608,-288 614,-288 614,-288 678,-288 678,-288 684,-288 690,-294 690,-300 690,-300 690,-312 690,-312 690,-318 684,-324 678,-324"/>
<text text-anchor="middle" x="646" y="-303.5" font-family="sans" font-size="10.00">filter_bam_file</text>
</g>
<!-- 39&#45;&gt;38 -->
<g id="edge50" class="edge">
<title>39&#45;&gt;38</title>
<path fill="none" stroke="grey" stroke-width="2" d="M645.26,-287.7C644.93,-279.98 644.53,-270.71 644.16,-262.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="647.66,-261.95 643.73,-252.1 640.66,-262.25 647.66,-261.95"/>
</g>
<!-- 40 -->
<g id="node41" class="node">
<title>40</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M672,-396C672,-396 616,-396 616,-396 610,-396 604,-390 604,-384 604,-384 604,-372 604,-372 604,-366 610,-360 616,-360 616,-360 672,-360 672,-360 678,-360 684,-366 684,-372 684,-372 684,-384 684,-384 684,-390 678,-396 672,-396"/>
<text text-anchor="middle" x="644" y="-375.5" font-family="sans" font-size="10.00">tag_bam_file</text>
</g>
<!-- 40&#45;&gt;39 -->
<g id="edge51" class="edge">
<title>40&#45;&gt;39</title>
<path fill="none" stroke="grey" stroke-width="2" d="M644.49,-359.7C644.71,-351.98 644.98,-342.71 645.23,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="648.72,-334.2 645.51,-324.1 641.73,-334 648.72,-334.2"/>
</g>
<!-- 41&#45;&gt;40 -->
<g id="edge52" class="edge">
<title>41&#45;&gt;40</title>
<path fill="none" stroke="grey" stroke-width="2" d="M644,-431.7C644,-423.98 644,-414.71 644,-406.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="647.5,-406.1 644,-396.1 640.5,-406.1 647.5,-406.1"/>
</g>
<!-- 42 -->
<g id="node43" class="node">
<title>42</title>
<path fill="none" stroke="#d88d56" stroke-width="2" d="M773.5,-252C773.5,-252 714.5,-252 714.5,-252 708.5,-252 702.5,-246 702.5,-240 702.5,-240 702.5,-228 702.5,-228 702.5,-222 708.5,-216 714.5,-216 714.5,-216 773.5,-216 773.5,-216 779.5,-216 785.5,-222 785.5,-228 785.5,-228 785.5,-240 785.5,-240 785.5,-246 779.5,-252 773.5,-252"/>
<text text-anchor="middle" x="744" y="-231.5" font-family="sans" font-size="10.00">bam_to_fastq</text>
</g>
<!-- 42&#45;&gt;21 -->
<g id="edge33" class="edge">
<title>42&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M702.47,-218.03C699.62,-217.27 696.78,-216.58 694,-216 509.9,-177.58 455.32,-211.84 266.15,-180"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="266.61,-176.53 256.16,-178.28 265.42,-183.42 266.61,-176.53"/>
</g>
<!-- 42&#45;&gt;46 -->
<g id="edge63" class="edge">
<title>42&#45;&gt;46</title>
<path fill="none" stroke="grey" stroke-width="2" d="M702.45,-218.14C699.61,-217.35 696.77,-216.63 694,-216 564.97,-186.74 526.04,-204.8 392.39,-180.09"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="392.66,-176.58 382.18,-178.16 391.35,-183.46 392.66,-176.58"/>
</g>
<!-- 42&#45;&gt;47 -->
<g id="edge69" class="edge">
<title>42&#45;&gt;47</title>
<path fill="none" stroke="grey" stroke-width="2" d="M702.38,-218.41C699.56,-217.55 696.74,-216.74 694,-216 619.54,-195.86 596.88,-198.24 518.13,-180.18"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="518.77,-176.73 508.24,-177.87 517.18,-183.55 518.77,-176.73"/>
</g>
<!-- 42&#45;&gt;48 -->
<g id="edge75" class="edge">
<title>42&#45;&gt;48</title>
<path fill="none" stroke="grey" stroke-width="2" d="M703.88,-215.88C681.36,-206.26 653.08,-194.19 629.23,-184.01"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="630.56,-180.77 619.99,-180.07 627.81,-187.21 630.56,-180.77"/>
</g>
<!-- 42&#45;&gt;49 -->
<g id="edge81" class="edge">
<title>42&#45;&gt;49</title>
<path fill="none" stroke="grey" stroke-width="2" d="M734.61,-215.7C730.24,-207.64 724.94,-197.89 720.1,-188.98"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="723.13,-187.22 715.29,-180.1 716.98,-190.56 723.13,-187.22"/>
</g>
<!-- 42&#45;&gt;50 -->
<g id="edge87" class="edge">
<title>42&#45;&gt;50</title>
<path fill="none" stroke="grey" stroke-width="2" d="M765.75,-215.7C776.84,-206.88 790.47,-196.03 802.49,-186.47"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="804.85,-189.07 810.5,-180.1 800.49,-183.59 804.85,-189.07"/>
</g>
<!-- 43 -->
<g id="node44" class="node">
<title>43</title>
<path fill="none" stroke="#56d863" stroke-width="2" d="M785,-324C785,-324 721,-324 721,-324 715,-324 709,-318 709,-312 709,-312 709,-300 709,-300 709,-294 715,-288 721,-288 721,-288 785,-288 785,-288 791,-288 797,-294 797,-300 797,-300 797,-312 797,-312 797,-318 791,-324 785,-324"/>
<text text-anchor="middle" x="753" y="-303.5" font-family="sans" font-size="10.00">filter_bam_file</text>
</g>
<!-- 43&#45;&gt;42 -->
<g id="edge54" class="edge">
<title>43&#45;&gt;42</title>
<path fill="none" stroke="grey" stroke-width="2" d="M750.78,-287.7C749.78,-279.98 748.59,-270.71 747.49,-262.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="750.95,-261.58 746.2,-252.1 744,-262.47 750.95,-261.58"/>
</g>
<!-- 44 -->
<g id="node45" class="node">
<title>44</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M782,-396C782,-396 726,-396 726,-396 720,-396 714,-390 714,-384 714,-384 714,-372 714,-372 714,-366 720,-360 726,-360 726,-360 782,-360 782,-360 788,-360 794,-366 794,-372 794,-372 794,-384 794,-384 794,-390 788,-396 782,-396"/>
<text text-anchor="middle" x="754" y="-375.5" font-family="sans" font-size="10.00">tag_bam_file</text>
</g>
<!-- 44&#45;&gt;43 -->
<g id="edge55" class="edge">
<title>44&#45;&gt;43</title>
<path fill="none" stroke="grey" stroke-width="2" d="M753.75,-359.7C753.64,-351.98 753.51,-342.71 753.39,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="756.89,-334.05 753.24,-324.1 749.89,-334.15 756.89,-334.05"/>
</g>
<!-- 45&#45;&gt;44 -->
<g id="edge56" class="edge">
<title>45&#45;&gt;44</title>
<path fill="none" stroke="grey" stroke-width="2" d="M754,-431.7C754,-423.98 754,-414.71 754,-406.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="757.5,-406.1 754,-396.1 750.5,-406.1 757.5,-406.1"/>
</g>
<!-- 46&#45;&gt;20 -->
<g id="edge22" class="edge">
<title>46&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M343.57,-143.7C351.2,-135.22 360.52,-124.86 368.88,-115.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="371.52,-117.88 375.61,-108.1 366.31,-113.2 371.52,-117.88"/>
</g>
<!-- 47&#45;&gt;20 -->
<g id="edge23" class="edge">
<title>47&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M438.43,-143.7C430.8,-135.22 421.48,-124.86 413.12,-115.58"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="415.69,-113.2 406.39,-108.1 410.48,-117.88 415.69,-113.2"/>
</g>
<!-- 48&#45;&gt;20 -->
<g id="edge24" class="edge">
<title>48&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M533.77,-143.88C505.68,-133.48 469.83,-120.2 441.08,-109.55"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="442.22,-106.24 431.62,-106.05 439.79,-112.8 442.22,-106.24"/>
</g>
<!-- 49&#45;&gt;20 -->
<g id="edge25" class="edge">
<title>49&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M651.75,-146.15C648.8,-145.41 645.86,-144.69 643,-144 573.65,-127.37 492.89,-110.88 441.86,-100.82"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="442.24,-97.33 431.75,-98.84 440.89,-104.2 442.24,-97.33"/>
</g>
<!-- 50&#45;&gt;20 -->
<g id="edge26" class="edge">
<title>50&#45;&gt;20</title>
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