NAMESPACE

# Generated by roxygen2: do not edit by hand

export(create_differential_topology)
export(differentiationTest)
export(imbalance_score)
export(merge_sds)
export(progressionTest)
export(topologyTest)
export(weights_from_pst)
exportMethods(fateSelectionTest)
exportMethods(fateSelectionTest_multipleSamples)
exportMethods(imbalance_score)
exportMethods(nLineages)
exportMethods(progressionTest)
exportMethods(progressionTest_multipleSamples)
exportMethods(slingshot_conditions)
exportMethods(topologyTest)
exportMethods(topologyTest_multipleSamples)
exportMethods(weights_from_pst)
import(methods)
import(slingshot)
importClassesFrom(SingleCellExperiment,SingleCellExperiment)
importClassesFrom(TrajectoryUtils,PseudotimeOrdering)
importClassesFrom(slingshot,SlingshotDataSet)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(Ecume,classifier_test)
importFrom(Ecume,ks_test)
importFrom(Ecume,mmd_test)
importFrom(Ecume,stouffer_zscore)
importFrom(Ecume,wasserstein_permut)
importFrom(RANN,nn2)
importFrom(SingleCellExperiment,reducedDims)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,colData)
importFrom(distinct,distinct_test)
importFrom(dplyr,across)
importFrom(dplyr,bind_rows)
importFrom(dplyr,distinct)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,n_distinct)
importFrom(dplyr,select)
importFrom(dplyr,starts_with)
importFrom(dplyr,summarize)
importFrom(igraph,delete_vertices)
importFrom(magrittr,"%>%")
importFrom(matrixStats,rowMaxs)
importFrom(matrixStats,rowMins)
importFrom(mgcv,gam)
importFrom(mgcv,predict.gam)
importFrom(pbapply,pblapply)
importFrom(slingshot,SlingshotDataSet)
importFrom(slingshot,as.PseudotimeOrdering)
importFrom(slingshot,getCurves)
importFrom(slingshot,slingClusterLabels)
importFrom(slingshot,slingCurveWeights)
importFrom(slingshot,slingLineages)
importFrom(slingshot,slingMST)
importFrom(slingshot,slingPseudotime)
importFrom(slingshot,slingshot)
importFrom(stats,as.formula)
importFrom(stats,dmultinom)
importFrom(stats,model.matrix)
importFrom(stats,pnorm)
importFrom(stats,qnorm)
importFrom(stats,rbinom)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,weighted.mean)
importFrom(utils,combn)
importFrom(utils,tail)