ilamb task require atmosphere time series files as a dependency

[chengzhuzhang]

What happened?

With this configuration file provided by #549 (comment), I got ilamb jobs skipped, because ts_atm_monthly_180x360_aave_1850-1851-0002.status status files are missing. By including an atm ts task would bypass this error. But Ilamb run should not require atm variables.

Configuration file validation passed.
ts_land_monthly_1850-1851-0002
...Submitted batch job 474065
ts_land_monthly_1852-1853-0002
...Submitted batch job 474066
ilamb_1850-1851
...skipping because of dependency status file missing
   /lcrc/group/e3sm/ac.zhang40/zppy_test_complete_run_output/test-main2-20240216/v2.LR.historical_0201_try4/post/scripts/ts_atm_monthly_180x360_aave_1850-1851-0002.status
URL: https://web.lcrc.anl.gov/public/e3sm/diagnostic_output/ac.zhang40/zppy_test_complete_run_www/try4/v2.LR.historical_0201/ilamb
ilamb_1852-1853
...skipping because of dependency status file missing
   /lcrc/group/e3sm/ac.zhang40/zppy_test_complete_run_output/test-main2-20240216/v2.LR.historical_0201_try4/post/scripts/ts_atm_monthly_180x360_aave_1850-1851-0002.status
URL: https://web.lcrc.anl.gov/public/e3sm/diagnostic_output/ac.zhang40/zppy_test_complete_run_www/try4/v2.LR.historical_0201/ilamb

What machine were you running on?

Chrysalis

Environment

e3sm_unified 1.9.2

What command did you run?

zppy -c test.cfg

Copy your cfg file

[default]
case = v2.LR.historical_0201
constraint = ""
#dry_run = True
debug = False
environment_commands = "source /lcrc/soft/climate/e3sm-unified/load_latest_e3sm_unified_chrysalis.sh"
input = "/lcrc/group/e3sm/ac.forsyth2//E3SMv2/v2.LR.historical_0201"
input_subdir = archive/atm/hist
mapping_file = "map_ne30pg2_to_cmip6_180x360_aave.20200201.nc"
# To run this test, edit `output` and `www` in this file, along with `actual_images_dir` in test_complete_run.py
output = "/lcrc/group/e3sm/ac.zhang40/zppy_test_complete_run_output/test-main2-20240216/v2.LR.historical_0201_try4"
partition = "debug"
qos = "regular"
www = "/lcrc/group/e3sm/public_html/diagnostic_output/ac.zhang40/zppy_test_complete_run_www/try4"

[ts]
active = True
walltime = "00:30:00"
years = "1850:1854:2",

  [[ land_monthly ]]
  extra_vars = "landfrac"
  frequency = "monthly"
  input_files = "elm.h0"
  input_subdir = "archive/lnd/hist"
  vars = "FSH,RH2M"
  ts_fmt = "cmip"

[ilamb]
active = True
grid = '180x360_aave'
short_name = 'v2.LR.historical_0201'
ts_num_years = 2
years = "1850:1854:2",

What jobs are failing?

No response

What stack trace are you encountering?

No response

[chengzhuzhang]

Actually, this can be bypassed by add land_only=True in [ilamb] config.

ex.

[ilamb]
active = True
grid = '180x360_aave'
short_name = 'v2.LR.historical_0201'
ts_num_years = 2
years = "1850:1854:2",
land_only = True

[BunnyVon]

@chengzhuzhang @forsyth2, ilamb is a land diagnostic package. the following two lines seem not necessary. Or, we can change the default of land_only to true.

ts_atm_subsection = string(default="atm_monthly_180x360_aave")
ts_atm_grid = string(default="180x360_aave")