From f986eb2cecbe5534210aa8a9ea09629cfc296064 Mon Sep 17 00:00:00 2001 From: TuomasBorman <60338854+TuomasBorman@users.noreply.github.com> Date: Mon, 26 Feb 2024 12:55:50 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20EBI-Meta?= =?UTF-8?q?genomics/MGnifyR@8224063c4dc52c189cc5ea3494e9a2d577c2c8bc=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/MGnifyR.html | 4 ++-- articles/MGnifyR_long.html | 4 ++-- articles/index.html | 2 +- authors.html | 6 +++--- index.html | 2 +- pkgdown.yml | 2 +- .../analyses/MGYA00377505_format_json/.RDS | Bin 1041 -> 1032 bytes .../samples/ERS2967391_format_json/.RDS | Bin 1043 -> 1041 bytes .../studies/MGYS00005058_format_json/.RDS | Bin 817 -> 818 bytes reference/MGnifyR-package.html | 2 +- reference/MgnifyClient-accessors.html | 2 +- reference/MgnifyClient.html | 2 +- reference/deprecate.html | 2 +- reference/doQuery.html | 2 +- reference/getData.html | 2 +- reference/getFile.html | 2 +- reference/getMetadata.html | 2 +- reference/getResult.html | 2 +- reference/index.html | 2 +- reference/searchAnalysis.html | 2 +- 22 files changed, 23 insertions(+), 23 deletions(-) diff --git a/404.html b/404.html index 1798726..4209c42 100644 --- a/404.html +++ b/404.html @@ -32,7 +32,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/LICENSE-text.html b/LICENSE-text.html index 33ba4c6..4d4839e 100644 --- a/LICENSE-text.html +++ b/LICENSE-text.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/articles/MGnifyR.html b/articles/MGnifyR.html index 8d9fd01..8c009d0 100644 --- a/articles/MGnifyR.html +++ b/articles/MGnifyR.html @@ -33,7 +33,7 @@ MGnifyR - 0.99.19 + 0.99.20 @@ -971,7 +971,7 @@

Fetch sequence files#> other attached packages: #> [1] miaViz_1.11.0 ggraph_2.1.0 #> [3] scater_1.31.2 ggplot2_3.5.0 -#> [5] scuttle_1.13.0 MGnifyR_0.99.19 +#> [5] scuttle_1.13.0 MGnifyR_0.99.20 #> [7] biomformat_1.31.0 mia_1.11.1 #> [9] MultiAssayExperiment_1.29.1 TreeSummarizedExperiment_2.11.0 #> [11] Biostrings_2.71.2 XVector_0.43.1 diff --git a/articles/MGnifyR_long.html b/articles/MGnifyR_long.html index 9bed733..53f6531 100644 --- a/articles/MGnifyR_long.html +++ b/articles/MGnifyR_long.html @@ -33,7 +33,7 @@ MGnifyR - 0.99.19 + 0.99.20 @@ -1576,7 +1576,7 @@

Fetch sequence files#> other attached packages: #> [1] miaViz_1.11.0 ggraph_2.1.0 #> [3] scater_1.31.2 ggplot2_3.5.0 -#> [5] scuttle_1.13.0 MGnifyR_0.99.19 +#> [5] scuttle_1.13.0 MGnifyR_0.99.20 #> [7] biomformat_1.31.0 mia_1.11.1 #> [9] MultiAssayExperiment_1.29.1 TreeSummarizedExperiment_2.11.0 #> [11] Biostrings_2.71.2 XVector_0.43.1 diff --git a/articles/index.html b/articles/index.html index 291467e..1a92b89 100644 --- a/articles/index.html +++ b/articles/index.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/authors.html b/authors.html index d22b582..a8fba94 100644 --- a/authors.html +++ b/authors.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 @@ -81,13 +81,13 @@

Citation

Borman T, Allen B, Lahti L (2024). MGnifyR: R interface to EBI MGnify metagenomics resource. -R package version 0.99.19, https://github.com/EBI-Metagenomics/MGnifyR. +R package version 0.99.20, https://github.com/EBI-Metagenomics/MGnifyR. 

@Manual{,
   title = {MGnifyR: R interface to EBI MGnify metagenomics resource},
   author = {Tuomas Borman and Ben Allen and Leo Lahti},
   year = {2024},
-  note = {R package version 0.99.19},
+  note = {R package version 0.99.20},
   url = {https://github.com/EBI-Metagenomics/MGnifyR},
 }
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b/reference/MGnifyR-package.html @@ -22,7 +22,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/MgnifyClient-accessors.html b/reference/MgnifyClient-accessors.html index 48f16c1..f48bbef 100644 --- a/reference/MgnifyClient-accessors.html +++ b/reference/MgnifyClient-accessors.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/MgnifyClient.html b/reference/MgnifyClient.html index baacd9a..af38924 100644 --- a/reference/MgnifyClient.html +++ b/reference/MgnifyClient.html @@ -21,7 +21,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/deprecate.html b/reference/deprecate.html index 2f9e5f9..51f55d4 100644 --- a/reference/deprecate.html +++ b/reference/deprecate.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/doQuery.html b/reference/doQuery.html index 616d7e6..fa35fbd 100644 --- a/reference/doQuery.html +++ b/reference/doQuery.html @@ -20,7 +20,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/getData.html b/reference/getData.html index 65e7e6a..4cd1bcd 100644 --- a/reference/getData.html +++ b/reference/getData.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/getFile.html b/reference/getFile.html index a5d4af8..a97bcc0 100644 --- a/reference/getFile.html +++ b/reference/getFile.html @@ -21,7 +21,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/getMetadata.html b/reference/getMetadata.html index f20eb69..4352da2 100644 --- a/reference/getMetadata.html +++ b/reference/getMetadata.html @@ -20,7 +20,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/getResult.html b/reference/getResult.html index cee69aa..2371463 100644 --- a/reference/getResult.html +++ b/reference/getResult.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/index.html b/reference/index.html index acaad27..ba1edb1 100644 --- a/reference/index.html +++ b/reference/index.html @@ -17,7 +17,7 @@ MGnifyR - 0.99.19 + 0.99.20 diff --git a/reference/searchAnalysis.html 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