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fails with the following error message on an ARM based MacOS running R 4.4.1.
The downloaded source packages are in
‘/private/var/folders/81/d9jch6jj21z6tg8dndtgpry00000gn/T/RtmpJdyGQX/downloaded_packages’
── R CMD build ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file ‘/private/var/folders/81/d9jch6jj21z6tg8dndtgpry00000gn/T/RtmpJdyGQX/remotes1273dfd4c40/PNNL-CompBio-spammR-0382c94/DESCRIPTION’ ...
─ preparing ‘spammR’:
✔ checking DESCRIPTION meta-information
─ installing the package to build vignettes
E creating vignettes (16.4s)
--- re-building ‘spammR.Rmd’ using rmarkdown
Error: processing vignette 'spammR.Rmd' failed with diagnostics:
there is no package called ‘BiocStyle’
--- failed re-building ‘spammR.Rmd’
SUMMARY: processing the following file failed:
‘spammR.Rmd’
Error: Vignette re-building failed.
Execution halted
Error: Failed to install 'spammR' from GitHub:
! System command 'R' failed
After manually installing BiocStyle via BiocManager::install('BiocStyle') the installation is successful granted all other dependencies stated in the installation routine are satisfied.
The text was updated successfully, but these errors were encountered:
On a fresh install the installation via
fails with the following error message on an ARM based MacOS running R 4.4.1.
After manually installing
BiocStyle
viaBiocManager::install('BiocStyle')
the installation is successful granted all other dependencies stated in the installation routine are satisfied.The text was updated successfully, but these errors were encountered: