-MGnifyR
MGnifyR 
+
An R package for searching and retrieving data from the EBI Metagenomics resource. In most cases, MGnifyR interacts directly with the JSONAPI, rather than relying on downloading analyses outputs as TSV files. Thus it is more general - allowing for example the intuitive combining of multiple studies and analyses into a single workflow, but is in some cases slower than the afformentioned direct access. Local caching of results on disk is implemented to help counter some of the overheads, but data downloads can be slow - particularly for functional annotation retrieval.
MGnifyR package is part of miaverse microbiome analysis ecosystem enabling usage of mia and other miaverse packages.
diff --git a/pkgdown.yml b/pkgdown.yml index c990ca03..b3b1220f 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -4,5 +4,5 @@ pkgdown_sha: ~ articles: MGnifyR: MGnifyR.html MGnifyR_long: MGnifyR_long.html -last_built: 2024-03-08T13:13Z +last_built: 2024-03-08T13:31Z diff --git a/reference/figures/mgnify_logo.jpg b/reference/figures/mgnify_logo.jpg new file mode 100644 index 00000000..845b1fcd Binary files /dev/null and b/reference/figures/mgnify_logo.jpg differ