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Bug in new anomeric linkage creation on test #229

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gitoliver opened this issue Mar 5, 2025 · 0 comments
Open

Bug in new anomeric linkage creation on test #229

gitoliver opened this issue Mar 5, 2025 · 0 comments
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bug Something isn't working LiveTest deployment All deployments start off as LiveTest

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@gitoliver
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https://jam.dev/c/487fa119-898a-4c97-8ba0-059ccbec3c78

Two bugs with test:

The string being injected for DGlcpAb is fine normally, but when it's being added as a replacement for the aglycone, the p and A get swapped so you get
DGlcpb1-1DGlcApb and not the correct:
DGlcpb1-1DGlcpAb

Bug 2 is that the error isn't as good on test as it is on glycam.org. On test you get:
Message: Error in evaluate sequence: 'dict' object has no attribute 'project'
On actual you get the much better:

Code: 400
Brief: InvalidInputPayload
Messaging Entity: CommonServicer
Scope: Transaction
Message: Cannot create 3D structure as no GLYCAM residue code was found in the GMML metadata for residue: DGlcApb

@gitoliver gitoliver added bug Something isn't working LiveTest deployment All deployments start off as LiveTest labels Mar 5, 2025
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