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modules.json
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{
"name": "Computational-Biology-OceanOmics/OceanGenomes-refgenomes",
"homePage": "https://github.com/Computational-Biology-OceanOmics/OceanGenomes-refgenomes",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bedtools/genomecov": {
"branch": "master",
"git_sha": "9ba6b02bbcb322ff4265cc51fca0ee5d8420b929",
"installed_by": ["modules"]
},
"busco/busco": {
"branch": "master",
"git_sha": "17486961b8b1ab1aae258c83a7e947b40d8ab670",
"installed_by": ["modules"]
},
"busco/generateplot": {
"branch": "master",
"git_sha": "1fab6356ab837d90e9be9636dd7e7713a68dbf7b",
"installed_by": ["modules"]
},
"bwa/index": {
"branch": "master",
"git_sha": "6278bf9afd4a4b2d00fa6052250e73da3d91546f",
"installed_by": ["modules"]
},
"bwa/mem": {
"branch": "master",
"git_sha": "b97197968ac12dde2463fa54541f6350c46f2035",
"installed_by": ["modules"]
},
"cat/fastq": {
"branch": "master",
"git_sha": "1ceaa8ba4d0fd886dbca0e545815d905b7407de7",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "f4ae1d942bd50c5c0b9bd2de1393ce38315ba57c",
"installed_by": ["modules"]
},
"fcs/fcsgx": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"genomescope2": {
"branch": "master",
"git_sha": "c95215baf20e6d8cf2ae0e8411d03c5d9ef21d4a",
"installed_by": ["modules"]
},
"gfastats": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"hifiasm": {
"branch": "master",
"git_sha": "aecb06fcdb995ff3e3df7c7a1fd119367d6d1996",
"installed_by": ["modules"]
},
"merqury": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"meryl/count": {
"branch": "master",
"git_sha": "c95215baf20e6d8cf2ae0e8411d03c5d9ef21d4a",
"installed_by": ["modules"]
},
"meryl/histogram": {
"branch": "master",
"git_sha": "c95215baf20e6d8cf2ae0e8411d03c5d9ef21d4a",
"installed_by": ["modules"]
},
"minimap2/align": {
"branch": "master",
"git_sha": "a33ef9475558c6b8da08c5f522ddaca1ec810306",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "b7ebe95761cd389603f9cc0e0dc384c0f663815a",
"installed_by": ["modules"]
},
"pairtools/dedup": {
"branch": "master",
"git_sha": "500d9eaad96739d5f4c9b839944f4a3500ec7540",
"installed_by": ["modules"]
},
"pairtools/parse": {
"branch": "master",
"git_sha": "9745b380c85528dba913f0fc1483b1f12a0d7941",
"installed_by": ["modules"]
},
"pairtools/sort": {
"branch": "master",
"git_sha": "c5fa7d50a536c46da1d7333d9251deade2ba0827",
"installed_by": ["modules"]
},
"pretextmap": {
"branch": "master",
"git_sha": "90b63cde0f838ca4da3a88a37a5309888cae97b9",
"installed_by": ["modules"]
},
"pretextsnapshot": {
"branch": "master",
"git_sha": "b119603b5ebefa3075cfa513d1d91b1dc875a679",
"installed_by": ["modules"]
},
"samtools/faidx": {
"branch": "master",
"git_sha": "f153f1f10e1083c49935565844cccb7453021682",
"installed_by": ["modules"]
},
"samtools/index": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": ["modules"]
},
"samtools/sort": {
"branch": "master",
"git_sha": "4352dbdb09ec40db71e9b172b97a01dcf5622c26",
"installed_by": ["modules"]
},
"tiara/tiara": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"tidk/explore": {
"branch": "master",
"git_sha": "06a7b9319c2e3e76d39e356571d0e34af7a746ac",
"installed_by": ["modules"]
},
"yahs": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"utils_nfvalidation_plugin": {
"branch": "master",
"git_sha": "f533459a222ac53eb4c6bb7a5f574e4069197cdb",
"installed_by": ["subworkflows"]
}
}
}
}
}
}