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lrgasp-tools ambiguous output #35

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julienlag opened this issue Sep 13, 2021 · 1 comment
Open

lrgasp-tools ambiguous output #35

julienlag opened this issue Sep 13, 2021 · 1 comment
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@julienlag
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I installed lrgasp-tools and ran:
lrgasp-validate-models models.gtf.gz on one of my files. The command terminated without printing anything.
It's not very clear what the expected output is. Does absence of output mean valid file?
Same happens with
lrgasp-validate-read-model-map --models_gtf models.gtf.gz read_model_map.tsv.gz

@julienlag
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Yes, confirmed with @diekhans that validation scripts exit quietly when no errors are detected

@diekhans diekhans self-assigned this Sep 19, 2021
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