From bd2104e8aa6e2569dda339f739928f2cd2479222 Mon Sep 17 00:00:00 2001 From: bnbailey-psl Date: Fri, 17 Jan 2025 15:57:14 -0800 Subject: [PATCH] [1.3.26] 2025-01-17 *Context* - Definition of global PI_F variable in global.h was causing a build issue on some compilers *Visualizer* - Added mouse-based camera controls in the interactive visualizer. Credit to Sean Banks for this update. *Plant Architecture* - Added methods for querying bulk properties of a plant (total leaf count, stem height, plant height, leaf angle distribution) and write plant mesh vertices to file. 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doc/html/whitespruce_8cpp_source.html | 81 +- .../doc/PlantArchitecture.dox | 2 +- .../include/PlantArchitecture.h | 37 + .../src/PlantArchitecture.cpp | 119 +- plugins/radiation/doc/Radiation.dox | 2 +- plugins/visualizer/doc/Visualizer.dox | 141 +- plugins/visualizer/include/Visualizer.h | 11 + plugins/visualizer/src/Visualizer.cpp | 90 +- 859 files changed, 40818 insertions(+), 33887 deletions(-) delete mode 100644 doc/html/bdwn.png create mode 100644 doc/html/clipboard.js create mode 100644 doc/html/cookie.js delete mode 100644 doc/html/doc.png create mode 100644 doc/html/doc.svg delete mode 100644 doc/html/docd.png create mode 100644 doc/html/docd.svg create mode 100644 doc/html/doxygen_crawl.html delete mode 100644 doc/html/folderclosed.png create mode 100644 doc/html/folderclosed.svg create mode 100644 doc/html/folderclosedd.svg delete mode 100644 doc/html/folderopen.png create mode 100644 doc/html/folderopen.svg create mode 100644 doc/html/folderopend.svg create mode 100644 doc/html/minus.svg create mode 100644 doc/html/minusd.svg delete mode 100644 doc/html/modules.html create mode 100644 doc/html/navtree.css create mode 100644 doc/html/plus.svg create mode 100644 doc/html/plusd.svg create mode 100644 doc/html/resize.js create mode 100644 doc/html/search/all_1b.js create mode 100644 doc/html/search/all_1c.js create mode 100644 doc/html/search/all_1d.js create mode 100644 doc/html/search/all_1e.js create mode 100644 doc/html/search/all_1f.js create mode 100644 doc/html/search/all_20.js create mode 100644 doc/html/search/all_21.js create mode 100644 doc/html/search/all_22.js create mode 100644 doc/html/search/all_23.js create mode 100644 doc/html/search/groups_5.js create mode 100644 doc/html/search/groups_6.js create mode 100644 doc/html/search/groups_7.js create mode 100644 doc/html/search/pages_12.js create mode 100644 doc/html/search/pages_13.js create mode 100644 doc/html/search/pages_14.js create mode 100644 doc/html/search/pages_15.js create mode 100644 doc/html/search/pages_16.js create mode 100644 doc/html/search/pages_17.js create mode 100644 doc/html/search/pages_18.js create mode 100644 doc/html/search/pages_19.js create mode 100644 doc/html/search/pages_1a.js diff --git a/core/include/global.h b/core/include/global.h index 0e9ec482a..ed9021dca 100755 --- a/core/include/global.h +++ b/core/include/global.h @@ -26,11 +26,11 @@ #define M_PI 3.14159265358979323846 #endif -inline constexpr float PI_F = 3.14159265358979323846f; - #ifndef HELIOS_GLOBAL #define HELIOS_GLOBAL +constexpr float PI_F = 3.14159265358979323846f; + #include #include #include diff --git a/doc/CHANGELOG b/doc/CHANGELOG index 466ee1f1b..88774f353 100644 --- a/doc/CHANGELOG +++ b/doc/CHANGELOG @@ -2012,4 +2012,15 @@ The radiation model has been re-designed, with the following primary additions: - All output messages were not being properly suppressed after calling disableOutputMessages(). *Canopy Generator* -- Many edits made regarding how parameters with random variation are handled, mainly to ensure proper constraints on values (e.g., always positive). \ No newline at end of file +- Many edits made regarding how parameters with random variation are handled, mainly to ensure proper constraints on values (e.g., always positive). + +[1.3.26] 2025-01-17 + +*Context* +- Definition of global PI_F variable in global.h was causing a build issue on some compilers + +*Visualizer* +- Added mouse-based camera controls in the interactive visualizer. Credit to Sean Banks for this update. + +*Plant Architecture* +- Added methods for querying bulk properties of a plant (total leaf count, stem height, plant height, leaf angle distribution) and write plant mesh vertices to file. \ No newline at end of file diff --git a/doc/UserGuide.dox b/doc/UserGuide.dox index e7030f052..b8ef1ad7e 100755 --- a/doc/UserGuide.dox +++ b/doc/UserGuide.dox @@ -1,4 +1,4 @@ -/*! \mainpage Helios Documentation v1.3.25 +/*! \mainpage Helios Documentation v1.3.26


@@ -537,8 +537,8 @@ $ git pull Note that the above colors can be directly passed to \ref helios::make_RGBAcolor() "make_RGBAcolor" to specify an alpha (transparency) value: ~~~~~~{.cpp} - RGBAcolor red_trans = make_RGBAcolor( RGB::red, 0.5 ); - ~~~~~~ + RGBAcolor red_trans = make_RGBAcolor( RGB::red, 0.5 ); + ~~~~~~ \section Coord Coordinate System diff --git a/doc/header.html b/doc/header.html index d7f03827b..b4e095298 100644 --- a/doc/header.html +++ b/doc/header.html @@ -40,7 +40,7 @@ Logo -
 v1.3.25 +
 v1.3.26
diff --git a/doc/html/_a_p_i.html b/doc/html/_a_p_i.html index 2dff3dc9d..ee6e626ad 100644 --- a/doc/html/_a_p_i.html +++ b/doc/html/_a_p_i.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
User/API Guide
+
User/API Guide

Table of Contents

-

@@ -161,7 +242,7 @@

It is generally convenient to have a separate directory in which the project is built. This makes it easy to start fresh with a new build, or create multiple builds on different systems. Usually, the build directory is a subdirectory within the project directory (see 'samples' directory for examples).

Main and auxiliary .cpp files

-

Projects using the Helios API must have a file containing a main() program, and can have any number of complimentary routines and files. Generally, the file containing the main program will include the Context.h header file, and declare the Context class (see Sect. Context below).

+

Projects using the Helios API must have a file containing a main() program, and can have any number of complimentary routines and files. Generally, the file containing the main program will include the Context.h header file, and declare the Context class (see Sect. Context below).

CMakeLists.txt File

Projects that use the Helios API are typically built using the CMake package a CMakeLists.txt file. Helios requires CMake version 3.15+. A prototypical CMakeLists.txt file used for building Helios samples and projects is given in the code sample below. Inputs for the specific case are entered in the top block of code by setting variables (see the CMake 'set' command reference). The user sets the location of the Helios base directory, the name of the executable file, any source or header files, and a list of plug-ins to use (the example below uses the 'visualizer' plug-in). The last line in the file references another file in the core/ directory that contains additional code for setting up the project.

@@ -275,7 +356,7 @@

int main(){
Context context;
}
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882

The Context is usually passed to plugins (see Writing Plugins), which gives them access to geometry and data.

Vector Types

@@ -360,12 +441,12 @@

Note that the above colors can be directly passed to make_RGBAcolor to specify an alpha (transparency) value:

RGBAcolor red_trans = make_RGBAcolor( RGB::red, 0.5 );
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024

Coordinate System

-

Helios uses a right-handed Cartesian coordinate system. (x,y,z) coordinates are typically specified using the 'vec3' data structure (see Vector Types).
+

Helios uses a right-handed Cartesian coordinate system. (x,y,z) coordinates are typically specified using the 'vec3' data structure (see Vector Types).

-

Rotations are typically specified using spherical angles (see Vector Types). A rotation of the elevation angle $\theta$ rotates the object about its y-axis. A rotation of the azimuthal angle $\varphi$ rotates the object clockwise about its z-axis.

+

Rotations are typically specified using spherical angles (see Vector Types). A rotation of the elevation angle $\theta$ rotates the object about its y-axis. A rotation of the azimuthal angle $\varphi$ rotates the object clockwise about its z-axis.

When compass directions are used, +y corresponds to North, and +x corresponds East. The azimuthal angle $\varphi$ is measured clockwise from North.

@@ -435,7 +516,7 @@

Adding Patches

-

Patches are added by specifying the (x,y,z) coordinate of its center, the lengths of its sides in the x- and y-directions, and optionally its spherical rotation (see Coordinate System) and r-g-b color. The following is an example of using the 'addPatch' function to add a simple patch:

+

Patches are added by specifying the (x,y,z) coordinate of its center, the lengths of its sides in the x- and y-directions, and optionally its spherical rotation (see Coordinate System) and r-g-b color. The following is an example of using the 'addPatch' function to add a simple patch:

#include "Context.h"
using namespace helios;
@@ -450,9 +531,9 @@

UUID = context.addPatch( center, size );
}
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503

This will add the Patch shown below, with the default orientation of horizontal. (Note that the addition of the checkerboard ground and the 'Visualizer' plugin is needed to replicate this image, which is not shown in the example code.)

@@ -463,7 +544,7 @@

vec2 size = make_vec2(1,1);
SphericalCoord rotation = make_SphericalCoord(0.25*M_PI,0.5*M_PI);
context.addPatch( center, size, rotation );
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534

This will first rotate the patch by 0.25 $\pi$ rad about the x-axis such that its normal is pointing toward the +y direction, THEN it will apply a clockwise azimuthal rotation of 0.5 $\pi$ rad such that its normal is pointing in the +x direction (which will be its final orientation). Note that in order to have more control over rotations, it is recommended to use the Primitive::rotate() function (see "Primitive Transformations" section below).

Adding Triangles

@@ -483,7 +564,7 @@

UUID = context.addTriangle( v0, v1, v2, RGB::red );
}
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328

This will add the Triangle shown below. (Note that the addition of the checkerboard ground and the 'Visualizer' plugin is needed to replicate this image, which is not shown in the example code.)

@@ -496,7 +577,7 @@

Right-hand rule to determine triangle normal direction based on the three vertices 0, 1, and 2.

Adding Voxels

-

Voxels are added by specifying the (x,y,z) coordinate of its center, the lengths of its sides in the x-, y-, and z-directions, and optionally its spherical rotation (see Coordinate System) and r-g-b color. The following is an example of using the 'addVoxel()' function to add a simple voxel:

+

Voxels are added by specifying the (x,y,z) coordinate of its center, the lengths of its sides in the x-, y-, and z-directions, and optionally its spherical rotation (see Coordinate System) and r-g-b color. The following is an example of using the 'addVoxel()' function to add a simple voxel:

#include "Context.h"
using namespace helios;
@@ -511,7 +592,7 @@

UUID = context.addVoxel( center, size, 0, RGB::red );
}
-
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition: Context.cpp:1372
+
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition Context.cpp:1372

This will add the Voxel shown below, with the default orientation of horizontal. (Note that the addition of the checkerboard ground and the 'visualizer' plugin is needed to replicate this image, which is not shown in the example code.)

@@ -584,7 +665,7 @@

context.translatePrimitive( UUID, translation );
}
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406

Primitive Properties

All primitives have a common set of data that can be accessed by the same set of functions, such as the primitive surface area, the primitive vertices, etc.

@@ -739,8 +820,8 @@

context.deletePrimitive(UUID);
}
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition: Context.cpp:1578
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition Context.cpp:1578

@@ -778,7 +859,7 @@

+ + + + +
PropertyGetter Function
-td
Sphere Spherical object tessellated with Triangle primitives.
  • @@ -791,7 +872,7 @@

-td
Tube Cylindrical tube object tessellated with Triangle primitives. Follows a specified path and can change radius along its length.
  • @@ -802,7 +883,7 @@

-td
Box Rectangular prism object tessellated with Patch primitives.
  • @@ -815,7 +896,7 @@

-td
Disk Ellipsoidal disk object tessellated with Triangle primitives.
  • @@ -832,7 +913,7 @@

-td

Objects

@@ -853,7 +934,7 @@

-td + Sphere Spherical object tessellated with Triangle primitives.

Global Data

Global data is similar to primitive data, except that it does not correspond to any particular primitive, rather it is a single instance of a certain data structure. The functions used to create global data within the Context are essentially the same as those used to create primitive data, except they do not take a primitive UUID as an argument (because they do not correspond to primitives).

@@ -1260,14 +1341,14 @@

}
}
-
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition: Context.cpp:2014
-
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition: Context.cpp:1894
-
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition: Context.cpp:1823
- - -
helios::Time::second
int second
Second of minute.
Definition: helios_vector_types.h:1355
-
helios::Time::hour
int hour
Hour of day.
Definition: helios_vector_types.h:1359
-
helios::Time::minute
int minute
Minute of hour.
Definition: helios_vector_types.h:1357
+
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition Context.cpp:2014
+
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition Context.cpp:1894
+
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition Context.cpp:1823
+ + +
helios::Time::second
int second
Second of minute.
Definition helios_vector_types.h:1355
+
helios::Time::hour
int hour
Hour of day.
Definition helios_vector_types.h:1359
+
helios::Time::minute
int minute
Minute of hour.
Definition helios_vector_types.h:1357

Typically, data is not entered manually, but rather through an XML or text file (see Reading XML Files for information).

It is often necessary to get the number of data points in a given timeseries, which can be accomplished with the command:

uint N = context.getTimeseriesLength( "temperature" );
@@ -1275,7 +1356,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_aerial_li_d_a_r_8cpp.html b/doc/html/_aerial_li_d_a_r_8cpp.html index 729340d97..668a22ef9 100644 --- a/doc/html/_aerial_li_d_a_r_8cpp.html +++ b/doc/html/_aerial_li_d_a_r_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
AerialLiDAR.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_aerial_li_d_a_r_8cpp_source.html b/doc/html/_aerial_li_d_a_r_8cpp_source.html index 4b6e57d96..c982a3b01 100644 --- a/doc/html/_aerial_li_d_a_r_8cpp_source.html +++ b/doc/html/_aerial_li_d_a_r_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
AerialLiDAR.cpp
@@ -98,6 +110,7 @@
18using namespace std;
19using namespace helios;
20
+
21AerialScanMetadata::AerialScanMetadata( const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence ){
22
23 //Copy arguments into structure variables
@@ -109,7 +122,9 @@
29 beamDivergence = __beamDivergence;
30
31}
+
32
+
33AerialLiDARcloud::AerialLiDARcloud( void ){
34
35 hitgridcellcomputed = false;
@@ -117,11 +132,15 @@
37 printmessages = true;
38
39}
+
40
+
44
+
45int AerialLiDARcloud::selfTest(void){
46
47 float err_tol = 0.1;
@@ -356,23 +375,33 @@
276 }
277
278}
+
279
+
280void AerialLiDARcloud::disableMessages( void ){
281 printmessages = false;
282}
+
283
+
284void AerialLiDARcloud::enableMessages( void ){
285 printmessages = true;
286}
+
287
+
288uint AerialLiDARcloud::getScanCount( void ){
289 return scans.size();
290}
+
291
+
292void AerialLiDARcloud::addScan( const AerialScanMetadata newscan ){
293 scans.push_back(newscan);
294}
+
295
+
296void AerialLiDARcloud::addHitPoint( const uint scanID, const helios::vec3 hit_xyz, helios::vec3 ray_origin ){
297
298 vec3 direction_cart = hit_xyz-ray_origin;
@@ -387,7 +416,9 @@
307 addHitPoint( scanID, hit_xyz, direction_sphere, color, data );
308
309}
+
310
+
311void AerialLiDARcloud::addHitPoint( const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction ){
312
313 //default color
@@ -399,7 +430,9 @@
319 addHitPoint( scanID, hit_xyz, direction, color, data );
320
321}
+
322
+
323void AerialLiDARcloud::addHitPoint( const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const std::map<std::string, float> data ){
324
325 //default color
@@ -408,7 +441,9 @@
328 addHitPoint( scanID, hit_xyz, direction, color, data );
329
330}
+
331
+
332void AerialLiDARcloud::addHitPoint( const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const helios::RGBcolor color ){
333
334 //empty data
@@ -417,7 +452,9 @@
337 addHitPoint( scanID, hit_xyz, direction, color, data );
338
339}
+
340
+
341void AerialLiDARcloud::addHitPoint( const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const helios::RGBcolor color, const std::map<std::string, float> data ){
342
343 //error checking
@@ -432,7 +469,9 @@
352 hits.push_back( hit );
353
354}
+
355
+
356void AerialLiDARcloud::deleteHitPoint( const uint index ){
357
358 if( index>=hits.size() ){
@@ -448,53 +487,69 @@
368 hits.pop_back();
369
370}
+
371
+
372uint AerialLiDARcloud::getHitCount( void ) const{
373 return hits.size();
374}
+
375
+
376helios::vec3 AerialLiDARcloud::getScanCenter( const uint scanID ) const{
377 if( scanID>=scans.size() ){
378 helios_runtime_error("ERROR (AerialLiDARcloud::getScanCenter): Cannot get center of scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
379 }
380 return scans.at(scanID).center;
381}
+
382
+
383helios::vec2 AerialLiDARcloud::getScanExtent( const uint scanID ) const{
384 if( scanID>=scans.size() ){
385 helios_runtime_error("ERROR (AerialLiDARcloud::getScanExtent): Cannot get extent for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
386 }
387 return scans.at(scanID).extent;
388}
+
389
+
390float AerialLiDARcloud::getScanConeAngle( const uint scanID ) const{
391 if( scanID>=scans.size() ){
392 helios_runtime_error("ERROR (AerialLiDARcloud::getScanConeAngle): Cannot get cone angle for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
393 }
394 return scans.at(scanID).coneangle;
395}
+
396
+
397float AerialLiDARcloud::getScanDensity( const uint scanID ) const{
398 if( scanID>=scans.size() ){
399 helios_runtime_error("ERROR (AerialLiDARcloud::getScanDensity): Cannot get point density for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
400 }
401 return scans.at(scanID).scandensity;
402}
+
403
+
404float AerialLiDARcloud::getScanBeamExitDiameter( const uint scanID ) const{
405 if( scanID>=scans.size() ){
406 helios_runtime_error("ERROR (AerialLiDARcloud::getScanBeamExitDiameter): Cannot get exit diameter for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
407 }
408 return scans.at(scanID).exitDiameter;
409}
+
410
+
411float AerialLiDARcloud::getScanBeamDivergence( const uint scanID ) const{
412 if( scanID>=scans.size() ){
413 helios_runtime_error("ERROR (AerialLiDARcloud::getScanBeamDivergence): Cannot get beam divergence for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
414 }
415 return scans.at(scanID).beamDivergence;
416}
+
417
+
418helios::vec3 AerialLiDARcloud::getHitXYZ( const uint index ) const{
419
420 if( index>=hits.size() ){
@@ -504,7 +559,9 @@
424 return hits.at(index).position;
425
426}
+
427
+
428helios::SphericalCoord AerialLiDARcloud::getHitRaydir( const uint index ) const{
429
430 if( index>=hits.size() ){
@@ -515,7 +572,9 @@
435 return hits.at(index).direction;
436
437}
+
438
+
439float AerialLiDARcloud::getHitData( const uint index, const char* label ) const{
440
441 if( index>=hits.size() ){
@@ -532,7 +591,9 @@
452 return hit_data.at(label);
453
454}
+
455
+
456void AerialLiDARcloud::setHitData( const uint index, const char* label, const float value ){
457
458 if( index>=hits.size() ){
@@ -543,7 +604,9 @@
463 hits.at(index).data[label] = value;
464
465}
+
466
+
467bool AerialLiDARcloud::doesHitDataExist( const uint index, const char* label ) const{
468
469 if( index>=hits.size() ){
@@ -558,7 +621,9 @@
478 }
479
480}
+
481
+
482RGBcolor AerialLiDARcloud::getHitColor( const uint index ) const{
483
484 if( index>=hits.size() ){
@@ -569,7 +634,9 @@
489 return hits.at(index).color;
490
491}
+
492
+
493int AerialLiDARcloud::getHitScanID( const uint index ) const{
494
495 if( index>=hits.size() ){
@@ -580,7 +647,9 @@
500 return hits.at(index).scanID;
501
502}
+
503
+
504helios::int3 AerialLiDARcloud::getHitGridCell( const uint index ) const{
505
506 if( index>=hits.size() ){
@@ -594,7 +663,9 @@
514 return hits.at(index).gridcell;
515
516}
+
517
+
518void AerialLiDARcloud::setHitGridCell( const uint index, const helios::int3 ijk ){
519
520 if( index>=hits.size() ){
@@ -617,6 +688,7 @@
537 hits.at(index).gridcell = ijk;
538
539}
+
540
541void AerialLiDARcloud::coordinateShift( const helios::vec3 shift ){
542
@@ -634,10 +706,13 @@
554
555}
556
+
557void AerialLiDARcloud::addHitsToVisualizer( Visualizer* visualizer, const uint pointsize ) const{
558 addHitsToVisualizer( visualizer, pointsize, "" );
559}
+
560
+
561void AerialLiDARcloud::addHitsToVisualizer( Visualizer* visualizer, const uint pointsize, const char* color_value ) const{
562
563 if( printmessages && scans.size()==0 ){
@@ -699,7 +774,9 @@
619 }
620
621}
+
622
+
623void AerialLiDARcloud::addGridToVisualizer( Visualizer* visualizer ) const{
624
625 if( printmessages && scans.size()==0 ){
@@ -753,7 +830,9 @@
673 float R = 2.f*sqrt( pow(boxmax.x-boxmin.x,2) + pow(boxmax.y-boxmin.y,2) + pow(boxmax.z-boxmin.z,2) );
674
675}
+
676
+
677void AerialLiDARcloud::getHitBoundingBox( helios::vec3& boxmin, helios::vec3& boxmax ) const{
678
679 if( printmessages && hits.size()==0 ){
@@ -790,9 +869,11 @@
710 }
711
712}
+
713
714// -------- GRID -------- //
715
+
716helios::int3 AerialLiDARcloud::gridindex2ijk( const int index ) const{
717
718 if( index<0 || index>=gridresolution.x*gridresolution.y*gridresolution.z ){
@@ -817,7 +898,9 @@
737 }
738
739}
+
740
+
741int AerialLiDARcloud::gridijk2index( const helios::int3 ijk ) const{
742
743 int index = ijk.z*gridresolution.x*gridresolution.y+ijk.y*gridresolution.y+ijk.x;
@@ -829,29 +912,39 @@
749 }
750
751}
+
752
+
753helios::vec3 AerialLiDARcloud::getGridCenter( void ) const{
754
755 return gridcenter;
756}
+
757
+
758helios::vec3 AerialLiDARcloud::getGridExtent( void ) const{
759
760 return gridextent;
761
762}
+
763
+
764helios::int3 AerialLiDARcloud::getGridResolution( void ) const{
765
766 return gridresolution;
767}
+
768
+
769float AerialLiDARcloud::getGridRotation( void ) const{
770
771 return gridrotation;
772
773}
+
774
+
775helios::vec3 AerialLiDARcloud::getCellCenter( const helios::int3 ijk ) const{
776
777 float x = -0.5*gridextent.x+(float(ijk.x)+0.5f)*gridextent.x/float(gridresolution.x);
@@ -870,15 +963,19 @@
790 return make_vec3(xy.x,xy.y,z);
791
792}
+
793
+
794vec3 AerialLiDARcloud::getCellSize( void ) const{
795
796 return make_vec3( gridextent.x/float(gridresolution.x), gridextent.y/float(gridresolution.y), gridextent.z/float(gridresolution.z) );
797
798}
+
799
800// -------- LEAF AREA -------- //
801
+
802void AerialLiDARcloud::setCellLeafArea( const float area, const int3 ijk ){
803
804 if( ijk.x<0 || ijk.x>=gridresolution.x ){
@@ -907,7 +1004,9 @@
827 leaf_area.at(ijk.z).at(ijk.y).at(ijk.x) = area;
828
829}
+
830
+
831float AerialLiDARcloud::getCellLeafArea( const int3 ijk ) const{
832
833 if( leaf_area.size()!=gridresolution.z ){
@@ -931,7 +1030,9 @@
851 return leaf_area.at(ijk.z).at(ijk.y).at(ijk.x);
852
853}
+
854
+
855float AerialLiDARcloud::getCellLeafAreaDensity( const int3 ijk ) const{
856
857 if( leaf_area.size()!=gridresolution.z ){
@@ -957,7 +1058,9 @@
877 return leaf_area.at(ijk.z).at(ijk.y).at(ijk.x)/(gridsize.x*gridsize.y*gridsize.z);
878
879}
+
880
+
881void AerialLiDARcloud::setCellTransmissionProbability( const int P_denom, const int P_trans, const int3 ijk ){
882
883 if( ijk.x<0 || ijk.x>=gridresolution.x ){
@@ -986,7 +1089,9 @@
906 P_counts.at(ijk.z).at(ijk.y).at(ijk.x) = make_int2(P_denom,P_trans);
907
908}
+
909
+
910void AerialLiDARcloud::getCellTransmissionProbability( const int3 ijk, int& P_denom, int& P_trans ) const{
911
912 if( P_counts.size()!=gridresolution.z ){
@@ -1012,7 +1117,9 @@
932 P_trans = P_counts.at(ijk.z).at(ijk.y).at(ijk.x).y;
933
934}
+
935
+
936void AerialLiDARcloud::setCellRbar( const float rbar, const int3 ijk ){
937
938 if( ijk.x<0 || ijk.x>=gridresolution.x ){
@@ -1041,7 +1148,9 @@
961 r_bar.at(ijk.z).at(ijk.y).at(ijk.x) = rbar;
962
963}
+
964
+
965float AerialLiDARcloud::getCellRbar( const int3 ijk ) const{
966
967 if( r_bar.size()!=gridresolution.z ){
@@ -1065,6 +1174,7 @@
985 return r_bar.at(ijk.z).at(ijk.y).at(ijk.x);
986
987}
+
988
989helios::vec4 AerialLiDARcloud::RANSAC( const int maxIter, const float threshDist, const float inlierRatio, const std::vector<helios::vec3>& hits, std::vector<bool>& inliers ){
990
@@ -1119,7 +1229,7 @@
1039 }
1040
1041 //check if this model is better than the current 'best' model
-
1042 if( errsum/float(Ninlier)<bestError && float(Ninlier)/float(N)>inlierRatio ){
+
1042 if( errsum/float(Ninlier)<bestError && float(Ninlier)/float(N)>inlierRatio ){
1043
1044 //update the 'best' model
1045 bestModel = maybeModel;
@@ -1148,6 +1258,7 @@
1068
1069}
1070
+
1071void AerialLiDARcloud::generateHeightModel( const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation ){
1072
1073 if( printmessages ){
@@ -1444,8 +1555,10 @@
1364 }
1365
1366}
+
1367
1368
+
1369void AerialLiDARcloud::setCellVegetationHeight( const float height, const int2 ij ){
1370
1371 if( ij.x<0 || ij.x>=gridresolution.x ){
@@ -1467,7 +1580,9 @@
1387 vegetation_height.at(ij.y).at(ij.x) = height;
1388
1389}
+
1390
+
1391float AerialLiDARcloud::getCellVegetationHeight( const int2 ij ) const{
1392
1393 if( vegetation_height.size()!=gridresolution.y ){
@@ -1487,7 +1602,9 @@
1407 return vegetation_height.at(ij.y).at(ij.x);
1408
1409}
+
1410
+
1411void AerialLiDARcloud::setCellMaximumHitHeight( const float height, const int2 ij ){
1412
1413 if( ij.x<0 || ij.x>=gridresolution.x ){
@@ -1509,7 +1626,9 @@
1429 maxhit_height.at(ij.y).at(ij.x) = height;
1430
1431}
+
1432
+
1433float AerialLiDARcloud::getCellMaximumHitHeight( const int2 ij ) const{
1434
1435 if( maxhit_height.size()!=gridresolution.y ){
@@ -1529,7 +1648,9 @@
1449 return maxhit_height.at(ij.y).at(ij.x);
1450
1451}
+
1452
+
1453void AerialLiDARcloud::setCellGroundHeight( const float height, const int2 ij ){
1454
1455 if( ij.x<0 || ij.x>=gridresolution.x ){
@@ -1551,7 +1672,9 @@
1471 ground_height.at(ij.y).at(ij.x) = height;
1472
1473}
+
1474
+
1475float AerialLiDARcloud::getCellGroundHeight( const int2 ij ) const{
1476
1477 if( ground_height.size()!=gridresolution.y ){
@@ -1571,6 +1694,7 @@
1491 return ground_height.at(ij.y).at(ij.x);
1492
1493}
+
1494
1495void AerialLiDARcloud::calculateCoverFraction( void ){
1496
@@ -1624,6 +1748,7 @@
1544
1545}
1546
+
1547void AerialLiDARcloud::setCellCoverFraction( const float fcover, const int2 ij ){
1548
1549 if( ij.x<0 || ij.x>=gridresolution.x ){
@@ -1645,7 +1770,9 @@
1565 cover_fraction.at(ij.y).at(ij.x) = fcover;
1566
1567}
+
1568
+
1569float AerialLiDARcloud::getCellCoverFraction( const int2 ij ) const{
1570
1571 if( cover_fraction.size()!=gridresolution.y ){
@@ -1665,6 +1792,7 @@
1585 return cover_fraction.at(ij.y).at(ij.x);
1586
1587}
+
1588
1589
1590
@@ -1688,6 +1816,7 @@
1608
1609}
1610
+
1611void AerialLiDARcloud::calculateHitGridCell( void ){
1612
1613 // ---- Hit Points ---- //
@@ -1732,119 +1861,121 @@
1652
1653
1654}
+
-
AerialLiDARcloud
Primary class for aerial LiDAR scan.
Definition: AerialLiDAR.h:88
-
AerialLiDARcloud::getCellMaximumHitHeight
float getCellMaximumHitHeight(const helios::int2 ij) const
Get the height of the highest hit point at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1433
-
AerialLiDARcloud::getScanDensity
float getScanDensity(const uint scanID) const
Get the scan point density in points/m^2.
Definition: AerialLiDAR.cpp:397
-
AerialLiDARcloud::syntheticScan
void syntheticScan(helios::Context *context, const char *xml_file)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
Definition: AerialLiDAR.cu:625
-
AerialLiDARcloud::getScanConeAngle
float getScanConeAngle(const uint scanID) const
Get the scan cone angle in degrees.
Definition: AerialLiDAR.cpp:390
-
AerialLiDARcloud::setCellRbar
void setCellRbar(const float r_bar, const helios::int3 ijk)
Set the average ray propagation distance in meters.
Definition: AerialLiDAR.cpp:936
-
AerialLiDARcloud::getCellVegetationHeight
float getCellVegetationHeight(const helios::int2 ij) const
Get the height of the vegetation at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1391
-
AerialLiDARcloud::getScanCenter
helios::vec3 getScanCenter(const uint scanID) const
Get the (x,y,z) of scan surface center.
Definition: AerialLiDAR.cpp:376
-
AerialLiDARcloud::getHitData
float getHitData(const uint index, const char *label) const
Get floating point data value associated with a hit point.
Definition: AerialLiDAR.cpp:439
-
AerialLiDARcloud::getHitGridCell
helios::int3 getHitGridCell(const uint index) const
Get the grid cell in which the hit point resides.
Definition: AerialLiDAR.cpp:504
-
AerialLiDARcloud::addScan
void addScan(const AerialScanMetadata newscan)
Add a LiDAR scan to the point cloud.
Definition: AerialLiDAR.cpp:292
-
AerialLiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, const uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition: AerialLiDAR.cpp:557
-
AerialLiDARcloud::selfTest
int selfTest(void)
Self-test (unit test) function.
Definition: AerialLiDAR.cpp:45
-
AerialLiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition: AerialLiDAR.cpp:418
-
AerialLiDARcloud::gridijk2index
int gridijk2index(const helios::int3 ijk) const
Use a grid cell's local index in the x-, y-, and z-directions to retrieve the cells' global index (ra...
Definition: AerialLiDAR.cpp:741
-
AerialLiDARcloud::getCellGroundHeight
float getCellGroundHeight(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1475
-
AerialLiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(const uint scanID) const
Divergence angle of the laser beam in radians.
Definition: AerialLiDAR.cpp:411
-
AerialLiDARcloud::setCellCoverFraction
void setCellCoverFraction(const float cover_fraction, const helios::int2 ij)
Set the ground cover fraction at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1547
-
AerialLiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(const helios::int3 ijk) const
Get the leaf area density of a grid cell in 1/m.
Definition: AerialLiDAR.cpp:855
-
AerialLiDARcloud::getCellSize
helios::vec3 getCellSize() const
Get the size of grid cells.
Definition: AerialLiDAR.cpp:794
-
AerialLiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU(const float Gtheta)
Calculate the leaf area for each grid volume.
Definition: AerialLiDAR.cu:287
-
AerialLiDARcloud::setCellMaximumHitHeight
void setCellMaximumHitHeight(const float height, const helios::int2 ij)
Set the height of the highest hit point at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1411
-
AerialLiDARcloud::getCellCenter
helios::vec3 getCellCenter(const helios::int3 ijk) const
Get the center of the (i,j,k)th grid cell.
Definition: AerialLiDAR.cpp:775
-
AerialLiDARcloud::setCellTransmissionProbability
void setCellTransmissionProbability(const int P_denom, const int P_trans, const helios::int3 ijk)
Set the cell transmission probability counts.
Definition: AerialLiDAR.cpp:881
-
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition: AerialLiDAR.cpp:296
-
AerialLiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition: AerialLiDAR.cpp:677
-
AerialLiDARcloud::setCellLeafArea
void setCellLeafArea(const float area, const helios::int3 ijk)
Set the leaf area of a grid cell in m^2.
Definition: AerialLiDAR.cpp:802
-
AerialLiDARcloud::setCellGroundHeight
void setCellGroundHeight(const float height, const helios::int2 ij)
Set the height of the ground at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1453
-
AerialLiDARcloud::getGridExtent
helios::vec3 getGridExtent(void) const
Get the size of the global grid in the x-, y-, and z-directions.
Definition: AerialLiDAR.cpp:758
-
AerialLiDARcloud::getCellTransmissionProbability
void getCellTransmissionProbability(const helios::int3 ijk, int &P_denom, int &P_trans) const
Get the cell transmission probability counts.
Definition: AerialLiDAR.cpp:910
-
AerialLiDARcloud::doesHitDataExist
bool doesHitDataExist(const uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition: AerialLiDAR.cpp:467
-
AerialLiDARcloud::deleteHitPoint
void deleteHitPoint(const uint index)
Delete a hit point in the scan.
Definition: AerialLiDAR.cpp:356
-
AerialLiDARcloud::getCellLeafArea
float getCellLeafArea(const helios::int3 ijk) const
Get the leaf area of a grid cell in m^2.
Definition: AerialLiDAR.cpp:831
-
AerialLiDARcloud::getHitScanID
int getHitScanID(const uint index) const
Get the scan with which a hit is associated.
Definition: AerialLiDAR.cpp:493
-
AerialLiDARcloud::getGridRotation
float getGridRotation() const
Get the azimuthal rotation angle of the grid about its center point.
Definition: AerialLiDAR.cpp:769
-
AerialLiDARcloud::disableMessages
void disableMessages(void)
Disable all print messages to the screen except for fatal error messages.
Definition: AerialLiDAR.cpp:280
-
AerialLiDARcloud::getHitCount
uint getHitCount(void) const
Get the number of hit points in the point cloud.
Definition: AerialLiDAR.cpp:372
-
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition: AerialLiDAR.cpp:288
-
AerialLiDARcloud::setHitData
void setHitData(const uint index, const char *label, const float value)
Set floating point data value associated with a hit point.
Definition: AerialLiDAR.cpp:456
-
AerialLiDARcloud::calculateHitGridCell
void calculateHitGridCell()
Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
Definition: AerialLiDAR.cpp:1611
-
AerialLiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(const uint index) const
Get ray direction of hit point in the scan based on its index.
Definition: AerialLiDAR.cpp:428
-
AerialLiDARcloud::getCellCoverFraction
float getCellCoverFraction(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1569
-
AerialLiDARcloud::AerialLiDARcloud
AerialLiDARcloud(void)
Aerial LiDAR point cloud constructor.
Definition: AerialLiDAR.cpp:33
-
AerialLiDARcloud::~AerialLiDARcloud
~AerialLiDARcloud(void)
Aerial LiDAR point cloud destructor.
Definition: AerialLiDAR.cpp:41
-
AerialLiDARcloud::getScanExtent
helios::vec2 getScanExtent(const uint scanID) const
Get the (x,y) extent of scan surface.
Definition: AerialLiDAR.cpp:383
-
AerialLiDARcloud::getGridCenter
helios::vec3 getGridCenter(void) const
Get the (x,y,z) coordinate of the grid center.
Definition: AerialLiDAR.cpp:753
-
AerialLiDARcloud::gridindex2ijk
helios::int3 gridindex2ijk(const int index) const
Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-,...
Definition: AerialLiDAR.cpp:716
-
AerialLiDARcloud::getCellRbar
float getCellRbar(const helios::int3 ijk) const
Get the average ray propagation distance in meters.
Definition: AerialLiDAR.cpp:965
-
AerialLiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(const uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition: AerialLiDAR.cpp:404
-
AerialLiDARcloud::getGridResolution
helios::int3 getGridResolution(void) const
Get the total number of cells in the grid.
Definition: AerialLiDAR.cpp:764
-
AerialLiDARcloud::enableMessages
void enableMessages(void)
Enable all print messages to the screen.
Definition: AerialLiDAR.cpp:284
-
AerialLiDARcloud::getHitColor
helios::RGBcolor getHitColor(const uint index) const
Get color of hit point.
Definition: AerialLiDAR.cpp:482
-
AerialLiDARcloud::setCellVegetationHeight
void setCellVegetationHeight(const float height, const helios::int2 ij)
Set the height of the vegetation at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1369
-
AerialLiDARcloud::setHitGridCell
void setHitGridCell(const uint index, const helios::int3 ijk)
Set the grid cell in which the hit point resides.
Definition: AerialLiDAR.cpp:518
-
AerialLiDARcloud::generateHeightModel
void generateHeightModel(const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation)
Determine the ground and vegetation height for each x-y grid cell. Inputs to this function are parame...
Definition: AerialLiDAR.cpp:1071
-
AerialLiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition: AerialLiDAR.cpp:623
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition: Visualizer.h:316
-
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition: Visualizer.cpp:2104
-
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition: Visualizer.cpp:1851
-
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition: Visualizer.cpp:2697
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition: global.cpp:223
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition: global.cpp:1084
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition: helios_vector_types.h:1133
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
AerialHitPoint
Structure containing metadata for an aerial hit point.
Definition: AerialLiDAR.h:64
-
AerialScanMetadata
Structure containing metadata for an aerial scan.
Definition: AerialLiDAR.h:26
-
AerialScanMetadata::extent
helios::vec2 extent
(x,y) size/extent of scan surface
Definition: AerialLiDAR.h:43
-
AerialScanMetadata::coneangle
float coneangle
Width of scan cone in degrees.
Definition: AerialLiDAR.h:46
-
AerialScanMetadata::AerialScanMetadata
AerialScanMetadata(const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence)
Create an aerial LiDAR scan data structure.
Definition: AerialLiDAR.cpp:21
-
AerialScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition: AerialLiDAR.h:59
-
AerialScanMetadata::center
helios::vec3 center
(x,y,z) position of scan surface center
Definition: AerialLiDAR.h:40
-
AerialScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition: AerialLiDAR.h:53
-
AerialScanMetadata::scandensity
float scandensity
Scan density in points/m^2.
Definition: AerialLiDAR.h:49
-
Colormap
RGB color map.
Definition: Visualizer.h:165
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec4
Vector of four elements of type 'float'.
Definition: helios_vector_types.h:673
-
helios::vec4::y
float y
Second element in vector.
Definition: helios_vector_types.h:679
-
helios::vec4::w
float w
Fourth element in vector.
Definition: helios_vector_types.h:683
-
helios::vec4::z
float z
Third element in vector.
Definition: helios_vector_types.h:681
-
helios::vec4::x
float x
First element in vector.
Definition: helios_vector_types.h:677
+
AerialLiDARcloud
Primary class for aerial LiDAR scan.
Definition AerialLiDAR.h:88
+
AerialLiDARcloud::getCellMaximumHitHeight
float getCellMaximumHitHeight(const helios::int2 ij) const
Get the height of the highest hit point at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1433
+
AerialLiDARcloud::getScanDensity
float getScanDensity(const uint scanID) const
Get the scan point density in points/m^2.
Definition AerialLiDAR.cpp:397
+
AerialLiDARcloud::syntheticScan
void syntheticScan(helios::Context *context, const char *xml_file)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
Definition AerialLiDAR.cu:625
+
AerialLiDARcloud::getScanConeAngle
float getScanConeAngle(const uint scanID) const
Get the scan cone angle in degrees.
Definition AerialLiDAR.cpp:390
+
AerialLiDARcloud::setCellRbar
void setCellRbar(const float r_bar, const helios::int3 ijk)
Set the average ray propagation distance in meters.
Definition AerialLiDAR.cpp:936
+
AerialLiDARcloud::getCellVegetationHeight
float getCellVegetationHeight(const helios::int2 ij) const
Get the height of the vegetation at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1391
+
AerialLiDARcloud::getScanCenter
helios::vec3 getScanCenter(const uint scanID) const
Get the (x,y,z) of scan surface center.
Definition AerialLiDAR.cpp:376
+
AerialLiDARcloud::getHitData
float getHitData(const uint index, const char *label) const
Get floating point data value associated with a hit point.
Definition AerialLiDAR.cpp:439
+
AerialLiDARcloud::getHitGridCell
helios::int3 getHitGridCell(const uint index) const
Get the grid cell in which the hit point resides.
Definition AerialLiDAR.cpp:504
+
AerialLiDARcloud::addScan
void addScan(const AerialScanMetadata newscan)
Add a LiDAR scan to the point cloud.
Definition AerialLiDAR.cpp:292
+
AerialLiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, const uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition AerialLiDAR.cpp:557
+
AerialLiDARcloud::selfTest
int selfTest(void)
Self-test (unit test) function.
Definition AerialLiDAR.cpp:45
+
AerialLiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition AerialLiDAR.cpp:418
+
AerialLiDARcloud::gridijk2index
int gridijk2index(const helios::int3 ijk) const
Use a grid cell's local index in the x-, y-, and z-directions to retrieve the cells' global index (ra...
Definition AerialLiDAR.cpp:741
+
AerialLiDARcloud::getCellGroundHeight
float getCellGroundHeight(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1475
+
AerialLiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(const uint scanID) const
Divergence angle of the laser beam in radians.
Definition AerialLiDAR.cpp:411
+
AerialLiDARcloud::setCellCoverFraction
void setCellCoverFraction(const float cover_fraction, const helios::int2 ij)
Set the ground cover fraction at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1547
+
AerialLiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(const helios::int3 ijk) const
Get the leaf area density of a grid cell in 1/m.
Definition AerialLiDAR.cpp:855
+
AerialLiDARcloud::getCellSize
helios::vec3 getCellSize() const
Get the size of grid cells.
Definition AerialLiDAR.cpp:794
+
AerialLiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU(const float Gtheta)
Calculate the leaf area for each grid volume.
Definition AerialLiDAR.cu:287
+
AerialLiDARcloud::setCellMaximumHitHeight
void setCellMaximumHitHeight(const float height, const helios::int2 ij)
Set the height of the highest hit point at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1411
+
AerialLiDARcloud::getCellCenter
helios::vec3 getCellCenter(const helios::int3 ijk) const
Get the center of the (i,j,k)th grid cell.
Definition AerialLiDAR.cpp:775
+
AerialLiDARcloud::setCellTransmissionProbability
void setCellTransmissionProbability(const int P_denom, const int P_trans, const helios::int3 ijk)
Set the cell transmission probability counts.
Definition AerialLiDAR.cpp:881
+
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition AerialLiDAR.cpp:296
+
AerialLiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition AerialLiDAR.cpp:677
+
AerialLiDARcloud::setCellLeafArea
void setCellLeafArea(const float area, const helios::int3 ijk)
Set the leaf area of a grid cell in m^2.
Definition AerialLiDAR.cpp:802
+
AerialLiDARcloud::setCellGroundHeight
void setCellGroundHeight(const float height, const helios::int2 ij)
Set the height of the ground at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1453
+
AerialLiDARcloud::getGridExtent
helios::vec3 getGridExtent(void) const
Get the size of the global grid in the x-, y-, and z-directions.
Definition AerialLiDAR.cpp:758
+
AerialLiDARcloud::getCellTransmissionProbability
void getCellTransmissionProbability(const helios::int3 ijk, int &P_denom, int &P_trans) const
Get the cell transmission probability counts.
Definition AerialLiDAR.cpp:910
+
AerialLiDARcloud::doesHitDataExist
bool doesHitDataExist(const uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition AerialLiDAR.cpp:467
+
AerialLiDARcloud::deleteHitPoint
void deleteHitPoint(const uint index)
Delete a hit point in the scan.
Definition AerialLiDAR.cpp:356
+
AerialLiDARcloud::getCellLeafArea
float getCellLeafArea(const helios::int3 ijk) const
Get the leaf area of a grid cell in m^2.
Definition AerialLiDAR.cpp:831
+
AerialLiDARcloud::getHitScanID
int getHitScanID(const uint index) const
Get the scan with which a hit is associated.
Definition AerialLiDAR.cpp:493
+
AerialLiDARcloud::getGridRotation
float getGridRotation() const
Get the azimuthal rotation angle of the grid about its center point.
Definition AerialLiDAR.cpp:769
+
AerialLiDARcloud::disableMessages
void disableMessages(void)
Disable all print messages to the screen except for fatal error messages.
Definition AerialLiDAR.cpp:280
+
AerialLiDARcloud::getHitCount
uint getHitCount(void) const
Get the number of hit points in the point cloud.
Definition AerialLiDAR.cpp:372
+
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition AerialLiDAR.cpp:288
+
AerialLiDARcloud::setHitData
void setHitData(const uint index, const char *label, const float value)
Set floating point data value associated with a hit point.
Definition AerialLiDAR.cpp:456
+
AerialLiDARcloud::calculateHitGridCell
void calculateHitGridCell()
Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
Definition AerialLiDAR.cpp:1611
+
AerialLiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(const uint index) const
Get ray direction of hit point in the scan based on its index.
Definition AerialLiDAR.cpp:428
+
AerialLiDARcloud::getCellCoverFraction
float getCellCoverFraction(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1569
+
AerialLiDARcloud::AerialLiDARcloud
AerialLiDARcloud(void)
Aerial LiDAR point cloud constructor.
Definition AerialLiDAR.cpp:33
+
AerialLiDARcloud::~AerialLiDARcloud
~AerialLiDARcloud(void)
Aerial LiDAR point cloud destructor.
Definition AerialLiDAR.cpp:41
+
AerialLiDARcloud::getScanExtent
helios::vec2 getScanExtent(const uint scanID) const
Get the (x,y) extent of scan surface.
Definition AerialLiDAR.cpp:383
+
AerialLiDARcloud::getGridCenter
helios::vec3 getGridCenter(void) const
Get the (x,y,z) coordinate of the grid center.
Definition AerialLiDAR.cpp:753
+
AerialLiDARcloud::gridindex2ijk
helios::int3 gridindex2ijk(const int index) const
Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-,...
Definition AerialLiDAR.cpp:716
+
AerialLiDARcloud::getCellRbar
float getCellRbar(const helios::int3 ijk) const
Get the average ray propagation distance in meters.
Definition AerialLiDAR.cpp:965
+
AerialLiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(const uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition AerialLiDAR.cpp:404
+
AerialLiDARcloud::getGridResolution
helios::int3 getGridResolution(void) const
Get the total number of cells in the grid.
Definition AerialLiDAR.cpp:764
+
AerialLiDARcloud::enableMessages
void enableMessages(void)
Enable all print messages to the screen.
Definition AerialLiDAR.cpp:284
+
AerialLiDARcloud::getHitColor
helios::RGBcolor getHitColor(const uint index) const
Get color of hit point.
Definition AerialLiDAR.cpp:482
+
AerialLiDARcloud::setCellVegetationHeight
void setCellVegetationHeight(const float height, const helios::int2 ij)
Set the height of the vegetation at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1369
+
AerialLiDARcloud::setHitGridCell
void setHitGridCell(const uint index, const helios::int3 ijk)
Set the grid cell in which the hit point resides.
Definition AerialLiDAR.cpp:518
+
AerialLiDARcloud::generateHeightModel
void generateHeightModel(const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation)
Determine the ground and vegetation height for each x-y grid cell. Inputs to this function are parame...
Definition AerialLiDAR.cpp:1071
+
AerialLiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition AerialLiDAR.cpp:623
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition Visualizer.h:326
+
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition Visualizer.cpp:2108
+
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition Visualizer.cpp:1855
+
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition Visualizer.cpp:2701
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition global.cpp:223
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition global.cpp:1084
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition helios_vector_types.h:1133
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
AerialHitPoint
Structure containing metadata for an aerial hit point.
Definition AerialLiDAR.h:64
+
AerialScanMetadata
Structure containing metadata for an aerial scan.
Definition AerialLiDAR.h:26
+
AerialScanMetadata::extent
helios::vec2 extent
(x,y) size/extent of scan surface
Definition AerialLiDAR.h:43
+
AerialScanMetadata::coneangle
float coneangle
Width of scan cone in degrees.
Definition AerialLiDAR.h:46
+
AerialScanMetadata::AerialScanMetadata
AerialScanMetadata(const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence)
Create an aerial LiDAR scan data structure.
Definition AerialLiDAR.cpp:21
+
AerialScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition AerialLiDAR.h:59
+
AerialScanMetadata::center
helios::vec3 center
(x,y,z) position of scan surface center
Definition AerialLiDAR.h:40
+
AerialScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition AerialLiDAR.h:53
+
AerialScanMetadata::scandensity
float scandensity
Scan density in points/m^2.
Definition AerialLiDAR.h:49
+
Colormap
RGB color map.
Definition Visualizer.h:175
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec4
Vector of four elements of type 'float'.
Definition helios_vector_types.h:673
+
helios::vec4::y
float y
Second element in vector.
Definition helios_vector_types.h:679
+
helios::vec4::w
float w
Fourth element in vector.
Definition helios_vector_types.h:683
+
helios::vec4::z
float z
Third element in vector.
Definition helios_vector_types.h:681
+
helios::vec4::x
float x
First element in vector.
Definition helios_vector_types.h:677
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+ diff --git a/doc/html/_aerial_li_d_a_r_8cu_source.html b/doc/html/_aerial_li_d_a_r_8cu_source.html index 27892ab12..3311997b7 100644 --- a/doc/html/_aerial_li_d_a_r_8cu_source.html +++ b/doc/html/_aerial_li_d_a_r_8cu_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
AerialLiDAR.cu
@@ -364,10 +376,13 @@
284 return v0.at(1)<v1.at(1);
285}
286
+
287void AerialLiDARcloud::calculateLeafAreaGPU( const float Gtheta ){
288 calculateLeafAreaGPU( Gtheta, 1 );
289}
+
290
+
291void AerialLiDARcloud::calculateLeafAreaGPU( const float Gtheta, const int minVoxelHits ){
292
293 if( printmessages ){
@@ -701,11 +716,15 @@
621 }
622
623}
+
624
+
625void AerialLiDARcloud::syntheticScan( helios::Context* context, const char* xml_file ){
626 syntheticScan( context, xml_file, 1, 0 );
627}
+
628
+
629void AerialLiDARcloud::syntheticScan( helios::Context* context, const char* xml_file, const int rays_per_pulse, const float pulse_distance_threshold ){
630
631 int Npulse;
@@ -1215,7 +1234,9 @@
1135 }
1136
1137}
+
1138
+
1139void AerialLiDARcloud::calculateSyntheticLeafArea( helios::Context* context ){
1140
1141 // float3* d_prim_xyz;
@@ -1326,6 +1347,7 @@
1246 // CUDA_CHECK_ERROR( cudaFree(d_grid_rotation) );
1247
1248}
+
1249
1250__global__ void AERIALLIDAR_CUDA::intersectBoundingBox( const size_t scanSize, float3* d_hit_origin, const float3* d_scan_xyz, const float3 bbcenter, const float3 bbsize, uint* d_boundingbox_hit ){
1251
@@ -1723,73 +1745,74 @@
1643
1644}
-
d_rotatePoint
__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
Definition: RayTracing.cu.h:106
-
AerialLiDARcloud
Primary class for aerial LiDAR scan.
Definition: AerialLiDAR.h:88
-
AerialLiDARcloud::getScanDensity
float getScanDensity(const uint scanID) const
Get the scan point density in points/m^2.
Definition: AerialLiDAR.cpp:397
-
AerialLiDARcloud::syntheticScan
void syntheticScan(helios::Context *context, const char *xml_file)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
Definition: AerialLiDAR.cu:625
-
AerialLiDARcloud::getScanConeAngle
float getScanConeAngle(const uint scanID) const
Get the scan cone angle in degrees.
Definition: AerialLiDAR.cpp:390
-
AerialLiDARcloud::setCellRbar
void setCellRbar(const float r_bar, const helios::int3 ijk)
Set the average ray propagation distance in meters.
Definition: AerialLiDAR.cpp:936
-
AerialLiDARcloud::getScanCenter
helios::vec3 getScanCenter(const uint scanID) const
Get the (x,y,z) of scan surface center.
Definition: AerialLiDAR.cpp:376
-
AerialLiDARcloud::getHitData
float getHitData(const uint index, const char *label) const
Get floating point data value associated with a hit point.
Definition: AerialLiDAR.cpp:439
-
AerialLiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition: AerialLiDAR.cpp:418
-
AerialLiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(const uint scanID) const
Divergence angle of the laser beam in radians.
Definition: AerialLiDAR.cpp:411
-
AerialLiDARcloud::getCellSize
helios::vec3 getCellSize() const
Get the size of grid cells.
Definition: AerialLiDAR.cpp:794
-
AerialLiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU(const float Gtheta)
Calculate the leaf area for each grid volume.
Definition: AerialLiDAR.cu:287
-
AerialLiDARcloud::getCellCenter
helios::vec3 getCellCenter(const helios::int3 ijk) const
Get the center of the (i,j,k)th grid cell.
Definition: AerialLiDAR.cpp:775
-
AerialLiDARcloud::setCellTransmissionProbability
void setCellTransmissionProbability(const int P_denom, const int P_trans, const helios::int3 ijk)
Set the cell transmission probability counts.
Definition: AerialLiDAR.cpp:881
-
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition: AerialLiDAR.cpp:296
-
AerialLiDARcloud::setCellLeafArea
void setCellLeafArea(const float area, const helios::int3 ijk)
Set the leaf area of a grid cell in m^2.
Definition: AerialLiDAR.cpp:802
-
AerialLiDARcloud::doesHitDataExist
bool doesHitDataExist(const uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition: AerialLiDAR.cpp:467
-
AerialLiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition: fileIO.cpp:22
-
AerialLiDARcloud::getHitScanID
int getHitScanID(const uint index) const
Get the scan with which a hit is associated.
Definition: AerialLiDAR.cpp:493
-
AerialLiDARcloud::getGridRotation
float getGridRotation() const
Get the azimuthal rotation angle of the grid about its center point.
Definition: AerialLiDAR.cpp:769
-
AerialLiDARcloud::disableMessages
void disableMessages(void)
Disable all print messages to the screen except for fatal error messages.
Definition: AerialLiDAR.cpp:280
-
AerialLiDARcloud::getHitCount
uint getHitCount(void) const
Get the number of hit points in the point cloud.
Definition: AerialLiDAR.cpp:372
-
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition: AerialLiDAR.cpp:288
-
AerialLiDARcloud::calculateSyntheticLeafArea
void calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition: AerialLiDAR.cu:1139
-
AerialLiDARcloud::calculateHitGridCell
void calculateHitGridCell()
Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
Definition: AerialLiDAR.cpp:1611
-
AerialLiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(const uint index) const
Get ray direction of hit point in the scan based on its index.
Definition: AerialLiDAR.cpp:428
-
AerialLiDARcloud::getScanExtent
helios::vec2 getScanExtent(const uint scanID) const
Get the (x,y) extent of scan surface.
Definition: AerialLiDAR.cpp:383
-
AerialLiDARcloud::getGridCenter
helios::vec3 getGridCenter(void) const
Get the (x,y,z) coordinate of the grid center.
Definition: AerialLiDAR.cpp:753
-
AerialLiDARcloud::gridindex2ijk
helios::int3 gridindex2ijk(const int index) const
Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-,...
Definition: AerialLiDAR.cpp:716
-
AerialLiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(const uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition: AerialLiDAR.cpp:404
-
AerialLiDARcloud::getGridResolution
helios::int3 getGridResolution(void) const
Get the total number of cells in the grid.
Definition: AerialLiDAR.cpp:764
-
AerialLiDARcloud::enableMessages
void enableMessages(void)
Enable all print messages to the screen.
Definition: AerialLiDAR.cpp:284
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition: Context.cpp:7179
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition: Context.cpp:7167
-
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Context.cpp:2046
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition: Context.cpp:7187
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::atan2_2pi
float atan2_2pi(float y, float x)
Four quadrant arc tangent between 0 and 2*pi.
Definition: global.cpp:584
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
d_rotatePoint
__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
Definition RayTracing.cu.h:106
+
AerialLiDARcloud
Primary class for aerial LiDAR scan.
Definition AerialLiDAR.h:88
+
AerialLiDARcloud::getScanDensity
float getScanDensity(const uint scanID) const
Get the scan point density in points/m^2.
Definition AerialLiDAR.cpp:397
+
AerialLiDARcloud::syntheticScan
void syntheticScan(helios::Context *context, const char *xml_file)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
Definition AerialLiDAR.cu:625
+
AerialLiDARcloud::getScanConeAngle
float getScanConeAngle(const uint scanID) const
Get the scan cone angle in degrees.
Definition AerialLiDAR.cpp:390
+
AerialLiDARcloud::setCellRbar
void setCellRbar(const float r_bar, const helios::int3 ijk)
Set the average ray propagation distance in meters.
Definition AerialLiDAR.cpp:936
+
AerialLiDARcloud::getScanCenter
helios::vec3 getScanCenter(const uint scanID) const
Get the (x,y,z) of scan surface center.
Definition AerialLiDAR.cpp:376
+
AerialLiDARcloud::getHitData
float getHitData(const uint index, const char *label) const
Get floating point data value associated with a hit point.
Definition AerialLiDAR.cpp:439
+
AerialLiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition AerialLiDAR.cpp:418
+
AerialLiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(const uint scanID) const
Divergence angle of the laser beam in radians.
Definition AerialLiDAR.cpp:411
+
AerialLiDARcloud::getCellSize
helios::vec3 getCellSize() const
Get the size of grid cells.
Definition AerialLiDAR.cpp:794
+
AerialLiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU(const float Gtheta)
Calculate the leaf area for each grid volume.
Definition AerialLiDAR.cu:287
+
AerialLiDARcloud::getCellCenter
helios::vec3 getCellCenter(const helios::int3 ijk) const
Get the center of the (i,j,k)th grid cell.
Definition AerialLiDAR.cpp:775
+
AerialLiDARcloud::setCellTransmissionProbability
void setCellTransmissionProbability(const int P_denom, const int P_trans, const helios::int3 ijk)
Set the cell transmission probability counts.
Definition AerialLiDAR.cpp:881
+
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition AerialLiDAR.cpp:296
+
AerialLiDARcloud::setCellLeafArea
void setCellLeafArea(const float area, const helios::int3 ijk)
Set the leaf area of a grid cell in m^2.
Definition AerialLiDAR.cpp:802
+
AerialLiDARcloud::doesHitDataExist
bool doesHitDataExist(const uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition AerialLiDAR.cpp:467
+
AerialLiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition fileIO.cpp:22
+
AerialLiDARcloud::getHitScanID
int getHitScanID(const uint index) const
Get the scan with which a hit is associated.
Definition AerialLiDAR.cpp:493
+
AerialLiDARcloud::getGridRotation
float getGridRotation() const
Get the azimuthal rotation angle of the grid about its center point.
Definition AerialLiDAR.cpp:769
+
AerialLiDARcloud::disableMessages
void disableMessages(void)
Disable all print messages to the screen except for fatal error messages.
Definition AerialLiDAR.cpp:280
+
AerialLiDARcloud::getHitCount
uint getHitCount(void) const
Get the number of hit points in the point cloud.
Definition AerialLiDAR.cpp:372
+
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition AerialLiDAR.cpp:288
+
AerialLiDARcloud::calculateSyntheticLeafArea
void calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition AerialLiDAR.cu:1139
+
AerialLiDARcloud::calculateHitGridCell
void calculateHitGridCell()
Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
Definition AerialLiDAR.cpp:1611
+
AerialLiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(const uint index) const
Get ray direction of hit point in the scan based on its index.
Definition AerialLiDAR.cpp:428
+
AerialLiDARcloud::getScanExtent
helios::vec2 getScanExtent(const uint scanID) const
Get the (x,y) extent of scan surface.
Definition AerialLiDAR.cpp:383
+
AerialLiDARcloud::getGridCenter
helios::vec3 getGridCenter(void) const
Get the (x,y,z) coordinate of the grid center.
Definition AerialLiDAR.cpp:753
+
AerialLiDARcloud::gridindex2ijk
helios::int3 gridindex2ijk(const int index) const
Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-,...
Definition AerialLiDAR.cpp:716
+
AerialLiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(const uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition AerialLiDAR.cpp:404
+
AerialLiDARcloud::getGridResolution
helios::int3 getGridResolution(void) const
Get the total number of cells in the grid.
Definition AerialLiDAR.cpp:764
+
AerialLiDARcloud::enableMessages
void enableMessages(void)
Enable all print messages to the screen.
Definition AerialLiDAR.cpp:284
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition Context.cpp:7179
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition Context.cpp:7167
+
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Context.cpp:2046
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition Context.cpp:7187
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::atan2_2pi
float atan2_2pi(float y, float x)
Four quadrant arc tangent between 0 and 2*pi.
Definition global.cpp:584
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_aerial_li_d_a_r_8h.html b/doc/html/_aerial_li_d_a_r_8h.html index 1c97801e5..6356b35cf 100644 --- a/doc/html/_aerial_li_d_a_r_8h.html +++ b/doc/html/_aerial_li_d_a_r_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -121,7 +133,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_aerial_li_d_a_r_8h_source.html b/doc/html/_aerial_li_d_a_r_8h_source.html index b122d44a8..f191c169e 100644 --- a/doc/html/_aerial_li_d_a_r_8h_source.html +++ b/doc/html/_aerial_li_d_a_r_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
AerialLiDAR.h
@@ -100,10 +112,11 @@
21#include "Visualizer.h"
22
24
+
26struct AerialScanMetadata{
27
29
-
34 AerialScanMetadata( const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence );
+
34 AerialScanMetadata( const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence );
35
37 std::size_t Nrays;
38
@@ -122,7 +135,9 @@
59 float beamDivergence;
60
61};
+
62
+
64struct AerialHitPoint{
65 helios::vec3 position;
66 helios::SphericalCoord direction;
@@ -145,7 +160,9 @@
83 data = __data;
84 }
85};
+
86
+
88class AerialLiDARcloud{
89 private:
90
@@ -403,96 +420,99 @@
585 float getCellCoverFraction( const helios::int2 ij ) const;
586
587};
+
588
589
590#endif
-
AerialLiDARcloud
Primary class for aerial LiDAR scan.
Definition: AerialLiDAR.h:88
-
AerialLiDARcloud::getCellMaximumHitHeight
float getCellMaximumHitHeight(const helios::int2 ij) const
Get the height of the highest hit point at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1433
-
AerialLiDARcloud::getScanDensity
float getScanDensity(const uint scanID) const
Get the scan point density in points/m^2.
Definition: AerialLiDAR.cpp:397
-
AerialLiDARcloud::syntheticScan
void syntheticScan(helios::Context *context, const char *xml_file)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
Definition: AerialLiDAR.cu:625
-
AerialLiDARcloud::getScanConeAngle
float getScanConeAngle(const uint scanID) const
Get the scan cone angle in degrees.
Definition: AerialLiDAR.cpp:390
-
AerialLiDARcloud::setCellRbar
void setCellRbar(const float r_bar, const helios::int3 ijk)
Set the average ray propagation distance in meters.
Definition: AerialLiDAR.cpp:936
-
AerialLiDARcloud::getCellVegetationHeight
float getCellVegetationHeight(const helios::int2 ij) const
Get the height of the vegetation at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1391
+
AerialLiDARcloud
Primary class for aerial LiDAR scan.
Definition AerialLiDAR.h:88
+
AerialLiDARcloud::getCellMaximumHitHeight
float getCellMaximumHitHeight(const helios::int2 ij) const
Get the height of the highest hit point at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1433
+
AerialLiDARcloud::getScanDensity
float getScanDensity(const uint scanID) const
Get the scan point density in points/m^2.
Definition AerialLiDAR.cpp:397
+
AerialLiDARcloud::syntheticScan
void syntheticScan(helios::Context *context, const char *xml_file)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
Definition AerialLiDAR.cu:625
+
AerialLiDARcloud::getScanConeAngle
float getScanConeAngle(const uint scanID) const
Get the scan cone angle in degrees.
Definition AerialLiDAR.cpp:390
+
AerialLiDARcloud::setCellRbar
void setCellRbar(const float r_bar, const helios::int3 ijk)
Set the average ray propagation distance in meters.
Definition AerialLiDAR.cpp:936
+
AerialLiDARcloud::getCellVegetationHeight
float getCellVegetationHeight(const helios::int2 ij) const
Get the height of the vegetation at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1391
AerialLiDARcloud::readContextXML
void readContextXML(void)
Read all XML files currently loaded into the Helios context.
-
AerialLiDARcloud::getScanCenter
helios::vec3 getScanCenter(const uint scanID) const
Get the (x,y,z) of scan surface center.
Definition: AerialLiDAR.cpp:376
-
AerialLiDARcloud::getHitData
float getHitData(const uint index, const char *label) const
Get floating point data value associated with a hit point.
Definition: AerialLiDAR.cpp:439
-
AerialLiDARcloud::getHitGridCell
helios::int3 getHitGridCell(const uint index) const
Get the grid cell in which the hit point resides.
Definition: AerialLiDAR.cpp:504
-
AerialLiDARcloud::addScan
void addScan(const AerialScanMetadata newscan)
Add a LiDAR scan to the point cloud.
Definition: AerialLiDAR.cpp:292
-
AerialLiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, const uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition: AerialLiDAR.cpp:557
-
AerialLiDARcloud::selfTest
int selfTest(void)
Self-test (unit test) function.
Definition: AerialLiDAR.cpp:45
-
AerialLiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition: AerialLiDAR.cpp:418
-
AerialLiDARcloud::gridijk2index
int gridijk2index(const helios::int3 ijk) const
Use a grid cell's local index in the x-, y-, and z-directions to retrieve the cells' global index (ra...
Definition: AerialLiDAR.cpp:741
-
AerialLiDARcloud::getCellGroundHeight
float getCellGroundHeight(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1475
-
AerialLiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(const uint scanID) const
Divergence angle of the laser beam in radians.
Definition: AerialLiDAR.cpp:411
-
AerialLiDARcloud::setCellCoverFraction
void setCellCoverFraction(const float cover_fraction, const helios::int2 ij)
Set the ground cover fraction at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1547
-
AerialLiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(const helios::int3 ijk) const
Get the leaf area density of a grid cell in 1/m.
Definition: AerialLiDAR.cpp:855
+
AerialLiDARcloud::getScanCenter
helios::vec3 getScanCenter(const uint scanID) const
Get the (x,y,z) of scan surface center.
Definition AerialLiDAR.cpp:376
+
AerialLiDARcloud::getHitData
float getHitData(const uint index, const char *label) const
Get floating point data value associated with a hit point.
Definition AerialLiDAR.cpp:439
+
AerialLiDARcloud::getHitGridCell
helios::int3 getHitGridCell(const uint index) const
Get the grid cell in which the hit point resides.
Definition AerialLiDAR.cpp:504
+
AerialLiDARcloud::addScan
void addScan(const AerialScanMetadata newscan)
Add a LiDAR scan to the point cloud.
Definition AerialLiDAR.cpp:292
+
AerialLiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, const uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition AerialLiDAR.cpp:557
+
AerialLiDARcloud::selfTest
int selfTest(void)
Self-test (unit test) function.
Definition AerialLiDAR.cpp:45
+
AerialLiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition AerialLiDAR.cpp:418
+
AerialLiDARcloud::gridijk2index
int gridijk2index(const helios::int3 ijk) const
Use a grid cell's local index in the x-, y-, and z-directions to retrieve the cells' global index (ra...
Definition AerialLiDAR.cpp:741
+
AerialLiDARcloud::getCellGroundHeight
float getCellGroundHeight(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1475
+
AerialLiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(const uint scanID) const
Divergence angle of the laser beam in radians.
Definition AerialLiDAR.cpp:411
+
AerialLiDARcloud::setCellCoverFraction
void setCellCoverFraction(const float cover_fraction, const helios::int2 ij)
Set the ground cover fraction at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1547
+
AerialLiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(const helios::int3 ijk) const
Get the leaf area density of a grid cell in 1/m.
Definition AerialLiDAR.cpp:855
AerialLiDARcloud::scalarFilter
void scalarFilter(const char *scalar_field, const float threshold, const char *comparator)
Filter hit points based on a scalar field given by a column in the ASCII data.
-
AerialLiDARcloud::getCellSize
helios::vec3 getCellSize() const
Get the size of grid cells.
Definition: AerialLiDAR.cpp:794
-
AerialLiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU(const float Gtheta)
Calculate the leaf area for each grid volume.
Definition: AerialLiDAR.cu:287
-
AerialLiDARcloud::setCellMaximumHitHeight
void setCellMaximumHitHeight(const float height, const helios::int2 ij)
Set the height of the highest hit point at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1411
-
AerialLiDARcloud::getCellCenter
helios::vec3 getCellCenter(const helios::int3 ijk) const
Get the center of the (i,j,k)th grid cell.
Definition: AerialLiDAR.cpp:775
-
AerialLiDARcloud::setCellTransmissionProbability
void setCellTransmissionProbability(const int P_denom, const int P_trans, const helios::int3 ijk)
Set the cell transmission probability counts.
Definition: AerialLiDAR.cpp:881
-
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition: AerialLiDAR.cpp:296
-
AerialLiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition: AerialLiDAR.cpp:677
-
AerialLiDARcloud::setCellLeafArea
void setCellLeafArea(const float area, const helios::int3 ijk)
Set the leaf area of a grid cell in m^2.
Definition: AerialLiDAR.cpp:802
-
AerialLiDARcloud::setCellGroundHeight
void setCellGroundHeight(const float height, const helios::int2 ij)
Set the height of the ground at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1453
+
AerialLiDARcloud::getCellSize
helios::vec3 getCellSize() const
Get the size of grid cells.
Definition AerialLiDAR.cpp:794
+
AerialLiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU(const float Gtheta)
Calculate the leaf area for each grid volume.
Definition AerialLiDAR.cu:287
+
AerialLiDARcloud::setCellMaximumHitHeight
void setCellMaximumHitHeight(const float height, const helios::int2 ij)
Set the height of the highest hit point at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1411
+
AerialLiDARcloud::getCellCenter
helios::vec3 getCellCenter(const helios::int3 ijk) const
Get the center of the (i,j,k)th grid cell.
Definition AerialLiDAR.cpp:775
+
AerialLiDARcloud::setCellTransmissionProbability
void setCellTransmissionProbability(const int P_denom, const int P_trans, const helios::int3 ijk)
Set the cell transmission probability counts.
Definition AerialLiDAR.cpp:881
+
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition AerialLiDAR.cpp:296
+
AerialLiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition AerialLiDAR.cpp:677
+
AerialLiDARcloud::setCellLeafArea
void setCellLeafArea(const float area, const helios::int3 ijk)
Set the leaf area of a grid cell in m^2.
Definition AerialLiDAR.cpp:802
+
AerialLiDARcloud::setCellGroundHeight
void setCellGroundHeight(const float height, const helios::int2 ij)
Set the height of the ground at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1453
AerialLiDARcloud::exportPointCloud
void exportPointCloud(const char *filename)
Export to file all points in the point cloud.
-
AerialLiDARcloud::getGridExtent
helios::vec3 getGridExtent(void) const
Get the size of the global grid in the x-, y-, and z-directions.
Definition: AerialLiDAR.cpp:758
-
AerialLiDARcloud::getCellTransmissionProbability
void getCellTransmissionProbability(const helios::int3 ijk, int &P_denom, int &P_trans) const
Get the cell transmission probability counts.
Definition: AerialLiDAR.cpp:910
-
AerialLiDARcloud::doesHitDataExist
bool doesHitDataExist(const uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition: AerialLiDAR.cpp:467
-
AerialLiDARcloud::deleteHitPoint
void deleteHitPoint(const uint index)
Delete a hit point in the scan.
Definition: AerialLiDAR.cpp:356
-
AerialLiDARcloud::getCellLeafArea
float getCellLeafArea(const helios::int3 ijk) const
Get the leaf area of a grid cell in m^2.
Definition: AerialLiDAR.cpp:831
-
AerialLiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition: fileIO.cpp:22
-
AerialLiDARcloud::getHitScanID
int getHitScanID(const uint index) const
Get the scan with which a hit is associated.
Definition: AerialLiDAR.cpp:493
-
AerialLiDARcloud::getGridRotation
float getGridRotation() const
Get the azimuthal rotation angle of the grid about its center point.
Definition: AerialLiDAR.cpp:769
-
AerialLiDARcloud::disableMessages
void disableMessages(void)
Disable all print messages to the screen except for fatal error messages.
Definition: AerialLiDAR.cpp:280
-
AerialLiDARcloud::getHitCount
uint getHitCount(void) const
Get the number of hit points in the point cloud.
Definition: AerialLiDAR.cpp:372
-
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition: AerialLiDAR.cpp:288
-
AerialLiDARcloud::calculateSyntheticLeafArea
void calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition: AerialLiDAR.cu:1139
-
AerialLiDARcloud::setHitData
void setHitData(const uint index, const char *label, const float value)
Set floating point data value associated with a hit point.
Definition: AerialLiDAR.cpp:456
-
AerialLiDARcloud::calculateHitGridCell
void calculateHitGridCell()
Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
Definition: AerialLiDAR.cpp:1611
-
AerialLiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(const uint index) const
Get ray direction of hit point in the scan based on its index.
Definition: AerialLiDAR.cpp:428
-
AerialLiDARcloud::getCellCoverFraction
float getCellCoverFraction(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1569
-
AerialLiDARcloud::AerialLiDARcloud
AerialLiDARcloud(void)
Aerial LiDAR point cloud constructor.
Definition: AerialLiDAR.cpp:33
+
AerialLiDARcloud::getGridExtent
helios::vec3 getGridExtent(void) const
Get the size of the global grid in the x-, y-, and z-directions.
Definition AerialLiDAR.cpp:758
+
AerialLiDARcloud::getCellTransmissionProbability
void getCellTransmissionProbability(const helios::int3 ijk, int &P_denom, int &P_trans) const
Get the cell transmission probability counts.
Definition AerialLiDAR.cpp:910
+
AerialLiDARcloud::doesHitDataExist
bool doesHitDataExist(const uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition AerialLiDAR.cpp:467
+
AerialLiDARcloud::deleteHitPoint
void deleteHitPoint(const uint index)
Delete a hit point in the scan.
Definition AerialLiDAR.cpp:356
+
AerialLiDARcloud::getCellLeafArea
float getCellLeafArea(const helios::int3 ijk) const
Get the leaf area of a grid cell in m^2.
Definition AerialLiDAR.cpp:831
+
AerialLiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition fileIO.cpp:22
+
AerialLiDARcloud::getHitScanID
int getHitScanID(const uint index) const
Get the scan with which a hit is associated.
Definition AerialLiDAR.cpp:493
+
AerialLiDARcloud::getGridRotation
float getGridRotation() const
Get the azimuthal rotation angle of the grid about its center point.
Definition AerialLiDAR.cpp:769
+
AerialLiDARcloud::disableMessages
void disableMessages(void)
Disable all print messages to the screen except for fatal error messages.
Definition AerialLiDAR.cpp:280
+
AerialLiDARcloud::getHitCount
uint getHitCount(void) const
Get the number of hit points in the point cloud.
Definition AerialLiDAR.cpp:372
+
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition AerialLiDAR.cpp:288
+
AerialLiDARcloud::calculateSyntheticLeafArea
void calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition AerialLiDAR.cu:1139
+
AerialLiDARcloud::setHitData
void setHitData(const uint index, const char *label, const float value)
Set floating point data value associated with a hit point.
Definition AerialLiDAR.cpp:456
+
AerialLiDARcloud::calculateHitGridCell
void calculateHitGridCell()
Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
Definition AerialLiDAR.cpp:1611
+
AerialLiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(const uint index) const
Get ray direction of hit point in the scan based on its index.
Definition AerialLiDAR.cpp:428
+
AerialLiDARcloud::getCellCoverFraction
float getCellCoverFraction(const helios::int2 ij) const
Get the height of the ground at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1569
+
AerialLiDARcloud::AerialLiDARcloud
AerialLiDARcloud(void)
Aerial LiDAR point cloud constructor.
Definition AerialLiDAR.cpp:33
AerialLiDARcloud::distanceFilter
void distanceFilter(const float maxdistance)
Filter scan by imposing a maximum distance from the scanner.
-
AerialLiDARcloud::~AerialLiDARcloud
~AerialLiDARcloud(void)
Aerial LiDAR point cloud destructor.
Definition: AerialLiDAR.cpp:41
-
AerialLiDARcloud::getScanExtent
helios::vec2 getScanExtent(const uint scanID) const
Get the (x,y) extent of scan surface.
Definition: AerialLiDAR.cpp:383
-
AerialLiDARcloud::getGridCenter
helios::vec3 getGridCenter(void) const
Get the (x,y,z) coordinate of the grid center.
Definition: AerialLiDAR.cpp:753
+
AerialLiDARcloud::~AerialLiDARcloud
~AerialLiDARcloud(void)
Aerial LiDAR point cloud destructor.
Definition AerialLiDAR.cpp:41
+
AerialLiDARcloud::getScanExtent
helios::vec2 getScanExtent(const uint scanID) const
Get the (x,y) extent of scan surface.
Definition AerialLiDAR.cpp:383
+
AerialLiDARcloud::getGridCenter
helios::vec3 getGridCenter(void) const
Get the (x,y,z) coordinate of the grid center.
Definition AerialLiDAR.cpp:753
AerialLiDARcloud::reflectanceFilter
void reflectanceFilter(const float minreflectance)
Filter scan by imposing a minimum reflectance value.
-
AerialLiDARcloud::gridindex2ijk
helios::int3 gridindex2ijk(const int index) const
Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-,...
Definition: AerialLiDAR.cpp:716
-
AerialLiDARcloud::getCellRbar
float getCellRbar(const helios::int3 ijk) const
Get the average ray propagation distance in meters.
Definition: AerialLiDAR.cpp:965
-
AerialLiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(const uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition: AerialLiDAR.cpp:404
-
AerialLiDARcloud::getGridResolution
helios::int3 getGridResolution(void) const
Get the total number of cells in the grid.
Definition: AerialLiDAR.cpp:764
-
AerialLiDARcloud::enableMessages
void enableMessages(void)
Enable all print messages to the screen.
Definition: AerialLiDAR.cpp:284
-
AerialLiDARcloud::getHitColor
helios::RGBcolor getHitColor(const uint index) const
Get color of hit point.
Definition: AerialLiDAR.cpp:482
-
AerialLiDARcloud::setCellVegetationHeight
void setCellVegetationHeight(const float height, const helios::int2 ij)
Set the height of the vegetation at the (x,y) location of this gridcell.
Definition: AerialLiDAR.cpp:1369
-
AerialLiDARcloud::setHitGridCell
void setHitGridCell(const uint index, const helios::int3 ijk)
Set the grid cell in which the hit point resides.
Definition: AerialLiDAR.cpp:518
-
AerialLiDARcloud::generateHeightModel
void generateHeightModel(const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation)
Determine the ground and vegetation height for each x-y grid cell. Inputs to this function are parame...
Definition: AerialLiDAR.cpp:1071
-
AerialLiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition: AerialLiDAR.cpp:623
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
AerialHitPoint
Structure containing metadata for an aerial hit point.
Definition: AerialLiDAR.h:64
-
AerialScanMetadata
Structure containing metadata for an aerial scan.
Definition: AerialLiDAR.h:26
-
AerialScanMetadata::Nrays
std::size_t Nrays
Number of laser pulses in scan.
Definition: AerialLiDAR.h:37
-
AerialScanMetadata::extent
helios::vec2 extent
(x,y) size/extent of scan surface
Definition: AerialLiDAR.h:43
-
AerialScanMetadata::coneangle
float coneangle
Width of scan cone in degrees.
Definition: AerialLiDAR.h:46
-
AerialScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition: AerialLiDAR.h:59
-
AerialScanMetadata::center
helios::vec3 center
(x,y,z) position of scan surface center
Definition: AerialLiDAR.h:40
-
AerialScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition: AerialLiDAR.h:53
-
AerialScanMetadata::scandensity
float scandensity
Scan density in points/m^2.
Definition: AerialLiDAR.h:49
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec4
Vector of four elements of type 'float'.
Definition: helios_vector_types.h:673
+
AerialLiDARcloud::gridindex2ijk
helios::int3 gridindex2ijk(const int index) const
Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-,...
Definition AerialLiDAR.cpp:716
+
AerialLiDARcloud::getCellRbar
float getCellRbar(const helios::int3 ijk) const
Get the average ray propagation distance in meters.
Definition AerialLiDAR.cpp:965
+
AerialLiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(const uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition AerialLiDAR.cpp:404
+
AerialLiDARcloud::getGridResolution
helios::int3 getGridResolution(void) const
Get the total number of cells in the grid.
Definition AerialLiDAR.cpp:764
+
AerialLiDARcloud::enableMessages
void enableMessages(void)
Enable all print messages to the screen.
Definition AerialLiDAR.cpp:284
+
AerialLiDARcloud::getHitColor
helios::RGBcolor getHitColor(const uint index) const
Get color of hit point.
Definition AerialLiDAR.cpp:482
+
AerialLiDARcloud::setCellVegetationHeight
void setCellVegetationHeight(const float height, const helios::int2 ij)
Set the height of the vegetation at the (x,y) location of this gridcell.
Definition AerialLiDAR.cpp:1369
+
AerialLiDARcloud::setHitGridCell
void setHitGridCell(const uint index, const helios::int3 ijk)
Set the grid cell in which the hit point resides.
Definition AerialLiDAR.cpp:518
+
AerialLiDARcloud::generateHeightModel
void generateHeightModel(const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation)
Determine the ground and vegetation height for each x-y grid cell. Inputs to this function are parame...
Definition AerialLiDAR.cpp:1071
+
AerialLiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition AerialLiDAR.cpp:623
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
AerialHitPoint
Structure containing metadata for an aerial hit point.
Definition AerialLiDAR.h:64
+
AerialScanMetadata
Structure containing metadata for an aerial scan.
Definition AerialLiDAR.h:26
+
AerialScanMetadata::Nrays
std::size_t Nrays
Number of laser pulses in scan.
Definition AerialLiDAR.h:37
+
AerialScanMetadata::extent
helios::vec2 extent
(x,y) size/extent of scan surface
Definition AerialLiDAR.h:43
+
AerialScanMetadata::coneangle
float coneangle
Width of scan cone in degrees.
Definition AerialLiDAR.h:46
+
AerialScanMetadata::AerialScanMetadata
AerialScanMetadata(const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence)
Create an aerial LiDAR scan data structure.
Definition AerialLiDAR.cpp:21
+
AerialScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition AerialLiDAR.h:59
+
AerialScanMetadata::center
helios::vec3 center
(x,y,z) position of scan surface center
Definition AerialLiDAR.h:40
+
AerialScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition AerialLiDAR.h:53
+
AerialScanMetadata::scandensity
float scandensity
Scan density in points/m^2.
Definition AerialLiDAR.h:49
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec4
Vector of four elements of type 'float'.
Definition helios_vector_types.h:673
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_aerial_li_d_a_r_doc.html b/doc/html/_aerial_li_d_a_r_doc.html index 54b927f67..57218f947 100644 --- a/doc/html/_aerial_li_d_a_r_doc.html +++ b/doc/html/_aerial_li_d_a_r_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Aerial LiDAR Point Cloud Plugin Documentation
+
Aerial LiDAR Point Cloud Plugin Documentation

Table of Contents

-
@@ -152,13 +195,13 @@

Package
-td
+
-td
+
-td + NVIDIA CUDA 9.0+ Mac OSX:
$ brew install Caskroom/cask/cuda
Use CUDA installer Use CUDA installer @@ -282,11 +325,12 @@

-

+

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_assets_8cpp.html b/doc/html/_assets_8cpp.html index e9979f9b6..af59c576b 100644 --- a/doc/html/_assets_8cpp.html +++ b/doc/html/_assets_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Functions
@@ -100,131 +112,131 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Functions

uint GenericLeafPrototype (helios::Context *context_ptr, LeafPrototype *prototype_parameters, int compound_leaf_index)
uint GenericLeafPrototype (helios::Context *context_ptr, LeafPrototype *prototype_parameters, int compound_leaf_index)
 
uint AlmondFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint AlmondFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint AlmondFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint AlmondFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void AlmondPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void AlmondPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void AlmondPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
void AlmondPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
 
uint AppleFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint AppleFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint AppleFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint AppleFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void ApplePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void ApplePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void ApplePhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
void ApplePhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
 
uint AsparagusLeafPrototype (helios::Context *context_ptr, LeafPrototype *prototype_parameters, int compound_leaf_index)
uint AsparagusLeafPrototype (helios::Context *context_ptr, LeafPrototype *prototype_parameters, int compound_leaf_index)
 
void AsparagusPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void AsparagusPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint BeanLeafPrototype_unifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
uint BeanLeafPrototype_unifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
 
uint BeanLeafPrototype_trifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
uint BeanLeafPrototype_trifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
 
uint BeanFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint BeanFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint BeanFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint BeanFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void BeanPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void BeanPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint BindweedFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint BindweedFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
uint CheeseweedLeafPrototype (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
uint CheeseweedLeafPrototype (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
 
uint CowpeaLeafPrototype_unifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
uint CowpeaLeafPrototype_unifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
 
uint CowpeaLeafPrototype_trifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
uint CowpeaLeafPrototype_trifoliate_OBJ (helios::Context *context_ptr, uint subdivisions, int compound_leaf_index)
 
uint CowpeaFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint CowpeaFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint CowpeaFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint CowpeaFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void CowpeaPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void CowpeaPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
float random_float (float min, float max)
float random_float (float min, float max)
 
bool spheres_overlap (const helios::vec3 &center1, float radius1, const helios::vec3 &center2, float radius2)
bool spheres_overlap (const helios::vec3 &center1, float radius1, const helios::vec3 &center2, float radius2)
 
uint GrapevineFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint GrapevineFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
void GrapevinePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void GrapevinePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint MaizeTasselPrototype (helios::Context *context_ptr, uint subdivisions)
uint MaizeTasselPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint MaizeEarPrototype (helios::Context *context_ptr, uint subdivisions)
uint MaizeEarPrototype (helios::Context *context_ptr, uint subdivisions)
 
void MaizePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void MaizePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint OliveLeafPrototype (helios::Context *context_ptr, LeafPrototype *prototype_parameters, int compound_leaf_index)
uint OliveLeafPrototype (helios::Context *context_ptr, LeafPrototype *prototype_parameters, int compound_leaf_index)
 
uint OliveFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint OliveFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint OliveFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint OliveFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void OlivePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void OlivePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void OlivePhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
void OlivePhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
 
uint PistachioFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint PistachioFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint PistachioFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint PistachioFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void PistachioPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void PistachioPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void PistachioPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
void PistachioPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
 
uint PuncturevineFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint PuncturevineFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
uint RedbudFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint RedbudFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
uint RedbudFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint RedbudFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
void RedbudPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void RedbudPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void RedbudPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
void RedbudPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
 
uint RiceSpikePrototype (helios::Context *context_ptr, uint subdivisions)
uint RiceSpikePrototype (helios::Context *context_ptr, uint subdivisions)
 
void RicePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void RicePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void ButterLettucePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void ButterLettucePhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint SorghumPaniclePrototype (helios::Context *context_ptr, uint subdivisions)
uint SorghumPaniclePrototype (helios::Context *context_ptr, uint subdivisions)
 
void SorghumPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void SorghumPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint SoybeanFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint SoybeanFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint SoybeanFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint SoybeanFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void SoybeanPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void SoybeanPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint StrawberryFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint StrawberryFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
uint StrawberryFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint StrawberryFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint TomatoFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint TomatoFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint TomatoFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint TomatoFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void TomatoPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void TomatoPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
uint WalnutFruitPrototype (helios::Context *context_ptr, uint subdivisions)
uint WalnutFruitPrototype (helios::Context *context_ptr, uint subdivisions)
 
uint WalnutFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
uint WalnutFlowerPrototype (helios::Context *context_ptr, uint subdivisions, bool flower_is_open)
 
void WalnutPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void WalnutPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 
void WalnutPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
void WalnutPhytomerCallbackFunction (std::shared_ptr< Phytomer > phytomer)
 
uint WheatSpikePrototype (helios::Context *context_ptr, uint subdivisions)
uint WheatSpikePrototype (helios::Context *context_ptr, uint subdivisions)
 
void WheatPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
void WheatPhytomerCreationFunction (std::shared_ptr< Phytomer > phytomer, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
 

Detailed Description

@@ -244,25 +256,17 @@

uint AlmondFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -280,19 +284,12 @@

uint AlmondFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -310,8 +307,7 @@

void AlmondPhytomerCallbackFunction ( - std::shared_ptr< Phytomer >  - phytomer) + std::shared_ptr< Phytomer > phytomer) @@ -330,37 +326,27 @@

void AlmondPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -378,25 +364,17 @@

uint AppleFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -414,19 +392,12 @@

uint AppleFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -444,8 +415,7 @@

void ApplePhytomerCallbackFunction ( - std::shared_ptr< Phytomer >  - phytomer) + std::shared_ptr< Phytomer > phytomer) @@ -464,37 +434,27 @@

void ApplePhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -512,25 +472,17 @@

uint AsparagusLeafPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - LeafPrototype *  - prototype_parameters, + LeafPrototype * prototype_parameters, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -548,37 +500,27 @@

void AsparagusPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -596,25 +538,17 @@

uint BeanFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -632,19 +566,12 @@

uint BeanFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -662,25 +589,17 @@

uint BeanLeafPrototype_trifoliate_OBJ ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -698,25 +617,17 @@

uint BeanLeafPrototype_unifoliate_OBJ ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -734,37 +645,27 @@

void BeanPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -782,25 +683,17 @@

uint BindweedFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -818,37 +711,27 @@

void ButterLettucePhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -866,25 +749,17 @@

uint CheeseweedLeafPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -902,25 +777,17 @@

uint CowpeaFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -938,19 +805,12 @@

uint CowpeaFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -968,25 +828,17 @@

uint CowpeaLeafPrototype_trifoliate_OBJ ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -1004,25 +856,17 @@

uint CowpeaLeafPrototype_unifoliate_OBJ ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -1040,37 +884,27 @@

void CowpeaPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1088,25 +922,17 @@

uint GenericLeafPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - LeafPrototype *  - prototype_parameters, + LeafPrototype * prototype_parameters, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -1124,19 +950,12 @@

uint GrapevineFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1154,37 +973,27 @@

void GrapevinePhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1202,19 +1011,12 @@

uint MaizeEarPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1232,37 +1034,27 @@

void MaizePhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1280,19 +1072,12 @@

uint MaizeTasselPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1310,25 +1095,17 @@

uint OliveFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -1346,19 +1123,12 @@

uint OliveFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1376,25 +1146,17 @@

uint OliveLeafPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - LeafPrototype *  - prototype_parameters, + LeafPrototype * prototype_parameters, - int  - compound_leaf_index  - - - - ) - + int compound_leaf_index )

@@ -1412,8 +1174,7 @@

void OlivePhytomerCallbackFunction ( - std::shared_ptr< Phytomer >  - phytomer) + std::shared_ptr< Phytomer > phytomer) @@ -1432,37 +1193,27 @@

void OlivePhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1480,25 +1231,17 @@

uint PistachioFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -1516,19 +1259,12 @@

uint PistachioFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1546,8 +1282,7 @@

void PistachioPhytomerCallbackFunction ( - std::shared_ptr< Phytomer >  - phytomer) + std::shared_ptr< Phytomer > phytomer) @@ -1566,37 +1301,27 @@

void PistachioPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1614,25 +1339,17 @@

uint PuncturevineFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -1650,19 +1367,12 @@

float random_float ( - float  - min, + float min, - float  - max  - - - - ) - + float max )

@@ -1680,25 +1390,17 @@

uint RedbudFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -1716,19 +1418,12 @@

uint RedbudFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1746,8 +1441,7 @@

void RedbudPhytomerCallbackFunction ( - std::shared_ptr< Phytomer >  - phytomer) + std::shared_ptr< Phytomer > phytomer) @@ -1766,37 +1460,27 @@

void RedbudPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1814,37 +1498,27 @@

void RicePhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1862,19 +1536,12 @@

uint RiceSpikePrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1892,19 +1559,12 @@

uint SorghumPaniclePrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -1922,37 +1582,27 @@

void SorghumPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -1970,25 +1620,17 @@

uint SoybeanFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -2006,19 +1648,12 @@

uint SoybeanFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -2036,37 +1671,27 @@

void SoybeanPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -2084,31 +1709,22 @@

bool spheres_overlap ( - const helios::vec3 &  - center1, + const helios::vec3 & center1, - float  - radius1, + float radius1, - const helios::vec3 &  - center2, + const helios::vec3 & center2, - float  - radius2  - - - - ) - + float radius2 )

@@ -2126,25 +1742,17 @@

uint StrawberryFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -2162,19 +1770,12 @@

uint StrawberryFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -2192,25 +1793,17 @@

uint TomatoFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -2228,19 +1821,12 @@

uint TomatoFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -2258,37 +1844,27 @@

void TomatoPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -2306,25 +1882,17 @@

uint WalnutFlowerPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions, + uint subdivisions, - bool  - flower_is_open  - - - - ) - + bool flower_is_open )

@@ -2342,19 +1910,12 @@

uint WalnutFruitPrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -2372,8 +1933,7 @@

void WalnutPhytomerCallbackFunction ( - std::shared_ptr< Phytomer >  - phytomer) + std::shared_ptr< Phytomer > phytomer) @@ -2392,37 +1952,27 @@

void WalnutPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -2440,37 +1990,27 @@

void WheatPhytomerCreationFunction ( - std::shared_ptr< Phytomer >  - phytomer, + std::shared_ptr< Phytomer > phytomer, - uint  - shoot_node_index, + uint shoot_node_index, - uint  - parent_shoot_node_index, + uint parent_shoot_node_index, - uint  - shoot_max_nodes, + uint shoot_max_nodes, - float  - plant_age  - - - - ) - + float plant_age )

@@ -2488,19 +2028,12 @@

uint WheatSpikePrototype ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - uint  - subdivisions  - - - - ) - + uint subdivisions )

@@ -2512,7 +2045,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_assets_8cpp_source.html b/doc/html/_assets_8cpp_source.html index 8d2f85007..8aac2d56b 100644 --- a/doc/html/_assets_8cpp_source.html +++ b/doc/html/_assets_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Assets.cpp
@@ -980,60 +992,61 @@
900
901}
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition: Context.cpp:7139
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition: Context.cpp:2847
-
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition: Context_data.cpp:2299
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition: Context.cpp:2907
-
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition: Context.cpp:1578
-
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition: Context_fileIO.cpp:3742
-
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition: Context.cpp:1491
-
helios::Context::scalePrimitiveAboutPoint
void scalePrimitiveAboutPoint(uint UUID, const helios::vec3 &S, const helios::vec3 point)
Scale a primitive using its UUID about an arbitrary point in space.
Definition: Context.cpp:1512
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:4728
-
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition: Context.cpp:5399
-
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:5646
-
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:5930
-
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:5809
-
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition: global.cpp:223
-
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition: global.cpp:1100
-
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition: global.cpp:576
-
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition: global.cpp:1146
-
helios::resize_vector
void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
Resize 2D C++ vector.
Definition: global.cpp:1239
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
- -
LeafPrototype::subdivisions
uint subdivisions
Leaf subdivision count in each direction.
Definition: PlantArchitecture.h:375
-
LeafPrototype::leaf_texture_file
std::map< int, std::string > leaf_texture_file
Image texture file for the leaf.
Definition: PlantArchitecture.h:342
-
LeafPrototype::lateral_curvature
RandomParameter_float lateral_curvature
Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
Definition: PlantArchitecture.h:354
-
LeafPrototype::petiole_roll
RandomParameter_float petiole_roll
Creates a rolling at the leaf where the petiole attaches to the leaf blade.
Definition: PlantArchitecture.h:357
-
LeafPrototype::build_petiolule
bool build_petiolule
Add a petiolule to the base of the leaflet.
Definition: PlantArchitecture.h:381
-
LeafPrototype::wave_period
RandomParameter_float wave_period
Period factor of leaf waves (sets how many waves there are along the leaf length)
Definition: PlantArchitecture.h:361
-
LeafPrototype::leaf_offset
helios::vec3 leaf_offset
Amount to shift the leaf.
Definition: PlantArchitecture.h:372
-
LeafPrototype::leaf_buckle_angle
RandomParameter_float leaf_buckle_angle
Angle of the leaf buckle (degrees)
Definition: PlantArchitecture.h:369
-
LeafPrototype::leaf_buckle_length
RandomParameter_float leaf_buckle_length
Fraction of the leaf length where the leaf buckles under its weight.
Definition: PlantArchitecture.h:367
-
LeafPrototype::midrib_fold_fraction
RandomParameter_float midrib_fold_fraction
Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded ...
Definition: PlantArchitecture.h:348
-
LeafPrototype::wave_amplitude
RandomParameter_float wave_amplitude
Amplitude of leaf waves (sets the height of leaf waves)
Definition: PlantArchitecture.h:363
-
LeafPrototype::OBJ_model_file
std::string OBJ_model_file
OBJ model file to load for the leaf.
Definition: PlantArchitecture.h:336
-
LeafPrototype::longitudinal_curvature
RandomParameter_float longitudinal_curvature
Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward,...
Definition: PlantArchitecture.h:352
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition Context.cpp:7139
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition Context.cpp:2847
+
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition Context_data.cpp:2299
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition Context.cpp:2907
+
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition Context.cpp:1578
+
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition Context_fileIO.cpp:3742
+
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition Context.cpp:1491
+
helios::Context::scalePrimitiveAboutPoint
void scalePrimitiveAboutPoint(uint UUID, const helios::vec3 &S, const helios::vec3 point)
Scale a primitive using its UUID about an arbitrary point in space.
Definition Context.cpp:1512
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:4728
+
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition Context.cpp:5399
+
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:5646
+
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:5930
+
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:5809
+
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition global.cpp:223
+
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition global.cpp:1100
+
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition global.cpp:576
+
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition global.cpp:1146
+
helios::resize_vector
void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
Resize 2D C++ vector.
Definition global.cpp:1239
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+ +
LeafPrototype::subdivisions
uint subdivisions
Leaf subdivision count in each direction.
Definition PlantArchitecture.h:375
+
LeafPrototype::leaf_texture_file
std::map< int, std::string > leaf_texture_file
Image texture file for the leaf.
Definition PlantArchitecture.h:342
+
LeafPrototype::lateral_curvature
RandomParameter_float lateral_curvature
Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
Definition PlantArchitecture.h:354
+
LeafPrototype::petiole_roll
RandomParameter_float petiole_roll
Creates a rolling at the leaf where the petiole attaches to the leaf blade.
Definition PlantArchitecture.h:357
+
LeafPrototype::build_petiolule
bool build_petiolule
Add a petiolule to the base of the leaflet.
Definition PlantArchitecture.h:381
+
LeafPrototype::wave_period
RandomParameter_float wave_period
Period factor of leaf waves (sets how many waves there are along the leaf length)
Definition PlantArchitecture.h:361
+
LeafPrototype::leaf_offset
helios::vec3 leaf_offset
Amount to shift the leaf.
Definition PlantArchitecture.h:372
+
LeafPrototype::leaf_buckle_angle
RandomParameter_float leaf_buckle_angle
Angle of the leaf buckle (degrees)
Definition PlantArchitecture.h:369
+
LeafPrototype::leaf_buckle_length
RandomParameter_float leaf_buckle_length
Fraction of the leaf length where the leaf buckles under its weight.
Definition PlantArchitecture.h:367
+
LeafPrototype::midrib_fold_fraction
RandomParameter_float midrib_fold_fraction
Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded ...
Definition PlantArchitecture.h:348
+
LeafPrototype::wave_amplitude
RandomParameter_float wave_amplitude
Amplitude of leaf waves (sets the height of leaf waves)
Definition PlantArchitecture.h:363
+
LeafPrototype::OBJ_model_file
std::string OBJ_model_file
OBJ model file to load for the leaf.
Definition PlantArchitecture.h:336
+
LeafPrototype::longitudinal_curvature
RandomParameter_float longitudinal_curvature
Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward,...
Definition PlantArchitecture.h:352
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_assets_8h_source.html b/doc/html/_assets_8h_source.html index a7f5ef2d8..94cc86ff6 100644 --- a/doc/html/_assets_8h_source.html +++ b/doc/html/_assets_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Assets.h
@@ -182,12 +194,13 @@
88
89
90#endif //HELIOS_ASSETS_H
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
- +
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_b_l_conductance_doc.html b/doc/html/_b_l_conductance_doc.html index 0300cec2c..7c0b34d6f 100644 --- a/doc/html/_b_l_conductance_doc.html +++ b/doc/html/_b_l_conductance_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Boundary-Layer Conductance Model Plugin Documentation
+
Boundary-Layer Conductance Model Plugin Documentation

Table of Contents

-


@@ -236,7 +282,7 @@

// This changes the boundary-layer conductance model for the second primitive (while the first will keep the model set above)
boundarylayerconductance.setBoundaryLayerModel( UUID1, "ground" );
-
BLConductanceModel
Boundary-layer conductance model class.
Definition: BoundaryLayerConductanceModel.h:23
+
BLConductanceModel
Boundary-layer conductance model class.
Definition BoundaryLayerConductanceModel.h:23

Running the Model

The model can be run to calculate the boundary-layer conductance for all primitives or a sub-set of primitives using the appropriate run function below.

@@ -253,7 +299,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_boundary_layer_conductance_model_8cpp.html b/doc/html/_boundary_layer_conductance_model_8cpp.html index 5bb9e2c2f..c20f9c89e 100644 --- a/doc/html/_boundary_layer_conductance_model_8cpp.html +++ b/doc/html/_boundary_layer_conductance_model_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
BoundaryLayerConductanceModel.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_boundary_layer_conductance_model_8cpp_source.html b/doc/html/_boundary_layer_conductance_model_8cpp_source.html index 606aa11a9..fa1976891 100644 --- a/doc/html/_boundary_layer_conductance_model_8cpp_source.html +++ b/doc/html/_boundary_layer_conductance_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
BoundaryLayerConductanceModel.cpp
@@ -97,6 +109,7 @@
17
18using namespace helios;
19
+
20BLConductanceModel::BLConductanceModel( helios::Context* __context ){
21
22 wind_speed_default = 1.f;
@@ -111,7 +124,9 @@
31 context = __context;
32
33}
+
34
+
35int BLConductanceModel::selfTest(){
36
37 std::cout << "Running boundary-layer conductance model self-test..." << std::flush;
@@ -162,25 +177,35 @@
82 return 0;
83
84}
+
85
+
86void BLConductanceModel::enableMessages(){
87 message_flag = true;
88}
+
89
+
90void BLConductanceModel::disableMessages(){
91 message_flag = false;
92}
+
93
+
94void BLConductanceModel::setBoundaryLayerModel( const char* gH_model ){
95 std::vector<uint> UUIDs = context->getAllUUIDs();
96 setBoundaryLayerModel(UUIDs,gH_model);
97}
+
98
+
99void BLConductanceModel::setBoundaryLayerModel( uint UUID, const char* gH_model ){
100 std::vector<uint> UUIDs{UUID};
101 setBoundaryLayerModel(UUIDs,gH_model);
102}
+
103
+
104void BLConductanceModel::setBoundaryLayerModel(const std::vector<uint> &UUIDs, const char* gH_model ){
105
106 uint model = 0;
@@ -203,13 +228,17 @@
123 }
124
125}
+
126
+
127void BLConductanceModel::run(){
128
129 run( context->getAllUUIDs() );
130
131}
+
132
+
133void BLConductanceModel::run(const std::vector<uint> &UUIDs ){
134
135 for( uint UUID : UUIDs ){
@@ -268,6 +297,7 @@
188 }
189
190}
+
191
192float BLConductanceModel::calculateBoundaryLayerConductance( uint gH_model, float U, float L, char Nsides, float inclination, float TL, float Ta ){
193
@@ -350,35 +380,36 @@
270
271}
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
BLConductanceModel
Boundary-layer conductance model class.
Definition: BoundaryLayerConductanceModel.h:23
-
BLConductanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: BoundaryLayerConductanceModel.cpp:90
-
BLConductanceModel::setBoundaryLayerModel
void setBoundaryLayerModel(const char *gH_model)
Set the boundary-layer conductance model to be used for all primitives in the Context.
Definition: BoundaryLayerConductanceModel.cpp:94
- -
BLConductanceModel::run
void run()
Run boundary-layer conductance calculations for all primitives in the Context.
Definition: BoundaryLayerConductanceModel.cpp:127
-
BLConductanceModel::BLConductanceModel
BLConductanceModel(helios::Context *context)
Constructor.
Definition: BoundaryLayerConductanceModel.cpp:20
-
BLConductanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition: BoundaryLayerConductanceModel.cpp:86
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition: Context.cpp:7920
-
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition: Context.cpp:7104
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
BLConductanceModel
Boundary-layer conductance model class.
Definition BoundaryLayerConductanceModel.h:23
+
BLConductanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition BoundaryLayerConductanceModel.cpp:90
+
BLConductanceModel::setBoundaryLayerModel
void setBoundaryLayerModel(const char *gH_model)
Set the boundary-layer conductance model to be used for all primitives in the Context.
Definition BoundaryLayerConductanceModel.cpp:94
+ +
BLConductanceModel::run
void run()
Run boundary-layer conductance calculations for all primitives in the Context.
Definition BoundaryLayerConductanceModel.cpp:127
+
BLConductanceModel::BLConductanceModel
BLConductanceModel(helios::Context *context)
Constructor.
Definition BoundaryLayerConductanceModel.cpp:20
+
BLConductanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition BoundaryLayerConductanceModel.cpp:86
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition Context.cpp:7920
+
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition Context.cpp:7104
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_boundary_layer_conductance_model_8h.html b/doc/html/_boundary_layer_conductance_model_8h.html index 9c6098da4..6551ce1b3 100644 --- a/doc/html/_boundary_layer_conductance_model_8h.html +++ b/doc/html/_boundary_layer_conductance_model_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -114,7 +126,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_boundary_layer_conductance_model_8h_source.html b/doc/html/_boundary_layer_conductance_model_8h_source.html index d784a26ac..95c3f3965 100644 --- a/doc/html/_boundary_layer_conductance_model_8h_source.html +++ b/doc/html/_boundary_layer_conductance_model_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
BoundaryLayerConductanceModel.h
@@ -99,11 +111,12 @@
19#include "Context.h"
20
22
+
23class BLConductanceModel{
24public:
25
27
-
30 BLConductanceModel( helios::Context* context );
+
30 BLConductanceModel( helios::Context* context );
31
33
36 int selfTest();
@@ -142,20 +155,23 @@
88 std::map<uint,uint> boundarylayer_model;
89
90};
+
91
92#endif
-
BLConductanceModel
Boundary-layer conductance model class.
Definition: BoundaryLayerConductanceModel.h:23
-
BLConductanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: BoundaryLayerConductanceModel.cpp:90
-
BLConductanceModel::setBoundaryLayerModel
void setBoundaryLayerModel(const char *gH_model)
Set the boundary-layer conductance model to be used for all primitives in the Context.
Definition: BoundaryLayerConductanceModel.cpp:94
- -
BLConductanceModel::run
void run()
Run boundary-layer conductance calculations for all primitives in the Context.
Definition: BoundaryLayerConductanceModel.cpp:127
-
BLConductanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition: BoundaryLayerConductanceModel.cpp:86
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
+
BLConductanceModel
Boundary-layer conductance model class.
Definition BoundaryLayerConductanceModel.h:23
+
BLConductanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition BoundaryLayerConductanceModel.cpp:90
+
BLConductanceModel::setBoundaryLayerModel
void setBoundaryLayerModel(const char *gH_model)
Set the boundary-layer conductance model to be used for all primitives in the Context.
Definition BoundaryLayerConductanceModel.cpp:94
+ +
BLConductanceModel::run
void run()
Run boundary-layer conductance calculations for all primitives in the Context.
Definition BoundaryLayerConductanceModel.cpp:127
+
BLConductanceModel::BLConductanceModel
BLConductanceModel(helios::Context *context)
Constructor.
Definition BoundaryLayerConductanceModel.cpp:20
+
BLConductanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition BoundaryLayerConductanceModel.cpp:86
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_c_lion_i_d_e.html b/doc/html/_c_lion_i_d_e.html index 19220f98b..3f31fd3e4 100644 --- a/doc/html/_c_lion_i_d_e.html +++ b/doc/html/_c_lion_i_d_e.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Using the CLion IDE with Helios
+
Using the CLion IDE with Helios

Using an Interactive Development Environment (IDE) can help to speed up code development, particularly in Helios. One excellent and recommended C++ IDE is CLion by JetBrains, and is available on PC, Mac, and Linux. Students and academics can get a free license for CLion the entire JetBrains suite. Visit here to get the free license.

@@ -114,7 +126,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_camera_calibration_8cpp.html b/doc/html/_camera_calibration_8cpp.html index cdf2b0489..cd080e137 100644 --- a/doc/html/_camera_calibration_8cpp.html +++ b/doc/html/_camera_calibration_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Functions
@@ -100,7 +112,7 @@ - +

Functions

void undistortImage (std::vector< std::vector< unsigned char > > &image, std::vector< std::vector< unsigned char > > &undistorted, std::vector< std::vector< double > > &K, std::vector< double > &distCoeffs)
void undistortImage (std::vector< std::vector< unsigned char > > &image, std::vector< std::vector< unsigned char > > &undistorted, std::vector< std::vector< double > > &K, std::vector< double > &distCoeffs)
 

Detailed Description

@@ -120,31 +132,22 @@

void undistortImage ( - std::vector< std::vector< unsigned char > > &  - image, + std::vector< std::vector< unsigned char > > & image, - std::vector< std::vector< unsigned char > > &  - undistorted, + std::vector< std::vector< unsigned char > > & undistorted, - std::vector< std::vector< double > > &  - K, + std::vector< std::vector< double > > & K, - std::vector< double > &  - distCoeffs  - - - - ) - + std::vector< double > & distCoeffs )

@@ -156,7 +159,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_camera_calibration_8cpp_source.html b/doc/html/_camera_calibration_8cpp_source.html index 1b487eda9..fb1cd01d5 100644 --- a/doc/html/_camera_calibration_8cpp_source.html +++ b/doc/html/_camera_calibration_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
CameraCalibration.cpp
@@ -100,6 +112,7 @@
20CameraCalibration::CameraCalibration(helios::Context *context):context(context){
21}
22
+
23std::vector<uint> CameraCalibration::addCheckerboard(const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation,
24 const helios::vec3 &rotationrad, bool firstblack) {
25 helios::vec2 patchfullsize = make_vec2(patchsize,patchsize); //size of each patch
@@ -153,7 +166,9 @@
73 context->translatePrimitive(UUIDs,centrelocation);
74 return UUIDs;
75}
+
76
+
77std::vector<uint> CameraCalibration::addDefaultCheckerboard(const helios::vec3 &centrelocation, const helios::vec3 &rotationrad){
78 helios::int2 boardsidesize = make_int2(10,7);
79 float patchsize = 0.029;
@@ -162,7 +177,9 @@
82 return UUID_checkboard;
83
84}
+
85
+
86std::vector<uint> CameraCalibration::addColorboard(const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector<std::vector<helios::RGBcolor>> &colorassignment, const std::vector<std::vector<std::string>> &spectrumassignment) {
87
88 uint Nrow;
@@ -215,6 +232,7 @@
135 return UUIDs;
136
137}
+
138
139//void CameraCalibration::setColorboardReflectivity(const uint &UUID, const std::string &filename, const std::string &labelname) {
140// //\todo this needs to be updated
@@ -229,6 +247,7 @@
149//}
150
151// Add default color board (DKC-RPO) with spectral reflectivity values
+
152std::vector<uint> CameraCalibration::addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad) {
153
154 if (!UUIDs_colorboard.empty()){
@@ -242,11 +261,13 @@
162
163 return UUIDs;
164}
+
165
166std::vector<uint> CameraCalibration::getColorBoardUUIDs(){
167 return UUIDs_colorboard;
168}
169
+
170bool CameraCalibration::writeSpectralXMLfile(const std::string &filename, const std::string &note, const std::string &label, std::vector<vec2> *spectrum){
171
172 std::ofstream newspectraldata(filename);
@@ -280,8 +301,10 @@
200
201 }
202}
+
203
204// Load XML file and save data in spectral vectors containing both wavelengths and spectral values
+
205bool CameraCalibration::loadXMLlabeldata(const std::string &filename,const std::string &labelname,std::vector<vec2> &spectraldata){
206
207 Context context_temporary;
@@ -296,7 +319,9 @@
216 return false;
217 }
218}
+
219
+
220float CameraCalibration::GradientDescent(std::vector<std::vector<float>> *expandedcameraspectra, const std::vector<std::vector<float>> &expandedconstinput,
221 const float &learningrate, const std::vector<std::vector<float>> &truevalues) {
222
@@ -317,7 +342,7 @@
237 errors.at(iboardn)=truevalues.at(iband).at(iboardn)-output.at(iboardn);
238
239 //Calculate root mean square error as loss function
-
240 iloss += (errors.at(iboardn) * errors.at(iboardn)) / float(boardnumber)/float(bandnumber);
+
240 iloss += (errors.at(iboardn) * errors.at(iboardn)) / float(boardnumber)/float(bandnumber);
241 }
242
243 //Update extended spectrum
@@ -336,6 +361,7 @@
256 }
257 return iloss;
258}
+
259
260std::vector<float> CameraCalibration::expandSpectrum(const std::vector<helios::vec2>& targetspectrum, float normvalue=1) {
261
@@ -371,6 +397,7 @@
291}
292
293
+
294std::vector<float> CameraCalibration::updateCameraResponseSpectra(const std::vector<std::string>& camerareponselabels, const std::string &label,
295 const std::map<uint, std::vector<vec2>> &simulatedinputspectra,
296 const std::vector<std::vector<float>> &truevalues) {
@@ -442,7 +469,9 @@
362 loss.push_back(iloss);
363 return loss;
364}
+
365
+
366void CameraCalibration::writeCalibratedCameraResponses(const std::vector<std::string>& camerareponselabels, const std::string &calibratemark, float scale){
367 // write the calibrated camera response spectra in xml files and set them as global data
368
@@ -456,7 +485,9 @@
376 CameraCalibration::writeSpectralXMLfile(calibratedlabel + ".xml", "", calibratedlabel, &cameraresponsespectrum);
377 }
378}
+
379
+
380void CameraCalibration::distortImage(const std::string& cameralabel, const std::vector<std::string>& bandlabels,
381 const helios::vec2 &focalxy, std::vector<double> &distCoeffs, helios::int2 cameraresolution) {
382
@@ -510,6 +541,7 @@
430 }
431
432}
+
433
434void undistortImage(std::vector<std::vector<unsigned char>> &image,
435 std::vector<std::vector<unsigned char>> &undistorted,
@@ -553,6 +585,7 @@
473 }
474}
475
+
476void CameraCalibration::preprocessSpectra(const std::vector<std::string>& sourcelabels, const std::vector<std::string>& cameralabels,
477 std::vector<std::string>& objectlabels, vec2 &wavelengthrange, const std::string& targetlabel){
478
@@ -675,7 +708,9 @@
595 }
596
597}
+
598
+
599float CameraCalibration::getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector<std::string> &bandlabels,
600 const std::vector<std::vector<float>> &truevalues) {
601
@@ -715,7 +750,9 @@
635 float fluxscale = dotsimreal / dotsimsim;
636 return fluxscale;
637}
+
638
+
639std::vector<uint> CameraCalibration::readROMCCanopy(){
640 std::ifstream inputFile("plugins/radiation/spectral_data/external_data/HET01_UNI_scene.def");
641 std::vector<uint> iCUUIDs;
@@ -748,59 +785,61 @@
668 inputFile.close();
669 return iCUUIDs;
670}
+
671
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition: Context_data.cpp:4533
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition: Context_data.cpp:3844
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::interp1
float interp1(const std::vector< helios::vec2 > &points, float x)
Function to perform linear interpolation based on a vector of discrete (x,y) values.
Definition: global.cpp:3022
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::nullrotation
SphericalCoord nullrotation
Default null SphericalCoord that applies no rotation.
Definition: global.cpp:57
-
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition: global.cpp:1069
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
CameraCalibration::loadXMLlabeldata
bool loadXMLlabeldata(const std::string &filename, const std::string &labelname, std::vector< helios::vec2 > &spectraldata)
Load XML file and save data in spectral vectors containing both wavelengths and spectral values.
Definition: CameraCalibration.cpp:205
-
CameraCalibration::writeCalibratedCameraResponses
void writeCalibratedCameraResponses(const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
Write calibrated camera response spectra.
Definition: CameraCalibration.cpp:366
-
CameraCalibration::getCameraResponseScale
float getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
Get camera spectral response scale.
Definition: CameraCalibration.cpp:599
-
CameraCalibration::addDefaultColorboard
std::vector< uint > addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
Set reflectivity for a specific UUID.
Definition: CameraCalibration.cpp:152
-
CameraCalibration::GradientDescent
float GradientDescent(std::vector< std::vector< float > > *expandedcameraspectra, const std::vector< std::vector< float > > &expandedconstinput, const float &learningrate, const std::vector< std::vector< float > > &truevalues)
Reduce calibration error based on gradient descent.
Definition: CameraCalibration.cpp:220
-
CameraCalibration::addDefaultCheckerboard
std::vector< uint > addDefaultCheckerboard(const helios::vec3 &centrelocation, const helios::vec3 &rotationrad)
Add default checker board geometry into context.
Definition: CameraCalibration.cpp:77
-
CameraCalibration::distortImage
void distortImage(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const helios::vec2 &focalxy, std::vector< double > &distCoeffs, helios::int2 camerareoslution)
Get distorted image.
Definition: CameraCalibration.cpp:380
-
CameraCalibration::preprocessSpectra
void preprocessSpectra(const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
Preprocess all spectra for modelling.
Definition: CameraCalibration.cpp:476
-
CameraCalibration::updateCameraResponseSpectra
std::vector< float > updateCameraResponseSpectra(const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
Update camera response spectra.
Definition: CameraCalibration.cpp:294
-
CameraCalibration::writeSpectralXMLfile
bool writeSpectralXMLfile(const std::string &filename, const std::string &note, const std::string &label, std::vector< helios::vec2 > *spectrum)
Write XML file from spectral vectors containing both wavelengths and spectral values.
Definition: CameraCalibration.cpp:170
-
CameraCalibration::addCheckerboard
std::vector< uint > addCheckerboard(const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation, const helios::vec3 &rotationrad, bool firstblack=true)
Add checker board geometry into context.
Definition: CameraCalibration.cpp:23
-
CameraCalibration::addColorboard
std::vector< uint > addColorboard(const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector< std::vector< helios::RGBcolor > > &colorassignment={}, const std::vector< std::vector< std::string > > &spectrumassignment={})
Add color board geometry into context.
Definition: CameraCalibration.cpp:86
-
CameraCalibration::readROMCCanopy
std::vector< uint > readROMCCanopy()
Read ROMC canopy file (Used for self test).
Definition: CameraCalibration.cpp:639
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition Context_data.cpp:4533
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition Context_data.cpp:3844
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::interp1
float interp1(const std::vector< helios::vec2 > &points, float x)
Function to perform linear interpolation based on a vector of discrete (x,y) values.
Definition global.cpp:3022
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::nullrotation
SphericalCoord nullrotation
Default null SphericalCoord that applies no rotation.
Definition global.cpp:57
+
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition global.cpp:1069
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
CameraCalibration::loadXMLlabeldata
bool loadXMLlabeldata(const std::string &filename, const std::string &labelname, std::vector< helios::vec2 > &spectraldata)
Load XML file and save data in spectral vectors containing both wavelengths and spectral values.
Definition CameraCalibration.cpp:205
+
CameraCalibration::writeCalibratedCameraResponses
void writeCalibratedCameraResponses(const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
Write calibrated camera response spectra.
Definition CameraCalibration.cpp:366
+
CameraCalibration::getCameraResponseScale
float getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
Get camera spectral response scale.
Definition CameraCalibration.cpp:599
+
CameraCalibration::addDefaultColorboard
std::vector< uint > addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
Set reflectivity for a specific UUID.
Definition CameraCalibration.cpp:152
+
CameraCalibration::GradientDescent
float GradientDescent(std::vector< std::vector< float > > *expandedcameraspectra, const std::vector< std::vector< float > > &expandedconstinput, const float &learningrate, const std::vector< std::vector< float > > &truevalues)
Reduce calibration error based on gradient descent.
Definition CameraCalibration.cpp:220
+
CameraCalibration::addDefaultCheckerboard
std::vector< uint > addDefaultCheckerboard(const helios::vec3 &centrelocation, const helios::vec3 &rotationrad)
Add default checker board geometry into context.
Definition CameraCalibration.cpp:77
+
CameraCalibration::distortImage
void distortImage(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const helios::vec2 &focalxy, std::vector< double > &distCoeffs, helios::int2 camerareoslution)
Get distorted image.
Definition CameraCalibration.cpp:380
+
CameraCalibration::preprocessSpectra
void preprocessSpectra(const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
Preprocess all spectra for modelling.
Definition CameraCalibration.cpp:476
+
CameraCalibration::updateCameraResponseSpectra
std::vector< float > updateCameraResponseSpectra(const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
Update camera response spectra.
Definition CameraCalibration.cpp:294
+
CameraCalibration::writeSpectralXMLfile
bool writeSpectralXMLfile(const std::string &filename, const std::string &note, const std::string &label, std::vector< helios::vec2 > *spectrum)
Write XML file from spectral vectors containing both wavelengths and spectral values.
Definition CameraCalibration.cpp:170
+
CameraCalibration::addCheckerboard
std::vector< uint > addCheckerboard(const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation, const helios::vec3 &rotationrad, bool firstblack=true)
Add checker board geometry into context.
Definition CameraCalibration.cpp:23
+
CameraCalibration::addColorboard
std::vector< uint > addColorboard(const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector< std::vector< helios::RGBcolor > > &colorassignment={}, const std::vector< std::vector< std::string > > &spectrumassignment={})
Add color board geometry into context.
Definition CameraCalibration.cpp:86
+
CameraCalibration::readROMCCanopy
std::vector< uint > readROMCCanopy()
Read ROMC canopy file (Used for self test).
Definition CameraCalibration.cpp:639
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_camera_calibration_8h.html b/doc/html/_camera_calibration_8h.html index 939f79fa6..8349978dc 100644 --- a/doc/html/_camera_calibration_8h.html +++ b/doc/html/_camera_calibration_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -117,7 +129,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_camera_calibration_8h_source.html b/doc/html/_camera_calibration_8h_source.html index d3587279c..a9575ed5e 100644 --- a/doc/html/_camera_calibration_8h_source.html +++ b/doc/html/_camera_calibration_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
CameraCalibration.h
@@ -97,6 +109,7 @@
17#define HELIOS_CAMERACALIBRATION_H
18#include "Context.h"
19
+
21struct CameraCalibration{
22 explicit CameraCalibration(helios::Context *context);
23
@@ -135,6 +148,7 @@
112 const std::map<uint,std::vector<helios::vec2>>& simulatedinputspectra,
113 const std::vector<std::vector<float>> &truevalues);
114
+
116 struct GradientDescentParameters
117 {
118 float learningrate=0.000001;
@@ -143,6 +157,7 @@
121 std::vector<float> camerarescales = {1,1,1};
122 GradientDescentParameters() = default;
123 };
+
124
125 GradientDescentParameters responseupdateparameters;
126
@@ -213,34 +228,36 @@
228 {"ColorReference_13", "ColorReference_14", "ColorReference_15", "ColorReference_16", "ColorReference_17", "ColorReference_18"}};
229
230};
+
231
232#endif //HELIOS_CAMERACALIBRATION_H
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
CameraCalibration::GradientDescentParameters
Parameter struct for gradient descent.
Definition: CameraCalibration.h:117
-
CameraCalibration
Camera calibration structure used for camera calibration tasks.
Definition: CameraCalibration.h:21
-
CameraCalibration::loadXMLlabeldata
bool loadXMLlabeldata(const std::string &filename, const std::string &labelname, std::vector< helios::vec2 > &spectraldata)
Load XML file and save data in spectral vectors containing both wavelengths and spectral values.
Definition: CameraCalibration.cpp:205
-
CameraCalibration::writeCalibratedCameraResponses
void writeCalibratedCameraResponses(const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
Write calibrated camera response spectra.
Definition: CameraCalibration.cpp:366
-
CameraCalibration::getCameraResponseScale
float getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
Get camera spectral response scale.
Definition: CameraCalibration.cpp:599
-
CameraCalibration::addDefaultColorboard
std::vector< uint > addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
Set reflectivity for a specific UUID.
Definition: CameraCalibration.cpp:152
-
CameraCalibration::GradientDescent
float GradientDescent(std::vector< std::vector< float > > *expandedcameraspectra, const std::vector< std::vector< float > > &expandedconstinput, const float &learningrate, const std::vector< std::vector< float > > &truevalues)
Reduce calibration error based on gradient descent.
Definition: CameraCalibration.cpp:220
-
CameraCalibration::addDefaultCheckerboard
std::vector< uint > addDefaultCheckerboard(const helios::vec3 &centrelocation, const helios::vec3 &rotationrad)
Add default checker board geometry into context.
Definition: CameraCalibration.cpp:77
-
CameraCalibration::distortImage
void distortImage(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const helios::vec2 &focalxy, std::vector< double > &distCoeffs, helios::int2 camerareoslution)
Get distorted image.
Definition: CameraCalibration.cpp:380
-
CameraCalibration::preprocessSpectra
void preprocessSpectra(const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
Preprocess all spectra for modelling.
Definition: CameraCalibration.cpp:476
-
CameraCalibration::updateCameraResponseSpectra
std::vector< float > updateCameraResponseSpectra(const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
Update camera response spectra.
Definition: CameraCalibration.cpp:294
-
CameraCalibration::writeSpectralXMLfile
bool writeSpectralXMLfile(const std::string &filename, const std::string &note, const std::string &label, std::vector< helios::vec2 > *spectrum)
Write XML file from spectral vectors containing both wavelengths and spectral values.
Definition: CameraCalibration.cpp:170
-
CameraCalibration::addCheckerboard
std::vector< uint > addCheckerboard(const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation, const helios::vec3 &rotationrad, bool firstblack=true)
Add checker board geometry into context.
Definition: CameraCalibration.cpp:23
-
CameraCalibration::addColorboard
std::vector< uint > addColorboard(const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector< std::vector< helios::RGBcolor > > &colorassignment={}, const std::vector< std::vector< std::string > > &spectrumassignment={})
Add color board geometry into context.
Definition: CameraCalibration.cpp:86
-
CameraCalibration::readROMCCanopy
std::vector< uint > readROMCCanopy()
Read ROMC canopy file (Used for self test).
Definition: CameraCalibration.cpp:639
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
CameraCalibration::GradientDescentParameters
Parameter struct for gradient descent.
Definition CameraCalibration.h:117
+
CameraCalibration
Camera calibration structure used for camera calibration tasks.
Definition CameraCalibration.h:21
+
CameraCalibration::loadXMLlabeldata
bool loadXMLlabeldata(const std::string &filename, const std::string &labelname, std::vector< helios::vec2 > &spectraldata)
Load XML file and save data in spectral vectors containing both wavelengths and spectral values.
Definition CameraCalibration.cpp:205
+
CameraCalibration::writeCalibratedCameraResponses
void writeCalibratedCameraResponses(const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
Write calibrated camera response spectra.
Definition CameraCalibration.cpp:366
+
CameraCalibration::getCameraResponseScale
float getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
Get camera spectral response scale.
Definition CameraCalibration.cpp:599
+
CameraCalibration::addDefaultColorboard
std::vector< uint > addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
Set reflectivity for a specific UUID.
Definition CameraCalibration.cpp:152
+
CameraCalibration::GradientDescent
float GradientDescent(std::vector< std::vector< float > > *expandedcameraspectra, const std::vector< std::vector< float > > &expandedconstinput, const float &learningrate, const std::vector< std::vector< float > > &truevalues)
Reduce calibration error based on gradient descent.
Definition CameraCalibration.cpp:220
+
CameraCalibration::addDefaultCheckerboard
std::vector< uint > addDefaultCheckerboard(const helios::vec3 &centrelocation, const helios::vec3 &rotationrad)
Add default checker board geometry into context.
Definition CameraCalibration.cpp:77
+
CameraCalibration::distortImage
void distortImage(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const helios::vec2 &focalxy, std::vector< double > &distCoeffs, helios::int2 camerareoslution)
Get distorted image.
Definition CameraCalibration.cpp:380
+
CameraCalibration::preprocessSpectra
void preprocessSpectra(const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
Preprocess all spectra for modelling.
Definition CameraCalibration.cpp:476
+
CameraCalibration::updateCameraResponseSpectra
std::vector< float > updateCameraResponseSpectra(const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
Update camera response spectra.
Definition CameraCalibration.cpp:294
+
CameraCalibration::writeSpectralXMLfile
bool writeSpectralXMLfile(const std::string &filename, const std::string &note, const std::string &label, std::vector< helios::vec2 > *spectrum)
Write XML file from spectral vectors containing both wavelengths and spectral values.
Definition CameraCalibration.cpp:170
+
CameraCalibration::addCheckerboard
std::vector< uint > addCheckerboard(const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation, const helios::vec3 &rotationrad, bool firstblack=true)
Add checker board geometry into context.
Definition CameraCalibration.cpp:23
+
CameraCalibration::addColorboard
std::vector< uint > addColorboard(const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector< std::vector< helios::RGBcolor > > &colorassignment={}, const std::vector< std::vector< std::string > > &spectrumassignment={})
Add color board geometry into context.
Definition CameraCalibration.cpp:86
+
CameraCalibration::readROMCCanopy
std::vector< uint > readROMCCanopy()
Read ROMC canopy file (Used for self test).
Definition CameraCalibration.cpp:639
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_canopy_generator_8cpp.html b/doc/html/_canopy_generator_8cpp.html index ef459f853..0e579dfc1 100644 --- a/doc/html/_canopy_generator_8cpp.html +++ b/doc/html/_canopy_generator_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Functions
@@ -101,22 +113,22 @@ - + - + - + - + - + - +

Functions

float getVariation (float V, std::minstd_rand0 &generator, bool positive)
float getVariation (float V, std::minstd_rand0 &generator, bool positive)
 Draw a random number (float) from a uniform distribution between -V and V.
 
int getVariation (int V, std::minstd_rand0 &generator, bool positive)
int getVariation (int V, std::minstd_rand0 &generator, bool positive)
 Draw a random number (int) from a uniform distribution between -V and V.
 
uint getVariation (uint V, std::minstd_rand0 &generator)
uint getVariation (uint V, std::minstd_rand0 &generator)
 Draw a random number (uint) from a uniform distribution between 0 and V.
 
helios::vec3 interpolateTube (const std::vector< vec3 > &P, float frac)
helios::vec3 interpolateTube (const std::vector< vec3 > &P, float frac)
 Interpolate the position of a point along a tube.
 
float interpolateTube (const std::vector< float > &P, float frac)
float interpolateTube (const std::vector< float > &P, float frac)
 Interpolate the radius of a point along a tube.
 
float evaluateCDFresid (float thetaL, std::vector< float > &ru_v, const void *a_distribution)
float evaluateCDFresid (float thetaL, std::vector< float > &ru_v, const void *a_distribution)
 Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf angle.
 
@@ -137,25 +149,17 @@

float evaluateCDFresid ( - float  - thetaL, + float thetaL, - std::vector< float > &  - ru_v, + std::vector< float > & ru_v, - const void *  - a_distribution  - - - - ) - + const void * a_distribution )

@@ -183,25 +187,17 @@

float getVariation ( - float  - V, + float V, - std::minstd_rand0 &  - generator, + std::minstd_rand0 & generator, - bool  - positive = false  - - - - ) - + bool positive = false )

@@ -229,25 +225,17 @@

int getVariation ( - int  - V, + int V, - std::minstd_rand0 &  - generator, + std::minstd_rand0 & generator, - bool  - positive = false  - - - - ) - + bool positive = false )

@@ -275,19 +263,12 @@

uint getVariation ( - uint  - V, + uint V, - std::minstd_rand0 &  - generator  - - - - ) - + std::minstd_rand0 & generator )

@@ -314,19 +295,12 @@

float interpolateTube ( - const std::vector< float > &  - P, + const std::vector< float > & P, - float  - frac  - - - - ) - + float frac )

@@ -353,19 +327,12 @@

helios::vec3 interpolateTube ( - const std::vector< helios::vec3 > &  - P, + const std::vector< helios::vec3 > & P, - float  - frac  - - - - ) - + float frac )

@@ -386,7 +353,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_canopy_generator_8cpp_source.html b/doc/html/_canopy_generator_8cpp_source.html index 90e3c80a1..f2169e956 100644 --- a/doc/html/_canopy_generator_8cpp_source.html +++ b/doc/html/_canopy_generator_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
CanopyGenerator.cpp
@@ -102,15 +114,20 @@
24static int nullvalue_i = 99999;
26static std::string nullvalue_s = "99999";
27
+
32
+
33BaseCanopyParameters::BaseCanopyParameters(const pugi::xml_node canopy_node) : BaseCanopyParameters(){
34 readParametersFromXML(canopy_node);
35}
+
36
+
37void BaseCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
38 // ----- canopy origin ------ //
39 vec3 new_canopy_origin = XMLloadvec3(canopy_node, "canopy_origin");
@@ -124,7 +141,9 @@
47 canopy_rotation = new_canopy_rotation;
48 }
49}
+
50
+
51HomogeneousCanopyParameters::HomogeneousCanopyParameters() : BaseCanopyParameters(){
52
53 leaf_size = make_vec2(0.1,0.1);
@@ -144,11 +163,15 @@
67 buffer = "z";
68
69}
+
70
+
74
+
75void HomogeneousCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
76 BaseCanopyParameters::readParametersFromXML(canopy_node);
77
@@ -200,15 +223,21 @@
123 buffer = new_buffer;
124 }
125}
+
126
+
127void HomogeneousCanopyParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
128 std::cout << "HomogeneousCanopyParameters::buildPlant: Cannot build a single plant of canopy type HomogeneousCanopyParameters" << std::endl;
129}
+
130
+
131void HomogeneousCanopyParameters::buildCanopy(CanopyGenerator& canopy_generator){
132 canopy_generator.buildCanopy(*this);
133}
+
134
+
156
+
160
+
161void SphericalCrownsCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
162 BaseCanopyParameters::readParametersFromXML(canopy_node);
163
@@ -298,15 +331,21 @@
221 plant_count = new_plant_count;
222 }
223}
+
224
+
225void SphericalCrownsCanopyParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
226 std::cout << "SphericalCrownsCanopyParameters::buildPlant: Cannot build a single plant of canopy type SphericalCrownsCanopyParameters" << std::endl;
227}
+
228
+
229void SphericalCrownsCanopyParameters::buildCanopy(CanopyGenerator& canopy_generator){
230 canopy_generator.buildCanopy(*this);
231}
+
232
+
256
+
260
+
261void ConicalCrownsCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
262 BaseCanopyParameters::readParametersFromXML(canopy_node);
263
@@ -404,15 +447,21 @@
327 plant_count = new_plant_count;
328 }
329}
+
330
+
331void ConicalCrownsCanopyParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
332 std::cout << "ConicalCrownsCanopyParameters::buildPlant: Cannot build a single plant of canopy type ConicalCrownsCanopyParameters" << std::endl;
333}
+
334
+
335void ConicalCrownsCanopyParameters::buildCanopy(CanopyGenerator& canopy_generator){
336 canopy_generator.buildCanopy(*this);
337}
+
338
+
339BaseGrapeVineParameters::BaseGrapeVineParameters() : BaseCanopyParameters(){
340
341 leaf_texture_file = "plugins/canopygenerator/textures/GrapeLeaf.png";
@@ -461,11 +510,15 @@
384 missing_plant_probability = 0;
385
386}
+
387
+
388BaseGrapeVineParameters::BaseGrapeVineParameters(const pugi::xml_node canopy_node) : BaseGrapeVineParameters(){
389 readParametersFromXML(canopy_node);
390}
+
391
+
392void BaseGrapeVineParameters::readParametersFromXML(const pugi::xml_node canopy_node){
393 BaseCanopyParameters::readParametersFromXML(canopy_node);
394
@@ -685,15 +738,21 @@
608 canopy_rotation_spread = new_canopy_rotation_spread;
609 }
610}
+
611
+
612void BaseGrapeVineParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
613 std::cout << "BaseGrapeVineParameters::buildPlant: Cannot build a single plant of canopy type BaseGrapeVineParameters" << std::endl;
614}
+
615
+
616void BaseGrapeVineParameters::buildCanopy(CanopyGenerator& canopy_generator){
617 std::cout << "BaseGrapeVineParameters::buildPlant: Cannot build a canopy of type BaseGrapeVineParameters" << std::endl;
618}
+
619
+
620VSPGrapevineParameters::VSPGrapevineParameters() : BaseGrapeVineParameters(){
621
622 trunk_height = 0.7;
@@ -727,23 +786,33 @@
650 row_spacing = 2;
651
652}
+
653
+
654VSPGrapevineParameters::VSPGrapevineParameters(const pugi::xml_node canopy_node) : VSPGrapevineParameters(){
655 readParametersFromXML(canopy_node);
656}
+
657
+
658void VSPGrapevineParameters::readParametersFromXML(const pugi::xml_node canopy_node){
659 BaseGrapeVineParameters::readParametersFromXML(canopy_node);
660}
+
661
+
662void VSPGrapevineParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
663 canopy_generator.grapevineVSP(*this, origin);
664}
+
665
+
666void VSPGrapevineParameters::buildCanopy(CanopyGenerator& canopy_generator){
667 canopy_generator.buildCanopy(*this);
668}
+
669
+
670SplitGrapevineParameters::SplitGrapevineParameters() : BaseGrapeVineParameters(){
671
672 trunk_height = 1.3;
@@ -786,11 +855,15 @@
709 row_spacing = 4;
710
711}
+
712
+
713SplitGrapevineParameters::SplitGrapevineParameters(const pugi::xml_node canopy_node) : SplitGrapevineParameters(){
714 readParametersFromXML(canopy_node);
715}
+
716
+
717void SplitGrapevineParameters::readParametersFromXML(const pugi::xml_node canopy_node){
718 BaseGrapeVineParameters::readParametersFromXML(canopy_node);
719
@@ -809,15 +882,21 @@
732 shoot_angle_base = sab;
733 }
734}
+
735
+
736void SplitGrapevineParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
737 canopy_generator.grapevineSplit(*this, origin);
738}
+
739
+
740void SplitGrapevineParameters::buildCanopy(CanopyGenerator& canopy_generator){
741 canopy_generator.buildCanopy(*this);
742}
+
743
+
777
+
781
+
785
+
786void UnilateralGrapevineParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
787 canopy_generator.grapevineUnilateral(*this, origin);
788}
+
789
+
790void UnilateralGrapevineParameters::buildCanopy(CanopyGenerator& canopy_generator){
791 canopy_generator.buildCanopy(*this);
792}
+
793
+
825
+
829
+
830void GobletGrapevineParameters::readParametersFromXML(const pugi::xml_node canopy_node){
831 BaseGrapeVineParameters::readParametersFromXML(canopy_node);
832}
+
833
+
834void GobletGrapevineParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
835 canopy_generator.grapevineGoblet(*this, origin);
836}
+
837
+
838void GobletGrapevineParameters::buildCanopy(CanopyGenerator& canopy_generator){
839 canopy_generator.buildCanopy(*this);
840}
+
841
+
842WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters() : BaseCanopyParameters(){
843
844 needle_width = 0.0005;
@@ -953,11 +1052,15 @@
876 plant_count = make_int2(3,3);
877
878}
+
879
+
883
+
884void WhiteSpruceCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
885 BaseCanopyParameters::readParametersFromXML(canopy_node);
886
@@ -1041,15 +1144,21 @@
964 plant_count = new_plant_count;
965 }
966}
+
967
+
968void WhiteSpruceCanopyParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
969 canopy_generator.whitespruce(*this, origin);
970}
+
971
+
972void WhiteSpruceCanopyParameters::buildCanopy(CanopyGenerator& canopy_generator){
973 canopy_generator.buildCanopy(*this);
974}
+
975
+
976TomatoParameters::TomatoParameters() : BaseCanopyParameters(){
977
978 leaf_length = 0.2;
@@ -1077,11 +1186,15 @@
1000 plant_count = make_int2(3,3);
1001
1002}
+
1003
+
1004TomatoParameters::TomatoParameters(const pugi::xml_node canopy_node) : TomatoParameters(){
1005 readParametersFromXML(canopy_node);
1006}
+
1007
+
1008void TomatoParameters::readParametersFromXML(const pugi::xml_node canopy_node){
1009 BaseCanopyParameters::readParametersFromXML(canopy_node);
1010
@@ -1146,15 +1259,21 @@
1069 plant_count = new_plant_count;
1070 }
1071}
+
1072
+
1073void TomatoParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
1074 canopy_generator.tomato(*this, origin);
1075}
+
1076
+
1077void TomatoParameters::buildCanopy(CanopyGenerator& canopy_generator){
1078 canopy_generator.buildCanopy(*this);
1079}
+
1080
+
1081StrawberryParameters::StrawberryParameters() : BaseCanopyParameters(){
1082
1083 leaf_length = 0.1;
@@ -1188,11 +1307,15 @@
1111 plant_count = make_int2(4,2);
1112
1113}
+
1114
+
1115StrawberryParameters::StrawberryParameters(const pugi::xml_node canopy_node) : StrawberryParameters(){
1116 readParametersFromXML(canopy_node);
1117}
+
1118
+
1119void StrawberryParameters::readParametersFromXML(const pugi::xml_node canopy_node){
1120 BaseCanopyParameters::readParametersFromXML(canopy_node);
1121
@@ -1266,15 +1389,21 @@
1189 plant_count = new_plant_count;
1190 }
1191}
+
1192
+
1193void StrawberryParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
1194 canopy_generator.strawberry(*this, origin);
1195}
+
1196
+
1197void StrawberryParameters::buildCanopy(CanopyGenerator& canopy_generator){
1198 canopy_generator.buildCanopy(*this);
1199}
+
1200
+
1201WalnutCanopyParameters::WalnutCanopyParameters() : BaseCanopyParameters(){
1202
1203 leaf_length = 0.15;
@@ -1306,11 +1435,15 @@
1229 plant_count = make_int2(4,2);
1230
1231}
+
1232
+
1233WalnutCanopyParameters::WalnutCanopyParameters(const pugi::xml_node canopy_node) : WalnutCanopyParameters(){
1234 readParametersFromXML(canopy_node);
1235}
+
1236
+
1237void WalnutCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
1238 BaseCanopyParameters::readParametersFromXML(canopy_node);
1239
@@ -1375,15 +1508,21 @@
1298 plant_count = new_plant_count;
1299 }
1300}
+
1301
+
1302void WalnutCanopyParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
1303 canopy_generator.walnut(*this, origin);
1304}
+
1305
+
1306void WalnutCanopyParameters::buildCanopy(CanopyGenerator& canopy_generator){
1307 canopy_generator.buildCanopy(*this);
1308}
+
1309
+
1310SorghumCanopyParameters::SorghumCanopyParameters() : BaseCanopyParameters(){
1311 sorghum_stage = 5;
1312
@@ -1515,11 +1654,15 @@
1438 plant_count = make_int2(10 ,10);
1439
1440}
+
1441
+
1442SorghumCanopyParameters::SorghumCanopyParameters(const pugi::xml_node canopy_node) : SorghumCanopyParameters(){
1443 readParametersFromXML(canopy_node);
1444}
+
1445
+
1446void SorghumCanopyParameters::readParametersFromXML(const pugi::xml_node canopy_node){
1447 BaseCanopyParameters::readParametersFromXML(canopy_node);
1448
@@ -1833,15 +1976,21 @@
1756 plant_count = new_plant_count;
1757 }
1758}
+
1759
+
1760void SorghumCanopyParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
1761 canopy_generator.sorghum(*this, origin);
1762}
+
1763
+
1764void SorghumCanopyParameters::buildCanopy(CanopyGenerator& canopy_generator){
1765 canopy_generator.buildCanopy(*this);
1766}
+
1767
+
1768BeanParameters::BeanParameters() : BaseCanopyParameters() {
1769
1770 leaf_length = 0.075;
@@ -1875,11 +2024,15 @@
1798 germination_probability = 1.f;
1799
1800}
+
1801
+
1802BeanParameters::BeanParameters(const pugi::xml_node canopy_node) : BeanParameters(){
1803 readParametersFromXML(canopy_node);
1804}
+
1805
+
1806void BeanParameters::readParametersFromXML(const pugi::xml_node canopy_node){
1807 BaseCanopyParameters::readParametersFromXML(canopy_node);
1808
@@ -1958,15 +2111,21 @@
1881 germination_probability = new_germination_probability;
1882 }
1883}
+
1884
+
1885void BeanParameters::buildPlant(CanopyGenerator& canopy_generator, helios::vec3 origin){
1886 canopy_generator.bean(*this, origin);
1887}
+
1888
+
1889void BeanParameters::buildCanopy(CanopyGenerator& canopy_generator){
1890 canopy_generator.buildCanopy(*this);
1891}
+
1892
+
1893 CanopyGenerator::CanopyGenerator( helios::Context* m_context ){
1894
1895 context = m_context;
@@ -1980,7 +2139,9 @@
1903 enable_element_labels = false;
1904
1905}
+
1906
+
1907int CanopyGenerator::selfTest(){
1908
1909 std::cout << "Running canopy generator plug-in self-test..." << std::endl;
@@ -2127,12 +2288,15 @@
2050 }
2051
2052}
+
2053
2054template <typename CanopyType, typename... Args>
+
2055void CanopyGenerator::storeCanopyParameters(Args&&... args){
2056 static_assert(std::is_base_of<BaseCanopyParameters, CanopyType>::value, "CanopyType must inherit from BaseCanopyParameters");
2057 canopy_parameters_list.push_back(std::make_shared<CanopyType>(std::forward<Args>(args)...));
2058}
+
2059
2060std::vector<std::shared_ptr<BaseCanopyParameters>> CanopyGenerator::getCanopyParametersList(){
2061 std::vector<std::shared_ptr<BaseCanopyParameters>> params_list;
@@ -2142,6 +2306,7 @@
2065 return params_list;
2066}
2067
+
2068void CanopyGenerator::loadXML( const char* filename, bool build ){
2069
2070 if( printmessages ){
@@ -2184,7 +2349,7 @@
2107 "HomogeneousCanopyParameters")) {
2108
2109 HomogeneousCanopyParameters homogeneouscanopyparameters(s);
-
2110 storeCanopyParameters<HomogeneousCanopyParameters>(homogeneouscanopyparameters);
+
2110 storeCanopyParameters<HomogeneousCanopyParameters>(homogeneouscanopyparameters);
2111 if (build)
2112 buildCanopy(homogeneouscanopyparameters);
2113
@@ -2194,7 +2359,7 @@
2117 for (pugi::xml_node s = cgen.child("SphericalCrownsCanopyParameters"); s; s = s.next_sibling("SphericalCrownsCanopyParameters")) {
2118
2119 SphericalCrownsCanopyParameters sphericalcrownscanopyparameters(s);
-
2120 storeCanopyParameters<SphericalCrownsCanopyParameters>(sphericalcrownscanopyparameters);
+
2120 storeCanopyParameters<SphericalCrownsCanopyParameters>(sphericalcrownscanopyparameters);
2121 if (build)
2122 buildCanopy(sphericalcrownscanopyparameters);
2123
@@ -2204,7 +2369,7 @@
2127 for (pugi::xml_node s = cgen.child("ConicalCrownsCanopyParameters"); s; s = s.next_sibling("ConicalCrownsCanopyParameters")) {
2128
2129 ConicalCrownsCanopyParameters conicalcrownscanopyparameters(s);
-
2130 storeCanopyParameters<ConicalCrownsCanopyParameters>(conicalcrownscanopyparameters);
+
2130 storeCanopyParameters<ConicalCrownsCanopyParameters>(conicalcrownscanopyparameters);
2131 if (build)
2132 buildCanopy(conicalcrownscanopyparameters);
2133
@@ -2215,7 +2380,7 @@
2138 for (pugi::xml_node s = cgen.child("VSPGrapevineParameters"); s; s = s.next_sibling("VSPGrapevineParameters")) {
2139
2140 VSPGrapevineParameters vspgrapevineparameters(s);
-
2141 storeCanopyParameters<VSPGrapevineParameters>(vspgrapevineparameters);
+
2141 storeCanopyParameters<VSPGrapevineParameters>(vspgrapevineparameters);
2142 if (build)
2143 buildCanopy(vspgrapevineparameters);
2144
@@ -2226,7 +2391,7 @@
2149 "SplitGrapevineParameters")) {
2150
2151 SplitGrapevineParameters splitgrapevineparameters(s);
-
2152 storeCanopyParameters<SplitGrapevineParameters>(splitgrapevineparameters);
+
2152 storeCanopyParameters<SplitGrapevineParameters>(splitgrapevineparameters);
2153 if (build)
2154 buildCanopy(splitgrapevineparameters);
2155
@@ -2238,7 +2403,7 @@
2161 "UnilateralGrapevineParameters")) {
2162
2163 UnilateralGrapevineParameters unilateralgrapevineparameters(s);
-
2164 storeCanopyParameters<UnilateralGrapevineParameters>(unilateralgrapevineparameters);
+
2164 storeCanopyParameters<UnilateralGrapevineParameters>(unilateralgrapevineparameters);
2165 if (build)
2166 buildCanopy(unilateralgrapevineparameters);
2167
@@ -2250,7 +2415,7 @@
2173 "GobletGrapevineParameters")) {
2174
2175 GobletGrapevineParameters gobletgrapevineparameters(s);
-
2176 storeCanopyParameters<GobletGrapevineParameters>(gobletgrapevineparameters);
+
2176 storeCanopyParameters<GobletGrapevineParameters>(gobletgrapevineparameters);
2177 if (build)
2178 buildCanopy(gobletgrapevineparameters);
2179
@@ -2261,7 +2426,7 @@
2184 for (pugi::xml_node s = cgen.child("WhiteSpruceCanopyParameters"); s; s = s.next_sibling("WhiteSpruceCanopyParameters")) {
2185
2186 WhiteSpruceCanopyParameters whitesprucecanopyparameters(s);
-
2187 storeCanopyParameters<WhiteSpruceCanopyParameters>(whitesprucecanopyparameters);
+
2187 storeCanopyParameters<WhiteSpruceCanopyParameters>(whitesprucecanopyparameters);
2188 if (build)
2189 buildCanopy(whitesprucecanopyparameters);
2190
@@ -2271,7 +2436,7 @@
2194 for (pugi::xml_node s = cgen.child("StrawberryParameters"); s; s = s.next_sibling("StrawberryParameters")) {
2195
2196 StrawberryParameters strawberryparameters(s);
-
2197 storeCanopyParameters<StrawberryParameters>(strawberryparameters);
+
2197 storeCanopyParameters<StrawberryParameters>(strawberryparameters);
2198 if (build)
2199 buildCanopy(strawberryparameters);
2200
@@ -2281,7 +2446,7 @@
2204 for (pugi::xml_node s = cgen.child("TomatoParameters"); s; s = s.next_sibling("TomatoParameters")) {
2205
2206 TomatoParameters tomatoparameters(s);
-
2207 storeCanopyParameters<TomatoParameters>(tomatoparameters);
+
2207 storeCanopyParameters<TomatoParameters>(tomatoparameters);
2208 if (build)
2209 buildCanopy(tomatoparameters);
2210
@@ -2291,7 +2456,7 @@
2214 for (pugi::xml_node s = cgen.child("WalnutCanopyParameters"); s; s = s.next_sibling("WalnutCanopyParameters")) {
2215
2216 WalnutCanopyParameters walnutcanopyparameters(s);
-
2217 storeCanopyParameters<WalnutCanopyParameters>(walnutcanopyparameters);
+
2217 storeCanopyParameters<WalnutCanopyParameters>(walnutcanopyparameters);
2218 if (build)
2219 buildCanopy(walnutcanopyparameters);
2220
@@ -2301,7 +2466,7 @@
2224 for (pugi::xml_node s = cgen.child("SorghumCanopyParameters"); s; s = s.next_sibling("SorghumCanopyParameters")) {
2225
2226 SorghumCanopyParameters sorghumcanopyparameters(s);
-
2227 storeCanopyParameters<SorghumCanopyParameters>(sorghumcanopyparameters);
+
2227 storeCanopyParameters<SorghumCanopyParameters>(sorghumcanopyparameters);
2228 if (build)
2229 buildCanopy(sorghumcanopyparameters);
2230
@@ -2311,7 +2476,7 @@
2234 for (pugi::xml_node s = cgen.child("BeanParameters"); s; s = s.next_sibling("BeanParameters")) {
2235
2236 BeanParameters beanparameters(s);
-
2237 storeCanopyParameters<BeanParameters>(beanparameters);
+
2237 storeCanopyParameters<BeanParameters>(beanparameters);
2238 if (build)
2239 buildCanopy(beanparameters);
2240
@@ -2369,11 +2534,15 @@
2292 std::cout << "done." << std::endl;
2293
2294}
+
2295
+
2296void CanopyGenerator::buildGround(const vec3 &ground_origin, const vec2 &ground_extent, const int2 &texture_subtiles, const int2 &texture_subpatches, const char* ground_texture_file ){
2297 buildGround( ground_origin, ground_extent, texture_subtiles, texture_subpatches, ground_texture_file, 0.f );
2298}
+
2299
+
2300void CanopyGenerator::buildGround(const vec3 &ground_origin, const vec2 &ground_extent, const int2 &texture_subtiles, const int2 &texture_subpatches, const char* ground_texture_file, float ground_rotation ){
2301
2302 if( printmessages ){
@@ -2407,13 +2576,17 @@
2330 }
2331
2332}
+
2333
+
2334void CanopyGenerator::buildCanopies(){
2335 for (const auto& canopy_parameters : canopy_parameters_list) {
2336 canopy_parameters->buildCanopy(*this);
2337 }
2338}
+
2339
+
2340void CanopyGenerator::buildCanopy(const HomogeneousCanopyParameters &params ){
2341
2342 if( printmessages ){
@@ -2486,7 +2659,9 @@
2409 }
2410
2411}
+
2412
+
2413void CanopyGenerator::buildCanopy(const SphericalCrownsCanopyParameters &params ){
2414
2415 if( printmessages ){
@@ -2587,7 +2762,9 @@
2510 }
2511
2512}
+
2513
+
2514void CanopyGenerator::buildCanopy(const ConicalCrownsCanopyParameters &params ){
2515
2516 if( printmessages ){
@@ -2689,7 +2866,9 @@
2612 }
2613
2614}
+
2615
+
2616void CanopyGenerator::buildCanopy(const VSPGrapevineParameters &params ){
2617
2618 if( printmessages ){
@@ -2736,7 +2915,9 @@
2659 }
2660
2661}
+
2662
+
2663void CanopyGenerator::buildCanopy(const SplitGrapevineParameters &params ){
2664
2665 if( printmessages ){
@@ -2778,7 +2959,9 @@
2701 }
2702
2703}
+
2704
+
2705void CanopyGenerator::buildCanopy(const UnilateralGrapevineParameters &params ){
2706
2707 if( printmessages ){
@@ -2820,7 +3003,9 @@
2743 }
2744
2745}
+
2746
+
2747void CanopyGenerator::buildCanopy(const GobletGrapevineParameters &params ){
2748
2749 if( printmessages ){
@@ -2862,7 +3047,9 @@
2785 }
2786
2787}
+
2788
+
2789void CanopyGenerator::buildCanopy(const WhiteSpruceCanopyParameters &params ){
2790
2791 if( printmessages ){
@@ -2912,7 +3099,9 @@
2835 }
2836
2837}
+
2838
+
2839void CanopyGenerator::buildCanopy(const TomatoParameters &params ){
2840
2841 if( printmessages ){
@@ -2943,7 +3132,9 @@
2866 }
2867
2868}
+
2869
+
2870void CanopyGenerator::buildCanopy(const StrawberryParameters &params ){
2871
2872 if( printmessages ){
@@ -2974,7 +3165,9 @@
2897 }
2898
2899}
+
2900
+
2901void CanopyGenerator::buildCanopy(const WalnutCanopyParameters &params ){
2902
2903 if( printmessages ){
@@ -3005,7 +3198,9 @@
2928 }
2929
2930}
+
2931
+
2932void CanopyGenerator::buildCanopy( const SorghumCanopyParameters &params ){
2933
2934 if( printmessages ){
@@ -3036,7 +3231,9 @@
2959 }
2960
2961}
+
2962
+
2963void CanopyGenerator::buildCanopy(const BeanParameters &params ){
2964
2965 if( printmessages ){
@@ -3077,7 +3274,9 @@
3000 }
3001
3002}
+
3003
+
3004float getVariation( float V, std::minstd_rand0& generator, bool positive ){
3005
3006 std::uniform_real_distribution<float> unif_distribution;
@@ -3089,7 +3288,9 @@
3012 }
3013
3014}
+
3015
+
3016int getVariation( int V, std::minstd_rand0& generator, bool positive ){
3017
3018 if ( positive ) {
@@ -3101,7 +3302,9 @@
3024 }
3025
3026}
+
3027
+
3028uint getVariation( uint V, std::minstd_rand0& generator ){
3029
3030 std::uniform_int_distribution<> unif_distribution(0,V);
@@ -3109,6 +3312,7 @@
3032 return static_cast<uint>(unif_distribution(generator));
3033
3034}
+
3035
3036float CanopyGenerator::sampleLeafAngle(const std::vector<float> &leafAngleDist ){
3037
@@ -3180,6 +3384,7 @@
3103 }
3104}
3105
+
3106std::vector<uint> CanopyGenerator::getTrunkUUIDs(uint PlantID ){
3107 if( PlantID>=UUID_trunk.size() ){
3108 throw( std::runtime_error("ERROR (CanopyGenerator::getTrunkUUIDs): Cannot get UUIDs for plant " + std::to_string(PlantID) + " because only " + std::to_string(UUID_trunk.size()) + " plants have been built.") );
@@ -3190,13 +3395,17 @@
3113 return UUID_trunk.at(PlantID);
3114
3115}
+
3116
+
3117std::vector<uint> CanopyGenerator::getTrunkUUIDs(){
3118 std::vector<uint> UUID_flat = flatten( UUID_trunk );
3119 cleanDeletedUUIDs(UUID_flat);
3120 return UUID_flat;
3121}
+
3122
+
3123std::vector<uint> CanopyGenerator::getBranchUUIDs(uint PlantID ){
3124 if( PlantID>=UUID_branch.size() ){
3125 throw(std::runtime_error("ERROR (CanopyGenerator::getBranchUUIDs): Cannot get UUIDs for plant " + std::to_string(PlantID) + " because only " + std::to_string(UUID_branch.size()) + " plants have been built."));
@@ -3207,13 +3416,17 @@
3130 return UUID_branch.at(PlantID);
3131
3132}
+
3133
+
3134std::vector<uint> CanopyGenerator::getBranchUUIDs(){
3135 std::vector<uint> UUID_flat = flatten( UUID_branch );
3136 cleanDeletedUUIDs(UUID_flat);
3137 return UUID_flat;
3138}
+
3139
+
3140std::vector<std::vector<uint> > CanopyGenerator::getLeafUUIDs(uint PlantID ){
3141 if( PlantID>=UUID_leaf.size() ){
3142 throw(std::runtime_error("ERROR (CanopyGenerator::getLeafUUIDs): Cannot get UUIDs for plant " + std::to_string(PlantID) + " because only " + std::to_string(UUID_leaf.size()) + " plants have been built."));
@@ -3223,13 +3436,17 @@
3146
3147 return UUID_leaf.at(PlantID);
3148}
+
3149
+
3150std::vector<uint> CanopyGenerator::getLeafUUIDs(){
3151 std::vector<uint> UUID_flat = flatten( UUID_leaf );
3152 cleanDeletedUUIDs(UUID_flat);
3153 return UUID_flat;
3154}
+
3155
+
3156std::vector<std::vector<std::vector<uint> > > CanopyGenerator::getFruitUUIDs(uint PlantID ){
3157 if( PlantID>=UUID_fruit.size() ){
3158 throw(std::runtime_error("ERROR (CanopyGenerator::getFruitUUIDs): Cannot get UUIDs for plant " + std::to_string(PlantID) + " because only " + std::to_string(UUID_fruit.size()) + " plants have been built."));
@@ -3240,7 +3457,9 @@
3163 return UUID_fruit.at(PlantID);
3164
3165}
+
3166
+
3167std::vector<uint> CanopyGenerator::getFruitUUIDs(){
3168
3169 std::vector<uint> UUIDs_flat, U;
@@ -3253,7 +3472,9 @@
3176 cleanDeletedUUIDs(UUIDs_flat);
3177 return UUIDs_flat;
3178}
+
3179
+
3180std::vector<uint> CanopyGenerator::getGroundUUIDs(){
3181
3182 std::vector<uint> UUID;
@@ -3269,7 +3490,9 @@
3192 return UUID;
3193
3194}
+
3195
+
3196std::vector<uint> CanopyGenerator::getAllUUIDs(uint PlantID ){
3197 std::vector<uint> UUIDs;
3198 if( UUID_trunk.size()>PlantID ){
@@ -3295,36 +3518,50 @@
3218
3219 return UUIDs;
3220}
+
3221
+
3222uint CanopyGenerator::getPlantCount(){
3223 return UUID_leaf.size();
3224}
+
3225
+
3226void CanopyGenerator::seedRandomGenerator(uint seed ){
3227 generator.seed(seed);
3228}
+
3229
+
3230void CanopyGenerator::disableMessages(){
3231 printmessages=false;
3232}
+
3233
+
3234void CanopyGenerator::enableMessages(){
3235 printmessages=true;
3236}
+
3237
+
3238void CanopyGenerator::buildIndividualPlants(helios::vec3 position){
3239 for (const auto& params : canopy_parameters_list) {
3240 params->buildPlant(*this, position);
3241 }
3242}
+
3243
+
3244void CanopyGenerator::buildIndividualPlants(){
3245 for (const auto& params : canopy_parameters_list) {
3246 vec3 position = params->canopy_origin;
3247 params->buildPlant(*this, position);
3248 }
3249}
+
3250
+
3251helios::vec3 interpolateTube(const std::vector<vec3> &P, float frac ){
3252
3253 assert( frac>=0 && frac<=1 );
@@ -3359,7 +3596,9 @@
3282 return P.front();
3283
3284}
+
3285
+
3286float interpolateTube(const std::vector<float> &P, float frac ){
3287
3288 assert( frac>=0 && frac<=1 );
@@ -3394,7 +3633,9 @@
3317 return P.front();
3318
3319}
+
3320
+
3321float evaluateCDFresid(float thetaL, std::vector<float> &ru_v, const void *a_distribution) {
3322
3323 assert(!ru_v.empty());
@@ -3418,6 +3659,7 @@
3341 return CDFresid;
3342
3343}
+
3344
3345float CanopyGenerator::sampleLeafPDF( const char* distribution ){
3346
@@ -3445,391 +3687,396 @@
3368
3369}
3370
+
3371void CanopyGenerator::createElementLabels() {
3372 enable_element_labels = true;
3373}
+
3374
+
3375void CanopyGenerator::disableElementLabels() {
3376 enable_element_labels = false;
3377}
-
evaluateCDFresid
float evaluateCDFresid(float thetaL, std::vector< float > &ru_v, const void *a_distribution)
Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf ...
Definition: CanopyGenerator.cpp:3321
-
interpolateTube
helios::vec3 interpolateTube(const std::vector< vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition: CanopyGenerator.cpp:3251
-
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive)
Draw a random number (float) from a uniform distribution between -V and V.
Definition: CanopyGenerator.cpp:3004
+
+
evaluateCDFresid
float evaluateCDFresid(float thetaL, std::vector< float > &ru_v, const void *a_distribution)
Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf ...
Definition CanopyGenerator.cpp:3321
+
interpolateTube
helios::vec3 interpolateTube(const std::vector< vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition CanopyGenerator.cpp:3251
+
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive)
Draw a random number (float) from a uniform distribution between -V and V.
Definition CanopyGenerator.cpp:3004
-
evaluateCDFresid
float evaluateCDFresid(float thetaL, std::vector< float > &ru_v, const void *a_distribution)
Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf ...
Definition: CanopyGenerator.cpp:3321
-
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
Draw a random number (float) from a uniform distribution between -V and V.
Definition: CanopyGenerator.cpp:3004
- -
CanopyGenerator::whitespruce
uint whitespruce(const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual white spruce tree.
Definition: whitespruce.cpp:6
-
CanopyGenerator::buildCanopy
void buildCanopy(const HomogeneousCanopyParameters &params)
Build a canopy consisting of a homogeneous volume of leaves.
Definition: CanopyGenerator.cpp:2340
-
CanopyGenerator::storeCanopyParameters
void storeCanopyParameters(Args &&... args)
Stores the given canopy parameters.
Definition: CanopyGenerator.cpp:2055
-
CanopyGenerator::sorghum
uint sorghum(const SorghumCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual sorghum plant.
Definition: sorghum.cpp:8
-
CanopyGenerator::getLeafUUIDs
std::vector< std::vector< uint > > getLeafUUIDs(uint PlantID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the plant leaves.
Definition: CanopyGenerator.cpp:3140
-
CanopyGenerator::enableMessages
void enableMessages()
Enable standard messages to be printed to screen (default is to enable messages)
Definition: CanopyGenerator.cpp:3234
-
CanopyGenerator::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs()
Get the unique universal identifiers (UUIDs) for all trunk primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3117
-
CanopyGenerator::tomato
uint tomato(const TomatoParameters &params, const helios::vec3 &origin)
Function to add an individual tomato plant.
Definition: tomato.cpp:139
-
CanopyGenerator::buildGround
void buildGround(const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file)
Build a ground consisting of texture sub-tiles and sub-patches, which can be different sizes.
Definition: CanopyGenerator.cpp:2296
-
CanopyGenerator::strawberry
uint strawberry(const StrawberryParameters &params, const helios::vec3 &origin)
Function to add an individual strawberry plant.
Definition: strawberry.cpp:215
-
CanopyGenerator::getGroundUUIDs
std::vector< uint > getGroundUUIDs()
Get the unique universal identifiers (UUIDs) for the primitives that make up the ground.
Definition: CanopyGenerator.cpp:3180
-
CanopyGenerator::getLeafUUIDs
std::vector< uint > getLeafUUIDs()
Get the unique universal identifiers (UUIDs) for all leaf primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3150
-
CanopyGenerator::getBranchUUIDs
std::vector< uint > getBranchUUIDs()
Get the unique universal identifiers (UUIDs) for all branch primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3134
-
CanopyGenerator::buildCanopies
void buildCanopies()
Builds canopies for all the stored canopy parameters.
Definition: CanopyGenerator.cpp:2334
-
CanopyGenerator::grapevineSplit
uint grapevineSplit(const SplitGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a split trellis.
Definition: grapevine.cpp:464
-
CanopyGenerator::getAllUUIDs
std::vector< uint > getAllUUIDs(uint PlantID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition: CanopyGenerator.cpp:3196
-
CanopyGenerator::grapevineGoblet
uint grapevineGoblet(const GobletGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a goblet (vent a taille) trellis.
Definition: grapevine.cpp:1065
-
CanopyGenerator::disableElementLabels
void disableElementLabels()
Toggle off primitive data element type labels.
Definition: CanopyGenerator.cpp:3375
-
CanopyGenerator::loadXML
void loadXML(const char *filename, bool build=true)
Reads the XML file of the given name and stores all the configured canopy parameters.
Definition: CanopyGenerator.cpp:2068
-
CanopyGenerator::grapevineUnilateral
uint grapevineUnilateral(const UnilateralGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a unilateral trellis.
Definition: grapevine.cpp:830
-
CanopyGenerator::disableMessages
void disableMessages()
Disable standard messages from being printed to screen (default is to enable messages)
Definition: CanopyGenerator.cpp:3230
-
CanopyGenerator::grapevineVSP
uint grapevineVSP(const VSPGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a vertical shoot positioned (VSP) trellis.
Definition: grapevine.cpp:150
-
CanopyGenerator::getPlantCount
uint getPlantCount()
Get the current number of plants added to the Canopy Generator.
Definition: CanopyGenerator.cpp:3222
-
CanopyGenerator::getFruitUUIDs
std::vector< uint > getFruitUUIDs()
Get the unique universal identifiers (UUIDs) for all fruit primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3167
-
CanopyGenerator::CanopyGenerator
CanopyGenerator(helios::Context *context)
Canopy geometry generator constructor.
Definition: CanopyGenerator.cpp:1893
-
CanopyGenerator::seedRandomGenerator
void seedRandomGenerator(uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition: CanopyGenerator.cpp:3226
-
CanopyGenerator::bean
uint bean(const BeanParameters &params, const helios::vec3 &origin)
Function to add an individual bean plant.
Definition: bean.cpp:291
-
CanopyGenerator::buildIndividualPlants
void buildIndividualPlants()
Builds individual plants based on the stored canopy parameters (using canopy_origin as the position)
Definition: CanopyGenerator.cpp:3244
-
CanopyGenerator::createElementLabels
void createElementLabels()
Create primitive data that explicitly labels all primitives according to the plant element they corre...
Definition: CanopyGenerator.cpp:3371
-
CanopyGenerator::selfTest
int selfTest()
Unit testing routine.
Definition: CanopyGenerator.cpp:1907
-
CanopyGenerator::walnut
uint walnut(const WalnutCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual walnut tree.
Definition: walnut.cpp:333
-
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition: Context.cpp:2377
-
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition: Context.cpp:2353
-
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition: Context.cpp:2256
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition: Context.cpp:2642
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition: Context.cpp:2609
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Texture
Texture map data structure.
Definition: Context.h:67
-
helios::Texture::getSolidFraction
float getSolidFraction() const
Get the solid fraction of the texture transparency channel (if it exists)
Definition: Context.cpp:145
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::XMLloadrgba
helios::RGBAcolor XMLloadrgba(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into an RGBA color vector.
Definition: global.cpp:2962
-
helios::XMLloadvec2
helios::vec2 XMLloadvec2(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a vec2.
Definition: global.cpp:2857
-
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition: global.cpp:2977
-
helios::XMLloadint
int XMLloadint(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into an int.
Definition: global.cpp:2825
-
helios::XMLloadfloat
float XMLloadfloat(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a float.
Definition: global.cpp:2808
-
helios::XMLloadstring
std::string XMLloadstring(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a string.
Definition: global.cpp:2842
-
helios::XMLloadvec3
helios::vec3 XMLloadvec3(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a vec3.
Definition: global.cpp:2872
-
helios::XMLloadint2
helios::int2 XMLloadint2(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a vec2.
Definition: global.cpp:2902
-
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:5809
-
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:4550
-
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition: global.cpp:1943
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
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helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
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helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
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helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
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BaseCanopyParameters
Base struct class for Canopy parameters.
Definition: CanopyGenerator.h:25
-
BaseCanopyParameters::canopy_origin
helios::vec3 canopy_origin
Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places th...
Definition: CanopyGenerator.h:50
-
BaseCanopyParameters::BaseCanopyParameters
BaseCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:28
-
BaseCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:37
-
BaseCanopyParameters::canopy_rotation
float canopy_rotation
Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal t...
Definition: CanopyGenerator.h:53
- -
BaseGrapeVineParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:284
-
BaseGrapeVineParameters::shoot_radius_spread
float shoot_radius_spread
Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be...
Definition: CanopyGenerator.h:326
-
BaseGrapeVineParameters::missing_plant_probability
float missing_plant_probability
Probability for a plant to be missing.
Definition: CanopyGenerator.h:281
-
BaseGrapeVineParameters::dead_probability
float dead_probability
Probability for a plant to be dead, i.e. without any leaves or grapes.
Definition: CanopyGenerator.h:275
-
BaseGrapeVineParameters::cluster_radius
float cluster_radius
Maximum horizontal radius of grape clusters.
Definition: CanopyGenerator.h:347
-
BaseGrapeVineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:392
-
BaseGrapeVineParameters::cluster_height_max
float cluster_height_max
Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
Definition: CanopyGenerator.h:352
-
BaseGrapeVineParameters::BaseGrapeVineParameters
BaseGrapeVineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:339
-
BaseGrapeVineParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:264
-
BaseGrapeVineParameters::leaf_spacing_fraction_spread
float leaf_spacing_fraction_spread
Spread value for the leaf spacing fraction. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:336
-
BaseGrapeVineParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition: CanopyGenerator.h:270
-
BaseGrapeVineParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:289
-
BaseGrapeVineParameters::grape_subdivisions
uint grape_subdivisions
Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subd...
Definition: CanopyGenerator.h:360
-
BaseGrapeVineParameters::plant_spacing_spread
float plant_spacing_spread
Spread value for the plant spacing. The spacing between adjacent plants along a row would vary betwee...
Definition: CanopyGenerator.h:286
-
BaseGrapeVineParameters::shoot_length_spread
float shoot_length_spread
Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be...
Definition: CanopyGenerator.h:321
-
BaseGrapeVineParameters::leaf_spacing_fraction
float leaf_spacing_fraction
Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = ...
Definition: CanopyGenerator.h:334
-
BaseGrapeVineParameters::trunk_height_spread
float trunk_height_spread
Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be...
Definition: CanopyGenerator.h:296
-
BaseGrapeVineParameters::shoots_per_cordon_spread
uint shoots_per_cordon_spread
Spread value for the number of shoots per cordon. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:331
-
BaseGrapeVineParameters::cordon_radius
float cordon_radius
Radius of cordon branches.
Definition: CanopyGenerator.h:314
-
BaseGrapeVineParameters::trunk_radius_spread
float trunk_radius_spread
Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be...
Definition: CanopyGenerator.h:301
-
BaseGrapeVineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:612
-
BaseGrapeVineParameters::leaf_width
float leaf_width
Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is th...
Definition: CanopyGenerator.h:256
-
BaseGrapeVineParameters::cordon_height_spread
float cordon_height_spread
Spread value for the cordon height. With any new canopy or plant generation, the cordon height would ...
Definition: CanopyGenerator.h:311
-
BaseGrapeVineParameters::canopy_rotation_spread
float canopy_rotation_spread
Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotat...
Definition: CanopyGenerator.h:368
-
BaseGrapeVineParameters::wood_subdivisions_spread
int wood_subdivisions_spread
Spread value for the number of wood subdivisions. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:272
-
BaseGrapeVineParameters::shoots_per_cordon
uint shoots_per_cordon
Number of shoots on each cordon.
Definition: CanopyGenerator.h:329
-
BaseGrapeVineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:616
-
BaseGrapeVineParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition: CanopyGenerator.h:294
-
BaseGrapeVineParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:261
-
BaseGrapeVineParameters::shoot_length
float shoot_length
Length of shoots.
Definition: CanopyGenerator.h:319
-
BaseGrapeVineParameters::cluster_height_max_spread
float cluster_height_max_spread
Spread value for the cluster height. With any new canopy or plant generation, the cluster height woul...
Definition: CanopyGenerator.h:354
-
BaseGrapeVineParameters::grape_subdivisions_spread
uint grape_subdivisions_spread
Spread value for the number of grape subdivisions. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:362
-
BaseGrapeVineParameters::trunk_radius
float trunk_radius
Radius of the trunk at the widest point.
Definition: CanopyGenerator.h:299
-
BaseGrapeVineParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition: CanopyGenerator.h:324
-
BaseGrapeVineParameters::cordon_length
float cordon_length
Length of the cordons. By default, half the plant spacing.
Definition: CanopyGenerator.h:304
-
BaseGrapeVineParameters::cluster_radius_spread
float cluster_radius_spread
Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius woul...
Definition: CanopyGenerator.h:349
-
BaseGrapeVineParameters::grape_color
helios::RGBcolor grape_color
Color of grapes.
Definition: CanopyGenerator.h:357
-
BaseGrapeVineParameters::cordon_radius_spread
float cordon_radius_spread
Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would ...
Definition: CanopyGenerator.h:316
-
BaseGrapeVineParameters::leaf_width_spread
float leaf_width_spread
Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf wi...
Definition: CanopyGenerator.h:258
-
BaseGrapeVineParameters::grape_radius_spread
float grape_radius_spread
Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be...
Definition: CanopyGenerator.h:344
-
BaseGrapeVineParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:339
-
BaseGrapeVineParameters::row_spacing_spread
float row_spacing_spread
Spread value for the row spacing. This allows to vary the alignment of plants along a row....
Definition: CanopyGenerator.h:291
-
BaseGrapeVineParameters::cordon_height
float cordon_height
Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
Definition: CanopyGenerator.h:309
-
BaseGrapeVineParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition: CanopyGenerator.h:267
-
BaseGrapeVineParameters::grape_radius
float grape_radius
Radius of grape berries.
Definition: CanopyGenerator.h:342
-
BaseGrapeVineParameters::cordon_length_spread
float cordon_length_spread
Spread value for the cordon length. With any new canopy or plant generation, the cordon length would ...
Definition: CanopyGenerator.h:306
-
BeanParameters
Parameters defining the bean plant canopy.
Definition: CanopyGenerator.h:983
-
BeanParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:1030
-
BeanParameters::leaflet_length
float leaflet_length
Length of the leaflet from base to tip leaf.
Definition: CanopyGenerator.h:1027
-
BeanParameters::pod_length
float pod_length
Length of bean pods.
Definition: CanopyGenerator.h:1042
-
BeanParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:1006
-
BeanParameters::BeanParameters
BeanParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1768
-
BeanParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition: CanopyGenerator.h:1018
-
BeanParameters::pod_color
helios::RGBcolor pod_color
Color of bean pods.
Definition: CanopyGenerator.h:1045
-
BeanParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:1009
-
BeanParameters::stem_length
float stem_length
Length of stems before splitting to leaflets.
Definition: CanopyGenerator.h:1024
-
BeanParameters::pod_subdivisions
uint pod_subdivisions
Number of lengthwise subdivisions making up pods.
Definition: CanopyGenerator.h:1048
-
BeanParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1885
-
BeanParameters::stem_radius
float stem_radius
Radius of main stem at base.
Definition: CanopyGenerator.h:1021
-
BeanParameters::germination_probability
float germination_probability
Probability that a plant in the canopy germinated.
Definition: CanopyGenerator.h:1039
-
BeanParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:1012
-
BeanParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1889
-
BeanParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1806
-
BeanParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition: CanopyGenerator.h:1015
-
BeanParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:1033
-
BeanParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:1036
-
ConicalCrownsCanopyParameters
Parameters defining the canopy with conical crowns.
Definition: CanopyGenerator.h:171
-
ConicalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:224
-
ConicalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition: CanopyGenerator.h:206
-
ConicalCrownsCanopyParameters::ConicalCrownsCanopyParameters
ConicalCrownsCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:233
-
ConicalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:197
-
ConicalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition: CanopyGenerator.h:203
-
ConicalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition: CanopyGenerator.h:200
-
ConicalCrownsCanopyParameters::crown_height
float crown_height
Height of the conical crowns.
Definition: CanopyGenerator.h:215
-
ConicalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition: CanopyGenerator.h:221
-
ConicalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:335
-
ConicalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition: CanopyGenerator.h:218
-
ConicalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition: CanopyGenerator.h:194
-
ConicalCrownsCanopyParameters::crown_radius
float crown_radius
Radius of the conical crowns at the base.
Definition: CanopyGenerator.h:212
-
ConicalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition: CanopyGenerator.h:209
-
ConicalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:331
-
ConicalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:261
-
GobletGrapevineParameters
Parameters defining the grapevine canopy with goblet (vent a taille) trellis.
Definition: CanopyGenerator.h:464
-
GobletGrapevineParameters::GobletGrapevineParameters
GobletGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:794
-
GobletGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:834
-
GobletGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:838
-
GobletGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:830
-
HomogeneousCanopyParameters
Parameters defining the homogeneous canopy.
Definition: CanopyGenerator.h:58
-
HomogeneousCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:75
-
HomogeneousCanopyParameters::buffer
std::string buffer
String specifying whether leaves should be placed so that leaf edges do not fall outside the specifie...
Definition: CanopyGenerator.h:108
-
HomogeneousCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition: CanopyGenerator.h:81
-
HomogeneousCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition: CanopyGenerator.h:90
-
HomogeneousCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:127
-
HomogeneousCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:131
-
HomogeneousCanopyParameters::canopy_extent
helios::vec2 canopy_extent
Horizontal extent of the canopy in the x- and y-directions.
Definition: CanopyGenerator.h:102
-
HomogeneousCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:84
-
HomogeneousCanopyParameters::canopy_height
float canopy_height
Height of the canopy.
Definition: CanopyGenerator.h:99
-
HomogeneousCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition: CanopyGenerator.h:93
-
HomogeneousCanopyParameters::HomogeneousCanopyParameters
HomogeneousCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:51
-
HomogeneousCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition: CanopyGenerator.h:87
-
HomogeneousCanopyParameters::leaf_area_index
float leaf_area_index
One-sided leaf area index of the canopy.
Definition: CanopyGenerator.h:96
-
SorghumCanopyParameters
Parameters defining Sorghum plant canopy.
Definition: CanopyGenerator.h:764
-
SorghumCanopyParameters::s5_stem_subdivisions
int s5_stem_subdivisions
Number of stem radial subdivisions for stage 5.
Definition: CanopyGenerator.h:944
-
SorghumCanopyParameters::s2_stem_subdivisions
float s2_stem_subdivisions
Number of stem radial subdivisions for stage 2.
Definition: CanopyGenerator.h:833
-
SorghumCanopyParameters::s1_leaf1_angle
float s1_leaf1_angle
Leaf1 vertical angle of rotation for stage 1.
Definition: CanopyGenerator.h:810
-
SorghumCanopyParameters::s5_stem_length
float s5_stem_length
Length of the sorghum stem for stage 5.
Definition: CanopyGenerator.h:935
-
SorghumCanopyParameters::s4_seed_texture_file
std::string s4_seed_texture_file
Texture map of the panicle for stage 4.
Definition: CanopyGenerator.h:915
-
SorghumCanopyParameters::s5_number_of_leaves
int s5_number_of_leaves
Number of leaves for the sorghum plant, stage 5.
Definition: CanopyGenerator.h:962
-
SorghumCanopyParameters::s5_mean_leaf_angle
float s5_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 1...
Definition: CanopyGenerator.h:965
-
SorghumCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1760
-
SorghumCanopyParameters::s4_stem_length
float s4_stem_length
Length of the sorghum stem for stage 4.
Definition: CanopyGenerator.h:900
-
SorghumCanopyParameters::s3_leaf_subdivisions
helios::int2 s3_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
Definition: CanopyGenerator.h:886
-
SorghumCanopyParameters::s1_leaf_texture_file
std::string s1_leaf_texture_file
Texture map for sorghum leaf1 for stage 1.
Definition: CanopyGenerator.h:822
-
SorghumCanopyParameters::s1_leaf_size2
helios::vec2 s1_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition: CanopyGenerator.h:804
-
SorghumCanopyParameters::s4_stem_radius
float s4_stem_radius
Radius of the sorghum stem for stage 4.
Definition: CanopyGenerator.h:903
-
SorghumCanopyParameters::s3_mean_leaf_angle
float s3_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is ...
Definition: CanopyGenerator.h:892
-
SorghumCanopyParameters::s4_stem_subdivisions
float s4_stem_subdivisions
Number of stem radial subdivisions for stage 4.
Definition: CanopyGenerator.h:906
-
SorghumCanopyParameters::s2_leaf1_angle
float s2_leaf1_angle
Leaf1 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:851
-
SorghumCanopyParameters::s2_leaf_texture_file
std::string s2_leaf_texture_file
Texture map for sorghum leaf for stage 2.
Definition: CanopyGenerator.h:869
-
SorghumCanopyParameters::s5_panicle_subdivisions
int s5_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
Definition: CanopyGenerator.h:950
-
SorghumCanopyParameters::s2_leaf4_angle
float s2_leaf4_angle
Leaf4 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:860
-
SorghumCanopyParameters::s4_mean_leaf_angle
float s4_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5...
Definition: CanopyGenerator.h:927
-
SorghumCanopyParameters::s2_leaf5_angle
float s2_leaf5_angle
Leaf5 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:863
-
SorghumCanopyParameters::s2_leaf_subdivisions
helios::int2 s2_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
Definition: CanopyGenerator.h:866
-
SorghumCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:972
-
SorghumCanopyParameters::s4_leaf_size
helios::vec2 s4_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
Definition: CanopyGenerator.h:918
-
SorghumCanopyParameters::s2_leaf3_angle
float s2_leaf3_angle
Leaf3 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:857
-
SorghumCanopyParameters::s4_leaf_subdivisions
helios::int2 s4_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
Definition: CanopyGenerator.h:921
-
SorghumCanopyParameters::s2_stem_radius
float s2_stem_radius
Radius of the sorghum stem for stage 2.
Definition: CanopyGenerator.h:830
-
SorghumCanopyParameters::SorghumCanopyParameters
SorghumCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1310
-
SorghumCanopyParameters::s5_stem_bend
float s5_stem_bend
Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the i...
Definition: CanopyGenerator.h:941
-
SorghumCanopyParameters::s1_leaf_size1
helios::vec2 s1_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition: CanopyGenerator.h:801
-
SorghumCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1446
-
SorghumCanopyParameters::s5_stem_radius
float s5_stem_radius
Radius of the sorghum stem for stage 5.
Definition: CanopyGenerator.h:938
-
SorghumCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:978
-
SorghumCanopyParameters::s3_stem_radius
float s3_stem_radius
Radius of the sorghum stem for stage 3.
Definition: CanopyGenerator.h:877
-
SorghumCanopyParameters::s5_leaf_texture_file
std::string s5_leaf_texture_file
Texture map for sorghum leaf, stage 5.
Definition: CanopyGenerator.h:968
-
SorghumCanopyParameters::s5_leaf_subdivisions
helios::int2 s5_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
Definition: CanopyGenerator.h:959
-
SorghumCanopyParameters::s1_leaf_size3
helios::vec2 s1_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition: CanopyGenerator.h:807
-
SorghumCanopyParameters::s4_number_of_leaves
int s4_number_of_leaves
Number of leaves for the sorghum plant, stage 4.
Definition: CanopyGenerator.h:924
-
SorghumCanopyParameters::s4_panicle_subdivisions
int s4_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
Definition: CanopyGenerator.h:912
-
SorghumCanopyParameters::s3_stem_length
float s3_stem_length
Length of the sorghum stem for stage 3.
Definition: CanopyGenerator.h:874
-
SorghumCanopyParameters::s3_leaf_texture_file
std::string s3_leaf_texture_file
Texture map for sorghum leaf for stage 3.
Definition: CanopyGenerator.h:895
-
SorghumCanopyParameters::s2_leaf_size3
helios::vec2 s2_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:842
-
SorghumCanopyParameters::s1_stem_radius
float s1_stem_radius
Radius of the sorghum stem for stage 1.
Definition: CanopyGenerator.h:795
-
SorghumCanopyParameters::s5_panicle_size
helios::vec2 s5_panicle_size
Size of panicle in x- and y- directions for stage 5.
Definition: CanopyGenerator.h:947
-
SorghumCanopyParameters::s3_number_of_leaves
int s3_number_of_leaves
Number of leaves along the stem for stage 3.
Definition: CanopyGenerator.h:889
-
SorghumCanopyParameters::s2_leaf_size5
helios::vec2 s2_leaf_size5
Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:848
-
SorghumCanopyParameters::s5_leaf_size
helios::vec2 s5_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
Definition: CanopyGenerator.h:956
-
SorghumCanopyParameters::s1_stem_subdivisions
float s1_stem_subdivisions
Number of stem radial subdivisions for stage 1.
Definition: CanopyGenerator.h:798
-
SorghumCanopyParameters::s2_leaf_size4
helios::vec2 s2_leaf_size4
Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:845
-
SorghumCanopyParameters::s1_leaf_subdivisions
helios::int2 s1_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
Definition: CanopyGenerator.h:819
-
SorghumCanopyParameters::s4_leaf_texture_file
std::string s4_leaf_texture_file
Texture map for sorghum leaf, stage 4.
Definition: CanopyGenerator.h:930
-
SorghumCanopyParameters::s2_leaf_size2
helios::vec2 s2_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:839
-
SorghumCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:975
-
SorghumCanopyParameters::s3_leaf_size
helios::vec2 s3_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
Definition: CanopyGenerator.h:883
-
SorghumCanopyParameters::s2_stem_length
float s2_stem_length
Length of the sorghum stem for stage 2.
Definition: CanopyGenerator.h:827
-
SorghumCanopyParameters::s1_leaf2_angle
float s1_leaf2_angle
Leaf2 vertical angle of rotation for stage 1.
Definition: CanopyGenerator.h:813
-
SorghumCanopyParameters::s3_stem_subdivisions
float s3_stem_subdivisions
Number of stem radial subdivisions for stage 3.
Definition: CanopyGenerator.h:880
-
SorghumCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1764
-
SorghumCanopyParameters::s1_stem_length
float s1_stem_length
Length of the sorghum stem for stage 1.
Definition: CanopyGenerator.h:792
-
SorghumCanopyParameters::sorghum_stage
int sorghum_stage
Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation ...
Definition: CanopyGenerator.h:787
-
SorghumCanopyParameters::s1_leaf3_angle
float s1_leaf3_angle
Leaf3 vertical angle of rotation for stage 1.
Definition: CanopyGenerator.h:816
-
SorghumCanopyParameters::s2_leaf_size1
helios::vec2 s2_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:836
-
SorghumCanopyParameters::s5_seed_texture_file
std::string s5_seed_texture_file
Texture map of the panicle for stage 5.
Definition: CanopyGenerator.h:953
-
SorghumCanopyParameters::s4_panicle_size
helios::vec2 s4_panicle_size
Size of panicle in x- and y- directions for stage 4.
Definition: CanopyGenerator.h:909
-
SorghumCanopyParameters::s2_leaf2_angle
float s2_leaf2_angle
Leaf2 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:854
-
SphericalCrownsCanopyParameters
Parameters defining the canopy with spherical crowns.
Definition: CanopyGenerator.h:113
-
SphericalCrownsCanopyParameters::crown_radius
helios::vec3 crown_radius
Radius of the spherical crowns.
Definition: CanopyGenerator.h:154
-
SphericalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition: CanopyGenerator.h:136
-
SphericalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition: CanopyGenerator.h:142
-
SphericalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition: CanopyGenerator.h:145
-
SphericalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:163
-
SphericalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition: CanopyGenerator.h:160
-
SphericalCrownsCanopyParameters::SphericalCrownsCanopyParameters
SphericalCrownsCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:135
-
SphericalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:139
-
SphericalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition: CanopyGenerator.h:148
-
SphericalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition: CanopyGenerator.h:151
-
SphericalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition: CanopyGenerator.h:157
-
SphericalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:161
-
SphericalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:229
-
SphericalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:225
-
SplitGrapevineParameters
Parameters defining the grapevine canopy with a split (quad) trellis.
Definition: CanopyGenerator.h:398
-
SplitGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:740
-
SplitGrapevineParameters::shoot_angle_base_spread
float shoot_angle_base_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition: CanopyGenerator.h:428
-
SplitGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:717
-
SplitGrapevineParameters::shoot_angle_base
float shoot_angle_base
Average angle of the shoot at the base (shoot_angle_base=0 points shoots upward; shoot_angle_base=M_P...
Definition: CanopyGenerator.h:426
-
SplitGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:736
-
SplitGrapevineParameters::SplitGrapevineParameters
SplitGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:670
-
SplitGrapevineParameters::cordon_spacing
float cordon_spacing
Spacing between two opposite cordons.
Definition: CanopyGenerator.h:421
-
SplitGrapevineParameters::cordon_spacing_spread
float cordon_spacing_spread
Spread value for the cordon spacing. With any new canopy or plant generation, the cordon spacing woul...
Definition: CanopyGenerator.h:423
-
SplitGrapevineParameters::shoot_angle_tip_spread
float shoot_angle_tip_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition: CanopyGenerator.h:433
-
SplitGrapevineParameters::shoot_angle_tip
float shoot_angle_tip
Average angle of the shoot at the tip (shoot_angle=0 is a completely vertical shoot; shoot_angle=M_PI...
Definition: CanopyGenerator.h:431
-
StrawberryParameters
Parameters defining the strawberry plant canopy.
Definition: CanopyGenerator.h:626
-
StrawberryParameters::stem_subdivisions
int stem_subdivisions
Number of radial subdivisions for stem tubes.
Definition: CanopyGenerator.h:661
-
StrawberryParameters::stems_per_plant
int stems_per_plant
Number of stems per plant.
Definition: CanopyGenerator.h:664
-
StrawberryParameters::fruit_radius
float fruit_radius
Radius of strawberry fruit.
Definition: CanopyGenerator.h:682
-
StrawberryParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:670
-
StrawberryParameters::StrawberryParameters
StrawberryParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1081
-
StrawberryParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition: CanopyGenerator.h:688
-
StrawberryParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:679
-
StrawberryParameters::plant_height
float plant_height
Height of the plant.
Definition: CanopyGenerator.h:676
-
StrawberryParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1119
-
StrawberryParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1193
-
StrawberryParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:652
-
StrawberryParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1197
-
StrawberryParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for strawberry fruit.
Definition: CanopyGenerator.h:685
-
StrawberryParameters::clusters_per_stem
float clusters_per_stem
Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
Definition: CanopyGenerator.h:691
-
StrawberryParameters::stem_radius
float stem_radius
Radius of stems.
Definition: CanopyGenerator.h:667
-
StrawberryParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:655
-
StrawberryParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:673
-
StrawberryParameters::stem_color
helios::RGBcolor stem_color
Color of stems.
Definition: CanopyGenerator.h:658
-
StrawberryParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:649
-
TomatoParameters
Parameters defining the tomato plant canopy.
Definition: CanopyGenerator.h:565
-
TomatoParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition: CanopyGenerator.h:600
-
TomatoParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1073
-
TomatoParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:588
-
TomatoParameters::fruit_color
helios::RGBcolor fruit_color
Color of tomato fruit.
Definition: CanopyGenerator.h:618
-
TomatoParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:591
-
TomatoParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:612
-
TomatoParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition: CanopyGenerator.h:621
-
TomatoParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition: CanopyGenerator.h:597
-
TomatoParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:606
-
TomatoParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1008
-
TomatoParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:603
-
TomatoParameters::TomatoParameters
TomatoParameters()
Default constructor.
Definition: CanopyGenerator.cpp:976
-
TomatoParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:594
-
TomatoParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1077
-
TomatoParameters::plant_height
float plant_height
Height of the plant.
Definition: CanopyGenerator.h:609
-
TomatoParameters::fruit_radius
float fruit_radius
Radius of tomato fruit.
Definition: CanopyGenerator.h:615
-
UnilateralGrapevineParameters
Parameters defining the grapevine canopy with unilateral trellis.
Definition: CanopyGenerator.h:438
-
UnilateralGrapevineParameters::UnilateralGrapevineParameters
UnilateralGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:744
-
UnilateralGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:786
-
UnilateralGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:782
-
UnilateralGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:790
-
VSPGrapevineParameters
Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis.
Definition: CanopyGenerator.h:373
-
VSPGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:658
-
VSPGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:662
-
VSPGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:666
-
VSPGrapevineParameters::VSPGrapevineParameters
VSPGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:620
-
WalnutCanopyParameters
Parameters defining the walnut tree canopy.
Definition: CanopyGenerator.h:696
-
WalnutCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:759
-
WalnutCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for branch tubes.
Definition: CanopyGenerator.h:731
-
WalnutCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:744
-
WalnutCanopyParameters::WalnutCanopyParameters
WalnutCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1201
-
WalnutCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1302
-
WalnutCanopyParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for walnut fruit.
Definition: CanopyGenerator.h:753
-
WalnutCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:722
-
WalnutCanopyParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition: CanopyGenerator.h:756
-
WalnutCanopyParameters::trunk_radius
float trunk_radius
Radius of trunk.
Definition: CanopyGenerator.h:734
-
WalnutCanopyParameters::fruit_radius
float fruit_radius
Radius of walnuts.
Definition: CanopyGenerator.h:750
-
WalnutCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:725
-
WalnutCanopyParameters::leaf_length
float leaf_length
Maximum length of leaves along midrib.
Definition: CanopyGenerator.h:719
-
WalnutCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1237
-
WalnutCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for wood/branches.
Definition: CanopyGenerator.h:728
-
WalnutCanopyParameters::branch_length
helios::vec3 branch_length
Average length of branches in each recursive branch level. For example, the first (....
Definition: CanopyGenerator.h:740
-
WalnutCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1306
-
WalnutCanopyParameters::trunk_height
float trunk_height
Height of the trunk.
Definition: CanopyGenerator.h:737
-
WalnutCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:747
-
WhiteSpruceCanopyParameters
Parameters defining the white spruce.
Definition: CanopyGenerator.h:489
-
WhiteSpruceCanopyParameters::needle_width
float needle_width
Width of needles.
Definition: CanopyGenerator.h:512
-
WhiteSpruceCanopyParameters::needle_subdivisions
helios::int2 needle_subdivisions
Number of sub-division segments per needle.
Definition: CanopyGenerator.h:518
-
WhiteSpruceCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:884
-
WhiteSpruceCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:972
-
WhiteSpruceCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition: CanopyGenerator.h:524
-
WhiteSpruceCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition: CanopyGenerator.h:557
-
WhiteSpruceCanopyParameters::needle_length
float needle_length
Length of needles.
Definition: CanopyGenerator.h:515
-
WhiteSpruceCanopyParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition: CanopyGenerator.h:530
-
WhiteSpruceCanopyParameters::level_spacing
float level_spacing
Vertical spacing between branching levels.
Definition: CanopyGenerator.h:545
-
WhiteSpruceCanopyParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition: CanopyGenerator.h:542
-
WhiteSpruceCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition: CanopyGenerator.h:527
-
WhiteSpruceCanopyParameters::shoot_angle
float shoot_angle
Maximum shoot angle.
Definition: CanopyGenerator.h:551
-
WhiteSpruceCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:560
-
WhiteSpruceCanopyParameters::base_height
float base_height
Height at which branches start.
Definition: CanopyGenerator.h:536
-
WhiteSpruceCanopyParameters::crown_radius
float crown_radius
Radius of the crown at the base.
Definition: CanopyGenerator.h:539
-
WhiteSpruceCanopyParameters::needle_color
helios::RGBcolor needle_color
Color of needles.
Definition: CanopyGenerator.h:521
-
WhiteSpruceCanopyParameters::trunk_radius
float trunk_radius
Radius of the trunk at the base.
Definition: CanopyGenerator.h:533
-
WhiteSpruceCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:968
-
WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters
WhiteSpruceCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:842
-
WhiteSpruceCanopyParameters::branches_per_level
int branches_per_level
Number of primary branches on the bottom level.
Definition: CanopyGenerator.h:548
-
WhiteSpruceCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition: CanopyGenerator.h:554
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBAcolor::r
float r
Red color component.
Definition: helios_vector_types.h:1029
-
helios::RGBAcolor::a
float a
Alpha (transparency) component.
Definition: helios_vector_types.h:1038
-
helios::RGBAcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:1035
-
helios::RGBAcolor::g
float g
Green color component.
Definition: helios_vector_types.h:1032
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
evaluateCDFresid
float evaluateCDFresid(float thetaL, std::vector< float > &ru_v, const void *a_distribution)
Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf ...
Definition CanopyGenerator.cpp:3321
+
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
Draw a random number (float) from a uniform distribution between -V and V.
Definition CanopyGenerator.cpp:3004
+ +
CanopyGenerator::whitespruce
uint whitespruce(const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual white spruce tree.
Definition whitespruce.cpp:6
+
CanopyGenerator::buildCanopy
void buildCanopy(const HomogeneousCanopyParameters &params)
Build a canopy consisting of a homogeneous volume of leaves.
Definition CanopyGenerator.cpp:2340
+
CanopyGenerator::storeCanopyParameters
void storeCanopyParameters(Args &&... args)
Stores the given canopy parameters.
Definition CanopyGenerator.cpp:2055
+
CanopyGenerator::sorghum
uint sorghum(const SorghumCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual sorghum plant.
Definition sorghum.cpp:8
+
CanopyGenerator::getLeafUUIDs
std::vector< std::vector< uint > > getLeafUUIDs(uint PlantID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the plant leaves.
Definition CanopyGenerator.cpp:3140
+
CanopyGenerator::enableMessages
void enableMessages()
Enable standard messages to be printed to screen (default is to enable messages)
Definition CanopyGenerator.cpp:3234
+
CanopyGenerator::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs()
Get the unique universal identifiers (UUIDs) for all trunk primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3117
+
CanopyGenerator::tomato
uint tomato(const TomatoParameters &params, const helios::vec3 &origin)
Function to add an individual tomato plant.
Definition tomato.cpp:139
+
CanopyGenerator::buildGround
void buildGround(const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file)
Build a ground consisting of texture sub-tiles and sub-patches, which can be different sizes.
Definition CanopyGenerator.cpp:2296
+
CanopyGenerator::strawberry
uint strawberry(const StrawberryParameters &params, const helios::vec3 &origin)
Function to add an individual strawberry plant.
Definition strawberry.cpp:215
+
CanopyGenerator::getGroundUUIDs
std::vector< uint > getGroundUUIDs()
Get the unique universal identifiers (UUIDs) for the primitives that make up the ground.
Definition CanopyGenerator.cpp:3180
+
CanopyGenerator::getLeafUUIDs
std::vector< uint > getLeafUUIDs()
Get the unique universal identifiers (UUIDs) for all leaf primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3150
+
CanopyGenerator::getBranchUUIDs
std::vector< uint > getBranchUUIDs()
Get the unique universal identifiers (UUIDs) for all branch primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3134
+
CanopyGenerator::buildCanopies
void buildCanopies()
Builds canopies for all the stored canopy parameters.
Definition CanopyGenerator.cpp:2334
+
CanopyGenerator::grapevineSplit
uint grapevineSplit(const SplitGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a split trellis.
Definition grapevine.cpp:464
+
CanopyGenerator::getAllUUIDs
std::vector< uint > getAllUUIDs(uint PlantID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition CanopyGenerator.cpp:3196
+
CanopyGenerator::grapevineGoblet
uint grapevineGoblet(const GobletGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a goblet (vent a taille) trellis.
Definition grapevine.cpp:1065
+
CanopyGenerator::disableElementLabels
void disableElementLabels()
Toggle off primitive data element type labels.
Definition CanopyGenerator.cpp:3375
+
CanopyGenerator::loadXML
void loadXML(const char *filename, bool build=true)
Reads the XML file of the given name and stores all the configured canopy parameters.
Definition CanopyGenerator.cpp:2068
+
CanopyGenerator::grapevineUnilateral
uint grapevineUnilateral(const UnilateralGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a unilateral trellis.
Definition grapevine.cpp:830
+
CanopyGenerator::disableMessages
void disableMessages()
Disable standard messages from being printed to screen (default is to enable messages)
Definition CanopyGenerator.cpp:3230
+
CanopyGenerator::grapevineVSP
uint grapevineVSP(const VSPGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a vertical shoot positioned (VSP) trellis.
Definition grapevine.cpp:150
+
CanopyGenerator::getPlantCount
uint getPlantCount()
Get the current number of plants added to the Canopy Generator.
Definition CanopyGenerator.cpp:3222
+
CanopyGenerator::getFruitUUIDs
std::vector< uint > getFruitUUIDs()
Get the unique universal identifiers (UUIDs) for all fruit primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3167
+
CanopyGenerator::CanopyGenerator
CanopyGenerator(helios::Context *context)
Canopy geometry generator constructor.
Definition CanopyGenerator.cpp:1893
+
CanopyGenerator::seedRandomGenerator
void seedRandomGenerator(uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition CanopyGenerator.cpp:3226
+
CanopyGenerator::bean
uint bean(const BeanParameters &params, const helios::vec3 &origin)
Function to add an individual bean plant.
Definition bean.cpp:291
+
CanopyGenerator::buildIndividualPlants
void buildIndividualPlants()
Builds individual plants based on the stored canopy parameters (using canopy_origin as the position)
Definition CanopyGenerator.cpp:3244
+
CanopyGenerator::createElementLabels
void createElementLabels()
Create primitive data that explicitly labels all primitives according to the plant element they corre...
Definition CanopyGenerator.cpp:3371
+
CanopyGenerator::selfTest
int selfTest()
Unit testing routine.
Definition CanopyGenerator.cpp:1907
+
CanopyGenerator::walnut
uint walnut(const WalnutCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual walnut tree.
Definition walnut.cpp:333
+
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition Context.cpp:2377
+
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition Context.cpp:2353
+
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition Context.cpp:2256
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition Context.cpp:2642
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition Context.cpp:2609
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Texture
Texture map data structure.
Definition Context.h:67
+
helios::Texture::getSolidFraction
float getSolidFraction() const
Get the solid fraction of the texture transparency channel (if it exists)
Definition Context.cpp:145
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::XMLloadrgba
helios::RGBAcolor XMLloadrgba(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into an RGBA color vector.
Definition global.cpp:2962
+
helios::XMLloadvec2
helios::vec2 XMLloadvec2(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a vec2.
Definition global.cpp:2857
+
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition global.cpp:2977
+
helios::XMLloadint
int XMLloadint(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into an int.
Definition global.cpp:2825
+
helios::XMLloadfloat
float XMLloadfloat(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a float.
Definition global.cpp:2808
+
helios::XMLloadstring
std::string XMLloadstring(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a string.
Definition global.cpp:2842
+
helios::XMLloadvec3
helios::vec3 XMLloadvec3(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a vec3.
Definition global.cpp:2872
+
helios::XMLloadint2
helios::int2 XMLloadint2(pugi::xml_node node, const char *field)
Function to load and convert a field in a pugi XML node into a vec2.
Definition global.cpp:2902
+
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:5809
+
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:4550
+
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition global.cpp:1943
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
BaseCanopyParameters
Base struct class for Canopy parameters.
Definition CanopyGenerator.h:25
+
BaseCanopyParameters::canopy_origin
helios::vec3 canopy_origin
Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places th...
Definition CanopyGenerator.h:50
+
BaseCanopyParameters::BaseCanopyParameters
BaseCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:28
+
BaseCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:37
+
BaseCanopyParameters::canopy_rotation
float canopy_rotation
Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal t...
Definition CanopyGenerator.h:53
+ +
BaseGrapeVineParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:284
+
BaseGrapeVineParameters::shoot_radius_spread
float shoot_radius_spread
Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be...
Definition CanopyGenerator.h:326
+
BaseGrapeVineParameters::missing_plant_probability
float missing_plant_probability
Probability for a plant to be missing.
Definition CanopyGenerator.h:281
+
BaseGrapeVineParameters::dead_probability
float dead_probability
Probability for a plant to be dead, i.e. without any leaves or grapes.
Definition CanopyGenerator.h:275
+
BaseGrapeVineParameters::cluster_radius
float cluster_radius
Maximum horizontal radius of grape clusters.
Definition CanopyGenerator.h:347
+
BaseGrapeVineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:392
+
BaseGrapeVineParameters::cluster_height_max
float cluster_height_max
Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
Definition CanopyGenerator.h:352
+
BaseGrapeVineParameters::BaseGrapeVineParameters
BaseGrapeVineParameters()
Default constructor.
Definition CanopyGenerator.cpp:339
+
BaseGrapeVineParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:264
+
BaseGrapeVineParameters::leaf_spacing_fraction_spread
float leaf_spacing_fraction_spread
Spread value for the leaf spacing fraction. With any new canopy or plant generation,...
Definition CanopyGenerator.h:336
+
BaseGrapeVineParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition CanopyGenerator.h:270
+
BaseGrapeVineParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:289
+
BaseGrapeVineParameters::grape_subdivisions
uint grape_subdivisions
Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subd...
Definition CanopyGenerator.h:360
+
BaseGrapeVineParameters::plant_spacing_spread
float plant_spacing_spread
Spread value for the plant spacing. The spacing between adjacent plants along a row would vary betwee...
Definition CanopyGenerator.h:286
+
BaseGrapeVineParameters::shoot_length_spread
float shoot_length_spread
Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be...
Definition CanopyGenerator.h:321
+
BaseGrapeVineParameters::leaf_spacing_fraction
float leaf_spacing_fraction
Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = ...
Definition CanopyGenerator.h:334
+
BaseGrapeVineParameters::trunk_height_spread
float trunk_height_spread
Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be...
Definition CanopyGenerator.h:296
+
BaseGrapeVineParameters::shoots_per_cordon_spread
uint shoots_per_cordon_spread
Spread value for the number of shoots per cordon. With any new canopy or plant generation,...
Definition CanopyGenerator.h:331
+
BaseGrapeVineParameters::cordon_radius
float cordon_radius
Radius of cordon branches.
Definition CanopyGenerator.h:314
+
BaseGrapeVineParameters::trunk_radius_spread
float trunk_radius_spread
Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be...
Definition CanopyGenerator.h:301
+
BaseGrapeVineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:612
+
BaseGrapeVineParameters::leaf_width
float leaf_width
Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is th...
Definition CanopyGenerator.h:256
+
BaseGrapeVineParameters::cordon_height_spread
float cordon_height_spread
Spread value for the cordon height. With any new canopy or plant generation, the cordon height would ...
Definition CanopyGenerator.h:311
+
BaseGrapeVineParameters::canopy_rotation_spread
float canopy_rotation_spread
Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotat...
Definition CanopyGenerator.h:368
+
BaseGrapeVineParameters::wood_subdivisions_spread
int wood_subdivisions_spread
Spread value for the number of wood subdivisions. With any new canopy or plant generation,...
Definition CanopyGenerator.h:272
+
BaseGrapeVineParameters::shoots_per_cordon
uint shoots_per_cordon
Number of shoots on each cordon.
Definition CanopyGenerator.h:329
+
BaseGrapeVineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:616
+
BaseGrapeVineParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition CanopyGenerator.h:294
+
BaseGrapeVineParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:261
+
BaseGrapeVineParameters::shoot_length
float shoot_length
Length of shoots.
Definition CanopyGenerator.h:319
+
BaseGrapeVineParameters::cluster_height_max_spread
float cluster_height_max_spread
Spread value for the cluster height. With any new canopy or plant generation, the cluster height woul...
Definition CanopyGenerator.h:354
+
BaseGrapeVineParameters::grape_subdivisions_spread
uint grape_subdivisions_spread
Spread value for the number of grape subdivisions. With any new canopy or plant generation,...
Definition CanopyGenerator.h:362
+
BaseGrapeVineParameters::trunk_radius
float trunk_radius
Radius of the trunk at the widest point.
Definition CanopyGenerator.h:299
+
BaseGrapeVineParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition CanopyGenerator.h:324
+
BaseGrapeVineParameters::cordon_length
float cordon_length
Length of the cordons. By default, half the plant spacing.
Definition CanopyGenerator.h:304
+
BaseGrapeVineParameters::cluster_radius_spread
float cluster_radius_spread
Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius woul...
Definition CanopyGenerator.h:349
+
BaseGrapeVineParameters::grape_color
helios::RGBcolor grape_color
Color of grapes.
Definition CanopyGenerator.h:357
+
BaseGrapeVineParameters::cordon_radius_spread
float cordon_radius_spread
Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would ...
Definition CanopyGenerator.h:316
+
BaseGrapeVineParameters::leaf_width_spread
float leaf_width_spread
Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf wi...
Definition CanopyGenerator.h:258
+
BaseGrapeVineParameters::grape_radius_spread
float grape_radius_spread
Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be...
Definition CanopyGenerator.h:344
+
BaseGrapeVineParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:339
+
BaseGrapeVineParameters::row_spacing_spread
float row_spacing_spread
Spread value for the row spacing. This allows to vary the alignment of plants along a row....
Definition CanopyGenerator.h:291
+
BaseGrapeVineParameters::cordon_height
float cordon_height
Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
Definition CanopyGenerator.h:309
+
BaseGrapeVineParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition CanopyGenerator.h:267
+
BaseGrapeVineParameters::grape_radius
float grape_radius
Radius of grape berries.
Definition CanopyGenerator.h:342
+
BaseGrapeVineParameters::cordon_length_spread
float cordon_length_spread
Spread value for the cordon length. With any new canopy or plant generation, the cordon length would ...
Definition CanopyGenerator.h:306
+
BeanParameters
Parameters defining the bean plant canopy.
Definition CanopyGenerator.h:983
+
BeanParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:1030
+
BeanParameters::leaflet_length
float leaflet_length
Length of the leaflet from base to tip leaf.
Definition CanopyGenerator.h:1027
+
BeanParameters::pod_length
float pod_length
Length of bean pods.
Definition CanopyGenerator.h:1042
+
BeanParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:1006
+
BeanParameters::BeanParameters
BeanParameters()
Default constructor.
Definition CanopyGenerator.cpp:1768
+
BeanParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition CanopyGenerator.h:1018
+
BeanParameters::pod_color
helios::RGBcolor pod_color
Color of bean pods.
Definition CanopyGenerator.h:1045
+
BeanParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:1009
+
BeanParameters::stem_length
float stem_length
Length of stems before splitting to leaflets.
Definition CanopyGenerator.h:1024
+
BeanParameters::pod_subdivisions
uint pod_subdivisions
Number of lengthwise subdivisions making up pods.
Definition CanopyGenerator.h:1048
+
BeanParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1885
+
BeanParameters::stem_radius
float stem_radius
Radius of main stem at base.
Definition CanopyGenerator.h:1021
+
BeanParameters::germination_probability
float germination_probability
Probability that a plant in the canopy germinated.
Definition CanopyGenerator.h:1039
+
BeanParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:1012
+
BeanParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1889
+
BeanParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1806
+
BeanParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition CanopyGenerator.h:1015
+
BeanParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:1033
+
BeanParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:1036
+
ConicalCrownsCanopyParameters
Parameters defining the canopy with conical crowns.
Definition CanopyGenerator.h:171
+
ConicalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:224
+
ConicalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition CanopyGenerator.h:206
+
ConicalCrownsCanopyParameters::ConicalCrownsCanopyParameters
ConicalCrownsCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:233
+
ConicalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:197
+
ConicalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition CanopyGenerator.h:203
+
ConicalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition CanopyGenerator.h:200
+
ConicalCrownsCanopyParameters::crown_height
float crown_height
Height of the conical crowns.
Definition CanopyGenerator.h:215
+
ConicalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition CanopyGenerator.h:221
+
ConicalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:335
+
ConicalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition CanopyGenerator.h:218
+
ConicalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition CanopyGenerator.h:194
+
ConicalCrownsCanopyParameters::crown_radius
float crown_radius
Radius of the conical crowns at the base.
Definition CanopyGenerator.h:212
+
ConicalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition CanopyGenerator.h:209
+
ConicalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:331
+
ConicalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:261
+
GobletGrapevineParameters
Parameters defining the grapevine canopy with goblet (vent a taille) trellis.
Definition CanopyGenerator.h:464
+
GobletGrapevineParameters::GobletGrapevineParameters
GobletGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:794
+
GobletGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:834
+
GobletGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:838
+
GobletGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:830
+
HomogeneousCanopyParameters
Parameters defining the homogeneous canopy.
Definition CanopyGenerator.h:58
+
HomogeneousCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:75
+
HomogeneousCanopyParameters::buffer
std::string buffer
String specifying whether leaves should be placed so that leaf edges do not fall outside the specifie...
Definition CanopyGenerator.h:108
+
HomogeneousCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition CanopyGenerator.h:81
+
HomogeneousCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition CanopyGenerator.h:90
+
HomogeneousCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:127
+
HomogeneousCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:131
+
HomogeneousCanopyParameters::canopy_extent
helios::vec2 canopy_extent
Horizontal extent of the canopy in the x- and y-directions.
Definition CanopyGenerator.h:102
+
HomogeneousCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:84
+
HomogeneousCanopyParameters::canopy_height
float canopy_height
Height of the canopy.
Definition CanopyGenerator.h:99
+
HomogeneousCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition CanopyGenerator.h:93
+
HomogeneousCanopyParameters::HomogeneousCanopyParameters
HomogeneousCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:51
+
HomogeneousCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition CanopyGenerator.h:87
+
HomogeneousCanopyParameters::leaf_area_index
float leaf_area_index
One-sided leaf area index of the canopy.
Definition CanopyGenerator.h:96
+
SorghumCanopyParameters
Parameters defining Sorghum plant canopy.
Definition CanopyGenerator.h:764
+
SorghumCanopyParameters::s5_stem_subdivisions
int s5_stem_subdivisions
Number of stem radial subdivisions for stage 5.
Definition CanopyGenerator.h:944
+
SorghumCanopyParameters::s2_stem_subdivisions
float s2_stem_subdivisions
Number of stem radial subdivisions for stage 2.
Definition CanopyGenerator.h:833
+
SorghumCanopyParameters::s1_leaf1_angle
float s1_leaf1_angle
Leaf1 vertical angle of rotation for stage 1.
Definition CanopyGenerator.h:810
+
SorghumCanopyParameters::s5_stem_length
float s5_stem_length
Length of the sorghum stem for stage 5.
Definition CanopyGenerator.h:935
+
SorghumCanopyParameters::s4_seed_texture_file
std::string s4_seed_texture_file
Texture map of the panicle for stage 4.
Definition CanopyGenerator.h:915
+
SorghumCanopyParameters::s5_number_of_leaves
int s5_number_of_leaves
Number of leaves for the sorghum plant, stage 5.
Definition CanopyGenerator.h:962
+
SorghumCanopyParameters::s5_mean_leaf_angle
float s5_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 1...
Definition CanopyGenerator.h:965
+
SorghumCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1760
+
SorghumCanopyParameters::s4_stem_length
float s4_stem_length
Length of the sorghum stem for stage 4.
Definition CanopyGenerator.h:900
+
SorghumCanopyParameters::s3_leaf_subdivisions
helios::int2 s3_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
Definition CanopyGenerator.h:886
+
SorghumCanopyParameters::s1_leaf_texture_file
std::string s1_leaf_texture_file
Texture map for sorghum leaf1 for stage 1.
Definition CanopyGenerator.h:822
+
SorghumCanopyParameters::s1_leaf_size2
helios::vec2 s1_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition CanopyGenerator.h:804
+
SorghumCanopyParameters::s4_stem_radius
float s4_stem_radius
Radius of the sorghum stem for stage 4.
Definition CanopyGenerator.h:903
+
SorghumCanopyParameters::s3_mean_leaf_angle
float s3_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is ...
Definition CanopyGenerator.h:892
+
SorghumCanopyParameters::s4_stem_subdivisions
float s4_stem_subdivisions
Number of stem radial subdivisions for stage 4.
Definition CanopyGenerator.h:906
+
SorghumCanopyParameters::s2_leaf1_angle
float s2_leaf1_angle
Leaf1 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:851
+
SorghumCanopyParameters::s2_leaf_texture_file
std::string s2_leaf_texture_file
Texture map for sorghum leaf for stage 2.
Definition CanopyGenerator.h:869
+
SorghumCanopyParameters::s5_panicle_subdivisions
int s5_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
Definition CanopyGenerator.h:950
+
SorghumCanopyParameters::s2_leaf4_angle
float s2_leaf4_angle
Leaf4 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:860
+
SorghumCanopyParameters::s4_mean_leaf_angle
float s4_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5...
Definition CanopyGenerator.h:927
+
SorghumCanopyParameters::s2_leaf5_angle
float s2_leaf5_angle
Leaf5 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:863
+
SorghumCanopyParameters::s2_leaf_subdivisions
helios::int2 s2_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
Definition CanopyGenerator.h:866
+
SorghumCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:972
+
SorghumCanopyParameters::s4_leaf_size
helios::vec2 s4_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
Definition CanopyGenerator.h:918
+
SorghumCanopyParameters::s2_leaf3_angle
float s2_leaf3_angle
Leaf3 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:857
+
SorghumCanopyParameters::s4_leaf_subdivisions
helios::int2 s4_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
Definition CanopyGenerator.h:921
+
SorghumCanopyParameters::s2_stem_radius
float s2_stem_radius
Radius of the sorghum stem for stage 2.
Definition CanopyGenerator.h:830
+
SorghumCanopyParameters::SorghumCanopyParameters
SorghumCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:1310
+
SorghumCanopyParameters::s5_stem_bend
float s5_stem_bend
Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the i...
Definition CanopyGenerator.h:941
+
SorghumCanopyParameters::s1_leaf_size1
helios::vec2 s1_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition CanopyGenerator.h:801
+
SorghumCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1446
+
SorghumCanopyParameters::s5_stem_radius
float s5_stem_radius
Radius of the sorghum stem for stage 5.
Definition CanopyGenerator.h:938
+
SorghumCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:978
+
SorghumCanopyParameters::s3_stem_radius
float s3_stem_radius
Radius of the sorghum stem for stage 3.
Definition CanopyGenerator.h:877
+
SorghumCanopyParameters::s5_leaf_texture_file
std::string s5_leaf_texture_file
Texture map for sorghum leaf, stage 5.
Definition CanopyGenerator.h:968
+
SorghumCanopyParameters::s5_leaf_subdivisions
helios::int2 s5_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
Definition CanopyGenerator.h:959
+
SorghumCanopyParameters::s1_leaf_size3
helios::vec2 s1_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition CanopyGenerator.h:807
+
SorghumCanopyParameters::s4_number_of_leaves
int s4_number_of_leaves
Number of leaves for the sorghum plant, stage 4.
Definition CanopyGenerator.h:924
+
SorghumCanopyParameters::s4_panicle_subdivisions
int s4_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
Definition CanopyGenerator.h:912
+
SorghumCanopyParameters::s3_stem_length
float s3_stem_length
Length of the sorghum stem for stage 3.
Definition CanopyGenerator.h:874
+
SorghumCanopyParameters::s3_leaf_texture_file
std::string s3_leaf_texture_file
Texture map for sorghum leaf for stage 3.
Definition CanopyGenerator.h:895
+
SorghumCanopyParameters::s2_leaf_size3
helios::vec2 s2_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:842
+
SorghumCanopyParameters::s1_stem_radius
float s1_stem_radius
Radius of the sorghum stem for stage 1.
Definition CanopyGenerator.h:795
+
SorghumCanopyParameters::s5_panicle_size
helios::vec2 s5_panicle_size
Size of panicle in x- and y- directions for stage 5.
Definition CanopyGenerator.h:947
+
SorghumCanopyParameters::s3_number_of_leaves
int s3_number_of_leaves
Number of leaves along the stem for stage 3.
Definition CanopyGenerator.h:889
+
SorghumCanopyParameters::s2_leaf_size5
helios::vec2 s2_leaf_size5
Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:848
+
SorghumCanopyParameters::s5_leaf_size
helios::vec2 s5_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
Definition CanopyGenerator.h:956
+
SorghumCanopyParameters::s1_stem_subdivisions
float s1_stem_subdivisions
Number of stem radial subdivisions for stage 1.
Definition CanopyGenerator.h:798
+
SorghumCanopyParameters::s2_leaf_size4
helios::vec2 s2_leaf_size4
Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:845
+
SorghumCanopyParameters::s1_leaf_subdivisions
helios::int2 s1_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
Definition CanopyGenerator.h:819
+
SorghumCanopyParameters::s4_leaf_texture_file
std::string s4_leaf_texture_file
Texture map for sorghum leaf, stage 4.
Definition CanopyGenerator.h:930
+
SorghumCanopyParameters::s2_leaf_size2
helios::vec2 s2_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:839
+
SorghumCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:975
+
SorghumCanopyParameters::s3_leaf_size
helios::vec2 s3_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
Definition CanopyGenerator.h:883
+
SorghumCanopyParameters::s2_stem_length
float s2_stem_length
Length of the sorghum stem for stage 2.
Definition CanopyGenerator.h:827
+
SorghumCanopyParameters::s1_leaf2_angle
float s1_leaf2_angle
Leaf2 vertical angle of rotation for stage 1.
Definition CanopyGenerator.h:813
+
SorghumCanopyParameters::s3_stem_subdivisions
float s3_stem_subdivisions
Number of stem radial subdivisions for stage 3.
Definition CanopyGenerator.h:880
+
SorghumCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1764
+
SorghumCanopyParameters::s1_stem_length
float s1_stem_length
Length of the sorghum stem for stage 1.
Definition CanopyGenerator.h:792
+
SorghumCanopyParameters::sorghum_stage
int sorghum_stage
Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation ...
Definition CanopyGenerator.h:787
+
SorghumCanopyParameters::s1_leaf3_angle
float s1_leaf3_angle
Leaf3 vertical angle of rotation for stage 1.
Definition CanopyGenerator.h:816
+
SorghumCanopyParameters::s2_leaf_size1
helios::vec2 s2_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:836
+
SorghumCanopyParameters::s5_seed_texture_file
std::string s5_seed_texture_file
Texture map of the panicle for stage 5.
Definition CanopyGenerator.h:953
+
SorghumCanopyParameters::s4_panicle_size
helios::vec2 s4_panicle_size
Size of panicle in x- and y- directions for stage 4.
Definition CanopyGenerator.h:909
+
SorghumCanopyParameters::s2_leaf2_angle
float s2_leaf2_angle
Leaf2 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:854
+
SphericalCrownsCanopyParameters
Parameters defining the canopy with spherical crowns.
Definition CanopyGenerator.h:113
+
SphericalCrownsCanopyParameters::crown_radius
helios::vec3 crown_radius
Radius of the spherical crowns.
Definition CanopyGenerator.h:154
+
SphericalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition CanopyGenerator.h:136
+
SphericalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition CanopyGenerator.h:142
+
SphericalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition CanopyGenerator.h:145
+
SphericalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:163
+
SphericalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition CanopyGenerator.h:160
+
SphericalCrownsCanopyParameters::SphericalCrownsCanopyParameters
SphericalCrownsCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:135
+
SphericalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:139
+
SphericalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition CanopyGenerator.h:148
+
SphericalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition CanopyGenerator.h:151
+
SphericalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition CanopyGenerator.h:157
+
SphericalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:161
+
SphericalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:229
+
SphericalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:225
+
SplitGrapevineParameters
Parameters defining the grapevine canopy with a split (quad) trellis.
Definition CanopyGenerator.h:398
+
SplitGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:740
+
SplitGrapevineParameters::shoot_angle_base_spread
float shoot_angle_base_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition CanopyGenerator.h:428
+
SplitGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:717
+
SplitGrapevineParameters::shoot_angle_base
float shoot_angle_base
Average angle of the shoot at the base (shoot_angle_base=0 points shoots upward; shoot_angle_base=M_P...
Definition CanopyGenerator.h:426
+
SplitGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:736
+
SplitGrapevineParameters::SplitGrapevineParameters
SplitGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:670
+
SplitGrapevineParameters::cordon_spacing
float cordon_spacing
Spacing between two opposite cordons.
Definition CanopyGenerator.h:421
+
SplitGrapevineParameters::cordon_spacing_spread
float cordon_spacing_spread
Spread value for the cordon spacing. With any new canopy or plant generation, the cordon spacing woul...
Definition CanopyGenerator.h:423
+
SplitGrapevineParameters::shoot_angle_tip_spread
float shoot_angle_tip_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition CanopyGenerator.h:433
+
SplitGrapevineParameters::shoot_angle_tip
float shoot_angle_tip
Average angle of the shoot at the tip (shoot_angle=0 is a completely vertical shoot; shoot_angle=M_PI...
Definition CanopyGenerator.h:431
+
StrawberryParameters
Parameters defining the strawberry plant canopy.
Definition CanopyGenerator.h:626
+
StrawberryParameters::stem_subdivisions
int stem_subdivisions
Number of radial subdivisions for stem tubes.
Definition CanopyGenerator.h:661
+
StrawberryParameters::stems_per_plant
int stems_per_plant
Number of stems per plant.
Definition CanopyGenerator.h:664
+
StrawberryParameters::fruit_radius
float fruit_radius
Radius of strawberry fruit.
Definition CanopyGenerator.h:682
+
StrawberryParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:670
+
StrawberryParameters::StrawberryParameters
StrawberryParameters()
Default constructor.
Definition CanopyGenerator.cpp:1081
+
StrawberryParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition CanopyGenerator.h:688
+
StrawberryParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:679
+
StrawberryParameters::plant_height
float plant_height
Height of the plant.
Definition CanopyGenerator.h:676
+
StrawberryParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1119
+
StrawberryParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1193
+
StrawberryParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:652
+
StrawberryParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1197
+
StrawberryParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for strawberry fruit.
Definition CanopyGenerator.h:685
+
StrawberryParameters::clusters_per_stem
float clusters_per_stem
Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
Definition CanopyGenerator.h:691
+
StrawberryParameters::stem_radius
float stem_radius
Radius of stems.
Definition CanopyGenerator.h:667
+
StrawberryParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:655
+
StrawberryParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:673
+
StrawberryParameters::stem_color
helios::RGBcolor stem_color
Color of stems.
Definition CanopyGenerator.h:658
+
StrawberryParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:649
+
TomatoParameters
Parameters defining the tomato plant canopy.
Definition CanopyGenerator.h:565
+
TomatoParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition CanopyGenerator.h:600
+
TomatoParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1073
+
TomatoParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:588
+
TomatoParameters::fruit_color
helios::RGBcolor fruit_color
Color of tomato fruit.
Definition CanopyGenerator.h:618
+
TomatoParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:591
+
TomatoParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:612
+
TomatoParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition CanopyGenerator.h:621
+
TomatoParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition CanopyGenerator.h:597
+
TomatoParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:606
+
TomatoParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1008
+
TomatoParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:603
+
TomatoParameters::TomatoParameters
TomatoParameters()
Default constructor.
Definition CanopyGenerator.cpp:976
+
TomatoParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:594
+
TomatoParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1077
+
TomatoParameters::plant_height
float plant_height
Height of the plant.
Definition CanopyGenerator.h:609
+
TomatoParameters::fruit_radius
float fruit_radius
Radius of tomato fruit.
Definition CanopyGenerator.h:615
+
UnilateralGrapevineParameters
Parameters defining the grapevine canopy with unilateral trellis.
Definition CanopyGenerator.h:438
+
UnilateralGrapevineParameters::UnilateralGrapevineParameters
UnilateralGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:744
+
UnilateralGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:786
+
UnilateralGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:782
+
UnilateralGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:790
+
VSPGrapevineParameters
Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis.
Definition CanopyGenerator.h:373
+
VSPGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:658
+
VSPGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:662
+
VSPGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:666
+
VSPGrapevineParameters::VSPGrapevineParameters
VSPGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:620
+
WalnutCanopyParameters
Parameters defining the walnut tree canopy.
Definition CanopyGenerator.h:696
+
WalnutCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:759
+
WalnutCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for branch tubes.
Definition CanopyGenerator.h:731
+
WalnutCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:744
+
WalnutCanopyParameters::WalnutCanopyParameters
WalnutCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:1201
+
WalnutCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1302
+
WalnutCanopyParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for walnut fruit.
Definition CanopyGenerator.h:753
+
WalnutCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:722
+
WalnutCanopyParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition CanopyGenerator.h:756
+
WalnutCanopyParameters::trunk_radius
float trunk_radius
Radius of trunk.
Definition CanopyGenerator.h:734
+
WalnutCanopyParameters::fruit_radius
float fruit_radius
Radius of walnuts.
Definition CanopyGenerator.h:750
+
WalnutCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:725
+
WalnutCanopyParameters::leaf_length
float leaf_length
Maximum length of leaves along midrib.
Definition CanopyGenerator.h:719
+
WalnutCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1237
+
WalnutCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for wood/branches.
Definition CanopyGenerator.h:728
+
WalnutCanopyParameters::branch_length
helios::vec3 branch_length
Average length of branches in each recursive branch level. For example, the first (....
Definition CanopyGenerator.h:740
+
WalnutCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1306
+
WalnutCanopyParameters::trunk_height
float trunk_height
Height of the trunk.
Definition CanopyGenerator.h:737
+
WalnutCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:747
+
WhiteSpruceCanopyParameters
Parameters defining the white spruce.
Definition CanopyGenerator.h:489
+
WhiteSpruceCanopyParameters::needle_width
float needle_width
Width of needles.
Definition CanopyGenerator.h:512
+
WhiteSpruceCanopyParameters::needle_subdivisions
helios::int2 needle_subdivisions
Number of sub-division segments per needle.
Definition CanopyGenerator.h:518
+
WhiteSpruceCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:884
+
WhiteSpruceCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:972
+
WhiteSpruceCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition CanopyGenerator.h:524
+
WhiteSpruceCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition CanopyGenerator.h:557
+
WhiteSpruceCanopyParameters::needle_length
float needle_length
Length of needles.
Definition CanopyGenerator.h:515
+
WhiteSpruceCanopyParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition CanopyGenerator.h:530
+
WhiteSpruceCanopyParameters::level_spacing
float level_spacing
Vertical spacing between branching levels.
Definition CanopyGenerator.h:545
+
WhiteSpruceCanopyParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition CanopyGenerator.h:542
+
WhiteSpruceCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition CanopyGenerator.h:527
+
WhiteSpruceCanopyParameters::shoot_angle
float shoot_angle
Maximum shoot angle.
Definition CanopyGenerator.h:551
+
WhiteSpruceCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:560
+
WhiteSpruceCanopyParameters::base_height
float base_height
Height at which branches start.
Definition CanopyGenerator.h:536
+
WhiteSpruceCanopyParameters::crown_radius
float crown_radius
Radius of the crown at the base.
Definition CanopyGenerator.h:539
+
WhiteSpruceCanopyParameters::needle_color
helios::RGBcolor needle_color
Color of needles.
Definition CanopyGenerator.h:521
+
WhiteSpruceCanopyParameters::trunk_radius
float trunk_radius
Radius of the trunk at the base.
Definition CanopyGenerator.h:533
+
WhiteSpruceCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:968
+
WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters
WhiteSpruceCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:842
+
WhiteSpruceCanopyParameters::branches_per_level
int branches_per_level
Number of primary branches on the bottom level.
Definition CanopyGenerator.h:548
+
WhiteSpruceCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition CanopyGenerator.h:554
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBAcolor::r
float r
Red color component.
Definition helios_vector_types.h:1029
+
helios::RGBAcolor::a
float a
Alpha (transparency) component.
Definition helios_vector_types.h:1038
+
helios::RGBAcolor::b
float b
Blue color component.
Definition helios_vector_types.h:1035
+
helios::RGBAcolor::g
float g
Green color component.
Definition helios_vector_types.h:1032
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_canopy_generator_8h.html b/doc/html/_canopy_generator_8h.html index e2e895e8a..1d1c75d5c 100644 --- a/doc/html/_canopy_generator_8h.html +++ b/doc/html/_canopy_generator_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | @@ -151,22 +163,22 @@ - + - + - + - + - + - +

Functions

float getVariation (float V, std::minstd_rand0 &generator, bool positive=false)
float getVariation (float V, std::minstd_rand0 &generator, bool positive=false)
 Draw a random number (float) from a uniform distribution between -V and V.
 
int getVariation (int V, std::minstd_rand0 &generator, bool positive=false)
int getVariation (int V, std::minstd_rand0 &generator, bool positive=false)
 Draw a random number (int) from a uniform distribution between -V and V.
 
uint getVariation (uint V, std::minstd_rand0 &generator)
uint getVariation (uint V, std::minstd_rand0 &generator)
 Draw a random number (uint) from a uniform distribution between 0 and V.
 
helios::vec3 interpolateTube (const std::vector< helios::vec3 > &P, float frac)
helios::vec3 interpolateTube (const std::vector< helios::vec3 > &P, float frac)
 Interpolate the position of a point along a tube.
 
float interpolateTube (const std::vector< float > &P, float frac)
float interpolateTube (const std::vector< float > &P, float frac)
 Interpolate the radius of a point along a tube.
 
float evaluateCDFresid (float thetaL, std::vector< float > &ru_v, const void *a_distribution)
float evaluateCDFresid (float thetaL, std::vector< float > &ru_v, const void *a_distribution)
 Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf angle.
 
@@ -187,25 +199,17 @@

float evaluateCDFresid ( - float  - thetaL, + float thetaL, - std::vector< float > &  - ru_v, + std::vector< float > & ru_v, - const void *  - a_distribution  - - - - ) - + const void * a_distribution )

@@ -233,25 +237,17 @@

float getVariation ( - float  - V, + float V, - std::minstd_rand0 &  - generator, + std::minstd_rand0 & generator, - bool  - positive = false  - - - - ) - + bool positive = false )

@@ -279,25 +275,17 @@

int getVariation ( - int  - V, + int V, - std::minstd_rand0 &  - generator, + std::minstd_rand0 & generator, - bool  - positive = false  - - - - ) - + bool positive = false )

@@ -325,19 +313,12 @@

uint getVariation ( - uint  - V, + uint V, - std::minstd_rand0 &  - generator  - - - - ) - + std::minstd_rand0 & generator )

@@ -364,19 +345,12 @@

float interpolateTube ( - const std::vector< float > &  - P, + const std::vector< float > & P, - float  - frac  - - - - ) - + float frac )

@@ -403,19 +377,12 @@

helios::vec3 interpolateTube ( - const std::vector< helios::vec3 > &  - P, + const std::vector< helios::vec3 > & P, - float  - frac  - - - - ) - + float frac )

@@ -436,7 +403,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_canopy_generator_8h_source.html b/doc/html/_canopy_generator_8h_source.html index 62f6cb7e1..19d1d5ad5 100644 --- a/doc/html/_canopy_generator_8h_source.html +++ b/doc/html/_canopy_generator_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
CanopyGenerator.h
@@ -101,6 +113,7 @@
21
22class CanopyGenerator;
23
+
25struct BaseCanopyParameters{
26
28 BaseCanopyParameters();
@@ -121,7 +134,9 @@
53 float canopy_rotation;
54
55};
+
56
+
58struct HomogeneousCanopyParameters : BaseCanopyParameters{
59
61 HomogeneousCanopyParameters();
@@ -156,7 +171,9 @@
108 std::string buffer;
109
110};
+
111
+
113struct SphericalCrownsCanopyParameters : BaseCanopyParameters{
114
116 SphericalCrownsCanopyParameters();
@@ -193,7 +210,9 @@
166 std::vector<float> leaf_angle_PDF;
167
168};
+
169
+
171struct ConicalCrownsCanopyParameters : BaseCanopyParameters{
172
174 ConicalCrownsCanopyParameters();
@@ -232,7 +251,9 @@
227 std::vector<float> leaf_angle_PDF;
228
229};
+
230
+
371
+
373struct VSPGrapevineParameters : BaseGrapeVineParameters{
374
376 VSPGrapevineParameters();
@@ -334,7 +357,9 @@
393 void buildCanopy(CanopyGenerator& canopy_generator) override;
394
395};
+
396
+
436
+
438struct UnilateralGrapevineParameters : BaseGrapeVineParameters{
439
441 UnilateralGrapevineParameters();
@@ -373,8 +400,10 @@
458 void buildCanopy(CanopyGenerator& canopy_generator) override;
459
460};
+
461
462
+
464struct GobletGrapevineParameters : BaseGrapeVineParameters{
465
467 GobletGrapevineParameters();
@@ -389,7 +418,9 @@
484 void buildCanopy(CanopyGenerator& canopy_generator) override;
485
486};
+
487
+
563
+
565struct TomatoParameters : BaseCanopyParameters{
566
568 TomatoParameters();
@@ -477,7 +510,9 @@
621 uint fruit_subdivisions;
622
623};
+
624
+
626struct StrawberryParameters : BaseCanopyParameters{
627
629 StrawberryParameters();
@@ -522,7 +557,9 @@
691 float clusters_per_stem;
692
693};
+
694
+
762
+
764struct SorghumCanopyParameters : BaseCanopyParameters{
765
767 SorghumCanopyParameters();
@@ -707,14 +746,16 @@
968 std::string s5_leaf_texture_file;
969
970 // CANOPY
-
972 float plant_spacing;
+
972 float plant_spacing;
973
975 float row_spacing;
976
978 helios::int2 plant_count;
979
980};
+
981
+
983struct BeanParameters : BaseCanopyParameters{
984
986 BeanParameters();
@@ -759,12 +800,14 @@
1048 uint pod_subdivisions;
1049
1050};
+
1051
+
1052class CanopyGenerator{
1053 public:
1054
1056
-
1059 explicit CanopyGenerator( helios::Context* context );
+
1059 explicit CanopyGenerator( helios::Context* context );
1060
1062 int selfTest();
1063
@@ -940,6 +983,7 @@
1399 void cleanDeletedUUIDs( std::vector<std::vector<std::vector<uint> > > &UUIDs );
1400
1401};
+
1402
1404
1409float getVariation( float V, std::minstd_rand0& generator, bool positive = false );
@@ -960,339 +1004,341 @@
1446float evaluateCDFresid(float thetaL, std::vector<float> &ru_v, const void *a_distribution);
1447
1448#endif //CANOPY_GENERATOR
-
evaluateCDFresid
float evaluateCDFresid(float thetaL, std::vector< float > &ru_v, const void *a_distribution)
Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf ...
Definition: CanopyGenerator.cpp:3321
-
interpolateTube
helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition: CanopyGenerator.cpp:3251
-
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
Draw a random number (float) from a uniform distribution between -V and V.
Definition: CanopyGenerator.cpp:3004
+
evaluateCDFresid
float evaluateCDFresid(float thetaL, std::vector< float > &ru_v, const void *a_distribution)
Evaluate the error between a predicted and actual leaf angle cumulative distribution at a given leaf ...
Definition CanopyGenerator.cpp:3321
+
interpolateTube
helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition CanopyGenerator.cpp:3251
+
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
Draw a random number (float) from a uniform distribution between -V and V.
Definition CanopyGenerator.cpp:3004
- -
CanopyGenerator::whitespruce
uint whitespruce(const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual white spruce tree.
Definition: whitespruce.cpp:6
-
CanopyGenerator::buildCanopy
void buildCanopy(const HomogeneousCanopyParameters &params)
Build a canopy consisting of a homogeneous volume of leaves.
Definition: CanopyGenerator.cpp:2340
-
CanopyGenerator::storeCanopyParameters
void storeCanopyParameters(Args &&... args)
Stores the given canopy parameters.
Definition: CanopyGenerator.cpp:2055
-
CanopyGenerator::sorghum
uint sorghum(const SorghumCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual sorghum plant.
Definition: sorghum.cpp:8
-
CanopyGenerator::enableMessages
void enableMessages()
Enable standard messages to be printed to screen (default is to enable messages)
Definition: CanopyGenerator.cpp:3234
-
CanopyGenerator::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs()
Get the unique universal identifiers (UUIDs) for all trunk primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3117
-
CanopyGenerator::tomato
uint tomato(const TomatoParameters &params, const helios::vec3 &origin)
Function to add an individual tomato plant.
Definition: tomato.cpp:139
-
CanopyGenerator::buildGround
void buildGround(const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file)
Build a ground consisting of texture sub-tiles and sub-patches, which can be different sizes.
Definition: CanopyGenerator.cpp:2296
-
CanopyGenerator::strawberry
uint strawberry(const StrawberryParameters &params, const helios::vec3 &origin)
Function to add an individual strawberry plant.
Definition: strawberry.cpp:215
-
CanopyGenerator::addGrapeCluster
std::vector< std::vector< uint > > addGrapeCluster(helios::vec3 position, float grape_rad, float cluster_rad, helios::RGBcolor grape_color, uint grape_subdiv)
Function to add an individual grape berry cluster.
Definition: grapevine.cpp:21
-
CanopyGenerator::getGroundUUIDs
std::vector< uint > getGroundUUIDs()
Get the unique universal identifiers (UUIDs) for the primitives that make up the ground.
Definition: CanopyGenerator.cpp:3180
-
CanopyGenerator::getLeafUUIDs
std::vector< uint > getLeafUUIDs()
Get the unique universal identifiers (UUIDs) for all leaf primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3150
-
CanopyGenerator::getBranchUUIDs
std::vector< uint > getBranchUUIDs()
Get the unique universal identifiers (UUIDs) for all branch primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3134
-
CanopyGenerator::buildCanopies
void buildCanopies()
Builds canopies for all the stored canopy parameters.
Definition: CanopyGenerator.cpp:2334
-
CanopyGenerator::grapevineSplit
uint grapevineSplit(const SplitGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a split trellis.
Definition: grapevine.cpp:464
-
CanopyGenerator::getAllUUIDs
std::vector< uint > getAllUUIDs(uint PlantID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition: CanopyGenerator.cpp:3196
-
CanopyGenerator::grapevineGoblet
uint grapevineGoblet(const GobletGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a goblet (vent a taille) trellis.
Definition: grapevine.cpp:1065
-
CanopyGenerator::disableElementLabels
void disableElementLabels()
Toggle off primitive data element type labels.
Definition: CanopyGenerator.cpp:3375
-
CanopyGenerator::loadXML
void loadXML(const char *filename, bool build=true)
Reads the XML file of the given name and stores all the configured canopy parameters.
Definition: CanopyGenerator.cpp:2068
-
CanopyGenerator::grapevineUnilateral
uint grapevineUnilateral(const UnilateralGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a unilateral trellis.
Definition: grapevine.cpp:830
-
CanopyGenerator::disableMessages
void disableMessages()
Disable standard messages from being printed to screen (default is to enable messages)
Definition: CanopyGenerator.cpp:3230
-
CanopyGenerator::grapevineVSP
uint grapevineVSP(const VSPGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a vertical shoot positioned (VSP) trellis.
Definition: grapevine.cpp:150
-
CanopyGenerator::getPlantCount
uint getPlantCount()
Get the current number of plants added to the Canopy Generator.
Definition: CanopyGenerator.cpp:3222
-
CanopyGenerator::getFruitUUIDs
std::vector< uint > getFruitUUIDs()
Get the unique universal identifiers (UUIDs) for all fruit primitives in a single 1D vector.
Definition: CanopyGenerator.cpp:3167
-
CanopyGenerator::seedRandomGenerator
void seedRandomGenerator(uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition: CanopyGenerator.cpp:3226
-
CanopyGenerator::bean
uint bean(const BeanParameters &params, const helios::vec3 &origin)
Function to add an individual bean plant.
Definition: bean.cpp:291
-
CanopyGenerator::buildIndividualPlants
void buildIndividualPlants()
Builds individual plants based on the stored canopy parameters (using canopy_origin as the position)
Definition: CanopyGenerator.cpp:3244
-
CanopyGenerator::createElementLabels
void createElementLabels()
Create primitive data that explicitly labels all primitives according to the plant element they corre...
Definition: CanopyGenerator.cpp:3371
-
CanopyGenerator::selfTest
int selfTest()
Unit testing routine.
Definition: CanopyGenerator.cpp:1907
-
CanopyGenerator::walnut
uint walnut(const WalnutCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual walnut tree.
Definition: walnut.cpp:333
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
BaseCanopyParameters
Base struct class for Canopy parameters.
Definition: CanopyGenerator.h:25
-
BaseCanopyParameters::canopy_origin
helios::vec3 canopy_origin
Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places th...
Definition: CanopyGenerator.h:50
-
BaseCanopyParameters::BaseCanopyParameters
BaseCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:28
+ +
CanopyGenerator::whitespruce
uint whitespruce(const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual white spruce tree.
Definition whitespruce.cpp:6
+
CanopyGenerator::buildCanopy
void buildCanopy(const HomogeneousCanopyParameters &params)
Build a canopy consisting of a homogeneous volume of leaves.
Definition CanopyGenerator.cpp:2340
+
CanopyGenerator::storeCanopyParameters
void storeCanopyParameters(Args &&... args)
Stores the given canopy parameters.
Definition CanopyGenerator.cpp:2055
+
CanopyGenerator::sorghum
uint sorghum(const SorghumCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual sorghum plant.
Definition sorghum.cpp:8
+
CanopyGenerator::enableMessages
void enableMessages()
Enable standard messages to be printed to screen (default is to enable messages)
Definition CanopyGenerator.cpp:3234
+
CanopyGenerator::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs()
Get the unique universal identifiers (UUIDs) for all trunk primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3117
+
CanopyGenerator::tomato
uint tomato(const TomatoParameters &params, const helios::vec3 &origin)
Function to add an individual tomato plant.
Definition tomato.cpp:139
+
CanopyGenerator::buildGround
void buildGround(const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file)
Build a ground consisting of texture sub-tiles and sub-patches, which can be different sizes.
Definition CanopyGenerator.cpp:2296
+
CanopyGenerator::strawberry
uint strawberry(const StrawberryParameters &params, const helios::vec3 &origin)
Function to add an individual strawberry plant.
Definition strawberry.cpp:215
+
CanopyGenerator::addGrapeCluster
std::vector< std::vector< uint > > addGrapeCluster(helios::vec3 position, float grape_rad, float cluster_rad, helios::RGBcolor grape_color, uint grape_subdiv)
Function to add an individual grape berry cluster.
Definition grapevine.cpp:21
+
CanopyGenerator::getGroundUUIDs
std::vector< uint > getGroundUUIDs()
Get the unique universal identifiers (UUIDs) for the primitives that make up the ground.
Definition CanopyGenerator.cpp:3180
+
CanopyGenerator::getLeafUUIDs
std::vector< uint > getLeafUUIDs()
Get the unique universal identifiers (UUIDs) for all leaf primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3150
+
CanopyGenerator::getBranchUUIDs
std::vector< uint > getBranchUUIDs()
Get the unique universal identifiers (UUIDs) for all branch primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3134
+
CanopyGenerator::buildCanopies
void buildCanopies()
Builds canopies for all the stored canopy parameters.
Definition CanopyGenerator.cpp:2334
+
CanopyGenerator::grapevineSplit
uint grapevineSplit(const SplitGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a split trellis.
Definition grapevine.cpp:464
+
CanopyGenerator::getAllUUIDs
std::vector< uint > getAllUUIDs(uint PlantID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition CanopyGenerator.cpp:3196
+
CanopyGenerator::grapevineGoblet
uint grapevineGoblet(const GobletGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a goblet (vent a taille) trellis.
Definition grapevine.cpp:1065
+
CanopyGenerator::disableElementLabels
void disableElementLabels()
Toggle off primitive data element type labels.
Definition CanopyGenerator.cpp:3375
+
CanopyGenerator::loadXML
void loadXML(const char *filename, bool build=true)
Reads the XML file of the given name and stores all the configured canopy parameters.
Definition CanopyGenerator.cpp:2068
+
CanopyGenerator::grapevineUnilateral
uint grapevineUnilateral(const UnilateralGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a unilateral trellis.
Definition grapevine.cpp:830
+
CanopyGenerator::disableMessages
void disableMessages()
Disable standard messages from being printed to screen (default is to enable messages)
Definition CanopyGenerator.cpp:3230
+
CanopyGenerator::grapevineVSP
uint grapevineVSP(const VSPGrapevineParameters &params, const helios::vec3 &origin)
Function to add an individual grapevine plant on a vertical shoot positioned (VSP) trellis.
Definition grapevine.cpp:150
+
CanopyGenerator::getPlantCount
uint getPlantCount()
Get the current number of plants added to the Canopy Generator.
Definition CanopyGenerator.cpp:3222
+
CanopyGenerator::getFruitUUIDs
std::vector< uint > getFruitUUIDs()
Get the unique universal identifiers (UUIDs) for all fruit primitives in a single 1D vector.
Definition CanopyGenerator.cpp:3167
+
CanopyGenerator::CanopyGenerator
CanopyGenerator(helios::Context *context)
Canopy geometry generator constructor.
Definition CanopyGenerator.cpp:1893
+
CanopyGenerator::seedRandomGenerator
void seedRandomGenerator(uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition CanopyGenerator.cpp:3226
+
CanopyGenerator::bean
uint bean(const BeanParameters &params, const helios::vec3 &origin)
Function to add an individual bean plant.
Definition bean.cpp:291
+
CanopyGenerator::buildIndividualPlants
void buildIndividualPlants()
Builds individual plants based on the stored canopy parameters (using canopy_origin as the position)
Definition CanopyGenerator.cpp:3244
+
CanopyGenerator::createElementLabels
void createElementLabels()
Create primitive data that explicitly labels all primitives according to the plant element they corre...
Definition CanopyGenerator.cpp:3371
+
CanopyGenerator::selfTest
int selfTest()
Unit testing routine.
Definition CanopyGenerator.cpp:1907
+
CanopyGenerator::walnut
uint walnut(const WalnutCanopyParameters &params, const helios::vec3 &origin)
Function to add an individual walnut tree.
Definition walnut.cpp:333
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
BaseCanopyParameters
Base struct class for Canopy parameters.
Definition CanopyGenerator.h:25
+
BaseCanopyParameters::canopy_origin
helios::vec3 canopy_origin
Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places th...
Definition CanopyGenerator.h:50
+
BaseCanopyParameters::BaseCanopyParameters
BaseCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:28
BaseCanopyParameters::buildCanopy
virtual void buildCanopy(CanopyGenerator &canopy_generator)=0
Makes the given Canopy generator build a canopy of our type with our parameters.
-
BaseCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:37
-
BaseCanopyParameters::canopy_rotation
float canopy_rotation
Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal t...
Definition: CanopyGenerator.h:53
+
BaseCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:37
+
BaseCanopyParameters::canopy_rotation
float canopy_rotation
Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal t...
Definition CanopyGenerator.h:53
BaseCanopyParameters::buildPlant
virtual void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin)=0
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
- -
BaseGrapeVineParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:284
-
BaseGrapeVineParameters::shoot_radius_spread
float shoot_radius_spread
Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be...
Definition: CanopyGenerator.h:326
-
BaseGrapeVineParameters::missing_plant_probability
float missing_plant_probability
Probability for a plant to be missing.
Definition: CanopyGenerator.h:281
-
BaseGrapeVineParameters::dead_probability
float dead_probability
Probability for a plant to be dead, i.e. without any leaves or grapes.
Definition: CanopyGenerator.h:275
-
BaseGrapeVineParameters::cluster_radius
float cluster_radius
Maximum horizontal radius of grape clusters.
Definition: CanopyGenerator.h:347
-
BaseGrapeVineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:392
-
BaseGrapeVineParameters::cluster_height_max
float cluster_height_max
Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
Definition: CanopyGenerator.h:352
-
BaseGrapeVineParameters::BaseGrapeVineParameters
BaseGrapeVineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:339
-
BaseGrapeVineParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:264
-
BaseGrapeVineParameters::leaf_spacing_fraction_spread
float leaf_spacing_fraction_spread
Spread value for the leaf spacing fraction. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:336
-
BaseGrapeVineParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition: CanopyGenerator.h:270
-
BaseGrapeVineParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:289
-
BaseGrapeVineParameters::grape_subdivisions
uint grape_subdivisions
Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subd...
Definition: CanopyGenerator.h:360
-
BaseGrapeVineParameters::plant_spacing_spread
float plant_spacing_spread
Spread value for the plant spacing. The spacing between adjacent plants along a row would vary betwee...
Definition: CanopyGenerator.h:286
-
BaseGrapeVineParameters::shoot_length_spread
float shoot_length_spread
Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be...
Definition: CanopyGenerator.h:321
-
BaseGrapeVineParameters::leaf_spacing_fraction
float leaf_spacing_fraction
Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = ...
Definition: CanopyGenerator.h:334
-
BaseGrapeVineParameters::trunk_height_spread
float trunk_height_spread
Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be...
Definition: CanopyGenerator.h:296
-
BaseGrapeVineParameters::shoots_per_cordon_spread
uint shoots_per_cordon_spread
Spread value for the number of shoots per cordon. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:331
-
BaseGrapeVineParameters::cordon_radius
float cordon_radius
Radius of cordon branches.
Definition: CanopyGenerator.h:314
-
BaseGrapeVineParameters::trunk_radius_spread
float trunk_radius_spread
Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be...
Definition: CanopyGenerator.h:301
-
BaseGrapeVineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:612
-
BaseGrapeVineParameters::leaf_width
float leaf_width
Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is th...
Definition: CanopyGenerator.h:256
-
BaseGrapeVineParameters::cordon_height_spread
float cordon_height_spread
Spread value for the cordon height. With any new canopy or plant generation, the cordon height would ...
Definition: CanopyGenerator.h:311
-
BaseGrapeVineParameters::canopy_rotation_spread
float canopy_rotation_spread
Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotat...
Definition: CanopyGenerator.h:368
-
BaseGrapeVineParameters::wood_subdivisions_spread
int wood_subdivisions_spread
Spread value for the number of wood subdivisions. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:272
-
BaseGrapeVineParameters::shoots_per_cordon
uint shoots_per_cordon
Number of shoots on each cordon.
Definition: CanopyGenerator.h:329
-
BaseGrapeVineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:616
-
BaseGrapeVineParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition: CanopyGenerator.h:294
-
BaseGrapeVineParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:261
-
BaseGrapeVineParameters::shoot_length
float shoot_length
Length of shoots.
Definition: CanopyGenerator.h:319
-
BaseGrapeVineParameters::cluster_height_max_spread
float cluster_height_max_spread
Spread value for the cluster height. With any new canopy or plant generation, the cluster height woul...
Definition: CanopyGenerator.h:354
-
BaseGrapeVineParameters::grape_subdivisions_spread
uint grape_subdivisions_spread
Spread value for the number of grape subdivisions. With any new canopy or plant generation,...
Definition: CanopyGenerator.h:362
-
BaseGrapeVineParameters::trunk_radius
float trunk_radius
Radius of the trunk at the widest point.
Definition: CanopyGenerator.h:299
-
BaseGrapeVineParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition: CanopyGenerator.h:324
-
BaseGrapeVineParameters::cordon_length
float cordon_length
Length of the cordons. By default, half the plant spacing.
Definition: CanopyGenerator.h:304
-
BaseGrapeVineParameters::cluster_radius_spread
float cluster_radius_spread
Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius woul...
Definition: CanopyGenerator.h:349
-
BaseGrapeVineParameters::grape_color
helios::RGBcolor grape_color
Color of grapes.
Definition: CanopyGenerator.h:357
-
BaseGrapeVineParameters::cordon_radius_spread
float cordon_radius_spread
Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would ...
Definition: CanopyGenerator.h:316
-
BaseGrapeVineParameters::leaf_width_spread
float leaf_width_spread
Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf wi...
Definition: CanopyGenerator.h:258
-
BaseGrapeVineParameters::grape_radius_spread
float grape_radius_spread
Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be...
Definition: CanopyGenerator.h:344
-
BaseGrapeVineParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:339
-
BaseGrapeVineParameters::row_spacing_spread
float row_spacing_spread
Spread value for the row spacing. This allows to vary the alignment of plants along a row....
Definition: CanopyGenerator.h:291
-
BaseGrapeVineParameters::cordon_height
float cordon_height
Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
Definition: CanopyGenerator.h:309
-
BaseGrapeVineParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition: CanopyGenerator.h:267
-
BaseGrapeVineParameters::grape_radius
float grape_radius
Radius of grape berries.
Definition: CanopyGenerator.h:342
-
BaseGrapeVineParameters::cordon_length_spread
float cordon_length_spread
Spread value for the cordon length. With any new canopy or plant generation, the cordon length would ...
Definition: CanopyGenerator.h:306
-
BeanParameters
Parameters defining the bean plant canopy.
Definition: CanopyGenerator.h:983
-
BeanParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:1030
-
BeanParameters::leaflet_length
float leaflet_length
Length of the leaflet from base to tip leaf.
Definition: CanopyGenerator.h:1027
-
BeanParameters::pod_length
float pod_length
Length of bean pods.
Definition: CanopyGenerator.h:1042
-
BeanParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:1006
-
BeanParameters::BeanParameters
BeanParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1768
-
BeanParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition: CanopyGenerator.h:1018
-
BeanParameters::pod_color
helios::RGBcolor pod_color
Color of bean pods.
Definition: CanopyGenerator.h:1045
-
BeanParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:1009
-
BeanParameters::stem_length
float stem_length
Length of stems before splitting to leaflets.
Definition: CanopyGenerator.h:1024
-
BeanParameters::pod_subdivisions
uint pod_subdivisions
Number of lengthwise subdivisions making up pods.
Definition: CanopyGenerator.h:1048
-
BeanParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1885
-
BeanParameters::stem_radius
float stem_radius
Radius of main stem at base.
Definition: CanopyGenerator.h:1021
-
BeanParameters::germination_probability
float germination_probability
Probability that a plant in the canopy germinated.
Definition: CanopyGenerator.h:1039
-
BeanParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:1012
-
BeanParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1889
-
BeanParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1806
-
BeanParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition: CanopyGenerator.h:1015
-
BeanParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:1033
-
BeanParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:1036
-
ConicalCrownsCanopyParameters
Parameters defining the canopy with conical crowns.
Definition: CanopyGenerator.h:171
-
ConicalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:224
-
ConicalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition: CanopyGenerator.h:206
-
ConicalCrownsCanopyParameters::ConicalCrownsCanopyParameters
ConicalCrownsCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:233
-
ConicalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:197
-
ConicalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition: CanopyGenerator.h:203
-
ConicalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition: CanopyGenerator.h:200
-
ConicalCrownsCanopyParameters::crown_height
float crown_height
Height of the conical crowns.
Definition: CanopyGenerator.h:215
-
ConicalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition: CanopyGenerator.h:221
-
ConicalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:335
-
ConicalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition: CanopyGenerator.h:218
-
ConicalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition: CanopyGenerator.h:194
-
ConicalCrownsCanopyParameters::crown_radius
float crown_radius
Radius of the conical crowns at the base.
Definition: CanopyGenerator.h:212
-
ConicalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition: CanopyGenerator.h:209
-
ConicalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:331
-
ConicalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:261
-
GobletGrapevineParameters
Parameters defining the grapevine canopy with goblet (vent a taille) trellis.
Definition: CanopyGenerator.h:464
-
GobletGrapevineParameters::GobletGrapevineParameters
GobletGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:794
-
GobletGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:834
-
GobletGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:838
-
GobletGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:830
-
HomogeneousCanopyParameters
Parameters defining the homogeneous canopy.
Definition: CanopyGenerator.h:58
-
HomogeneousCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:75
-
HomogeneousCanopyParameters::buffer
std::string buffer
String specifying whether leaves should be placed so that leaf edges do not fall outside the specifie...
Definition: CanopyGenerator.h:108
-
HomogeneousCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition: CanopyGenerator.h:81
-
HomogeneousCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition: CanopyGenerator.h:90
-
HomogeneousCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:127
-
HomogeneousCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:131
-
HomogeneousCanopyParameters::canopy_extent
helios::vec2 canopy_extent
Horizontal extent of the canopy in the x- and y-directions.
Definition: CanopyGenerator.h:102
-
HomogeneousCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:84
-
HomogeneousCanopyParameters::canopy_height
float canopy_height
Height of the canopy.
Definition: CanopyGenerator.h:99
-
HomogeneousCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition: CanopyGenerator.h:93
-
HomogeneousCanopyParameters::HomogeneousCanopyParameters
HomogeneousCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:51
-
HomogeneousCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition: CanopyGenerator.h:87
-
HomogeneousCanopyParameters::leaf_area_index
float leaf_area_index
One-sided leaf area index of the canopy.
Definition: CanopyGenerator.h:96
-
SorghumCanopyParameters
Parameters defining Sorghum plant canopy.
Definition: CanopyGenerator.h:764
-
SorghumCanopyParameters::s5_stem_subdivisions
int s5_stem_subdivisions
Number of stem radial subdivisions for stage 5.
Definition: CanopyGenerator.h:944
-
SorghumCanopyParameters::s2_stem_subdivisions
float s2_stem_subdivisions
Number of stem radial subdivisions for stage 2.
Definition: CanopyGenerator.h:833
-
SorghumCanopyParameters::s1_leaf1_angle
float s1_leaf1_angle
Leaf1 vertical angle of rotation for stage 1.
Definition: CanopyGenerator.h:810
-
SorghumCanopyParameters::s5_stem_length
float s5_stem_length
Length of the sorghum stem for stage 5.
Definition: CanopyGenerator.h:935
-
SorghumCanopyParameters::s4_seed_texture_file
std::string s4_seed_texture_file
Texture map of the panicle for stage 4.
Definition: CanopyGenerator.h:915
-
SorghumCanopyParameters::s5_number_of_leaves
int s5_number_of_leaves
Number of leaves for the sorghum plant, stage 5.
Definition: CanopyGenerator.h:962
-
SorghumCanopyParameters::s5_mean_leaf_angle
float s5_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 1...
Definition: CanopyGenerator.h:965
-
SorghumCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1760
-
SorghumCanopyParameters::s4_stem_length
float s4_stem_length
Length of the sorghum stem for stage 4.
Definition: CanopyGenerator.h:900
-
SorghumCanopyParameters::s3_leaf_subdivisions
helios::int2 s3_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
Definition: CanopyGenerator.h:886
-
SorghumCanopyParameters::s1_leaf_texture_file
std::string s1_leaf_texture_file
Texture map for sorghum leaf1 for stage 1.
Definition: CanopyGenerator.h:822
-
SorghumCanopyParameters::s1_leaf_size2
helios::vec2 s1_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition: CanopyGenerator.h:804
-
SorghumCanopyParameters::s4_stem_radius
float s4_stem_radius
Radius of the sorghum stem for stage 4.
Definition: CanopyGenerator.h:903
-
SorghumCanopyParameters::s3_mean_leaf_angle
float s3_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is ...
Definition: CanopyGenerator.h:892
-
SorghumCanopyParameters::s4_stem_subdivisions
float s4_stem_subdivisions
Number of stem radial subdivisions for stage 4.
Definition: CanopyGenerator.h:906
-
SorghumCanopyParameters::s2_leaf1_angle
float s2_leaf1_angle
Leaf1 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:851
-
SorghumCanopyParameters::s2_leaf_texture_file
std::string s2_leaf_texture_file
Texture map for sorghum leaf for stage 2.
Definition: CanopyGenerator.h:869
-
SorghumCanopyParameters::s5_panicle_subdivisions
int s5_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
Definition: CanopyGenerator.h:950
-
SorghumCanopyParameters::s2_leaf4_angle
float s2_leaf4_angle
Leaf4 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:860
-
SorghumCanopyParameters::s4_mean_leaf_angle
float s4_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5...
Definition: CanopyGenerator.h:927
-
SorghumCanopyParameters::s2_leaf5_angle
float s2_leaf5_angle
Leaf5 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:863
-
SorghumCanopyParameters::s2_leaf_subdivisions
helios::int2 s2_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
Definition: CanopyGenerator.h:866
-
SorghumCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:972
-
SorghumCanopyParameters::s4_leaf_size
helios::vec2 s4_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
Definition: CanopyGenerator.h:918
-
SorghumCanopyParameters::s2_leaf3_angle
float s2_leaf3_angle
Leaf3 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:857
-
SorghumCanopyParameters::s4_leaf_subdivisions
helios::int2 s4_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
Definition: CanopyGenerator.h:921
-
SorghumCanopyParameters::s2_stem_radius
float s2_stem_radius
Radius of the sorghum stem for stage 2.
Definition: CanopyGenerator.h:830
-
SorghumCanopyParameters::SorghumCanopyParameters
SorghumCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1310
-
SorghumCanopyParameters::s5_stem_bend
float s5_stem_bend
Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the i...
Definition: CanopyGenerator.h:941
-
SorghumCanopyParameters::s1_leaf_size1
helios::vec2 s1_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition: CanopyGenerator.h:801
-
SorghumCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1446
-
SorghumCanopyParameters::s5_stem_radius
float s5_stem_radius
Radius of the sorghum stem for stage 5.
Definition: CanopyGenerator.h:938
-
SorghumCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:978
-
SorghumCanopyParameters::s3_stem_radius
float s3_stem_radius
Radius of the sorghum stem for stage 3.
Definition: CanopyGenerator.h:877
-
SorghumCanopyParameters::s5_leaf_texture_file
std::string s5_leaf_texture_file
Texture map for sorghum leaf, stage 5.
Definition: CanopyGenerator.h:968
-
SorghumCanopyParameters::s5_leaf_subdivisions
helios::int2 s5_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
Definition: CanopyGenerator.h:959
-
SorghumCanopyParameters::s1_leaf_size3
helios::vec2 s1_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition: CanopyGenerator.h:807
-
SorghumCanopyParameters::s4_number_of_leaves
int s4_number_of_leaves
Number of leaves for the sorghum plant, stage 4.
Definition: CanopyGenerator.h:924
-
SorghumCanopyParameters::s4_panicle_subdivisions
int s4_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
Definition: CanopyGenerator.h:912
-
SorghumCanopyParameters::s3_stem_length
float s3_stem_length
Length of the sorghum stem for stage 3.
Definition: CanopyGenerator.h:874
-
SorghumCanopyParameters::s3_leaf_texture_file
std::string s3_leaf_texture_file
Texture map for sorghum leaf for stage 3.
Definition: CanopyGenerator.h:895
-
SorghumCanopyParameters::s2_leaf_size3
helios::vec2 s2_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:842
-
SorghumCanopyParameters::s1_stem_radius
float s1_stem_radius
Radius of the sorghum stem for stage 1.
Definition: CanopyGenerator.h:795
-
SorghumCanopyParameters::s5_panicle_size
helios::vec2 s5_panicle_size
Size of panicle in x- and y- directions for stage 5.
Definition: CanopyGenerator.h:947
-
SorghumCanopyParameters::s3_number_of_leaves
int s3_number_of_leaves
Number of leaves along the stem for stage 3.
Definition: CanopyGenerator.h:889
-
SorghumCanopyParameters::s2_leaf_size5
helios::vec2 s2_leaf_size5
Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:848
-
SorghumCanopyParameters::s5_leaf_size
helios::vec2 s5_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
Definition: CanopyGenerator.h:956
-
SorghumCanopyParameters::s1_stem_subdivisions
float s1_stem_subdivisions
Number of stem radial subdivisions for stage 1.
Definition: CanopyGenerator.h:798
-
SorghumCanopyParameters::s2_leaf_size4
helios::vec2 s2_leaf_size4
Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:845
-
SorghumCanopyParameters::s1_leaf_subdivisions
helios::int2 s1_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
Definition: CanopyGenerator.h:819
-
SorghumCanopyParameters::s4_leaf_texture_file
std::string s4_leaf_texture_file
Texture map for sorghum leaf, stage 4.
Definition: CanopyGenerator.h:930
-
SorghumCanopyParameters::s2_leaf_size2
helios::vec2 s2_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:839
-
SorghumCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:975
-
SorghumCanopyParameters::s3_leaf_size
helios::vec2 s3_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
Definition: CanopyGenerator.h:883
-
SorghumCanopyParameters::s2_stem_length
float s2_stem_length
Length of the sorghum stem for stage 2.
Definition: CanopyGenerator.h:827
-
SorghumCanopyParameters::s1_leaf2_angle
float s1_leaf2_angle
Leaf2 vertical angle of rotation for stage 1.
Definition: CanopyGenerator.h:813
-
SorghumCanopyParameters::s3_stem_subdivisions
float s3_stem_subdivisions
Number of stem radial subdivisions for stage 3.
Definition: CanopyGenerator.h:880
-
SorghumCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1764
-
SorghumCanopyParameters::s1_stem_length
float s1_stem_length
Length of the sorghum stem for stage 1.
Definition: CanopyGenerator.h:792
-
SorghumCanopyParameters::sorghum_stage
int sorghum_stage
Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation ...
Definition: CanopyGenerator.h:787
-
SorghumCanopyParameters::s1_leaf3_angle
float s1_leaf3_angle
Leaf3 vertical angle of rotation for stage 1.
Definition: CanopyGenerator.h:816
-
SorghumCanopyParameters::s2_leaf_size1
helios::vec2 s2_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition: CanopyGenerator.h:836
-
SorghumCanopyParameters::s5_seed_texture_file
std::string s5_seed_texture_file
Texture map of the panicle for stage 5.
Definition: CanopyGenerator.h:953
-
SorghumCanopyParameters::s4_panicle_size
helios::vec2 s4_panicle_size
Size of panicle in x- and y- directions for stage 4.
Definition: CanopyGenerator.h:909
-
SorghumCanopyParameters::s2_leaf2_angle
float s2_leaf2_angle
Leaf2 vertical angle of rotation for stage 2.
Definition: CanopyGenerator.h:854
-
SphericalCrownsCanopyParameters
Parameters defining the canopy with spherical crowns.
Definition: CanopyGenerator.h:113
-
SphericalCrownsCanopyParameters::crown_radius
helios::vec3 crown_radius
Radius of the spherical crowns.
Definition: CanopyGenerator.h:154
-
SphericalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition: CanopyGenerator.h:136
-
SphericalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition: CanopyGenerator.h:142
-
SphericalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition: CanopyGenerator.h:145
-
SphericalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:163
-
SphericalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition: CanopyGenerator.h:160
-
SphericalCrownsCanopyParameters::SphericalCrownsCanopyParameters
SphericalCrownsCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:135
-
SphericalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:139
-
SphericalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition: CanopyGenerator.h:148
-
SphericalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition: CanopyGenerator.h:151
-
SphericalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition: CanopyGenerator.h:157
-
SphericalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:161
-
SphericalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:229
-
SphericalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:225
-
SplitGrapevineParameters
Parameters defining the grapevine canopy with a split (quad) trellis.
Definition: CanopyGenerator.h:398
-
SplitGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:740
-
SplitGrapevineParameters::shoot_angle_base_spread
float shoot_angle_base_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition: CanopyGenerator.h:428
-
SplitGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:717
-
SplitGrapevineParameters::shoot_angle_base
float shoot_angle_base
Average angle of the shoot at the base (shoot_angle_base=0 points shoots upward; shoot_angle_base=M_P...
Definition: CanopyGenerator.h:426
-
SplitGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:736
-
SplitGrapevineParameters::SplitGrapevineParameters
SplitGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:670
-
SplitGrapevineParameters::cordon_spacing
float cordon_spacing
Spacing between two opposite cordons.
Definition: CanopyGenerator.h:421
-
SplitGrapevineParameters::cordon_spacing_spread
float cordon_spacing_spread
Spread value for the cordon spacing. With any new canopy or plant generation, the cordon spacing woul...
Definition: CanopyGenerator.h:423
-
SplitGrapevineParameters::shoot_angle_tip_spread
float shoot_angle_tip_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition: CanopyGenerator.h:433
-
SplitGrapevineParameters::shoot_angle_tip
float shoot_angle_tip
Average angle of the shoot at the tip (shoot_angle=0 is a completely vertical shoot; shoot_angle=M_PI...
Definition: CanopyGenerator.h:431
-
StrawberryParameters
Parameters defining the strawberry plant canopy.
Definition: CanopyGenerator.h:626
-
StrawberryParameters::stem_subdivisions
int stem_subdivisions
Number of radial subdivisions for stem tubes.
Definition: CanopyGenerator.h:661
-
StrawberryParameters::stems_per_plant
int stems_per_plant
Number of stems per plant.
Definition: CanopyGenerator.h:664
-
StrawberryParameters::fruit_radius
float fruit_radius
Radius of strawberry fruit.
Definition: CanopyGenerator.h:682
-
StrawberryParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:670
-
StrawberryParameters::StrawberryParameters
StrawberryParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1081
-
StrawberryParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition: CanopyGenerator.h:688
-
StrawberryParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:679
-
StrawberryParameters::plant_height
float plant_height
Height of the plant.
Definition: CanopyGenerator.h:676
-
StrawberryParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1119
-
StrawberryParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1193
-
StrawberryParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:652
-
StrawberryParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1197
-
StrawberryParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for strawberry fruit.
Definition: CanopyGenerator.h:685
-
StrawberryParameters::clusters_per_stem
float clusters_per_stem
Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
Definition: CanopyGenerator.h:691
-
StrawberryParameters::stem_radius
float stem_radius
Radius of stems.
Definition: CanopyGenerator.h:667
-
StrawberryParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:655
-
StrawberryParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:673
-
StrawberryParameters::stem_color
helios::RGBcolor stem_color
Color of stems.
Definition: CanopyGenerator.h:658
-
StrawberryParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:649
-
TomatoParameters
Parameters defining the tomato plant canopy.
Definition: CanopyGenerator.h:565
-
TomatoParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition: CanopyGenerator.h:600
-
TomatoParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1073
-
TomatoParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:588
-
TomatoParameters::fruit_color
helios::RGBcolor fruit_color
Color of tomato fruit.
Definition: CanopyGenerator.h:618
-
TomatoParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:591
-
TomatoParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:612
-
TomatoParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition: CanopyGenerator.h:621
-
TomatoParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition: CanopyGenerator.h:597
-
TomatoParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:606
-
TomatoParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1008
-
TomatoParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:603
-
TomatoParameters::TomatoParameters
TomatoParameters()
Default constructor.
Definition: CanopyGenerator.cpp:976
-
TomatoParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:594
-
TomatoParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1077
-
TomatoParameters::plant_height
float plant_height
Height of the plant.
Definition: CanopyGenerator.h:609
-
TomatoParameters::fruit_radius
float fruit_radius
Radius of tomato fruit.
Definition: CanopyGenerator.h:615
-
UnilateralGrapevineParameters
Parameters defining the grapevine canopy with unilateral trellis.
Definition: CanopyGenerator.h:438
-
UnilateralGrapevineParameters::UnilateralGrapevineParameters
UnilateralGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:744
-
UnilateralGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:786
-
UnilateralGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:782
-
UnilateralGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:790
-
VSPGrapevineParameters
Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis.
Definition: CanopyGenerator.h:373
-
VSPGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:658
-
VSPGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:662
-
VSPGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:666
-
VSPGrapevineParameters::VSPGrapevineParameters
VSPGrapevineParameters()
Default constructor.
Definition: CanopyGenerator.cpp:620
-
WalnutCanopyParameters
Parameters defining the walnut tree canopy.
Definition: CanopyGenerator.h:696
-
WalnutCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:759
-
WalnutCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for branch tubes.
Definition: CanopyGenerator.h:731
-
WalnutCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition: CanopyGenerator.h:744
-
WalnutCanopyParameters::WalnutCanopyParameters
WalnutCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:1201
-
WalnutCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:1302
-
WalnutCanopyParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for walnut fruit.
Definition: CanopyGenerator.h:753
-
WalnutCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:722
-
WalnutCanopyParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition: CanopyGenerator.h:756
-
WalnutCanopyParameters::trunk_radius
float trunk_radius
Radius of trunk.
Definition: CanopyGenerator.h:734
-
WalnutCanopyParameters::fruit_radius
float fruit_radius
Radius of walnuts.
Definition: CanopyGenerator.h:750
-
WalnutCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:725
-
WalnutCanopyParameters::leaf_length
float leaf_length
Maximum length of leaves along midrib.
Definition: CanopyGenerator.h:719
-
WalnutCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:1237
-
WalnutCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for wood/branches.
Definition: CanopyGenerator.h:728
-
WalnutCanopyParameters::branch_length
helios::vec3 branch_length
Average length of branches in each recursive branch level. For example, the first (....
Definition: CanopyGenerator.h:740
-
WalnutCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:1306
-
WalnutCanopyParameters::trunk_height
float trunk_height
Height of the trunk.
Definition: CanopyGenerator.h:737
-
WalnutCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition: CanopyGenerator.h:747
-
WhiteSpruceCanopyParameters
Parameters defining the white spruce.
Definition: CanopyGenerator.h:489
-
WhiteSpruceCanopyParameters::needle_width
float needle_width
Width of needles.
Definition: CanopyGenerator.h:512
-
WhiteSpruceCanopyParameters::needle_subdivisions
helios::int2 needle_subdivisions
Number of sub-division segments per needle.
Definition: CanopyGenerator.h:518
-
WhiteSpruceCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition: CanopyGenerator.cpp:884
-
WhiteSpruceCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:972
-
WhiteSpruceCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition: CanopyGenerator.h:524
-
WhiteSpruceCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition: CanopyGenerator.h:557
-
WhiteSpruceCanopyParameters::needle_length
float needle_length
Length of needles.
Definition: CanopyGenerator.h:515
-
WhiteSpruceCanopyParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition: CanopyGenerator.h:530
-
WhiteSpruceCanopyParameters::level_spacing
float level_spacing
Vertical spacing between branching levels.
Definition: CanopyGenerator.h:545
-
WhiteSpruceCanopyParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition: CanopyGenerator.h:542
-
WhiteSpruceCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition: CanopyGenerator.h:527
-
WhiteSpruceCanopyParameters::shoot_angle
float shoot_angle
Maximum shoot angle.
Definition: CanopyGenerator.h:551
-
WhiteSpruceCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition: CanopyGenerator.h:560
-
WhiteSpruceCanopyParameters::base_height
float base_height
Height at which branches start.
Definition: CanopyGenerator.h:536
-
WhiteSpruceCanopyParameters::crown_radius
float crown_radius
Radius of the crown at the base.
Definition: CanopyGenerator.h:539
-
WhiteSpruceCanopyParameters::needle_color
helios::RGBcolor needle_color
Color of needles.
Definition: CanopyGenerator.h:521
-
WhiteSpruceCanopyParameters::trunk_radius
float trunk_radius
Radius of the trunk at the base.
Definition: CanopyGenerator.h:533
-
WhiteSpruceCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition: CanopyGenerator.cpp:968
-
WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters
WhiteSpruceCanopyParameters()
Default constructor.
Definition: CanopyGenerator.cpp:842
-
WhiteSpruceCanopyParameters::branches_per_level
int branches_per_level
Number of primary branches on the bottom level.
Definition: CanopyGenerator.h:548
-
WhiteSpruceCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition: CanopyGenerator.h:554
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
BaseGrapeVineParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:284
+
BaseGrapeVineParameters::shoot_radius_spread
float shoot_radius_spread
Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be...
Definition CanopyGenerator.h:326
+
BaseGrapeVineParameters::missing_plant_probability
float missing_plant_probability
Probability for a plant to be missing.
Definition CanopyGenerator.h:281
+
BaseGrapeVineParameters::dead_probability
float dead_probability
Probability for a plant to be dead, i.e. without any leaves or grapes.
Definition CanopyGenerator.h:275
+
BaseGrapeVineParameters::cluster_radius
float cluster_radius
Maximum horizontal radius of grape clusters.
Definition CanopyGenerator.h:347
+
BaseGrapeVineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:392
+
BaseGrapeVineParameters::cluster_height_max
float cluster_height_max
Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
Definition CanopyGenerator.h:352
+
BaseGrapeVineParameters::BaseGrapeVineParameters
BaseGrapeVineParameters()
Default constructor.
Definition CanopyGenerator.cpp:339
+
BaseGrapeVineParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:264
+
BaseGrapeVineParameters::leaf_spacing_fraction_spread
float leaf_spacing_fraction_spread
Spread value for the leaf spacing fraction. With any new canopy or plant generation,...
Definition CanopyGenerator.h:336
+
BaseGrapeVineParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition CanopyGenerator.h:270
+
BaseGrapeVineParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:289
+
BaseGrapeVineParameters::grape_subdivisions
uint grape_subdivisions
Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subd...
Definition CanopyGenerator.h:360
+
BaseGrapeVineParameters::plant_spacing_spread
float plant_spacing_spread
Spread value for the plant spacing. The spacing between adjacent plants along a row would vary betwee...
Definition CanopyGenerator.h:286
+
BaseGrapeVineParameters::shoot_length_spread
float shoot_length_spread
Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be...
Definition CanopyGenerator.h:321
+
BaseGrapeVineParameters::leaf_spacing_fraction
float leaf_spacing_fraction
Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = ...
Definition CanopyGenerator.h:334
+
BaseGrapeVineParameters::trunk_height_spread
float trunk_height_spread
Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be...
Definition CanopyGenerator.h:296
+
BaseGrapeVineParameters::shoots_per_cordon_spread
uint shoots_per_cordon_spread
Spread value for the number of shoots per cordon. With any new canopy or plant generation,...
Definition CanopyGenerator.h:331
+
BaseGrapeVineParameters::cordon_radius
float cordon_radius
Radius of cordon branches.
Definition CanopyGenerator.h:314
+
BaseGrapeVineParameters::trunk_radius_spread
float trunk_radius_spread
Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be...
Definition CanopyGenerator.h:301
+
BaseGrapeVineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:612
+
BaseGrapeVineParameters::leaf_width
float leaf_width
Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is th...
Definition CanopyGenerator.h:256
+
BaseGrapeVineParameters::cordon_height_spread
float cordon_height_spread
Spread value for the cordon height. With any new canopy or plant generation, the cordon height would ...
Definition CanopyGenerator.h:311
+
BaseGrapeVineParameters::canopy_rotation_spread
float canopy_rotation_spread
Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotat...
Definition CanopyGenerator.h:368
+
BaseGrapeVineParameters::wood_subdivisions_spread
int wood_subdivisions_spread
Spread value for the number of wood subdivisions. With any new canopy or plant generation,...
Definition CanopyGenerator.h:272
+
BaseGrapeVineParameters::shoots_per_cordon
uint shoots_per_cordon
Number of shoots on each cordon.
Definition CanopyGenerator.h:329
+
BaseGrapeVineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:616
+
BaseGrapeVineParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition CanopyGenerator.h:294
+
BaseGrapeVineParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:261
+
BaseGrapeVineParameters::shoot_length
float shoot_length
Length of shoots.
Definition CanopyGenerator.h:319
+
BaseGrapeVineParameters::cluster_height_max_spread
float cluster_height_max_spread
Spread value for the cluster height. With any new canopy or plant generation, the cluster height woul...
Definition CanopyGenerator.h:354
+
BaseGrapeVineParameters::grape_subdivisions_spread
uint grape_subdivisions_spread
Spread value for the number of grape subdivisions. With any new canopy or plant generation,...
Definition CanopyGenerator.h:362
+
BaseGrapeVineParameters::trunk_radius
float trunk_radius
Radius of the trunk at the widest point.
Definition CanopyGenerator.h:299
+
BaseGrapeVineParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition CanopyGenerator.h:324
+
BaseGrapeVineParameters::cordon_length
float cordon_length
Length of the cordons. By default, half the plant spacing.
Definition CanopyGenerator.h:304
+
BaseGrapeVineParameters::cluster_radius_spread
float cluster_radius_spread
Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius woul...
Definition CanopyGenerator.h:349
+
BaseGrapeVineParameters::grape_color
helios::RGBcolor grape_color
Color of grapes.
Definition CanopyGenerator.h:357
+
BaseGrapeVineParameters::cordon_radius_spread
float cordon_radius_spread
Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would ...
Definition CanopyGenerator.h:316
+
BaseGrapeVineParameters::leaf_width_spread
float leaf_width_spread
Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf wi...
Definition CanopyGenerator.h:258
+
BaseGrapeVineParameters::grape_radius_spread
float grape_radius_spread
Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be...
Definition CanopyGenerator.h:344
+
BaseGrapeVineParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:339
+
BaseGrapeVineParameters::row_spacing_spread
float row_spacing_spread
Spread value for the row spacing. This allows to vary the alignment of plants along a row....
Definition CanopyGenerator.h:291
+
BaseGrapeVineParameters::cordon_height
float cordon_height
Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
Definition CanopyGenerator.h:309
+
BaseGrapeVineParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition CanopyGenerator.h:267
+
BaseGrapeVineParameters::grape_radius
float grape_radius
Radius of grape berries.
Definition CanopyGenerator.h:342
+
BaseGrapeVineParameters::cordon_length_spread
float cordon_length_spread
Spread value for the cordon length. With any new canopy or plant generation, the cordon length would ...
Definition CanopyGenerator.h:306
+
BeanParameters
Parameters defining the bean plant canopy.
Definition CanopyGenerator.h:983
+
BeanParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:1030
+
BeanParameters::leaflet_length
float leaflet_length
Length of the leaflet from base to tip leaf.
Definition CanopyGenerator.h:1027
+
BeanParameters::pod_length
float pod_length
Length of bean pods.
Definition CanopyGenerator.h:1042
+
BeanParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:1006
+
BeanParameters::BeanParameters
BeanParameters()
Default constructor.
Definition CanopyGenerator.cpp:1768
+
BeanParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition CanopyGenerator.h:1018
+
BeanParameters::pod_color
helios::RGBcolor pod_color
Color of bean pods.
Definition CanopyGenerator.h:1045
+
BeanParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:1009
+
BeanParameters::stem_length
float stem_length
Length of stems before splitting to leaflets.
Definition CanopyGenerator.h:1024
+
BeanParameters::pod_subdivisions
uint pod_subdivisions
Number of lengthwise subdivisions making up pods.
Definition CanopyGenerator.h:1048
+
BeanParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1885
+
BeanParameters::stem_radius
float stem_radius
Radius of main stem at base.
Definition CanopyGenerator.h:1021
+
BeanParameters::germination_probability
float germination_probability
Probability that a plant in the canopy germinated.
Definition CanopyGenerator.h:1039
+
BeanParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:1012
+
BeanParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1889
+
BeanParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1806
+
BeanParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition CanopyGenerator.h:1015
+
BeanParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:1033
+
BeanParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:1036
+
ConicalCrownsCanopyParameters
Parameters defining the canopy with conical crowns.
Definition CanopyGenerator.h:171
+
ConicalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:224
+
ConicalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition CanopyGenerator.h:206
+
ConicalCrownsCanopyParameters::ConicalCrownsCanopyParameters
ConicalCrownsCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:233
+
ConicalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:197
+
ConicalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition CanopyGenerator.h:203
+
ConicalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition CanopyGenerator.h:200
+
ConicalCrownsCanopyParameters::crown_height
float crown_height
Height of the conical crowns.
Definition CanopyGenerator.h:215
+
ConicalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition CanopyGenerator.h:221
+
ConicalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:335
+
ConicalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition CanopyGenerator.h:218
+
ConicalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition CanopyGenerator.h:194
+
ConicalCrownsCanopyParameters::crown_radius
float crown_radius
Radius of the conical crowns at the base.
Definition CanopyGenerator.h:212
+
ConicalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition CanopyGenerator.h:209
+
ConicalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:331
+
ConicalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:261
+
GobletGrapevineParameters
Parameters defining the grapevine canopy with goblet (vent a taille) trellis.
Definition CanopyGenerator.h:464
+
GobletGrapevineParameters::GobletGrapevineParameters
GobletGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:794
+
GobletGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:834
+
GobletGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:838
+
GobletGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:830
+
HomogeneousCanopyParameters
Parameters defining the homogeneous canopy.
Definition CanopyGenerator.h:58
+
HomogeneousCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:75
+
HomogeneousCanopyParameters::buffer
std::string buffer
String specifying whether leaves should be placed so that leaf edges do not fall outside the specifie...
Definition CanopyGenerator.h:108
+
HomogeneousCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition CanopyGenerator.h:81
+
HomogeneousCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition CanopyGenerator.h:90
+
HomogeneousCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:127
+
HomogeneousCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:131
+
HomogeneousCanopyParameters::canopy_extent
helios::vec2 canopy_extent
Horizontal extent of the canopy in the x- and y-directions.
Definition CanopyGenerator.h:102
+
HomogeneousCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:84
+
HomogeneousCanopyParameters::canopy_height
float canopy_height
Height of the canopy.
Definition CanopyGenerator.h:99
+
HomogeneousCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition CanopyGenerator.h:93
+
HomogeneousCanopyParameters::HomogeneousCanopyParameters
HomogeneousCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:51
+
HomogeneousCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition CanopyGenerator.h:87
+
HomogeneousCanopyParameters::leaf_area_index
float leaf_area_index
One-sided leaf area index of the canopy.
Definition CanopyGenerator.h:96
+
SorghumCanopyParameters
Parameters defining Sorghum plant canopy.
Definition CanopyGenerator.h:764
+
SorghumCanopyParameters::s5_stem_subdivisions
int s5_stem_subdivisions
Number of stem radial subdivisions for stage 5.
Definition CanopyGenerator.h:944
+
SorghumCanopyParameters::s2_stem_subdivisions
float s2_stem_subdivisions
Number of stem radial subdivisions for stage 2.
Definition CanopyGenerator.h:833
+
SorghumCanopyParameters::s1_leaf1_angle
float s1_leaf1_angle
Leaf1 vertical angle of rotation for stage 1.
Definition CanopyGenerator.h:810
+
SorghumCanopyParameters::s5_stem_length
float s5_stem_length
Length of the sorghum stem for stage 5.
Definition CanopyGenerator.h:935
+
SorghumCanopyParameters::s4_seed_texture_file
std::string s4_seed_texture_file
Texture map of the panicle for stage 4.
Definition CanopyGenerator.h:915
+
SorghumCanopyParameters::s5_number_of_leaves
int s5_number_of_leaves
Number of leaves for the sorghum plant, stage 5.
Definition CanopyGenerator.h:962
+
SorghumCanopyParameters::s5_mean_leaf_angle
float s5_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 1...
Definition CanopyGenerator.h:965
+
SorghumCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1760
+
SorghumCanopyParameters::s4_stem_length
float s4_stem_length
Length of the sorghum stem for stage 4.
Definition CanopyGenerator.h:900
+
SorghumCanopyParameters::s3_leaf_subdivisions
helios::int2 s3_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
Definition CanopyGenerator.h:886
+
SorghumCanopyParameters::s1_leaf_texture_file
std::string s1_leaf_texture_file
Texture map for sorghum leaf1 for stage 1.
Definition CanopyGenerator.h:822
+
SorghumCanopyParameters::s1_leaf_size2
helios::vec2 s1_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition CanopyGenerator.h:804
+
SorghumCanopyParameters::s4_stem_radius
float s4_stem_radius
Radius of the sorghum stem for stage 4.
Definition CanopyGenerator.h:903
+
SorghumCanopyParameters::s3_mean_leaf_angle
float s3_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is ...
Definition CanopyGenerator.h:892
+
SorghumCanopyParameters::s4_stem_subdivisions
float s4_stem_subdivisions
Number of stem radial subdivisions for stage 4.
Definition CanopyGenerator.h:906
+
SorghumCanopyParameters::s2_leaf1_angle
float s2_leaf1_angle
Leaf1 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:851
+
SorghumCanopyParameters::s2_leaf_texture_file
std::string s2_leaf_texture_file
Texture map for sorghum leaf for stage 2.
Definition CanopyGenerator.h:869
+
SorghumCanopyParameters::s5_panicle_subdivisions
int s5_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
Definition CanopyGenerator.h:950
+
SorghumCanopyParameters::s2_leaf4_angle
float s2_leaf4_angle
Leaf4 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:860
+
SorghumCanopyParameters::s4_mean_leaf_angle
float s4_mean_leaf_angle
Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5...
Definition CanopyGenerator.h:927
+
SorghumCanopyParameters::s2_leaf5_angle
float s2_leaf5_angle
Leaf5 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:863
+
SorghumCanopyParameters::s2_leaf_subdivisions
helios::int2 s2_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
Definition CanopyGenerator.h:866
+
SorghumCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:972
+
SorghumCanopyParameters::s4_leaf_size
helios::vec2 s4_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
Definition CanopyGenerator.h:918
+
SorghumCanopyParameters::s2_leaf3_angle
float s2_leaf3_angle
Leaf3 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:857
+
SorghumCanopyParameters::s4_leaf_subdivisions
helios::int2 s4_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
Definition CanopyGenerator.h:921
+
SorghumCanopyParameters::s2_stem_radius
float s2_stem_radius
Radius of the sorghum stem for stage 2.
Definition CanopyGenerator.h:830
+
SorghumCanopyParameters::SorghumCanopyParameters
SorghumCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:1310
+
SorghumCanopyParameters::s5_stem_bend
float s5_stem_bend
Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the i...
Definition CanopyGenerator.h:941
+
SorghumCanopyParameters::s1_leaf_size1
helios::vec2 s1_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition CanopyGenerator.h:801
+
SorghumCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1446
+
SorghumCanopyParameters::s5_stem_radius
float s5_stem_radius
Radius of the sorghum stem for stage 5.
Definition CanopyGenerator.h:938
+
SorghumCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:978
+
SorghumCanopyParameters::s3_stem_radius
float s3_stem_radius
Radius of the sorghum stem for stage 3.
Definition CanopyGenerator.h:877
+
SorghumCanopyParameters::s5_leaf_texture_file
std::string s5_leaf_texture_file
Texture map for sorghum leaf, stage 5.
Definition CanopyGenerator.h:968
+
SorghumCanopyParameters::s5_leaf_subdivisions
helios::int2 s5_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
Definition CanopyGenerator.h:959
+
SorghumCanopyParameters::s1_leaf_size3
helios::vec2 s1_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
Definition CanopyGenerator.h:807
+
SorghumCanopyParameters::s4_number_of_leaves
int s4_number_of_leaves
Number of leaves for the sorghum plant, stage 4.
Definition CanopyGenerator.h:924
+
SorghumCanopyParameters::s4_panicle_subdivisions
int s4_panicle_subdivisions
Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
Definition CanopyGenerator.h:912
+
SorghumCanopyParameters::s3_stem_length
float s3_stem_length
Length of the sorghum stem for stage 3.
Definition CanopyGenerator.h:874
+
SorghumCanopyParameters::s3_leaf_texture_file
std::string s3_leaf_texture_file
Texture map for sorghum leaf for stage 3.
Definition CanopyGenerator.h:895
+
SorghumCanopyParameters::s2_leaf_size3
helios::vec2 s2_leaf_size3
Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:842
+
SorghumCanopyParameters::s1_stem_radius
float s1_stem_radius
Radius of the sorghum stem for stage 1.
Definition CanopyGenerator.h:795
+
SorghumCanopyParameters::s5_panicle_size
helios::vec2 s5_panicle_size
Size of panicle in x- and y- directions for stage 5.
Definition CanopyGenerator.h:947
+
SorghumCanopyParameters::s3_number_of_leaves
int s3_number_of_leaves
Number of leaves along the stem for stage 3.
Definition CanopyGenerator.h:889
+
SorghumCanopyParameters::s2_leaf_size5
helios::vec2 s2_leaf_size5
Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:848
+
SorghumCanopyParameters::s5_leaf_size
helios::vec2 s5_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
Definition CanopyGenerator.h:956
+
SorghumCanopyParameters::s1_stem_subdivisions
float s1_stem_subdivisions
Number of stem radial subdivisions for stage 1.
Definition CanopyGenerator.h:798
+
SorghumCanopyParameters::s2_leaf_size4
helios::vec2 s2_leaf_size4
Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:845
+
SorghumCanopyParameters::s1_leaf_subdivisions
helios::int2 s1_leaf_subdivisions
Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
Definition CanopyGenerator.h:819
+
SorghumCanopyParameters::s4_leaf_texture_file
std::string s4_leaf_texture_file
Texture map for sorghum leaf, stage 4.
Definition CanopyGenerator.h:930
+
SorghumCanopyParameters::s2_leaf_size2
helios::vec2 s2_leaf_size2
Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:839
+
SorghumCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:975
+
SorghumCanopyParameters::s3_leaf_size
helios::vec2 s3_leaf_size
Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
Definition CanopyGenerator.h:883
+
SorghumCanopyParameters::s2_stem_length
float s2_stem_length
Length of the sorghum stem for stage 2.
Definition CanopyGenerator.h:827
+
SorghumCanopyParameters::s1_leaf2_angle
float s1_leaf2_angle
Leaf2 vertical angle of rotation for stage 1.
Definition CanopyGenerator.h:813
+
SorghumCanopyParameters::s3_stem_subdivisions
float s3_stem_subdivisions
Number of stem radial subdivisions for stage 3.
Definition CanopyGenerator.h:880
+
SorghumCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1764
+
SorghumCanopyParameters::s1_stem_length
float s1_stem_length
Length of the sorghum stem for stage 1.
Definition CanopyGenerator.h:792
+
SorghumCanopyParameters::sorghum_stage
int sorghum_stage
Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation ...
Definition CanopyGenerator.h:787
+
SorghumCanopyParameters::s1_leaf3_angle
float s1_leaf3_angle
Leaf3 vertical angle of rotation for stage 1.
Definition CanopyGenerator.h:816
+
SorghumCanopyParameters::s2_leaf_size1
helios::vec2 s2_leaf_size1
Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
Definition CanopyGenerator.h:836
+
SorghumCanopyParameters::s5_seed_texture_file
std::string s5_seed_texture_file
Texture map of the panicle for stage 5.
Definition CanopyGenerator.h:953
+
SorghumCanopyParameters::s4_panicle_size
helios::vec2 s4_panicle_size
Size of panicle in x- and y- directions for stage 4.
Definition CanopyGenerator.h:909
+
SorghumCanopyParameters::s2_leaf2_angle
float s2_leaf2_angle
Leaf2 vertical angle of rotation for stage 2.
Definition CanopyGenerator.h:854
+
SphericalCrownsCanopyParameters
Parameters defining the canopy with spherical crowns.
Definition CanopyGenerator.h:113
+
SphericalCrownsCanopyParameters::crown_radius
helios::vec3 crown_radius
Radius of the spherical crowns.
Definition CanopyGenerator.h:154
+
SphericalCrownsCanopyParameters::leaf_size
helios::vec2 leaf_size
Length of leaf in x- and y- directions (prior to rotation)
Definition CanopyGenerator.h:136
+
SphericalCrownsCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves. If left empty, no texture will be used.
Definition CanopyGenerator.h:142
+
SphericalCrownsCanopyParameters::leaf_color
helios::RGBcolor leaf_color
Leaf color if no texture map file is provided.
Definition CanopyGenerator.h:145
+
SphericalCrownsCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:163
+
SphericalCrownsCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition CanopyGenerator.h:160
+
SphericalCrownsCanopyParameters::SphericalCrownsCanopyParameters
SphericalCrownsCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:135
+
SphericalCrownsCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:139
+
SphericalCrownsCanopyParameters::leaf_angle_distribution
std::string leaf_angle_distribution
Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile",...
Definition CanopyGenerator.h:148
+
SphericalCrownsCanopyParameters::leaf_area_density
float leaf_area_density
One-sided leaf area density within spherical crowns.
Definition CanopyGenerator.h:151
+
SphericalCrownsCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition CanopyGenerator.h:157
+
SphericalCrownsCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:161
+
SphericalCrownsCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:229
+
SphericalCrownsCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:225
+
SplitGrapevineParameters
Parameters defining the grapevine canopy with a split (quad) trellis.
Definition CanopyGenerator.h:398
+
SplitGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:740
+
SplitGrapevineParameters::shoot_angle_base_spread
float shoot_angle_base_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition CanopyGenerator.h:428
+
SplitGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:717
+
SplitGrapevineParameters::shoot_angle_base
float shoot_angle_base
Average angle of the shoot at the base (shoot_angle_base=0 points shoots upward; shoot_angle_base=M_P...
Definition CanopyGenerator.h:426
+
SplitGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:736
+
SplitGrapevineParameters::SplitGrapevineParameters
SplitGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:670
+
SplitGrapevineParameters::cordon_spacing
float cordon_spacing
Spacing between two opposite cordons.
Definition CanopyGenerator.h:421
+
SplitGrapevineParameters::cordon_spacing_spread
float cordon_spacing_spread
Spread value for the cordon spacing. With any new canopy or plant generation, the cordon spacing woul...
Definition CanopyGenerator.h:423
+
SplitGrapevineParameters::shoot_angle_tip_spread
float shoot_angle_tip_spread
Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle ...
Definition CanopyGenerator.h:433
+
SplitGrapevineParameters::shoot_angle_tip
float shoot_angle_tip
Average angle of the shoot at the tip (shoot_angle=0 is a completely vertical shoot; shoot_angle=M_PI...
Definition CanopyGenerator.h:431
+
StrawberryParameters
Parameters defining the strawberry plant canopy.
Definition CanopyGenerator.h:626
+
StrawberryParameters::stem_subdivisions
int stem_subdivisions
Number of radial subdivisions for stem tubes.
Definition CanopyGenerator.h:661
+
StrawberryParameters::stems_per_plant
int stems_per_plant
Number of stems per plant.
Definition CanopyGenerator.h:664
+
StrawberryParameters::fruit_radius
float fruit_radius
Radius of strawberry fruit.
Definition CanopyGenerator.h:682
+
StrawberryParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:670
+
StrawberryParameters::StrawberryParameters
StrawberryParameters()
Default constructor.
Definition CanopyGenerator.cpp:1081
+
StrawberryParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition CanopyGenerator.h:688
+
StrawberryParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:679
+
StrawberryParameters::plant_height
float plant_height
Height of the plant.
Definition CanopyGenerator.h:676
+
StrawberryParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1119
+
StrawberryParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1193
+
StrawberryParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:652
+
StrawberryParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1197
+
StrawberryParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for strawberry fruit.
Definition CanopyGenerator.h:685
+
StrawberryParameters::clusters_per_stem
float clusters_per_stem
Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
Definition CanopyGenerator.h:691
+
StrawberryParameters::stem_radius
float stem_radius
Radius of stems.
Definition CanopyGenerator.h:667
+
StrawberryParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:655
+
StrawberryParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:673
+
StrawberryParameters::stem_color
helios::RGBcolor stem_color
Color of stems.
Definition CanopyGenerator.h:658
+
StrawberryParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:649
+
TomatoParameters
Parameters defining the tomato plant canopy.
Definition CanopyGenerator.h:565
+
TomatoParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition CanopyGenerator.h:600
+
TomatoParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1073
+
TomatoParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:588
+
TomatoParameters::fruit_color
helios::RGBcolor fruit_color
Color of tomato fruit.
Definition CanopyGenerator.h:618
+
TomatoParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:591
+
TomatoParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:612
+
TomatoParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition CanopyGenerator.h:621
+
TomatoParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition CanopyGenerator.h:597
+
TomatoParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:606
+
TomatoParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1008
+
TomatoParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:603
+
TomatoParameters::TomatoParameters
TomatoParameters()
Default constructor.
Definition CanopyGenerator.cpp:976
+
TomatoParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:594
+
TomatoParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1077
+
TomatoParameters::plant_height
float plant_height
Height of the plant.
Definition CanopyGenerator.h:609
+
TomatoParameters::fruit_radius
float fruit_radius
Radius of tomato fruit.
Definition CanopyGenerator.h:615
+
UnilateralGrapevineParameters
Parameters defining the grapevine canopy with unilateral trellis.
Definition CanopyGenerator.h:438
+
UnilateralGrapevineParameters::UnilateralGrapevineParameters
UnilateralGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:744
+
UnilateralGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:786
+
UnilateralGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:782
+
UnilateralGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:790
+
VSPGrapevineParameters
Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis.
Definition CanopyGenerator.h:373
+
VSPGrapevineParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:658
+
VSPGrapevineParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:662
+
VSPGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:666
+
VSPGrapevineParameters::VSPGrapevineParameters
VSPGrapevineParameters()
Default constructor.
Definition CanopyGenerator.cpp:620
+
WalnutCanopyParameters
Parameters defining the walnut tree canopy.
Definition CanopyGenerator.h:696
+
WalnutCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:759
+
WalnutCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for branch tubes.
Definition CanopyGenerator.h:731
+
WalnutCanopyParameters::plant_spacing
float plant_spacing
Spacing between adjacent plants along the row direction.
Definition CanopyGenerator.h:744
+
WalnutCanopyParameters::WalnutCanopyParameters
WalnutCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:1201
+
WalnutCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:1302
+
WalnutCanopyParameters::fruit_texture_file
std::string fruit_texture_file
Texture map for walnut fruit.
Definition CanopyGenerator.h:753
+
WalnutCanopyParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:722
+
WalnutCanopyParameters::fruit_subdivisions
uint fruit_subdivisions
Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
Definition CanopyGenerator.h:756
+
WalnutCanopyParameters::trunk_radius
float trunk_radius
Radius of trunk.
Definition CanopyGenerator.h:734
+
WalnutCanopyParameters::fruit_radius
float fruit_radius
Radius of walnuts.
Definition CanopyGenerator.h:750
+
WalnutCanopyParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:725
+
WalnutCanopyParameters::leaf_length
float leaf_length
Maximum length of leaves along midrib.
Definition CanopyGenerator.h:719
+
WalnutCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:1237
+
WalnutCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for wood/branches.
Definition CanopyGenerator.h:728
+
WalnutCanopyParameters::branch_length
helios::vec3 branch_length
Average length of branches in each recursive branch level. For example, the first (....
Definition CanopyGenerator.h:740
+
WalnutCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:1306
+
WalnutCanopyParameters::trunk_height
float trunk_height
Height of the trunk.
Definition CanopyGenerator.h:737
+
WalnutCanopyParameters::row_spacing
float row_spacing
Spacing between plant rows.
Definition CanopyGenerator.h:747
+
WhiteSpruceCanopyParameters
Parameters defining the white spruce.
Definition CanopyGenerator.h:489
+
WhiteSpruceCanopyParameters::needle_width
float needle_width
Width of needles.
Definition CanopyGenerator.h:512
+
WhiteSpruceCanopyParameters::needle_subdivisions
helios::int2 needle_subdivisions
Number of sub-division segments per needle.
Definition CanopyGenerator.h:518
+
WhiteSpruceCanopyParameters::readParametersFromXML
void readParametersFromXML(const pugi::xml_node canopy_node)
Sets canopy parameters from the given XML node.
Definition CanopyGenerator.cpp:884
+
WhiteSpruceCanopyParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:972
+
WhiteSpruceCanopyParameters::wood_texture_file
std::string wood_texture_file
Path to texture map file for trunks/branches.
Definition CanopyGenerator.h:524
+
WhiteSpruceCanopyParameters::plant_spacing
helios::vec2 plant_spacing
Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random...
Definition CanopyGenerator.h:557
+
WhiteSpruceCanopyParameters::needle_length
float needle_length
Length of needles.
Definition CanopyGenerator.h:515
+
WhiteSpruceCanopyParameters::trunk_height
float trunk_height
Distance between the ground and top of trunks.
Definition CanopyGenerator.h:530
+
WhiteSpruceCanopyParameters::level_spacing
float level_spacing
Vertical spacing between branching levels.
Definition CanopyGenerator.h:545
+
WhiteSpruceCanopyParameters::shoot_radius
float shoot_radius
Radius of shoot branches.
Definition CanopyGenerator.h:542
+
WhiteSpruceCanopyParameters::wood_subdivisions
int wood_subdivisions
Number of radial subdivisions for trunk/cordon/shoot tubes.
Definition CanopyGenerator.h:527
+
WhiteSpruceCanopyParameters::shoot_angle
float shoot_angle
Maximum shoot angle.
Definition CanopyGenerator.h:551
+
WhiteSpruceCanopyParameters::plant_count
helios::int2 plant_count
Number of crowns/plants in the x- and y-directions.
Definition CanopyGenerator.h:560
+
WhiteSpruceCanopyParameters::base_height
float base_height
Height at which branches start.
Definition CanopyGenerator.h:536
+
WhiteSpruceCanopyParameters::crown_radius
float crown_radius
Radius of the crown at the base.
Definition CanopyGenerator.h:539
+
WhiteSpruceCanopyParameters::needle_color
helios::RGBcolor needle_color
Color of needles.
Definition CanopyGenerator.h:521
+
WhiteSpruceCanopyParameters::trunk_radius
float trunk_radius
Radius of the trunk at the base.
Definition CanopyGenerator.h:533
+
WhiteSpruceCanopyParameters::buildPlant
void buildPlant(CanopyGenerator &canopy_generator, helios::vec3 origin) override
Makes the given Canopy generator build a single plant of our canopy type with our parameters at the g...
Definition CanopyGenerator.cpp:968
+
WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters
WhiteSpruceCanopyParameters()
Default constructor.
Definition CanopyGenerator.cpp:842
+
WhiteSpruceCanopyParameters::branches_per_level
int branches_per_level
Number of primary branches on the bottom level.
Definition CanopyGenerator.h:548
+
WhiteSpruceCanopyParameters::canopy_configuration
std::string canopy_configuration
Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arr...
Definition CanopyGenerator.h:554
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_canopy_generator_doc.html b/doc/html/_canopy_generator_doc.html index 4cd12354f..d197a3a06 100644 --- a/doc/html/_canopy_generator_doc.html +++ b/doc/html/_canopy_generator_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Canopy Generator Plugin Documentation
+
Canopy Generator Plugin Documentation

Table of Contents

-
@@ -901,11 +953,11 @@

}
- -
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503

Building an Individual Plant

Maximum flexibility in creating a canopy of plants is achieved by manually adding each individual plant. An example is given below to add a single grapevine plant on VSP trellis at the point (0,0,0).

@@ -928,7 +980,7 @@

canopygenerator.grapevineVSP( parameters, origin );
}
-
VSPGrapevineParameters
Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis.
Definition: CanopyGenerator.h:373
+
VSPGrapevineParameters
Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis.
Definition CanopyGenerator.h:373

The function grapevineVSP() could be called many times with different origin positions to create any canopy that is desired. Below, we will introduce functions that automatically generate a canopy according to the values set in the parameters structure.

Building a Canopy

@@ -949,7 +1001,7 @@

canopygenerator.buildCanopy( parameters );
}
-
VSPGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition: CanopyGenerator.cpp:666
+
VSPGrapevineParameters::buildCanopy
void buildCanopy(CanopyGenerator &canopy_generator) override
Makes the given Canopy generator build a canopy of our type with our parameters.
Definition CanopyGenerator.cpp:666

Retrieving UUIDs for Primitives

The UUIDs of primitives making up the canopy geometry are grouped into four different types of elements: trunks, branches/shoots, leaves, and fruit. Not all canopy types will have all four groups of elements, for example the homogeneous canopy has no trunks, branches, or fruit. The UUIDs can be retrieved for a given plant using the appropriate getter function, as detailed in the table below. Additionally, UUIDs can be retrieved for the ground surface.

@@ -984,7 +1036,7 @@

parameters.canopy_extent = make_vec2( 10.0, 10.0 );
canopygenerator.buildCanopy( parameters );
-
HomogeneousCanopyParameters
Parameters defining the homogeneous canopy.
Definition: CanopyGenerator.h:58
+
HomogeneousCanopyParameters
Parameters defining the homogeneous canopy.
Definition CanopyGenerator.h:58

Seeding the Random Number Generator

Random variability is added to plant geometries using a pseudorandom number generator. By default, the random number sequence is seeded based on the system clock, which produces different results for each run.

@@ -1013,7 +1065,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_carbohydrate_model_8cpp.html b/doc/html/_carbohydrate_model_8cpp.html index c72fd4d7b..9273d9a7f 100644 --- a/doc/html/_carbohydrate_model_8cpp.html +++ b/doc/html/_carbohydrate_model_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Variables
@@ -100,37 +112,37 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Variables

float C_molecular_wt = 12.01
float C_molecular_wt = 12.01
 
float rho_w = 675000
float rho_w = 675000
 
float wood_carbon_percentage = .5
float wood_carbon_percentage = .5
 
float SLA = 1.75e-2
float SLA = 1.75e-2
 
float leaf_carbon_percentage = .4444
float leaf_carbon_percentage = .4444
 
float total_flower_cost = 8.33e-3
float total_flower_cost = 8.33e-3
 
float flower_production_cost = total_flower_cost*.69
float flower_production_cost = total_flower_cost*.69
 
float flower_growth_respiration = total_flower_cost*.31
float flower_growth_respiration = total_flower_cost*.31
 
float nut_density = 525000
float nut_density = 525000
 
float percent_kernel = .27
float percent_kernel = .27
 
float percent_shell = .19
float percent_shell = .19
 
float percent_hull = .54
float percent_hull = .54
 
float kernel_carbon_percentage = .454
float kernel_carbon_percentage = .454
 
float shell_carbon_percentage = .470
float shell_carbon_percentage = .470
 
float hull_carbon_percentage = .494
float hull_carbon_percentage = .494
 
float nut_carbon_percentage = percent_kernel*kernel_carbon_percentage + percent_shell*shell_carbon_percentage + percent_hull*hull_carbon_percentage
float nut_carbon_percentage = percent_kernel*kernel_carbon_percentage + percent_shell*shell_carbon_percentage + percent_hull*hull_carbon_percentage
 

Detailed Description

@@ -400,7 +412,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_carbohydrate_model_8cpp_source.html b/doc/html/_carbohydrate_model_8cpp_source.html index 0f75b8bba..4f9d0d07d 100644 --- a/doc/html/_carbohydrate_model_8cpp_source.html +++ b/doc/html/_carbohydrate_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
CarbohydrateModel.cpp
@@ -459,27 +471,28 @@
379
380}
-
helios::Context::getTubeObjectSegmentVolume
float getTubeObjectSegmentVolume(uint ObjID, uint segment_index) const
get the volume of a segment within a Tube object
Definition: Context.cpp:8176
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition: Context.cpp:8172
-
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition: Context_data.cpp:2467
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition: Context.cpp:2907
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition: Context.cpp:7920
-
helios::Context::getPolymeshObjectVolume
float getPolymeshObjectVolume(uint ObjID) const
Get the volume of a Polygon Mesh object from the context.
Definition: Context.cpp:8282
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition: global.cpp:1943
- -
Phytomer::shoot_index
helios::int3 shoot_index
.x = index of phytomer along shoot, .y = current number of phytomers on parent shoot,...
Definition: PlantArchitecture.h:917
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
+
helios::Context::getTubeObjectSegmentVolume
float getTubeObjectSegmentVolume(uint ObjID, uint segment_index) const
get the volume of a segment within a Tube object
Definition Context.cpp:8176
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition Context.cpp:8172
+
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition Context_data.cpp:2467
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition Context.cpp:2907
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition Context.cpp:7920
+
helios::Context::getPolymeshObjectVolume
float getPolymeshObjectVolume(uint ObjID) const
Get the volume of a Polygon Mesh object from the context.
Definition Context.cpp:8282
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition global.cpp:1943
+ +
Phytomer::shoot_index
helios::int3 shoot_index
.x = index of phytomer along shoot, .y = current number of phytomers on parent shoot,...
Definition PlantArchitecture.h:917
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_choosing_c_u_d_a.html b/doc/html/_choosing_c_u_d_a.html index f57585a74..a5c727c8f 100644 --- a/doc/html/_choosing_c_u_d_a.html +++ b/doc/html/_choosing_c_u_d_a.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Choosing the right CUDA and OptiX version
+
Choosing the right CUDA and OptiX version

Picking the right version of the NVIDIA CUDA driver can be the most difficult part of the CUDA install. If you choose the wrong version, the resulting error messages may not always be clear. This guide will help you to choose the right CUDA version for your system. It may also be necessary to change your OptiX version if using an old GPU along with the radiation model. Fortunately, this is easy and will also be described below.

@@ -122,7 +134,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_context_8cpp.html b/doc/html/_context_8cpp.html index b884e2ad0..0b4ff15ef 100644 --- a/doc/html/_context_8cpp.html +++ b/doc/html/_context_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Context.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_context_8cpp_source.html b/doc/html/_context_8cpp_source.html index 69046a1d8..12fa1f646 100644 --- a/doc/html/_context_8cpp_source.html +++ b/doc/html/_context_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Context.cpp
@@ -97,6 +109,7 @@
17
18using namespace helios;
19
+
20Context::Context(){
21
22 //---- ALL DEFAULT VALUES ARE SET HERE ----//
@@ -121,14 +134,19 @@
41 currentObjectID = 1; //object ID of 0 is reserved for default object
42
43}
+
44
+
45void Context::seedRandomGenerator(uint seed){
46 generator.seed(seed);
47}
+
48
+
49std::minstd_rand0* Context::getRandomGenerator(){
50 return &generator;
51}
+
52
53void Context::addTexture( const char* texture_file ){
54 if( textures.find(texture_file)==textures.end() ){//texture has not already been added
@@ -161,6 +179,7 @@
81 }
82}
83
+
84Texture::Texture( const char* texture_file ){
85 filename = texture_file;
86
@@ -205,38 +224,55 @@
125
126
127}
+
128
+
129std::string Texture::getTextureFile() const{
130 return filename;
131}
+
132
+
133helios::int2 Texture::getImageResolution()const {
134 return image_resolution;
135}
+
136
+
137bool Texture::hasTransparencyChannel() const{
138 return hastransparencychannel;
139}
+
140
+
141const std::vector<std::vector<bool> >* Texture::getTransparencyData() const{
142 return &transparencydata;
143}
+
144
+
145float Texture::getSolidFraction() const{
146 return solidfraction;
147}
+
148
+
149void Context::markGeometryClean(){
150 isgeometrydirty = false;
151}
+
152
+
153void Context::markGeometryDirty(){
154 isgeometrydirty = true;
155}
+
156
+
157bool Context::isGeometryDirty() const{
158 return isgeometrydirty;
159}
+
160
161uint Primitive::getUUID() const{
162 return UUID;
@@ -372,11 +408,11 @@
292}
293
294RGBcolor Primitive::getColor() const{
-
295 return make_RGBcolor(color.r,color.g,color.b);
+
295 return make_RGBcolor(color.r,color.g,color.b);
296}
297
298RGBcolor Primitive::getColorRGB() const{
-
299 return make_RGBcolor(color.r,color.g,color.b);
+
299 return make_RGBcolor(color.r,color.g,color.b);
300}
301
302RGBAcolor Primitive::getColorRGBA() const{
@@ -1136,6 +1172,7 @@
1056
1057}
1058
+
1059void Context::setDate( int day, int month, int year ){
1060
1061 if( day<1 || day>31 ){
@@ -1149,7 +1186,9 @@
1069 sim_date = make_Date(day,month,year);
1070
1071}
+
1072
+
1073void Context::setDate(const Date &date ){
1074
1075 if( date.day<1 || date.day>31 ){
@@ -1163,7 +1202,9 @@
1083 sim_date = date;
1084
1085}
+
1086
+
1087void Context::setDate( int Julian_day, int year ){
1088
1089 if( Julian_day<1 || Julian_day>366 ){
@@ -1175,11 +1216,15 @@
1095 sim_date = CalendarDay( Julian_day, year );
1096
1097}
+
1098
+
1099Date Context::getDate() const{
1100 return sim_date;
1101}
+
1102
+
1103const char* Context::getMonthString() const{
1104 if( sim_date.month==1 ){
1105 return "JAN";
@@ -1208,15 +1253,21 @@
1128 }
1129
1130}
+
1131
+
1132int Context::getJulianDate() const{
1133 return JulianDay( sim_date.day, sim_date.month, sim_date.year );
1134}
+
1135
+
1136void Context::setTime( int minute, int hour ){
1137 setTime(0,minute,hour);
1138}
+
1139
+
1140void Context::setTime( int second, int minute, int hour ){
1141
1142 if( second<0 || second>59 ){
@@ -1230,7 +1281,9 @@
1150 sim_time = make_Time(hour,minute,second);
1151
1152}
+
1153
+
1154void Context::setTime(const Time &time ){
1155
1156 if( time.minute<0 || time.minute>59 ){
@@ -1242,23 +1295,33 @@
1162 sim_time = time;
1163
1164}
+
1165
+
1166Time Context::getTime() const{
1167 return sim_time;
1168}
+
1169
+
1170void Context::setLocation( const helios::Location &location ){
1171 sim_location = location;
1172}
+
1173
+
1174helios::Location Context::getLocation() const{
1175 return sim_location;
1176}
+
1177
+
1178float Context::randu(){
1179 return unif_distribution(generator);
1180}
+
1181
+
1182float Context::randu( float minrange, float maxrange ){
1183 if( maxrange<minrange ){
1184 helios_runtime_error("ERROR (Context::randu): Maximum value of range must be greater than minimum value of range.");
@@ -1269,7 +1332,9 @@
1189 return minrange+unif_distribution(generator)*(maxrange-minrange);
1190 }
1191}
+
1192
+
1193int Context::randu( int minrange, int maxrange ){
1194 if( maxrange<minrange ){
1195 helios_runtime_error("ERROR (Context::randu): Maximum value of range must be greater than minimum value of range.");
@@ -1277,34 +1342,48 @@
1197 }else if( maxrange==minrange ){
1198 return minrange;
1199 }else{
-
1200 return minrange+(int)lroundf(unif_distribution(generator)*float(maxrange-minrange));
+
1200 return minrange+(int)lroundf(unif_distribution(generator)*float(maxrange-minrange));
1201 }
1202}
+
1203
+
1204float Context::randn(){
1205 return norm_distribution(generator);
1206}
+
1207
+
1208float Context::randn( float mean, float stddev ){
1209 return mean+norm_distribution(generator)*fabsf(stddev);
1210}
+
1211
+
1212uint Context::addPatch(){
1213 return addPatch(make_vec3(0,0,0),make_vec2(1,1),make_SphericalCoord(0,0),make_RGBAcolor(0,0,0,1));
1214}
+
1215
+
1216uint Context::addPatch( const vec3& center, const vec2& size ){
1217 return addPatch(center,size,make_SphericalCoord(0,0),make_RGBAcolor(0,0,0,1));
1218}
+
1219
+
1220uint Context::addPatch( const vec3& center, const vec2& size, const SphericalCoord& rotation ){
1221 return addPatch(center,size,rotation,make_RGBAcolor(0,0,0,1));
1222}
+
1223
+
1224uint Context::addPatch( const vec3& center, const vec2& size, const SphericalCoord& rotation, const RGBcolor& color ){
1225 return addPatch(center,size,rotation,make_RGBAcolor(color,1));
1226}
+
1227
+
1228uint Context::addPatch( const vec3& center, const vec2& size, const SphericalCoord& rotation, const RGBAcolor& color ){
1229
1230 if( size.x==0 || size.y==0 ){
@@ -1333,7 +1412,9 @@
1253 currentUUID++;
1254 return currentUUID-1;
1255}
+
1256
+
1257uint Context::addPatch( const vec3& center, const vec2& size, const SphericalCoord& rotation, const char* texture_file ){
1258
1259 addTexture( texture_file );
@@ -1361,7 +1442,9 @@
1281 currentUUID++;
1282 return currentUUID-1;
1283}
+
1284
+
1285uint Context::addPatch( const vec3& center, const vec2& size, const SphericalCoord& rotation, const char* texture_file, const helios::vec2& uv_center, const helios::vec2& uv_size ){
1286
1287 if( size.x==0 || size.y==0 ){
@@ -1404,15 +1487,21 @@
1324 currentUUID++;
1325 return currentUUID-1;
1326}
+
1327
+
1328uint Context::addTriangle( const vec3& vertex0, const vec3& vertex1, const vec3& vertex2 ){
1329 return addTriangle( vertex0, vertex1, vertex2, make_RGBAcolor(0,0,0,1) );
1330}
+
1331
+
1332uint Context::addTriangle( const vec3& vertex0, const vec3& vertex1, const vec3& vertex2, const RGBcolor& color ){
1333 return addTriangle( vertex0, vertex1, vertex2, make_RGBAcolor(color,1) );
1334}
+
1335
+
1336uint Context::addTriangle( const vec3& vertex0, const vec3& vertex1, const vec3& vertex2, const RGBAcolor& color ){
1337
1338 auto* tri_new = (new Triangle( vertex0, vertex1, vertex2, color, 0, currentUUID ));
@@ -1426,7 +1515,9 @@
1346 currentUUID++;
1347 return currentUUID-1;
1348}
+
1349
+
1350uint Context::addTriangle( const helios::vec3& vertex0, const helios::vec3& vertex1, const helios::vec3& vertex2, const char* texture_file, const helios::vec2& uv0, const helios::vec2& uv1, const helios::vec2& uv2 ){
1351
1352 addTexture( texture_file );
@@ -1448,19 +1539,27 @@
1368 currentUUID++;
1369 return currentUUID-1;
1370}
+
1371
+
1372uint Context::addVoxel( const vec3& center, const vec3& size ){
1373 return addVoxel(center,size,0,make_RGBAcolor(0,0,0,1));
1374}
+
1375
+
1376uint Context::addVoxel( const vec3& center, const vec3& size, const float& rotation ){
1377 return addVoxel(center,size,rotation,make_RGBAcolor(0,0,0,1));
1378}
+
1379
+
1380uint Context::addVoxel( const vec3& center, const vec3& size, const float& rotation, const RGBcolor& color ){
1381 return addVoxel(center,size,rotation,make_RGBAcolor(color,1));
1382}
+
1383
+
1384uint Context::addVoxel( const vec3& center, const vec3& size, const float& rotation, const RGBAcolor& color ){
1385
1386 auto* voxel_new = (new Voxel( color, 0, currentUUID ));
@@ -1482,11 +1581,15 @@
1402 currentUUID++;
1403 return currentUUID-1;
1404}
+
1405
+
1406void Context::translatePrimitive(uint UUID, const vec3& shift ){
1407 getPrimitivePointer_private(UUID)->translate(shift);
1408}
+
1409
+
1410void Context::translatePrimitive( const std::vector<uint>& UUIDs, const vec3& shift ){
1411
1412 float T[16];
@@ -1496,11 +1599,15 @@
1416 getPrimitivePointer_private(UUID)->applyTransform(T);
1417 }
1418}
+
1419
+
1420void Context::rotatePrimitive(uint UUID, float rot, const char* axis ){
1421 getPrimitivePointer_private(UUID)->rotate(rot,axis);
1422}
+
1423
+
1424void Context::rotatePrimitive( const std::vector<uint>& UUIDs, float rot, const char* axis ){
1425
1426 if( rot==0 ){
@@ -1525,11 +1632,15 @@
1445 getPrimitivePointer_private(UUID)->applyTransform(T);
1446 }
1447}
+
1448
+
1449void Context::rotatePrimitive(uint UUID, float rot, const helios::vec3& axis ){
1450 getPrimitivePointer_private(UUID)->rotate(rot,axis);
1451}
+
1452
+
1453void Context::rotatePrimitive(const std::vector<uint>& UUIDs, float rot, const vec3 &axis ){
1454
1455 if( rot==0 ){
@@ -1546,11 +1657,15 @@
1466 getPrimitivePointer_private(UUID)->applyTransform(T);
1467 }
1468}
+
1469
+
1470void Context::rotatePrimitive( uint UUID, float rot, const helios::vec3& origin, const helios::vec3& axis ){
1471 getPrimitivePointer_private(UUID)->rotate(rot,origin,axis);
1472}
+
1473
+
1474void Context::rotatePrimitive(const std::vector<uint>& UUIDs, float rot, const helios::vec3& origin, const vec3 &axis ){
1475
1476 if( rot==0 ){
@@ -1567,7 +1682,9 @@
1487 getPrimitivePointer_private(UUID)->applyTransform(T);
1488 }
1489}
+
1490
+
1491void Context::scalePrimitive(uint UUID, const helios::vec3& S ){
1492
1493 if( !doesPrimitiveExist(UUID) ){
@@ -1582,13 +1699,17 @@
1502 getPrimitivePointer_private(UUID)->applyTransform(T);
1503
1504}
+
1505
+
1506void Context::scalePrimitive( const std::vector<uint>& UUIDs, const helios::vec3& S ){
1507 for( uint UUID : UUIDs ){
1508 scalePrimitive(UUID,S);
1509 }
1510}
+
1511
+
1512void Context::scalePrimitiveAboutPoint( uint UUID, const helios::vec3& S, const helios::vec3 point ){
1513
1514 if( !doesPrimitiveExist(UUID) ){
@@ -1600,19 +1721,25 @@
1520 getPrimitivePointer_private(UUID)->scale(S, point);
1521
1522}
+
1523
+
1524void Context::scalePrimitiveAboutPoint( const std::vector<uint>& UUIDs, const helios::vec3& S, const helios::vec3 point ){
1525 for( uint UUID : UUIDs ){
1526 scalePrimitiveAboutPoint(UUID,S,point);
1527 }
1528}
+
1529
+
1530void Context::deletePrimitive( const std::vector<uint>& UUIDs ){
1531 for( uint UUID : UUIDs){
1532 deletePrimitive( UUID );
1533 }
1534}
+
1535
+
1536void Context::deletePrimitive(uint UUID ){
1537
1538 if( primitives.find(UUID) == primitives.end() ){
@@ -1642,6 +1769,8 @@
1562
1563
1564}
+
+
1565std::vector<uint> Context::copyPrimitive(const std::vector<uint> &UUIDs ){
1566
1567 std::vector<uint> UUIDs_copy(UUIDs.size());
@@ -1654,7 +1783,9 @@
1574 return UUIDs_copy;
1575
1576}
+
1577
+
1578uint Context::copyPrimitive( uint UUID ){
1579
1580 if( primitives.find(UUID) == primitives.end() ){
@@ -1728,6 +1859,7 @@
1648 currentUUID++;
1649 return currentUUID-1;
1650}
+
1651
1652Primitive* Context::getPrimitivePointer_private( uint UUID ) const{
1653 if( primitives.find(UUID) == primitives.end() ){
@@ -1736,10 +1868,13 @@
1656 return primitives.at(UUID);
1657}
1658
+
1659bool Context::doesPrimitiveExist(uint UUID ) const{
1660 return primitives.find(UUID) != primitives.end();
1661}
+
1662
+
1663bool Context::doesPrimitiveExist( const std::vector<uint> &UUIDs ) const{
1664 if( UUIDs.empty() ){
1665 return false;
@@ -1751,6 +1886,7 @@
1671 }
1672 return true;
1673}
+
1674
1675Patch* Context::getPatchPointer_private(uint UUID ) const{
1676 if( primitives.find(UUID) == primitives.end() ){
@@ -1761,6 +1897,7 @@
1681 return dynamic_cast<Patch*>(primitives.at(UUID));
1682}
1683
+
1684helios::vec2 Context::getPatchSize( uint UUID ) const{
1685 if( primitives.find(UUID) == primitives.end() ){
1686 helios_runtime_error("ERROR (Context::getPatchSize): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
@@ -1769,7 +1906,9 @@
1689 }
1690 return dynamic_cast<Patch*>(primitives.at(UUID))->getSize();
1691}
+
1692
+
1693helios::vec3 Context::getPatchCenter( uint UUID ) const{
1694 if( primitives.find(UUID) == primitives.end() ){
1695 helios_runtime_error("ERROR (Context::getPatchCenter): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
@@ -1778,6 +1917,7 @@
1698 }
1699 return dynamic_cast<Patch*>(primitives.at(UUID))->getCenter();
1700}
+
1701
1702Triangle* Context::getTrianglePointer_private(uint UUID ) const{
1703 if( primitives.find(UUID) == primitives.end() ){
@@ -1788,6 +1928,7 @@
1708 return dynamic_cast<Triangle*>(primitives.at(UUID));
1709}
1710
+
1711helios::vec3 Context::getTriangleVertex( uint UUID, uint number ) const{
1712 if( primitives.find(UUID) == primitives.end() ){
1713 helios_runtime_error("ERROR (Context::getTriangleVertex): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
@@ -1798,7 +1939,9 @@
1718 }
1719 return dynamic_cast<Triangle*>(primitives.at(UUID))->getVertex( number );
1720}
+
1721
+
1722void Context::setTriangleVertices( uint UUID, const helios::vec3& vertex0, const helios::vec3& vertex1, const helios::vec3& vertex2 ) {
1723
1724 if( primitives.find(UUID) == primitives.end() ) {
@@ -1808,6 +1951,7 @@
1728 dynamic_cast<Triangle*>(primitives.at(UUID))->setVertices(vertex0, vertex1, vertex2);
1729
1730}
+
1731
1732Voxel* Context::getVoxelPointer_private(uint UUID ) const{
1733 if( primitives.find(UUID) == primitives.end() ){
@@ -1818,6 +1962,7 @@
1738 return dynamic_cast<Voxel*>(primitives.at(UUID));
1739}
1740
+
1741helios::vec3 Context::getVoxelSize( uint UUID ) const{
1742 if( primitives.find(UUID) == primitives.end() ){
1743 helios_runtime_error("ERROR (Context::getVoxelSize): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
@@ -1826,7 +1971,9 @@
1746 }
1747 return dynamic_cast<Voxel*>(primitives.at(UUID))->getSize();
1748}
+
1749
+
1750helios::vec3 Context::getVoxelCenter( uint UUID ) const{
1751 if( primitives.find(UUID) == primitives.end() ){
1752 helios_runtime_error("ERROR (Context::getVoxelCenter): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
@@ -1835,11 +1982,15 @@
1755 }
1756 return dynamic_cast<Voxel*>(primitives.at(UUID))->getCenter();
1757}
+
1758
+
1759uint Context::getPrimitiveCount() const{
1760 return primitives.size();
1761}
+
1762
+
1763std::vector<uint> Context::getAllUUIDs() const{
1764 std::vector<uint> UUIDs(primitives.size());
1765 size_t i=0;
@@ -1853,7 +2004,9 @@
1773 UUIDs.resize(i);
1774 return UUIDs;
1775}
+
1776
+
1777void Context::hidePrimitive( const std::vector<uint> &UUIDs ){
1778 for( uint UUID : UUIDs ){
1779 if( !doesPrimitiveExist(UUID) ){
@@ -1862,14 +2015,18 @@
1782 primitives.at(UUID)->ishidden = true;
1783 }
1784}
+
1785
+
1786bool Context::isPrimitiveHidden(uint UUID) const {
1787 if( !doesPrimitiveExist(UUID) ){
1788 helios_runtime_error("ERROR (Context::isPrimitiveHidden): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1789 }
1790 return primitives.at(UUID)->ishidden;
1791}
+
1792
+
1793void Context::cleanDeletedUUIDs( std::vector<uint> &UUIDs ) const {
1794 for (int i = UUIDs.size() - 1; i >= 0; i--) {
1795 if (!doesPrimitiveExist(UUIDs.at(i))) {
@@ -1877,7 +2034,9 @@
1797 }
1798 }
1799}
+
1800
+
1801void Context::cleanDeletedUUIDs( std::vector<std::vector<uint>> &UUIDs ) const{
1802 for( int j=UUIDs.size()-1; j>=0; j-- ){
1803 for( int i=UUIDs.at(j).size()-1; i>=0; i-- ){
@@ -1887,7 +2046,9 @@
1807 }
1808 }
1809}
+
1810
+
1811void Context::cleanDeletedUUIDs( std::vector<std::vector<std::vector<uint>>> &UUIDs ) const{
1812 for( int k=UUIDs.size()-1; k>=0; k-- ) {
1813 for (int j = UUIDs.at(k).size() - 1; j >= 0; j--) {
@@ -1899,7 +2060,9 @@
1819 }
1820 }
1821}
+
1822
+
1823void Context::addTimeseriesData(const char* label, float value, const Date &date, const Time &time ){
1824
1825 //floating point value corresponding to date and time
@@ -1962,7 +2125,9 @@
1882 helios_runtime_error("ERROR (Context::addTimeseriesData): Failed to insert timeseries data for unknown reason.");
1883
1884}
+
1885
+
1886void Context::setCurrentTimeseriesPoint(const char* label, uint index ){
1887 if( timeseries_data.find(label) == timeseries_data.end() ){ //does not exist
1888 helios_runtime_error("ERROR (setCurrentTimeseriesPoint): Timeseries variable `" + std::string(label) + "' does not exist.");
@@ -1970,7 +2135,9 @@
1890 setDate( queryTimeseriesDate( label, index ) );
1891 setTime( queryTimeseriesTime( label, index ) );
1892}
+
1893
+
1894float Context::queryTimeseriesData(const char* label, const Date &date, const Time &time ) const{
1895 if( timeseries_data.find(label) == timeseries_data.end() ){ //does not exist
1896 helios_runtime_error("ERROR (setCurrentTimeseriesData): Timeseries variable `" + std::string(label) + "' does not exist.");
@@ -2020,11 +2187,15 @@
1940 }
1941
1942}
+
1943
+
1944float Context::queryTimeseriesData( const char* label ) const{
1945 return queryTimeseriesData( label, sim_date, sim_time );
1946}
+
1947
+
1948float Context::queryTimeseriesData( const char* label, const uint index ) const{
1949
1950 if( timeseries_data.find(label) == timeseries_data.end() ){ //does not exist
@@ -2034,7 +2205,9 @@
1954 return timeseries_data.at(label).at(index);
1955
1956}
+
1957
+
1958Time Context::queryTimeseriesTime( const char* label, const uint index ) const{
1959
1960 if( timeseries_data.find(label) == timeseries_data.end() ){ //does not exist
@@ -2070,7 +2243,9 @@
1990 return make_Time(hour,minute,second);
1991
1992}
+
1993
+
1994Date Context::queryTimeseriesDate( const char* label, const uint index ) const{
1995
1996 if( timeseries_data.find(label) == timeseries_data.end() ){ //does not exist
@@ -2090,7 +2265,9 @@
2010 return Julian2Calendar(JD,year);
2011
2012}
+
2013
+
2014uint Context::getTimeseriesLength( const char* label ) const{
2015
2016 uint size = 0;
@@ -2102,7 +2279,9 @@
2022
2023 return size;
2024}
+
2025
+
2026bool Context::doesTimeseriesVariableExist( const char* label ) const{
2027
2028 if( timeseries_data.find(label) == timeseries_data.end() ) { //does not exist
@@ -2112,7 +2291,9 @@
2032 }
2033
2034}
+
2035
+
2036std::vector<std::string> Context::listTimeseriesVariables() const{
2037 std::vector<std::string> labels;
2038 labels.reserve( timeseries_data.size() );
@@ -2121,8 +2302,10 @@
2041 }
2042 return labels;
2043}
+
2044
2045
+
2046void Context::getDomainBoundingBox( vec2& xbounds, vec2& ybounds, vec2& zbounds ) const{
2047
2048 xbounds.x = 1e8;
@@ -2157,7 +2340,9 @@
2077 }
2078
2079}
+
2080
+
2081void Context::getDomainBoundingBox( const std::vector<uint>& UUIDs, vec2& xbounds, vec2& ybounds, vec2& zbounds ) const{
2082
2083 xbounds.x = 1e8;
@@ -2192,7 +2377,9 @@
2112 }
2113
2114}
+
2115
+
2116void Context::getDomainBoundingSphere( vec3& center, float& radius ) const{
2117
2118 vec2 xbounds, ybounds, zbounds;
@@ -2206,7 +2393,9 @@
2126
2127
2128}
+
2129
+
2130void Context::getDomainBoundingSphere( const std::vector<uint>& UUIDs, vec3& center, float& radius ) const{
2131
2132 vec2 xbounds, ybounds, zbounds;
@@ -2220,7 +2409,9 @@
2140
2141
2142}
+
2143
+
2144void Context::cropDomainX(const vec2 &xbounds ){
2145
2146 const std::vector<uint> &UUIDs_all = getAllUUIDs();
@@ -2243,7 +2434,9 @@
2163 }
2164
2165}
+
2166
+
2167void Context::cropDomainY(const vec2 &ybounds ){
2168
2169 const std::vector<uint> &UUIDs_all = getAllUUIDs();
@@ -2266,7 +2459,9 @@
2186 }
2187
2188}
+
2189
+
2190void Context::cropDomainZ(const vec2 &zbounds ){
2191
2192 const std::vector<uint> &UUIDs_all = getAllUUIDs();
@@ -2289,7 +2484,9 @@
2209 }
2210
2211}
+
2212
+
2213void Context::cropDomain( std::vector<uint> &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds ){
2214
2215 size_t delete_count = 0;
@@ -2314,37 +2511,51 @@
2234 cleanDeletedUUIDs( UUIDs );
2235
2236}
+
2237
+
2238void Context::cropDomain(const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds ){
2239 std::vector<uint> UUIDs = getAllUUIDs();
2240 cropDomain( UUIDs, xbounds, ybounds, zbounds );
2241}
+
2242
+
2243uint CompoundObject::getObjectID() const{
2244 return OID;
2245}
+
2246
+
2247helios::ObjectType CompoundObject::getObjectType() const{
2248 return type;
2249}
+
2250
+
2251uint CompoundObject::getPrimitiveCount() const{
2252 return UUIDs.size();
2253}
+
2254
2255
+
2256std::vector<uint> CompoundObject::getPrimitiveUUIDs() const{
2257
2258 return UUIDs;
2259
2260}
+
2261
+
2262bool CompoundObject::doesObjectContainPrimitive(uint UUID ){
2263
2264 return find(UUIDs.begin(),UUIDs.end(),UUID)!=UUIDs.end();
2265
2266}
+
2267
+
2268helios::vec3 CompoundObject::getObjectCenter() const{
2269
2270 vec2 xbounds, ybounds, zbounds;
@@ -2361,7 +2572,9 @@
2281
2282 return origin;
2283}
+
2284
+
2285float CompoundObject::getArea() const{
2286
2287 float area = 0.f;
@@ -2377,7 +2590,9 @@
2297 return area;
2298
2299}
+
2300
+
2301void CompoundObject::setColor( const helios::RGBcolor& a_color ){
2302 for( uint UUID : UUIDs){
2303
@@ -2387,7 +2602,9 @@
2307
2308 }
2309}
+
2310
+
2311void CompoundObject::setColor( const helios::RGBAcolor& a_color ){
2312 for( uint UUID : UUIDs){
2313
@@ -2397,7 +2614,9 @@
2317
2318 }
2319}
+
2320
+
2321void CompoundObject::overrideTextureColor(){
2322 for( uint UUID : UUIDs){
2323
@@ -2407,7 +2626,9 @@
2327
2328 }
2329}
+
2330
+
2331void CompoundObject::useTextureColor(){
2332 for( uint UUID : UUIDs){
2333
@@ -2417,7 +2638,9 @@
2337
2338 }
2339}
+
2340
+
2341bool CompoundObject::hasTexture() const{
2342 if( getTextureFile().empty() ){
2343 return false;
@@ -2425,11 +2648,15 @@
2345 return true;
2346 }
2347}
+
2348
+
2349std::string CompoundObject::getTextureFile() const{
2350 return texturefile;
2351}
+
2352
+
2353void CompoundObject::translate( const helios::vec3& shift ){
2354
2355 if( shift==nullorigin ){
@@ -2453,7 +2680,9 @@
2373 }
2374
2375}
+
2376
+
2377void CompoundObject::rotate(float rotation_radians, const char* rotation_axis_xyz_string ){
2378
2379 if(rotation_radians == 0 ){
@@ -2499,7 +2728,9 @@
2419 }
2420
2421}
+
2422
+
2423void CompoundObject::rotate(float rotation_radians, const helios::vec3& rotation_axis_vector ){
2424
2425 if(rotation_radians == 0 ){
@@ -2523,7 +2754,9 @@
2443 }
2444
2445}
+
2446
+
2447void CompoundObject::rotate(float rotation_radians, const helios::vec3& origin, const helios::vec3& rotation_axis_vector ){
2448
2449 if(rotation_radians == 0 ){
@@ -2547,15 +2780,21 @@
2467 }
2468
2469}
+
2470
+
2474
+
2478
+
2479void CompoundObject::scaleAboutPoint( const helios::vec3 &scale, const helios::vec3 &point ){
2480
2481 if( scale.x==1.f && scale.y==1.f && scale.z==1.f ){
@@ -2579,13 +2818,17 @@
2499 }
2500
2501}
+
2502
+
2503void CompoundObject::getTransformationMatrix( float (&T)[16] ) const{
2504 for( int i=0; i<16; i++ ){
2505 T[i]=transform[i];
2506 }
2507}
+
2508
+
2509void CompoundObject::setTransformationMatrix( float (&T)[16] ){
2510
2511 for( int i=0; i<16; i++ ){
@@ -2593,11 +2836,15 @@
2513 }
2514
2515}
+
2516
+
2517void CompoundObject::setPrimitiveUUIDs( const std::vector<uint> &a_UUIDs ){
2518 UUIDs = a_UUIDs;
2519}
+
2520
+
2521void CompoundObject::deleteChildPrimitive( uint UUID ){
2522 auto it = find( UUIDs.begin(), UUIDs.end(), UUID );
2523 if( it!=UUIDs.end() ){
@@ -2606,21 +2853,29 @@
2526 primitivesarecomplete=false;
2527 }
2528}
+
2529
+
2530void CompoundObject::deleteChildPrimitive( const std::vector<uint> &a_UUIDs ){
2531 for( uint UUID : a_UUIDs ){
2532 deleteChildPrimitive(UUID);
2533 }
2534}
+
2535
+
2536bool CompoundObject::arePrimitivesComplete() const{
2537 return primitivesarecomplete;
2538}
+
2539
+
2540bool Context::areObjectPrimitivesComplete( uint objID ) const{
2541 return getObjectPointer(objID)->arePrimitivesComplete();
2542}
+
2543
+
2544void Context::cleanDeletedObjectIDs( std::vector<uint> &objIDs ) const {
2545 for (int i = objIDs.size() - 1; i >= 0; i--) {
2546 if (!doesObjectExist(objIDs.at(i))) {
@@ -2628,7 +2883,9 @@
2548 }
2549 }
2550}
+
2551
+
2552void Context::cleanDeletedObjectIDs( std::vector<std::vector<uint>> &objIDs ) const{
2553 for( int j=objIDs.size()-1; j>=0; j-- ){
2554 for (int i = objIDs.at(j).size() - 1; i >= 0; i--) {
@@ -2638,7 +2895,9 @@
2558 }
2559 }
2560}
+
2561
+
2562void Context::cleanDeletedObjectIDs( std::vector<std::vector<std::vector<uint>>> &objIDs ) const{
2563 for( int k=objIDs.size()-1; k>=0; k-- ) {
2564 for (int j = objIDs.at(k).size() - 1; j >= 0; j--) {
@@ -2650,22 +2909,30 @@
2570 }
2571 }
2572}
+
2573
+
2574CompoundObject* Context::getObjectPointer( uint ObjID ) const{
2575 if( objects.find(ObjID) == objects.end() ){
2576 helios_runtime_error("ERROR (Context::getObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
2577 }
2578 return objects.at(ObjID);
2579}
+
2580
+
2581uint Context::getObjectCount() const{
2582 return objects.size();
2583}
+
2584
+
2585bool Context::doesObjectExist( const uint ObjID ) const{
2586 return objects.find(ObjID) != objects.end();
2587}
+
2588
+
2589std::vector<uint> Context::getAllObjectIDs() const{
2590 std::vector<uint> objIDs(objects.size());
2591 size_t i=0;
@@ -2679,13 +2946,17 @@
2599 objIDs.resize(i);
2600 return objIDs;
2601}
+
2602
+
2603void Context::deleteObject(const std::vector<uint> &ObjIDs ){
2604 for( uint ObjID : ObjIDs){
2605 deleteObject( ObjID );
2606 }
2607}
+
2608
+
2609void Context::deleteObject(uint ObjID ){
2610
2611 if( objects.find(ObjID) == objects.end() ){
@@ -2705,7 +2976,9 @@
2625 markGeometryDirty();
2626
2627}
+
2628
+
2629std::vector<uint> Context::copyObject(const std::vector<uint> &ObjIDs ){
2630
2631 std::vector<uint> ObjIDs_copy(ObjIDs.size());
@@ -2718,7 +2991,9 @@
2638 return ObjIDs_copy;
2639
2640}
+
2641
+
2642uint Context::copyObject(uint ObjID ){
2643
2644 if( objects.find(ObjID) == objects.end() ){
@@ -2826,7 +3101,9 @@
2746 currentObjectID++;
2747 return currentObjectID-1;
2748}
+
2749
+
2750std::vector<uint> Context::filterObjectsByData( const std::vector<uint> &IDs, const char* object_data, float threshold, const char* comparator) const{
2751
2752 std::vector<uint> output_object_IDs;
@@ -2913,84 +3190,116 @@
2833 return output_object_IDs;
2834
2835}
+
2836
+
2837void Context::translateObject(uint ObjID, const vec3& shift ){
2838 getObjectPointer(ObjID)->translate(shift);
2839}
+
2840
+
2841void Context::translateObject( const std::vector<uint>& ObjIDs, const vec3& shift ){
2842 for( uint ID : ObjIDs){
2843 getObjectPointer(ID)->translate(shift);
2844 }
2845}
+
2846
+
2847void Context::rotateObject(uint ObjID, float rotation_radians, const char* rotation_axis_xyz ){
2848 getObjectPointer(ObjID)->rotate(rotation_radians, rotation_axis_xyz);
2849}
+
2850
+
2851void Context::rotateObject(const std::vector<uint>& ObjIDs, float rotation_radians, const char* rotation_axis_xyz ){
2852 for( uint ID : ObjIDs){
2853 getObjectPointer(ID)->rotate(rotation_radians, rotation_axis_xyz);
2854 }
2855}
+
2856
+
2857void Context::rotateObject(uint ObjID, float rotation_radians, const vec3& rotation_axis_vector ){
2858 getObjectPointer(ObjID)->rotate(rotation_radians, rotation_axis_vector);
2859}
+
2860
+
2861void Context::rotateObject(const std::vector<uint>& ObjIDs, float rotation_radians, const vec3& rotation_axis_vector ){
2862 for( uint ID : ObjIDs){
2863 getObjectPointer(ID)->rotate(rotation_radians, rotation_axis_vector);
2864 }
2865}
+
2866
+
2867void Context::rotateObject(uint ObjID, float rotation_radians, const vec3& rotation_origin, const vec3& rotation_axis_vector ){
2868 getObjectPointer(ObjID)->rotate(rotation_radians, rotation_origin, rotation_axis_vector);
2869}
+
2870
+
2871void Context::rotateObject(const std::vector<uint>& ObjIDs, float rotation_radians, const vec3& rotation_origin, const vec3& rotation_axis_vector ){
2872 for( uint ID : ObjIDs){
2873 getObjectPointer(ID)->rotate(rotation_radians, rotation_origin, rotation_axis_vector);
2874 }
2875}
+
2876
+
2877void Context::scaleObject( uint ObjID, const helios::vec3 &scalefact ){
2878 getObjectPointer(ObjID)->scale(scalefact);
2879}
+
2880
+
2881void Context::scaleObject( const std::vector<uint>& ObjIDs, const helios::vec3 &scalefact ){
2882 for( uint ID : ObjIDs){
2883 getObjectPointer(ID)->scale(scalefact);
2884 }
2885}
+
2886
+
2887void Context::scaleObjectAboutCenter( uint ObjID, const helios::vec3 &scalefact ){
2888 getObjectPointer(ObjID)->scaleAboutCenter(scalefact);
2889}
+
2890
+
2891void Context::scaleObjectAboutCenter( const std::vector<uint>& ObjIDs, const helios::vec3 &scalefact ){
2892 for( uint ID : ObjIDs){
2893 getObjectPointer(ID)->scaleAboutCenter(scalefact);
2894 }
2895}
+
2896
+
2897void Context::scaleObjectAboutPoint( uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point ){
2898 getObjectPointer(ObjID)->scaleAboutPoint(scalefact, point);
2899}
+
2900
+
2901void Context::scaleObjectAboutPoint( const std::vector<uint>& ObjIDs, const helios::vec3 &scalefact, const helios::vec3 &point ){
2902 for( uint ID : ObjIDs){
2903 getObjectPointer(ID)->scaleAboutPoint(scalefact, point);
2904 }
2905}
+
2906
+
2907std::vector<uint> Context::getObjectPrimitiveUUIDs( uint ObjID ) const{
2908
2909 const std::vector<uint> ObjIDs = {ObjID};
2910 return getObjectPrimitiveUUIDs(ObjIDs);
2911
2912}
+
2913
+
2914std::vector<uint> Context::getObjectPrimitiveUUIDs( const std::vector<uint> &ObjIDs ) const{
2915
2916 std::vector<uint> output_UUIDs;
@@ -3002,7 +3311,9 @@
2922 }
2923 return output_UUIDs;
2924}
+
2925
+
2926std::vector<uint> Context::getObjectPrimitiveUUIDs( const std::vector<std::vector<uint> > &ObjIDs ) const{
2927
2928 std::vector<uint> output_UUIDs;
@@ -3016,11 +3327,15 @@
2936 }
2937 return output_UUIDs;
2938}
+
2939
+
2940helios::ObjectType Context::getObjectType( uint ObjID ) const{
2941 return getObjectPointer(ObjID)->getObjectType();
2942}
+
2943
+
2944float Context::getTileObjectAreaRatio(uint ObjectID) const{
2945
2946 if( getObjectPointer(ObjectID)->getObjectType() != OBJECT_TYPE_TILE )
@@ -3048,7 +3363,9 @@
2968
2969 }
2970}
+
2971
+
2972std::vector<float> Context::getTileObjectAreaRatio(const std::vector<uint> &ObjectIDs) const {
2973
2974 std::vector<float> AreaRatios(ObjectIDs.size());
@@ -3058,7 +3375,9 @@
2978
2979 return AreaRatios;
2980}
+
2981
+
2982void Context::setTileObjectSubdivisionCount(const std::vector<uint> &ObjectIDs, const int2 &new_subdiv)
2983{
2984
@@ -3187,7 +3506,9 @@
3107 deleteObject(object_templates);
3108
3109}
+
3110
+
3111void Context::setTileObjectSubdivisionCount(const std::vector<uint> &ObjectIDs, float area_ratio)
3112{
3113
@@ -3375,7 +3696,9 @@
3295 deleteObject(object_templates);
3296
3297}
+
3298
+
3299Tile::Tile(uint a_OID, const std::vector<uint> &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context) {
3300
3301 makeIdentityMatrix( transform );
@@ -3388,21 +3711,27 @@
3308 context = a_context;
3309
3310}
+
3311
+
3312Tile* Context::getTileObjectPointer(uint ObjID ) const{
3313 if( objects.find(ObjID) == objects.end() ){
3314 helios_runtime_error("ERROR (Context::getTileObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
3315 }
3316 return dynamic_cast<Tile*>(objects.at(ObjID));
3317}
+
3318
+
3319helios::vec2 Tile::getSize() const{
3320 const std::vector<vec3> &vertices = getVertices();
3321 float l = (vertices.at(1)-vertices.at(0)).magnitude();
3322 float w = (vertices.at(3)-vertices.at(0)).magnitude();
3323 return make_vec2(l,w);
3324}
+
3325
+
3326vec3 Tile::getCenter() const{
3327
3328 vec3 center;
@@ -3418,17 +3747,23 @@
3338 return center;
3339
3340}
+
3341
3342
+
3343helios::int2 Tile::getSubdivisionCount() const{
3344 return subdiv;
3345}
+
3346
+
3347void Tile::setSubdivisionCount( const helios::int2 &a_subdiv ){
3348 subdiv = a_subdiv;
3349}
+
3350
3351
+
3352std::vector<helios::vec3> Tile::getVertices() const{
3353
3354 std::vector<helios::vec3> vertices;
@@ -3461,19 +3796,25 @@
3381 return vertices;
3382
3383}
+
3384
+
3385vec3 Tile::getNormal() const{
3386
3387 return context->getPrimitiveNormal( UUIDs.front() );
3388
3389}
+
3390
+
3391std::vector<helios::vec2> Tile::getTextureUV() const{
3392
3393 return { make_vec2(0,0), make_vec2(1,0), make_vec2(1,1), make_vec2(0,1) };
3394
3395}
+
3396
+
3397Sphere::Sphere(uint a_OID, const std::vector<uint> &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context) {
3398
3399 makeIdentityMatrix( transform );
@@ -3486,14 +3827,18 @@
3406 context = a_context;
3407
3408}
+
3409
+
3410Sphere* Context::getSphereObjectPointer(uint ObjID ) const{
3411 if( objects.find(ObjID) == objects.end() ){
3412 helios_runtime_error("ERROR (Context::getSphereObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
3413 }
3414 return dynamic_cast<Sphere*>(objects.at(ObjID));
3415}
+
3416
+
3417helios::vec3 Sphere::getRadius() const{
3418
3419 vec3 n0(0,0,0);
@@ -3515,7 +3860,9 @@
3435 return radii;
3436
3437}
+
3438
+
3439vec3 Sphere::getCenter() const{
3440
3441 vec3 center;
@@ -3531,20 +3878,28 @@
3451 return center;
3452
3453}
+
3454
+
3455uint Sphere::getSubdivisionCount() const{
3456 return subdiv;
3457}
+
3458
+
3459void Sphere::setSubdivisionCount( uint a_subdiv ){
3460 subdiv = a_subdiv;
3461}
+
3462
+
3463float Sphere::getVolume() const{
3464 const vec3 &radii = getRadius();
3465 return 4.f/3.f * M_PI * radii.x * radii.y * radii.z;
3466}
+
3467
+
3468Tube::Tube(uint a_OID, const std::vector<uint> &a_UUIDs, const std::vector<vec3> &a_nodes, const std::vector<float> &a_radius, const std::vector<helios::RGBcolor> &a_colors, const std::vector<std::vector<helios::vec3>> &a_triangle_vertices,
3469 uint a_subdiv, const char *a_texturefile, helios::Context *a_context) {
3470
@@ -3562,14 +3917,18 @@
3482 context = a_context;
3483
3484}
+
3485
+
3486Tube* Context::getTubeObjectPointer(uint ObjID ) const{
3487 if( objects.find(ObjID) == objects.end() ){
3488 helios_runtime_error("ERROR (Context::getTubeObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
3489 }
3490 return dynamic_cast<Tube*>(objects.at(ObjID));
3491}
+
3492
+
3493std::vector<helios::vec3> Tube::getNodes() const{
3494
3495 std::vector<vec3> nodes_T;
@@ -3584,7 +3943,9 @@
3504 return nodes_T;
3505
3506}
+
3507
+
3508std::vector<float> Tube::getNodeRadii() const{
3509 std::vector<float> radius_T;
3510 radius_T.resize(radius.size());
@@ -3601,19 +3962,27 @@
3521 }
3522 return radius_T;
3523}
+
3524
+
3525std::vector<helios::RGBcolor> Tube::getNodeColors() const{
3526 return colors;
3527}
+
3528
+
3529std::vector<std::vector<helios::vec3>> Tube::getTriangleVertices() const{
3530 return triangle_vertices;
3531}
+
3532
+
3533uint Tube::getSubdivisionCount() const{
3534 return subdiv;
3535}
+
3536
+
3537float Tube::getLength() const{
3538
3539 float length = 0.f;
@@ -3623,7 +3992,9 @@
3543 return length;
3544
3545}
+
3546
+
3547float Tube::getVolume() const{
3548
3549 const std::vector<float> &radii = getNodeRadii();
@@ -3637,7 +4008,9 @@
3557
3558 return volume;
3559}
+
3560
+
3561float Tube::getSegmentVolume( uint segment_index ) const{
3562
3563 if( segment_index>=nodes.size()-1 ){
@@ -3651,7 +4024,9 @@
3571
3572 return volume;
3573}
+
3574
+
3575void Tube::appendTubeSegment( const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color ){
3576
3577 //\todo This is a computationally inefficient method for appending the tube, but it ensures that there is no twisting of the tube relative to the previous tube segments.
@@ -3768,7 +4143,9 @@
3688 updateTriangleVertices();
3689
3690}
+
3691
+
3692void Tube::appendTubeSegment(const helios::vec3 &node_position, float node_radius, const char* texturefile, const helios::vec2 &textureuv_ufrac) {
3693
3694 //\todo This is a computationally inefficient method for appending the tube, but it ensures that there is no twisting of the tube relative to the previous tube segments.
@@ -3902,7 +4279,9 @@
3822
3823 updateTriangleVertices();
3824}
+
3825
+
3826void Tube::scaleTubeGirth( float S ){
3827
3828 for( int segment=0; segment<triangle_vertices.size(); segment++ ){
@@ -3922,7 +4301,9 @@
3842 updateTriangleVertices();
3843
3844}
+
3845
+
3846void Tube::setTubeRadii( const std::vector<float> &node_radii ){
3847
3848 if( node_radii.size() != nodes.size() ){
@@ -3945,7 +4326,9 @@
3865
3866 updateTriangleVertices();
3867}
+
3868
+
3869void Tube::scaleTubeLength( float S ){
3870
3871 for( int segment=0; segment<triangle_vertices.size()-1; segment++ ){
@@ -3971,7 +4354,9 @@
3891 updateTriangleVertices();
3892
3893}
+
3894
+
3895void Tube::setTubeNodes( const std::vector<helios::vec3> &node_xyz ){
3896
3897 if( node_xyz.size() != nodes.size() ){
@@ -3992,6 +4377,7 @@
3912 updateTriangleVertices();
3913
3914}
+
3915
3916void Tube::updateTriangleVertices(){
3917
@@ -4018,6 +4404,7 @@
3938
3939}
3940
+
3941Box::Box(uint a_OID, const std::vector<uint> &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context) {
3942
3943 makeIdentityMatrix( transform );
@@ -4030,14 +4417,18 @@
3950 context = a_context;
3951
3952}
+
3953
+
3954Box* Context::getBoxObjectPointer(uint ObjID ) const{
3955 if( objects.find(ObjID) == objects.end() ){
3956 helios_runtime_error("ERROR (Context::getBoxObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
3957 }
3958 return dynamic_cast<Box*>(objects.at(ObjID));
3959}
+
3960
+
3961vec3 Box::getSize() const{
3962
3963 vec3 n0(0,0,0), nx(1,0,0), ny(0,1,0), nz(0,0,1);
@@ -4056,7 +4447,9 @@
3976 return make_vec3( x, y, z );
3977
3978}
+
3979
+
3980vec3 Box::getCenter() const{
3981
3982 vec3 center;
@@ -4072,20 +4465,28 @@
3992 return center;
3993
3994}
+
3995
+
3996helios::int3 Box::getSubdivisionCount() const{
3997 return subdiv;
3998}
+
3999
+
4000void Box::setSubdivisionCount( const helios::int3 &a_subdiv ){
4001 subdiv = a_subdiv;
4002}
+
4003
+
4004float Box::getVolume() const{
4005 const vec3 &size = getSize();
4006 return size.x * size.y * size.z;
4007}
+
4008
+
4009Disk::Disk(uint a_OID, const std::vector<uint> &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context) {
4010
4011 makeIdentityMatrix( transform );
@@ -4098,14 +4499,18 @@
4018 context = a_context;
4019
4020}
+
4021
+
4022Disk* Context::getDiskObjectPointer(uint ObjID ) const{
4023 if( objects.find(ObjID) == objects.end() ){
4024 helios_runtime_error("ERROR (Context::getDiskObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
4025 }
4026 return dynamic_cast<Disk*>(objects.at(ObjID));
4027}
+
4028
+
4029vec2 Disk::getSize() const{
4030
4031 vec3 n0(0,0,0), nx(1,0,0), ny(0,1,0);
@@ -4121,7 +4526,9 @@
4041 return make_vec2(x,y);
4042
4043}
+
4044
+
4045vec3 Disk::getCenter() const{
4046
4047 vec3 center;
@@ -4137,15 +4544,21 @@
4057 return center;
4058
4059}
+
4060
+
4061int2 Disk::getSubdivisionCount() const{
4062 return subdiv;
4063}
+
4064
+
4065void Disk::setSubdivisionCount(int2 a_subdiv ){
4066 subdiv = a_subdiv;
4067}
+
4068
+
4069Polymesh::Polymesh(uint a_OID, const std::vector<uint> &a_UUIDs, const char *a_texturefile, helios::Context *a_context) {
4070
4071 makeIdentityMatrix( transform );
@@ -4157,14 +4570,18 @@
4077 context = a_context;
4078
4079}
+
4080
+
4081Polymesh* Context::getPolymeshObjectPointer(uint ObjID ) const{
4082 if( objects.find(ObjID) == objects.end() ){
4083 helios_runtime_error("ERROR (Context::getPolymeshObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
4084 }
4085 return dynamic_cast<Polymesh*>(objects.at(ObjID));
4086}
+
4087
+
4088float Polymesh::getVolume() const{
4089 float volume = 0.f;
4090 for (uint UUID : UUIDs ) {
@@ -4183,7 +4600,9 @@
4103 }
4104 return std::abs(volume);
4105}
+
4106
+
4107Cone::Cone(uint a_OID, const std::vector<uint> &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0,
4108 float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context) {
4109
@@ -4199,14 +4618,18 @@
4119 radii = {a_radius0, a_radius1};
4120
4121}
+
4122
+
4123Cone* Context::getConeObjectPointer( const uint ObjID ) const{
4124 if( objects.find(ObjID) == objects.end() ){
4125 helios_runtime_error("ERROR (Context::getConeObjectPointer): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
4126 }
4127 return dynamic_cast<Cone*>(objects.at(ObjID));
4128}
+
4129
+
4130std::vector<helios::vec3> Cone::getNodeCoordinates() const{
4131
4132 std::vector<vec3> nodes_T;
@@ -4220,7 +4643,9 @@
4140
4141 return nodes_T;
4142}
+
4143
+
4144helios::vec3 Cone::getNodeCoordinate(int node_index ) const{
4145
4146 if(node_index < 0 || node_index > 1 ){
@@ -4235,11 +4660,15 @@
4155
4156 return node_T;
4157}
+
4158
+
4159std::vector<float> Cone::getNodeRadii() const{
4160 return radii;
4161}
+
4162
+
4163float Cone::getNodeRadius( int node_index ) const{
4164 if(node_index < 0 || node_index > 1 ){
4165 helios_runtime_error("ERROR (Cone::getNodeRadius): node number must be 0 or 1.");
@@ -4247,22 +4676,28 @@
4167
4168 return radii.at(node_index);
4169}
+
4170
+
4171uint Cone::getSubdivisionCount() const{
4172 return subdiv;
4173}
+
4174
+
4175void Cone::setSubdivisionCount( uint a_subdiv ){
4176 subdiv = a_subdiv;
4177}
+
4178
+
4179helios::vec3 Cone::getAxisUnitVector() const{
4180
4181 std::vector<vec3> nodes_T;
4182 nodes_T.resize( 2 );
4183
4184 for( uint i=0; i<2; i++ ){
-
4185 nodes_T.at(i).x = transform[0] * nodes.at(i).x + transform[1] * nodes.at(i).y + transform[2] * nodes.at(i).z + transform[3];
+
4185 nodes_T.at(i).x = transform[0] * nodes.at(i).x + transform[1] * nodes.at(i).y + transform[2] * nodes.at(i).z + transform[3];
4186 nodes_T.at(i).y = transform[4] * nodes.at(i).x + transform[5] * nodes.at(i).y + transform[6] * nodes.at(i).z + transform[7];
4187 nodes_T.at(i).z = transform[8] * nodes.at(i).x + transform[9] * nodes.at(i).y + transform[10] * nodes.at(i).z + transform[11];
4188 }
@@ -4273,7 +4708,9 @@
4193
4194 return axis_unit_vector;
4195}
+
4196
+
4197float Cone::getLength() const{
4198
4199 std::vector<vec3> nodes_T;
@@ -4288,7 +4725,9 @@
4208 float length = powf(powf(nodes_T.at(1).x - nodes_T.at(0).x, 2) + powf(nodes_T.at(1).y - nodes_T.at(0).y, 2) + powf(nodes_T.at(1).z - nodes_T.at(0).z, 2), 0.5);
4209 return length;
4210}
+
4211
+
4212void Cone::scaleLength( float S ){
4213
4214 //get the nodes and radii of the nodes with transformation matrix applied
@@ -4337,7 +4776,9 @@
4257 context->getConeObjectPointer(OID)->translate(nodes_T.at(0));
4258
4259}
+
4260
+
4261void Cone::scaleGirth( float S ){
4262
4263 //get the nodes and radii of the nodes with transformation matrix applied
@@ -4378,7 +4819,9 @@
4298 radii.at(1) *= S;
4299
4300}
+
4301
+
4302float Cone::getVolume() const{
4303 float r0 = getNodeRadius(0);
4304 float r1 = getNodeRadius(1);
@@ -4386,25 +4829,35 @@
4306
4307 return M_PI * h / 3.f * (r0*r0 + r0*r1 + r1*r1);
4308}
+
4309
+
4310uint Context::addSphereObject(uint Ndivs, const vec3 &center, float radius ){
4311 return addSphereObject(Ndivs,center,{radius,radius,radius},{0.f,0.75f,0.f}); //Default color is green
4312}
+
4313
+
4314uint Context::addSphereObject(uint Ndivs, const vec3 &center, float radius, const RGBcolor &color ){
4315 return addSphereObject(Ndivs,center,{radius,radius,radius},color);
4316}
+
4317
+
4318uint Context::addSphereObject(uint Ndivs, const vec3 &center, float radius, const char* texturefile ){
4319 return addSphereObject(Ndivs,center,{radius,radius,radius},texturefile);
4320}
+
4321
+
4322uint Context::addSphereObject(uint Ndivs, const vec3 &center, const vec3 &radius ){
4323
4324 return addSphereObject(Ndivs,center,radius,{0.f,0.75f,0.f}); //Default color is green
4325
4326}
+
4327
+
4328uint Context::addSphereObject(uint Ndivs, const vec3 &center, const vec3 &radius, const RGBcolor &color ){
4329
4330 if( radius.x<=0.f || radius.y<=0.f || radius.z<=0.f ){
@@ -4489,7 +4942,9 @@
4409 return currentObjectID-1;
4410
4411}
+
4412
+
4413uint Context::addSphereObject(uint Ndivs, const vec3 &center, const vec3 &radius, const char* texturefile ){
4414
4415 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -4626,14 +5081,18 @@
4546 return currentObjectID-1;
4547
4548}
+
4549
+
4550uint Context::addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv) {
4551
4552 RGBcolor color = make_RGBcolor(0.f,0.75f,0.f); //Default color is green
4553
4554 return addTileObject(center,size,rotation,subdiv,color);
4555}
+
4556
+
4557uint Context::addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const RGBcolor &color ){
4558
4559 if( size.x==0 || size.y==0 ){
@@ -4698,7 +5157,9 @@
4618 return currentObjectID-1;
4619
4620}
+
4621
+
4622uint Context::addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const char* texturefile ){
4623
4624 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -4804,7 +5265,9 @@
4724 return currentObjectID-1;
4725
4726}
+
4727
+
4728uint Context::addTubeObject(uint radial_subdivisions, const std::vector<vec3> &nodes, const std::vector<float> &radius ){
4729
4730 uint node_count = nodes.size();
@@ -4819,7 +5282,9 @@
4739 return addTubeObject(radial_subdivisions, nodes, radius, color);
4740
4741}
+
4742
+
4743uint Context::addTubeObject(uint radial_subdivisions, const std::vector<vec3> &nodes, const std::vector<float> &radius, const std::vector<RGBcolor> &color ){
4744
4745 const uint node_count = nodes.size();
@@ -4933,7 +5398,9 @@
4853 return currentObjectID-1;
4854
4855}
+
4856
+
4857uint Context::addTubeObject(uint radial_subdivisions, const std::vector<vec3> &nodes, const std::vector<float> &radius, const char* texturefile ){
4858 size_t node_count = nodes.size();
4859 std::vector<float> textureuv_ufrac(node_count);
@@ -4943,7 +5410,9 @@
4863
4864 return addTubeObject( radial_subdivisions, nodes, radius, texturefile, textureuv_ufrac );
4865}
+
4866
+
4867uint Context::addTubeObject(uint radial_subdivisions, const std::vector<vec3> &nodes, const std::vector<float> &radius, const char* texturefile, const std::vector<float> &textureuv_ufrac) {
4868 if (!validateTextureFileExtenstion(texturefile)) {
4869 helios_runtime_error("ERROR (Context::addTubeObject): Texture file " + std::string(texturefile) + " is not PNG or JPEG format.");
@@ -5076,22 +5545,30 @@
4996
4997 return currentObjectID - 1;
4998}
+
4999
+
5000uint Context::addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv ){
5001
5002 RGBcolor color = make_RGBcolor(0.f,0.75f,0.f); //Default color is green
5003
5004 return addBoxObject(center,size,subdiv,color,false);
5005}
+
5006
+
5007uint Context::addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color ){
5008 return addBoxObject(center,size,subdiv,color,false);
5009}
+
5010
+
5011uint Context::addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv, const char* texturefile ){
5012 return addBoxObject(center,size,subdiv,texturefile,false);
5013}
+
5014
+
5015uint Context::addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color, bool reverse_normals ){
5016
5017 if( size.x<=0 || size.y<=0 || size.z<=0 ){
@@ -5212,7 +5689,9 @@
5132 return currentObjectID-1;
5133
5134}
+
5135
+
5136uint Context::addBoxObject(vec3 center, const vec3 &size, const int3 &subdiv, const char* texturefile, bool reverse_normals ){
5137
5138 if( !validateTextureFileExtenstion(texturefile) ){
@@ -5332,31 +5811,45 @@
5252
5253
5254}
+
5255
+
5256uint Context::addDiskObject(uint Ndivs, const vec3 &center, const vec2 &size ){
5257 return addDiskObject(make_int2(Ndivs,1),center,size,make_SphericalCoord(0,0),make_RGBAcolor(1,0,0,1));
5258}
+
5259
+
5260uint Context::addDiskObject(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation ){
5261 return addDiskObject(make_int2(Ndivs,1),center,size,rotation,make_RGBAcolor(1,0,0,1));
5262}
+
5263
+
5264uint Context::addDiskObject(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color ){
5265 return addDiskObject(make_int2(Ndivs,1),center,size,rotation,make_RGBAcolor(color,1));
5266}
+
5267
+
5268uint Context::addDiskObject(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBAcolor &color ){
5269 return addDiskObject(make_int2(Ndivs,1),center,size,rotation,color);
5270}
+
5271
+
5272uint Context::addDiskObject(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const char* texture_file ){
5273 return addDiskObject(make_int2(Ndivs,1),center,size,rotation,texture_file);
5274}
+
5275
+
5276uint Context::addDiskObject(const int2 &Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color ){
5277 return addDiskObject(Ndivs,center,size,rotation,make_RGBAcolor(color,1));
5278}
+
5279
+
5280uint Context::addDiskObject(const int2 &Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBAcolor &color ){
5281
5282 std::vector<uint> UUID;
@@ -5414,7 +5907,9 @@
5334 return currentObjectID-1;
5335
5336}
+
5337
+
5338uint Context::addDiskObject(const int2 &Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const char* texturefile ){
5339
5340 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -5475,7 +5970,9 @@
5395 return currentObjectID-1;
5396
5397}
+
5398
+
5399uint Context::addPolymeshObject(const std::vector<uint> &UUIDs ){
5400
5401 if( UUIDs.empty() ){
@@ -5502,14 +5999,18 @@
5422 return currentObjectID-1;
5423
5424}
+
5425
+
5426uint Context::addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1 ){
5427
5428 RGBcolor color;
5429 color = make_RGBcolor(0.f,0.75f,0.f); //Default color is green
5430 return addConeObject(Ndivs, node0, node1, radius0, radius1, color);
5431}
+
5432
+
5433uint Context::addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const RGBcolor &color ){
5434
5435 const std::vector<helios::vec3> nodes{node0, node1};
@@ -5604,7 +6105,9 @@
5524 return currentObjectID-1;
5525
5526}
+
5527
+
5528uint Context::addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const char* texturefile ){
5529
5530 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -5722,7 +6225,9 @@
5642 return currentObjectID-1;
5643
5644}
+
5645
+
5646std::vector<uint> Context::addSphere(uint Ndivs, const vec3 &center, float radius ){
5647
5648 RGBcolor color = make_RGBcolor(0.f,0.75f,0.f); //Default color is green
@@ -5730,7 +6235,9 @@
5650 return addSphere(Ndivs,center,radius,color);
5651
5652}
+
5653
+
5654std::vector<uint> Context::addSphere(uint Ndivs, const vec3 &center, float radius, const RGBcolor &color ){
5655
5656 std::vector<uint> UUID;
@@ -5780,7 +6287,9 @@
5700
5701
5702}
+
5703
+
5704std::vector<uint> Context::addSphere(uint Ndivs, const vec3 &center, float radius, const char* texturefile ){
5705
5706 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -5885,14 +6394,18 @@
5805
5806
5807}
+
5808
+
5809std::vector<uint> Context::addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv ){
5810
5811 RGBcolor color = make_RGBcolor(0.f,0.75f,0.f); //Default color is green
5812
5813 return addTile(center,size,rotation,subdiv,color);
5814}
+
5815
+
5816std::vector<uint> Context::addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const RGBcolor &color ){
5817
5818 std::vector<uint> UUID;
@@ -5929,7 +6442,9 @@
5849 return UUID;
5850
5851}
+
5852
+
5853std::vector<uint> Context::addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const char* texturefile ){
5854
5855 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -6006,7 +6521,9 @@
5926 return UUID;
5927
5928}
+
5929
+
5930std::vector<uint> Context::addTube(uint Ndivs, const std::vector<vec3> &nodes, const std::vector<float> &radius ){
5931
5932 uint node_count = nodes.size();
@@ -6021,7 +6538,9 @@
5941 return addTube(Ndivs,nodes,radius,color);
5942
5943}
+
5944
+
5945std::vector<uint> Context::addTube(uint radial_subdivisions, const std::vector<vec3> &nodes, const std::vector<float> &radius, const std::vector<RGBcolor> &color ){
5946
5947 const uint node_count = nodes.size();
@@ -6113,7 +6632,9 @@
6033 return UUIDs;
6034
6035}
+
6036
+
6037std::vector<uint> Context::addTube(uint radial_subdivisions, const std::vector<vec3> &nodes, const std::vector<float> &radius, const char* texturefile ){
6038
6039 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -6172,7 +6693,7 @@
6092 nvec.normalize();
6093
6094 for(int j=0; j < radial_subdivisions + 1; j++ ){
-
6095 normal[j][i].x=cfact[j]*radius[i]*nvec.x+sfact[j]*radius[i]*convec.x;
+
6095 normal[j][i].x=cfact[j]*radius[i]*nvec.x+sfact[j]*radius[i]*convec.x;
6096 normal[j][i].y=cfact[j]*radius[i]*nvec.y+sfact[j]*radius[i]*convec.y;
6097 normal[j][i].z=cfact[j]*radius[i]*nvec.z+sfact[j]*radius[i]*convec.z;
6098
@@ -6223,22 +6744,30 @@
6143 return UUIDs;
6144
6145}
+
6146
+
6147std::vector<uint> Context::addBox(const vec3 &center, const vec3 &size, const int3 &subdiv ){
6148
6149 RGBcolor color = make_RGBcolor(0.f,0.75f,0.f); //Default color is green
6150
6151 return addBox(center,size,subdiv,color,false);
6152}
+
6153
+
6154std::vector<uint> Context::addBox(const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color ){
6155 return addBox(center,size,subdiv,color,false);
6156}
+
6157
+
6158std::vector<uint> Context::addBox(const vec3 &center, const vec3 &size, const int3 &subdiv, const char* texturefile ){
6159 return addBox(center,size,subdiv,texturefile,false);
6160}
+
6161
+
6162std::vector<uint> Context::addBox(const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color, bool reverse_normals ){
6163
6164 std::vector<uint> UUID;
@@ -6332,7 +6861,9 @@
6252 return UUID;
6253
6254}
+
6255
+
6256std::vector<uint> Context::addBox(const vec3 &center, const vec3 &size, const int3 &subdiv, const char* texturefile, bool reverse_normals ){
6257
6258 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -6432,31 +6963,45 @@
6352 return UUID;
6353
6354}
+
6355
+
6356std::vector<uint> Context::addDisk(uint Ndivs, const vec3 &center, const vec2 &size ){
6357 return addDisk(make_int2(Ndivs,1),center,size,make_SphericalCoord(0,0),make_RGBAcolor(1,0,0,1));
6358}
+
6359
+
6360std::vector<uint> Context::addDisk(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation ){
6361 return addDisk(make_int2(Ndivs,1),center,size,rotation,make_RGBAcolor(1,0,0,1));
6362}
+
6363
+
6364std::vector<uint> Context::addDisk(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color ){
6365 return addDisk(make_int2(Ndivs,1),center,size,rotation,make_RGBAcolor(color,1));
6366}
+
6367
+
6368std::vector<uint> Context::addDisk(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBAcolor &color ){
6369 return addDisk(make_int2(Ndivs,1),center,size,rotation,color);
6370}
+
6371
+
6372std::vector<uint> Context::addDisk(uint Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const char* texture_file ){
6373 return addDisk(make_int2(Ndivs,1),center,size,rotation,texture_file);
6374}
+
6375
+
6376std::vector<uint> Context::addDisk(const int2 &Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color ){
6377 return addDisk(Ndivs,center,size,rotation,make_RGBAcolor(color,1));
6378}
+
6379
+
6380std::vector<uint> Context::addDisk(const int2 &Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBAcolor &color ){
6381
6382 std::vector<uint> UUID;
@@ -6493,7 +7038,9 @@
6413 return UUID;
6414
6415}
+
6416
+
6417std::vector<uint> Context::addDisk(const int2 &Ndivs, const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const char* texturefile ){
6418
6419 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -6535,7 +7082,9 @@
6455 return UUID;
6456
6457}
+
6458
+
6459std::vector<uint> Context::addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1 ){
6460
6461 RGBcolor color;
@@ -6544,7 +7093,9 @@
6464 return addCone(Ndivs, node0, node1, radius0, radius1, color);
6465
6466}
+
6467
+
6468std::vector<uint> Context::addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, RGBcolor &color ){
6469
6470 std::vector<helios::vec3> nodes{node0, node1};
@@ -6632,7 +7183,9 @@
6552 return UUID;
6553
6554}
+
6555
+
6556std::vector<uint> Context::addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const char* texturefile ){
6557
6558 if( !validateTextureFileExtenstion(texturefile) ) {
@@ -6742,13 +7295,17 @@
6662 return UUID;
6663
6664}
+
6665
+
6666void Context::colorPrimitiveByDataPseudocolor( const std::vector<uint> &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors ){
6667
6668 colorPrimitiveByDataPseudocolor(UUIDs,primitive_data,colormap, Ncolors,9999999,-9999999);
6669
6670}
+
6671
+
6672void Context::colorPrimitiveByDataPseudocolor( const std::vector<uint> &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors, float data_min, float data_max ){
6673
6674 std::map<uint,float> pcolor_data;
@@ -6846,6 +7403,7 @@
6766 }
6767
6768}
+
6769
6770std::vector<RGBcolor> Context::generateColormap( const std::vector<helios::RGBcolor> &ctable, const std::vector<float> &cfrac, uint Ncolors ){
6771
@@ -7047,6 +7605,7 @@
6967
6968}
6969
+
6970Context::~Context(){
6971
6972 for(auto & primitive : primitives){
@@ -7060,11 +7619,15 @@
6980 }
6981
6982}
+
6983
+
6984PrimitiveType Context::getPrimitiveType(uint UUID) const {
6985 return getPrimitivePointer_private(UUID)->getType();
6986}
+
6987
+
6988void Context::setPrimitiveParentObjectID(uint UUID, uint objID){
6989
6990 uint current_objID = getPrimitivePointer_private(UUID)->getParentObjectID();
@@ -7087,23 +7650,31 @@
7007 }
7008
7009}
+
7010
+
7011void Context::setPrimitiveParentObjectID(const std::vector<uint> &UUIDs, uint objID) {
7012 for( uint UUID : UUIDs){
7013 setPrimitiveParentObjectID(UUID, objID);
7014 }
7015}
+
7016
+
7017uint Context::getPrimitiveParentObjectID(uint UUID) const {
7018 return getPrimitivePointer_private(UUID)->getParentObjectID();
7019}
+
7020
7021
+
7022std::vector<uint> Context::getUniquePrimitiveParentObjectIDs(const std::vector<uint> &UUIDs) const {
7023 return getUniquePrimitiveParentObjectIDs(UUIDs, false);
7024}
+
7025
7026
+
7027std::vector<uint> Context::getUniquePrimitiveParentObjectIDs(const std::vector<uint> &UUIDs, bool include_ObjID_zero) const {
7028
7029 //vector of parent object ID for each primitive
@@ -7129,16 +7700,22 @@
7049
7050 return primitiveObjIDs;
7051}
+
7052
+
7053float Context::getPrimitiveArea(uint UUID) const {
7054 return getPrimitivePointer_private(UUID)->getArea();
7055}
+
7056
+
7057void Context::getPrimitiveBoundingBox( uint UUID, vec3 &min_corner, vec3 &max_corner ) const{
7058 const std::vector<uint> UUIDs = {UUID};
7059 getPrimitiveBoundingBox( UUIDs, min_corner, max_corner );
7060}
+
7061
+
7062void Context::getPrimitiveBoundingBox( const std::vector<uint> &UUIDs, vec3 &min_corner, vec3 &max_corner ) const{
7063
7064
@@ -7180,70 +7757,100 @@
7100 p++;
7101 }
7102}
+
7103
+
7104helios::vec3 Context::getPrimitiveNormal(uint UUID) const {
7105 return getPrimitivePointer_private(UUID)->getNormal();
7106}
+
7107
+
7108void Context::getPrimitiveTransformationMatrix(uint UUID, float (&T)[16] ) const {
7109 getPrimitivePointer_private(UUID)->getTransformationMatrix( T );
7110}
+
7111
+
7112void Context::setPrimitiveTransformationMatrix(uint UUID, float (&T)[16] ) {
7113 getPrimitivePointer_private(UUID)->setTransformationMatrix(T);
7114}
+
7115
+
7116void Context::setPrimitiveTransformationMatrix(const std::vector<uint> &UUIDs, float (&T)[16] ) {
7117 for( uint UUID : UUIDs){
7118 getPrimitivePointer_private(UUID)->setTransformationMatrix(T);
7119 }
7120}
+
7121
+
7122std::vector<helios::vec3> Context::getPrimitiveVertices(uint UUID) const {
7123 return getPrimitivePointer_private(UUID)->getVertices();
7124}
+
7125
7126
+
7127helios::RGBcolor Context::getPrimitiveColor(uint UUID) const {
7128 return getPrimitivePointer_private(UUID)->getColor();
7129}
+
7130
+
7131helios::RGBcolor Context::getPrimitiveColorRGB(uint UUID) const {
7132 return getPrimitivePointer_private(UUID)->getColorRGB();
7133}
+
7134
+
7135helios::RGBAcolor Context::getPrimitiveColorRGBA(uint UUID) const {
7136 return getPrimitivePointer_private(UUID)->getColorRGBA();
7137}
+
7138
+
7139void Context::setPrimitiveColor(uint UUID, const RGBcolor &color) {
7140 getPrimitivePointer_private(UUID)->setColor( color );
7141}
+
7142
+
7143void Context::setPrimitiveColor(const std::vector<uint> &UUIDs, const RGBcolor &color) {
7144 for( uint UUID : UUIDs){
7145 getPrimitivePointer_private(UUID)->setColor(color);
7146 }
7147}
+
7148
+
7149void Context::setPrimitiveColor(uint UUID, const RGBAcolor &color) {
7150 getPrimitivePointer_private(UUID)->setColor( color );
7151}
+
7152
+
7153void Context::setPrimitiveColor(const std::vector<uint> &UUIDs, const RGBAcolor &color) {
7154 for( uint UUID : UUIDs){
7155 getPrimitivePointer_private(UUID)->setColor(color);
7156 }
7157}
+
7158
+
7159std::string Context::getPrimitiveTextureFile( uint UUID ) const{
7160 return getPrimitivePointer_private(UUID)->getTextureFile();
7161}
+
7162
+
7163void Context::setPrimitiveTextureFile( uint UUID, const std::string &texturefile ){
7164 getPrimitivePointer_private(UUID)->setTextureFile(texturefile.c_str());
7165}
+
7166
+
7167helios::int2 Context::getPrimitiveTextureSize( uint UUID ) const{
7168 std::string texturefile = getPrimitivePointer_private(UUID)->getTextureFile();
7169 if( !texturefile.empty() && textures.find(texturefile)!=textures.end() ){
@@ -7251,11 +7858,15 @@
7171 }
7172 return make_int2(0,0);
7173}
+
7174
+
7175std::vector<helios::vec2> Context::getPrimitiveTextureUV( uint UUID ) const{
7176 return getPrimitivePointer_private(UUID)->getTextureUV();
7177}
+
7178
+
7179bool Context::primitiveTextureHasTransparencyChannel( uint UUID ) const{
7180 std::string texturefile = getPrimitivePointer_private(UUID)->getTextureFile();
7181 if( !texturefile.empty() && textures.find(texturefile)!=textures.end() ){
@@ -7263,7 +7874,9 @@
7183 }
7184 return false;
7185}
+
7186
+
7187const std::vector<std::vector<bool>> * Context::getPrimitiveTextureTransparencyData(uint UUID ) const{
7188 if(primitiveTextureHasTransparencyChannel(UUID) ){
7189 const std::vector<std::vector<bool> > *data = textures.at(getPrimitivePointer_private(UUID)->getTextureFile()).getTransparencyData();
@@ -7273,35 +7886,49 @@
7193 return 0;
7194 }
7195}
+
7196
+
7197void Context::overridePrimitiveTextureColor( uint UUID ){
7198 getPrimitivePointer_private(UUID)->overrideTextureColor();
7199}
+
7200
+
7201void Context::overridePrimitiveTextureColor( const std::vector<uint> &UUIDs ){
7202 for( uint UUID : UUIDs ) {
7203 getPrimitivePointer_private(UUID)->overrideTextureColor();
7204 }
7205}
+
7206
+
7207void Context::usePrimitiveTextureColor( uint UUID ){
7208 getPrimitivePointer_private(UUID)->useTextureColor();
7209}
+
7210
+
7211void Context::usePrimitiveTextureColor( const std::vector<uint> &UUIDs ){
7212 for( uint UUID : UUIDs ) {
7213 getPrimitivePointer_private(UUID)->useTextureColor();
7214 }
7215}
+
7216
+
7217bool Context::isPrimitiveTextureColorOverridden( uint UUID ) const{
7218 return getPrimitivePointer_private(UUID)->isTextureColorOverridden();
7219}
+
7220
+
7221float Context::getPrimitiveSolidFraction( uint UUID ) const{
7222 return getPrimitivePointer_private(UUID)->getSolidFraction();
7223}
+
7224
+
7225void Context::printPrimitiveInfo(uint UUID) const{
7226
7227 std::cout << "-------------------------------------------" << std::endl;
@@ -7575,7 +8202,9 @@
7495 }
7496 std::cout << "-------------------------------------------" << std::endl;
7497}
+
7498
+
7499void Context::printObjectInfo(uint ObjID) const{
7500
7501 std::cout << "-------------------------------------------" << std::endl;
@@ -7970,6 +8599,7 @@
7890 }
7891 std::cout << "-------------------------------------------" << std::endl;
7892}
+
7893
7894CompoundObject* Context::getObjectPointer_private( uint ObjID ) const{
7895 if( objects.find(ObjID) == objects.end() ){
@@ -7978,6 +8608,7 @@
7898 return objects.at(ObjID);
7899}
7900
+
7901void Context::hideObject( const std::vector<uint> &ObjIDs ){
7902 for( uint ObjID : ObjIDs ) {
7903 if( !doesObjectExist(ObjID) ){
@@ -7989,97 +8620,137 @@
7909 }
7910 }
7911}
+
7912
+
7913bool Context::isObjectHidden( uint ObjID ) const{
7914 if( !doesObjectExist(ObjID) ){
7915 helios_runtime_error("ERROR (Context::isObjectHidden): Object ID of " + std::to_string(ObjID) + " does not exist in the Context.");
7916 }
7917 return objects.at(ObjID)->ishidden;
7918}
+
7919
+
7920float Context::getObjectArea(uint ObjID) const {
7921 return getObjectPointer_private(ObjID)->getArea();
7922}
+
7923
+
7924uint Context::getObjectPrimitiveCount(uint ObjID) const {
7925 return getObjectPointer_private(ObjID)->getPrimitiveCount();
7926}
+
7927
+
7928helios::vec3 Context::getObjectCenter(uint ObjID) const {
7929 return getObjectPointer_private(ObjID)->getObjectCenter();
7930}
+
7931
+
7932std::string Context::getObjectTextureFile(uint ObjID) const{
7933 return getObjectPointer_private(ObjID)->getTextureFile();
7934}
+
7935
+
7936void Context::getObjectTransformationMatrix(uint ObjID, float (&T)[16] ) const {
7937 getObjectPointer_private(ObjID)->getTransformationMatrix( T );
7938}
+
7939
+
7940void Context::setObjectTransformationMatrix(uint ObjID, float (&T)[16] ) {
7941 getObjectPointer_private(ObjID)->setTransformationMatrix(T);
7942}
+
7943
+
7944void Context::setObjectTransformationMatrix(const std::vector<uint> &ObjIDs, float (&T)[16] ) {
7945 for( uint ObjID : ObjIDs){
7946 getObjectPointer_private(ObjID)->setTransformationMatrix(T);
7947 }
7948}
+
7949
+
7950bool Context::objectHasTexture( uint ObjID ) const{
7951 return getObjectPointer_private(ObjID)->hasTexture();
7952}
+
7953
+
7954void Context::setObjectColor(uint ObjID, const RGBcolor &color) {
7955 getObjectPointer_private(ObjID)->setColor( color );
7956}
+
7957
+
7958void Context::setObjectColor(const std::vector<uint> &ObjIDs, const RGBcolor &color) {
7959 for( uint ObjID : ObjIDs){
7960 getObjectPointer_private(ObjID)->setColor(color);
7961 }
7962}
+
7963
+
7964void Context::setObjectColor(uint ObjID, const RGBAcolor &color) {
7965 getObjectPointer_private(ObjID)->setColor( color );
7966}
+
7967
+
7968void Context::setObjectColor(const std::vector<uint> &ObjIDs, const RGBAcolor &color) {
7969 for( uint ObjID : ObjIDs){
7970 getObjectPointer_private(ObjID)->setColor(color);
7971 }
7972}
+
7973
+
7974bool Context::doesObjectContainPrimitive(uint ObjID, uint UUID ){
7975 return getObjectPointer_private(ObjID)->doesObjectContainPrimitive( UUID );
7976}
+
7977
+
7978void Context::overrideObjectTextureColor(uint ObjID) {
7979 getObjectPointer_private(ObjID)->overrideTextureColor();
7980}
+
7981
+
7982void Context::overrideObjectTextureColor( const std::vector<uint> &ObjIDs) {
7983 for( uint ObjID : ObjIDs ) {
7984 getObjectPointer_private(ObjID)->overrideTextureColor();
7985 }
7986}
+
7987
+
7988void Context::useObjectTextureColor(uint ObjID) {
7989 getObjectPointer_private(ObjID)->useTextureColor();
7990}
+
7991
+
7992void Context::useObjectTextureColor( const std::vector<uint> &ObjIDs) {
7993 for( uint ObjID : ObjIDs ) {
7994 getObjectPointer_private(ObjID)->useTextureColor();
7995 }
7996}
+
7997
+
7998void Context::getObjectBoundingBox( uint ObjID, vec3 &min_corner, vec3 &max_corner ) const {
7999 std::vector<uint> ObjIDs{ObjID};
8000 getObjectBoundingBox(ObjIDs,min_corner,max_corner);
8001}
+
8002
+
8003void Context::getObjectBoundingBox( const std::vector<uint> &ObjIDs, vec3 &min_corner, vec3 &max_corner ) const{
8004
8005 uint o=0;
@@ -8129,6 +8800,7 @@
8049 }
8050
8051}
+
8052
8053Tile* Context::getTileObjectPointer_private(uint ObjID ) const{
8054 if( objects.find(ObjID) == objects.end() ){
@@ -8193,544 +8865,624 @@
8113 return dynamic_cast<Cone*>(objects.at(ObjID));
8114}
8115
+
8116helios::vec3 Context::getTileObjectCenter(uint ObjID) const {
8117 return getTileObjectPointer_private(ObjID)->getCenter();
8118}
+
8119
+
8120helios::vec2 Context::getTileObjectSize(uint ObjID) const {
8121 return getTileObjectPointer_private(ObjID)->getSize();
8122}
+
8123
+
8124helios::int2 Context::getTileObjectSubdivisionCount(uint ObjID) const {
8125 return getTileObjectPointer_private(ObjID)->getSubdivisionCount();
8126}
+
8127
+
8128helios::vec3 Context::getTileObjectNormal(uint ObjID) const {
8129 return getTileObjectPointer_private(ObjID)->getNormal();
8130}
+
8131
+
8132std::vector<helios::vec2> Context::getTileObjectTextureUV(uint ObjID) const {
8133 return getTileObjectPointer_private(ObjID)->getTextureUV();
8134}
+
8135
+
8136std::vector<helios::vec3> Context::getTileObjectVertices(uint ObjID) const {
8137 return getTileObjectPointer_private(ObjID)->getVertices();
8138}
+
8139
+
8140helios::vec3 Context::getSphereObjectCenter(uint ObjID) const {
8141 return getSphereObjectPointer_private(ObjID)->getCenter();
8142}
+
8143
+
8144helios::vec3 Context::getSphereObjectRadius(uint ObjID) const {
8145 return getSphereObjectPointer_private(ObjID)->getRadius();
8146}
+
8147
+
8148uint Context::getSphereObjectSubdivisionCount(uint ObjID) const {
8149 return getSphereObjectPointer_private(ObjID)->getSubdivisionCount();
8150}
+
8151
+
8152float Context::getSphereObjectVolume(uint ObjID) const {
8153 return getSphereObjectPointer_private(ObjID)->getVolume();
8154}
+
8155
+
8156uint Context::getTubeObjectSubdivisionCount(uint ObjID) const {
8157 return getTubeObjectPointer_private(ObjID)->getSubdivisionCount();
8158}
+
8159
+
8160std::vector<helios::vec3> Context::getTubeObjectNodes(uint ObjID) const {
8161 return getTubeObjectPointer_private(ObjID)->getNodes();
8162}
+
8163
+
8164std::vector<float> Context::getTubeObjectNodeRadii(uint ObjID) const {
8165 return getTubeObjectPointer_private(ObjID)->getNodeRadii();
8166}
+
8167
+
8168std::vector<RGBcolor> Context::getTubeObjectNodeColors(uint ObjID) const {
8169 return getTubeObjectPointer_private(ObjID)->getNodeColors();
8170}
+
8171
+
8172float Context::getTubeObjectVolume(uint ObjID) const {
8173 return getTubeObjectPointer_private(ObjID)->getVolume();
8174}
+
8175
+
8176float Context::getTubeObjectSegmentVolume( uint ObjID, uint segment_index ) const{
8177 return getTubeObjectPointer_private(ObjID)->getSegmentVolume(segment_index);
8178}
+
8179
+
8180void Context::appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float node_radius, const RGBcolor &node_color ){
8181 if( objects.find(ObjID) == objects.end() ) {
8182 helios_runtime_error("ERROR (Context::appendTubeSegment): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
8183 }
-
8184 dynamic_cast<Tube*>(objects.at(ObjID))->appendTubeSegment(node_position, node_radius, node_color);
+
8184 dynamic_cast<Tube*>(objects.at(ObjID))->appendTubeSegment(node_position, node_radius, node_color);
8185}
+
8186
+
8187void Context::appendTubeSegment( uint ObjID, const helios::vec3 &node_position, float node_radius, const char* texturefile, const helios::vec2 &textureuv_ufrac ){
8188 if( objects.find(ObjID) == objects.end() ) {
8189 helios_runtime_error("ERROR (Context::appendTubeSegment): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
8190 }
-
8191 dynamic_cast<Tube*>(objects.at(ObjID))->appendTubeSegment(node_position, node_radius, texturefile, textureuv_ufrac);
+
8191 dynamic_cast<Tube*>(objects.at(ObjID))->appendTubeSegment(node_position, node_radius, texturefile, textureuv_ufrac);
8192}
+
8193
+
8194void Context::scaleTubeGirth( uint ObjID, float scale_factor ){
8195 if( objects.find(ObjID) == objects.end() ) {
8196 helios_runtime_error("ERROR (Context::scaleTubeGirth): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
8197 }
-
8198 dynamic_cast<Tube*>(objects.at(ObjID))->scaleTubeGirth(scale_factor);
+
8198 dynamic_cast<Tube*>(objects.at(ObjID))->scaleTubeGirth(scale_factor);
8199}
+
8200
+
8201void Context::setTubeRadii( uint ObjID, const std::vector<float> &node_radii ){
8202 if( objects.find(ObjID) == objects.end() ) {
8203 helios_runtime_error("ERROR (Context::setTubeRadii): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
8204 }
-
8205 dynamic_cast<Tube*>(objects.at(ObjID))->setTubeRadii(node_radii);
+
8205 dynamic_cast<Tube*>(objects.at(ObjID))->setTubeRadii(node_radii);
8206}
+
8207
+
8208void Context::scaleTubeLength( uint ObjID, float scale_factor ){
8209 if( objects.find(ObjID) == objects.end() ) {
8210 helios_runtime_error("ERROR (Context::scaleTubeLength): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
8211 }
-
8212 dynamic_cast<Tube*>(objects.at(ObjID))->scaleTubeLength(scale_factor);
+
8212 dynamic_cast<Tube*>(objects.at(ObjID))->scaleTubeLength(scale_factor);
8213}
+
8214
+
8215void Context::setTubeNodes( uint ObjID, const std::vector<helios::vec3> &node_xyz ){
8216 if( objects.find(ObjID) == objects.end() ) {
8217 helios_runtime_error("ERROR (Context::setTubeNodes): ObjectID of " + std::to_string(ObjID) + " does not exist in the Context.");
8218 }
-
8219 dynamic_cast<Tube*>(objects.at(ObjID))->setTubeNodes(node_xyz);
+
8219 dynamic_cast<Tube*>(objects.at(ObjID))->setTubeNodes(node_xyz);
8220}
+
8221
+
8222helios::vec3 Context::getBoxObjectCenter(uint ObjID) const {
8223 return getBoxObjectPointer_private(ObjID)->getCenter();
8224}
+
8225
+
8226helios::vec3 Context::getBoxObjectSize(uint ObjID) const {
8227 return getBoxObjectPointer_private(ObjID)->getSize();
8228}
+
8229
+
8230helios::int3 Context::getBoxObjectSubdivisionCount(uint ObjID) const {
8231 return getBoxObjectPointer_private(ObjID)->getSubdivisionCount();
8232}
+
8233
+
8234float Context::getBoxObjectVolume(uint ObjID) const {
8235 return getBoxObjectPointer_private(ObjID)->getVolume();
8236}
+
8237
+
8238helios::vec3 Context::getDiskObjectCenter(uint ObjID) const {
8239 return getDiskObjectPointer_private(ObjID)->getCenter();
8240}
+
8241
+
8242helios::vec2 Context::getDiskObjectSize(uint ObjID) const {
8243 return getDiskObjectPointer_private(ObjID)->getSize();
8244}
+
8245
+
8246uint Context::getDiskObjectSubdivisionCount(uint ObjID) const {
8247 return getDiskObjectPointer_private(ObjID)->getSubdivisionCount().x;
8248}
+
8249
+
8250uint Context::getConeObjectSubdivisionCount(uint ObjID) const {
8251 return getConeObjectPointer_private(ObjID)->getSubdivisionCount();
8252}
+
8253
+
8254std::vector<helios::vec3> Context::getConeObjectNodes(uint ObjID) const {
8255 return getConeObjectPointer_private(ObjID)->getNodeCoordinates();
8256}
+
8257
+
8258std::vector<float> Context::getConeObjectNodeRadii(uint ObjID) const {
8259 return getConeObjectPointer_private(ObjID)->getNodeRadii();
8260}
+
8261
+
8262helios::vec3 Context::getConeObjectNode(uint ObjID, int number) const {
8263 return getConeObjectPointer_private(ObjID)->getNodeCoordinate(number);
8264}
+
8265
+
8266float Context::getConeObjectNodeRadius(uint ObjID, int number) const {
8267 return getConeObjectPointer_private(ObjID)->getNodeRadius(number);
8268}
+
8269
+
8270helios::vec3 Context::getConeObjectAxisUnitVector(uint ObjID) const {
8271 return getConeObjectPointer_private(ObjID)->getAxisUnitVector();
8272}
+
8273
+
8274float Context::getConeObjectLength(uint ObjID) const {
8275 return getConeObjectPointer_private(ObjID)->getLength();
8276}
+
8277
+
8278float Context::getConeObjectVolume(uint ObjID) const {
8279 return getConeObjectPointer_private(ObjID)->getVolume();
8280}
+
8281
+
8282float Context::getPolymeshObjectVolume(uint ObjID) const {
8283 return getPolymeshObjectPointer_private(ObjID)->getVolume();
8284}
+
-
helios::HeliosDataType
HeliosDataType
Data types.
Definition: Context.h:41
-
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition: Context.h:59
-
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition: Context.h:49
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
-
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition: Context.h:43
-
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition: Context.h:63
-
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition: Context.h:53
-
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition: Context.h:61
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition: Context.h:57
-
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition: Context.h:55
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
-
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition: Context.h:31
-
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition: Context.h:33
-
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition: Context.h:37
-
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition: Context.h:35
-
helios::ObjectType
ObjectType
Type of compound object.
Definition: Context.h:128
-
helios::OBJECT_TYPE_BOX
@ OBJECT_TYPE_BOX
Box.
Definition: Context.h:136
-
helios::OBJECT_TYPE_POLYMESH
@ OBJECT_TYPE_POLYMESH
< Triangular Mesh
Definition: Context.h:140
-
helios::OBJECT_TYPE_TUBE
@ OBJECT_TYPE_TUBE
Tube.
Definition: Context.h:134
-
helios::OBJECT_TYPE_CONE
@ OBJECT_TYPE_CONE
< Cone/tapered cylinder
Definition: Context.h:142
-
helios::OBJECT_TYPE_DISK
@ OBJECT_TYPE_DISK
< Disk
Definition: Context.h:138
-
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition: Context.h:130
-
helios::OBJECT_TYPE_SPHERE
@ OBJECT_TYPE_SPHERE
< Sphere
Definition: Context.h:132
-
helios::Box
Box compound object class.
Definition: Context.h:759
-
helios::Box::getVolume
float getVolume() const
Get the volume of the box object.
Definition: Context.cpp:4004
-
helios::Box::setSubdivisionCount
void setSubdivisionCount(const helios::int3 &subdiv)
Set the number of box sub-patch divisions.
Definition: Context.cpp:4000
-
helios::Box::getSubdivisionCount
helios::int3 getSubdivisionCount() const
Get the number of sub-patch divisions of the box object in each Cartesian direction.
Definition: Context.cpp:3996
-
helios::Box::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the box object.
Definition: Context.cpp:3980
-
helios::Box::Box
Box(uint a_OID, const std::vector< uint > &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:3941
-
helios::Box::getSize
vec3 getSize() const
Get the dimensions of the box object in each Cartesian direction.
Definition: Context.cpp:3961
- -
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition: Context.cpp:2377
-
helios::CompoundObject::setPrimitiveUUIDs
void setPrimitiveUUIDs(const std::vector< uint > &UUIDs)
Method to set the UUIDs of object child primitives.
Definition: Context.cpp:2517
-
helios::CompoundObject::getPrimitiveCount
uint getPrimitiveCount() const
Return the number of primitives contained in the object.
Definition: Context.cpp:2251
-
helios::CompoundObject::overrideTextureColor
void overrideTextureColor()
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:2321
-
helios::CompoundObject::getObjectID
uint getObjectID() const
Get the unique identifier for the object.
Definition: Context.cpp:2243
-
helios::CompoundObject::getTextureFile
std::string getTextureFile() const
Method to return the texture map file of an Object.
Definition: Context.cpp:2349
-
helios::CompoundObject::scale
void scale(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2471
-
helios::CompoundObject::deleteChildPrimitive
void deleteChildPrimitive(uint UUID)
Delete a single child member of the object.
Definition: Context.cpp:2521
-
helios::CompoundObject::hasTexture
bool hasTexture() const
Method to check whether this object has texture data.
Definition: Context.cpp:2341
-
helios::CompoundObject::setTransformationMatrix
void setTransformationMatrix(float(&T)[16])
Method to set the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2509
-
helios::CompoundObject::scaleAboutCenter
void scaleAboutCenter(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2475
-
helios::CompoundObject::scaleAboutPoint
void scaleAboutPoint(const helios::vec3 &scale, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2479
-
helios::CompoundObject::arePrimitivesComplete
bool arePrimitivesComplete() const
Method to query whether all object primitives are in tact.
Definition: Context.cpp:2536
-
helios::CompoundObject::getArea
float getArea() const
Calculate the total one-sided surface area of the Compound Object.
Definition: Context.cpp:2285
-
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition: Context.cpp:2353
-
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2247
-
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition: Context.cpp:2256
-
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2503
-
helios::CompoundObject::setColor
void setColor(const helios::RGBcolor &color)
Method to set the diffuse color for all primitives in the Compound Object.
Definition: Context.cpp:2301
-
helios::CompoundObject::useTextureColor
void useTextureColor()
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition: Context.cpp:2331
-
helios::CompoundObject::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint UUID)
Check whether a primitive is a member of the object based on its UUID.
Definition: Context.cpp:2262
-
helios::CompoundObject::getObjectCenter
helios::vec3 getObjectCenter() const
Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
Definition: Context.cpp:2268
-
helios::Cone
Cone compound object class.
Definition: Context.h:847
-
helios::Cone::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the cone object.
Definition: Context.cpp:4171
-
helios::Cone::Cone
Cone(uint a_OID, const std::vector< uint > &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:4107
-
helios::Cone::getNodeRadius
float getNodeRadius(int node_index) const
Get the radius of a cone object node.
Definition: Context.cpp:4163
-
helios::Cone::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of radial sub-triangle divisions.
Definition: Context.cpp:4175
-
helios::Cone::getNodeCoordinate
helios::vec3 getNodeCoordinate(int node_index) const
Get the Cartesian coordinates of a cone object node.
Definition: Context.cpp:4144
-
helios::Cone::getAxisUnitVector
helios::vec3 getAxisUnitVector() const
Get a unit vector pointing in the direction of the cone central axis.
Definition: Context.cpp:4179
-
helios::Cone::getNodeCoordinates
std::vector< helios::vec3 > getNodeCoordinates() const
Get the Cartesian coordinates of each of the cone object nodes.
Definition: Context.cpp:4130
-
helios::Cone::scaleLength
void scaleLength(float S)
Method to scale the length of the cone.
Definition: Context.cpp:4212
-
helios::Cone::scaleGirth
void scaleGirth(float S)
Method to scale the girth of the cone.
Definition: Context.cpp:4261
-
helios::Cone::getLength
float getLength() const
Get the length of the cone along the axial direction.
Definition: Context.cpp:4197
-
helios::Cone::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the cone object nodes.
Definition: Context.cpp:4159
-
helios::Cone::getVolume
float getVolume() const
Get the volume of the cone object.
Definition: Context.cpp:4302
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition: Context_data.cpp:1192
-
helios::Context::getTileObjectTextureUV
std::vector< helios::vec2 > getTileObjectTextureUV(uint ObjID) const
get the texture UV coordinates of a tile object from the context
Definition: Context.cpp:8132
-
helios::Context::setTileObjectSubdivisionCount
void setTileObjectSubdivisionCount(const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
Change the subdivision count of a tile object.
Definition: Context.cpp:2982
-
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition: Context.cpp:7139
-
helios::Context::getPrimitiveTransformationMatrix
void getPrimitiveTransformationMatrix(uint UUID, float(&T)[16]) const
Method to return the Affine transformation matrix of a Primitive.
Definition: Context.cpp:7108
-
helios::Context::scaleTubeLength
void scaleTubeLength(uint ObjID, float scale_factor)
Scale the length of a tube object by an arbitrary factor for all tube nodes.
Definition: Context.cpp:8208
-
helios::Context::isObjectHidden
bool isObjectHidden(uint ObjID) const
Query if an object is hidden.
Definition: Context.cpp:7913
-
helios::Context::listTimeseriesVariables
std::vector< std::string > listTimeseriesVariables() const
List all existing timeseries variables.
Definition: Context.cpp:2036
-
helios::Context::scaleObjectAboutPoint
void scaleObjectAboutPoint(uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2897
-
helios::Context::getTubeObjectSegmentVolume
float getTubeObjectSegmentVolume(uint ObjID, uint segment_index) const
get the volume of a segment within a Tube object
Definition: Context.cpp:8176
-
helios::Context::getPrimitiveColor
helios::RGBcolor getPrimitiveColor(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition: Context.cpp:7127
-
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition: Context.cpp:2642
-
helios::Context::randn
float randn()
Draw a random number from a normal distribution with mean = 0, stddev = 1.
Definition: Context.cpp:1204
-
helios::Context::getDiskObjectPointer
Disk * getDiskObjectPointer(uint ObjID) const
Get a pointer to a Disk Compound Object.
Definition: Context.cpp:4022
-
helios::Context::overrideObjectTextureColor
void overrideObjectTextureColor(uint ObjID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7978
-
helios::Context::getUniquePrimitiveParentObjectIDs
std::vector< uint > getUniquePrimitiveParentObjectIDs(const std::vector< uint > &UUIDs) const
Method to return unique parent object IDs for a vector of primitive UUIDs.
Definition: Context.cpp:7022
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::getObjectBoundingBox
void getObjectBoundingBox(uint ObjID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single object.
Definition: Context.cpp:7998
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getBoxObjectPointer
Box * getBoxObjectPointer(uint ObjID) const
Get a pointer to a Box Compound Object.
Definition: Context.cpp:3954
-
helios::Context::cleanDeletedUUIDs
void cleanDeletedUUIDs(std::vector< uint > &UUIDs) const
Delete UUIDs from vector if primitives no longer exist (1D vector)
Definition: Context.cpp:1793
-
helios::Context::getConeObjectSubdivisionCount
uint getConeObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Cone object from the context
Definition: Context.cpp:8250
-
helios::Context::getDiskObjectCenter
helios::vec3 getDiskObjectCenter(uint ObjID) const
get the center of a Disk object from the context
Definition: Context.cpp:8238
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::getJulianDate
int getJulianDate() const
Get simulation date by Julian day.
Definition: Context.cpp:1132
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::getBoxObjectSubdivisionCount
helios::int3 getBoxObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Box object from the context
Definition: Context.cpp:8230
-
helios::Context::getTubeObjectSubdivisionCount
uint getTubeObjectSubdivisionCount(uint ObjectID) const
get the subdivision count of a Tube object from the context
Definition: Context.cpp:8156
-
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:2983
-
helios::Context::~Context
~Context()
Context destructor.
Definition: Context.cpp:6970
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition: Context.cpp:2589
-
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition: Context.cpp:4123
-
helios::Context::seedRandomGenerator
void seedRandomGenerator(uint seed)
Set seed for random generator.
Definition: Context.cpp:45
-
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition: Context_data.cpp:2815
-
helios::Context::printPrimitiveInfo
void printPrimitiveInfo(uint UUID) const
Prints primitive properties to console (useful for debugging purposes)
Definition: Context.cpp:7225
-
helios::Context::markGeometryClean
void markGeometryClean()
Mark the Context geometry as "clean", meaning that the geometry has not been modified since last set ...
Definition: Context.cpp:149
-
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition: Context.cpp:2116
-
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition: Context.cpp:2847
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::getPatchCenter
helios::vec3 getPatchCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a patch element.
Definition: Context.cpp:1693
-
helios::Context::getTileObjectSize
helios::vec2 getTileObjectSize(uint ObjID) const
get the size of a tile object from the context
Definition: Context.cpp:8120
-
helios::Context::getObjectPrimitiveCount
uint getObjectPrimitiveCount(uint ObjID) const
Method to return the number of primitives contained in the object.
Definition: Context.cpp:7924
-
helios::Context::getPrimitiveDataSize
uint getPrimitiveDataSize(uint UUID, const char *label) const
Get the size/length of primitive data.
Definition: Context_data.cpp:1162
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition: Context.cpp:7135
-
helios::Context::getBoxObjectSize
helios::vec3 getBoxObjectSize(uint ObjID) const
get the size of a Box object from the context
Definition: Context.cpp:8226
-
helios::Context::getSphereObjectCenter
helios::vec3 getSphereObjectCenter(uint ObjID) const
get the center of a Sphere object from the context
Definition: Context.cpp:8140
-
helios::Context::getObjectCenter
helios::vec3 getObjectCenter(uint ObjID) const
Method to return the Cartesian (x,y,z) point of the center of a bounding box for the object.
Definition: Context.cpp:7928
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getObjectCount
uint getObjectCount() const
Get the total number of objects that have been created in the Context.
Definition: Context.cpp:2581
-
helios::Context::getConeObjectNode
helios::vec3 getConeObjectNode(uint ObjID, int number) const
get a node of a Cone object from the context
Definition: Context.cpp:8262
-
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition: Context.cpp:8172
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::cropDomainZ
void cropDomainZ(const vec2 &zbounds)
Crop the domain in the z-direction such that all primitives lie within some specified z interval.
Definition: Context.cpp:2190
-
helios::Context::getPolymeshObjectPointer
Polymesh * getPolymeshObjectPointer(uint ObjID) const
Get a pointer to a Polygon Mesh Compound Object.
Definition: Context.cpp:4081
-
helios::Context::cropDomainX
void cropDomainX(const vec2 &xbounds)
Crop the domain in the x-direction such that all primitives lie within some specified x interval.
Definition: Context.cpp:2144
-
helios::Context::getSphereObjectRadius
helios::vec3 getSphereObjectRadius(uint ObjID) const
get the radius of a Sphere object from the context
Definition: Context.cpp:8144
-
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition: Context.cpp:1059
-
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:6988
-
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition: Context.cpp:7179
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::usePrimitiveTextureColor
void usePrimitiveTextureColor(uint UUID)
Use the texture map to color the primitive rather than the constant RGB color. This is function rever...
Definition: Context.cpp:7207
-
helios::Context::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint ObjID, uint UUID)
Method to check if an Object contains a Primitive.
Definition: Context.cpp:7974
-
helios::Context::getMonthString
const char * getMonthString() const
Get a string corresponding to the month of the simulation date.
Definition: Context.cpp:1103
-
helios::Context::filterObjectsByData
std::vector< uint > filterObjectsByData(const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
Get a vector of object IDs that meet filtering criteria based on object data.
Definition: Context.cpp:2750
-
helios::Context::setObjectColor
void setObjectColor(uint ObjID, const helios::RGBcolor &color)
Method to set the diffuse color of an Object.
Definition: Context.cpp:7954
-
helios::Context::setTriangleVertices
void setTriangleVertices(uint UUID, const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
//! Manually set the Triangle vertices
Definition: Context.cpp:1722
-
helios::Context::appendTubeSegment
void appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
Append a tube segment to an existing tube object.
Definition: Context.cpp:8180
-
helios::Context::isGeometryDirty
bool isGeometryDirty() const
Query whether the Context geometry is "dirty", meaning has the geometry been modified since last set ...
Definition: Context.cpp:157
-
helios::Context::getTileObjectNormal
helios::vec3 getTileObjectNormal(uint ObjID) const
get the normal of a tile object from the context
Definition: Context.cpp:8128
-
helios::Context::Context
Context()
Context default constructor.
Definition: Context.cpp:20
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition: Context.cpp:1741
-
helios::Context::getTubeObjectNodeRadii
std::vector< float > getTubeObjectNodeRadii(uint ObjID) const
get the node radii of a Tube object from the context
Definition: Context.cpp:8164
-
helios::Context::getPrimitiveSolidFraction
float getPrimitiveSolidFraction(uint UUID) const
Get fraction of primitive surface area that is non-transparent.
Definition: Context.cpp:7221
-
helios::Context::translateObject
void translateObject(uint ObjID, const vec3 &shift)
Translate a single compound object.
Definition: Context.cpp:2837
-
helios::Context::scaleObjectAboutCenter
void scaleObjectAboutCenter(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2887
-
helios::Context::cropDomainY
void cropDomainY(const vec2 &ybounds)
Crop the domain in the y-direction such that all primitives lie within some specified y interval.
Definition: Context.cpp:2167
-
helios::Context::getObjectType
helios::ObjectType getObjectType(uint ObjID) const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2940
-
helios::Context::colorPrimitiveByDataPseudocolor
void colorPrimitiveByDataPseudocolor(const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors)
Overwrite primitive color based on a pseudocolor mapping of primitive data values.
Definition: Context.cpp:6666
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getTubeObjectNodeColors
std::vector< RGBcolor > getTubeObjectNodeColors(uint ObjID) const
get the node colors of a Tube object from the context
Definition: Context.cpp:8168
-
helios::Context::listPrimitiveData
std::vector< std::string > listPrimitiveData(uint UUID) const
Return labels for all primitive data for this particular primitive.
Definition: Context_data.cpp:1268
-
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition: Context.cpp:2907
-
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition: Context.cpp:1578
-
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition: Context.cpp:7167
-
helios::Context::getTriangleVertex
helios::vec3 getTriangleVertex(uint UUID, uint number) const
Get a single vertex of a Triangle based on an index.
Definition: Context.cpp:1711
-
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition: Context.cpp:1166
-
helios::Context::getPrimitiveColorRGB
helios::RGBcolor getPrimitiveColorRGB(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition: Context.cpp:7131
-
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Context.cpp:2046
-
helios::Context::getDiskObjectSubdivisionCount
uint getDiskObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Disk object from the context
Definition: Context.cpp:8246
-
helios::Context::setPrimitiveTextureFile
void setPrimitiveTextureFile(uint UUID, const std::string &texturefile)
Set the texture map file for a primitive.
Definition: Context.cpp:7163
-
helios::Context::getConeObjectNodes
std::vector< helios::vec3 > getConeObjectNodes(uint ObjID) const
get the nodes of a Cone object from the context
Definition: Context.cpp:8254
-
helios::Context::hidePrimitive
void hidePrimitive(const std::vector< uint > &UUIDs)
Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()
Definition: Context.cpp:1777
-
helios::Context::getSphereObjectPointer
Sphere * getSphereObjectPointer(uint ObjID) const
Get a pointer to a Sphere Compound Object.
Definition: Context.cpp:3410
-
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7197
-
helios::Context::getTileObjectSubdivisionCount
helios::int2 getTileObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a tile object from the context
Definition: Context.cpp:8124
-
helios::Context::isPrimitiveHidden
bool isPrimitiveHidden(uint UUID) const
Query whether a primitive is hidden.
Definition: Context.cpp:1786
-
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition: Context.cpp:1099
-
helios::Context::printObjectInfo
void printObjectInfo(uint ObjID) const
Prints object properties to console (useful for debugging purposes)
Definition: Context.cpp:7499
-
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition: Context.cpp:49
-
helios::Context::hideObject
void hideObject(const std::vector< uint > &ObjIDs)
Hide compound objects in the Context such that their object IDs are not returned in Context::getAllOb...
Definition: Context.cpp:7901
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition: Context.cpp:7187
-
helios::Context::getTileObjectAreaRatio
float getTileObjectAreaRatio(uint ObjectID) const
Get the area ratio of a tile object (total object area / sub-patch area)
Definition: Context.cpp:2944
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::getTubeObjectNodes
std::vector< helios::vec3 > getTubeObjectNodes(uint ObjID) const
get the nodes of a Tube object from the context
Definition: Context.cpp:8160
-
helios::Context::getTileObjectCenter
helios::vec3 getTileObjectCenter(uint ObjID) const
Get the Cartesian (x,y,z) center position of a tile object.
Definition: Context.cpp:8116
-
helios::Context::scaleTubeGirth
void scaleTubeGirth(uint ObjID, float scale_factor)
Scale the girth for all nodes of a tube object.
Definition: Context.cpp:8194
-
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition: Context.cpp:7217
-
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition: Context.cpp:2609
-
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition: Context.cpp:7920
-
helios::Context::getObjectTextureFile
std::string getObjectTextureFile(uint ObjID) const
Method to return the texture map file of an Object.
Definition: Context.cpp:7932
-
helios::Context::getPolymeshObjectVolume
float getPolymeshObjectVolume(uint ObjID) const
Get the volume of a Polygon Mesh object from the context.
Definition: Context.cpp:8282
-
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition: Context.cpp:1491
-
helios::Context::getTubeObjectPointer
Tube * getTubeObjectPointer(uint ObjID) const
Get a pointer to a Tube Compound Object.
Definition: Context.cpp:3486
-
helios::Context::getPatchSize
helios::vec2 getPatchSize(uint UUID) const
Get the size of a patch element.
Definition: Context.cpp:1684
-
helios::Context::getTileObjectVertices
std::vector< helios::vec3 > getTileObjectVertices(uint ObjID) const
get the vertices of a tile object from the context
Definition: Context.cpp:8136
-
helios::Context::markGeometryDirty
void markGeometryDirty()
Mark the Context geometry as "dirty", meaning that the geometry has been modified since last set as c...
Definition: Context.cpp:153
-
helios::Context::getPrimitiveBoundingBox
void getPrimitiveBoundingBox(uint UUID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single primitive.
Definition: Context.cpp:7057
-
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition: Context.cpp:7104
-
helios::Context::getObjectDataSize
uint getObjectDataSize(uint objID, const char *label) const
Get the size/length of primitive data.
Definition: Context_data.cpp:2976
-
helios::Context::getConeObjectAxisUnitVector
helios::vec3 getConeObjectAxisUnitVector(uint ObjID) const
get the axis unit vector of a Cone object from the context
Definition: Context.cpp:8270
-
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition: Context.cpp:1750
-
helios::Context::getDiskObjectSize
helios::vec2 getDiskObjectSize(uint ObjID) const
get the size of a Disk object from the context
Definition: Context.cpp:8242
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::areObjectPrimitivesComplete
bool areObjectPrimitivesComplete(uint objID) const
Method to query whether all object primitives are in tact.
Definition: Context.cpp:2540
-
helios::Context::getConeObjectLength
float getConeObjectLength(uint ObjID) const
get the length of a Cone object from the context
Definition: Context.cpp:8274
-
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition: Context.cpp:3312
-
helios::Context::scalePrimitiveAboutPoint
void scalePrimitiveAboutPoint(uint UUID, const helios::vec3 &S, const helios::vec3 point)
Scale a primitive using its UUID about an arbitrary point in space.
Definition: Context.cpp:1512
-
helios::Context::useObjectTextureColor
void useObjectTextureColor(uint ObjID)
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition: Context.cpp:7988
-
helios::Context::getSphereObjectSubdivisionCount
uint getSphereObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Sphere object from the context
Definition: Context.cpp:8148
-
helios::Context::setLocation
void setLocation(const helios::Location &location)
Set the location of the simulation (latitude, longitude, and UTC offset)
Definition: Context.cpp:1170
-
helios::Context::listObjectData
std::vector< std::string > listObjectData(uint ObjID) const
Return labels for all object data for this particular object.
Definition: Context_data.cpp:3083
-
helios::Context::getConeObjectNodeRadii
std::vector< float > getConeObjectNodeRadii(uint ObjID) const
get the node radii of a Cone object from the context
Definition: Context.cpp:8258
-
helios::Context::getBoxObjectVolume
float getBoxObjectVolume(uint ObjID) const
get the volume of a Box object from the context
Definition: Context.cpp:8234
-
helios::Context::copyObjectData
void copyObjectData(uint source_objID, uint destination_objID)
copy all object data from one compound object to another
Definition: Context_data.cpp:2990
-
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition: Context.cpp:1136
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::Context::getSphereObjectVolume
float getSphereObjectVolume(uint ObjID) const
get the volume of a Sphere object from the context
Definition: Context.cpp:8152
-
helios::Context::setObjectTransformationMatrix
void setObjectTransformationMatrix(uint ObjID, float(&T)[16])
Method to set the Affine transformation matrix of an Object.
Definition: Context.cpp:7940
-
helios::Context::cropDomain
void cropDomain(std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
Crop specified UUIDs such that they lie within some specified axis-aligned box.
Definition: Context.cpp:2213
-
helios::Context::setTubeNodes
void setTubeNodes(uint ObjID, const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition: Context.cpp:8215
-
helios::Context::getLocation
helios::Location getLocation() const
Get the location of the simulation (latitude, longitude, and UTC offset)
Definition: Context.cpp:1174
-
helios::Context::getConeObjectNodeRadius
float getConeObjectNodeRadius(uint ObjID, int number) const
get a node radius of a Cone object from the context
Definition: Context.cpp:8266
-
helios::Context::cleanDeletedObjectIDs
void cleanDeletedObjectIDs(std::vector< uint > &objIDs) const
Delete Object IDs from vector if objects no longer exist (1D vector)
Definition: Context.cpp:2544
-
helios::Context::getConeObjectVolume
float getConeObjectVolume(uint ObjID) const
get the volume of a Cone object from the context
Definition: Context.cpp:8278
-
helios::Context::getBoxObjectCenter
helios::vec3 getBoxObjectCenter(uint ObjID) const
get the center of a Box object from the context
Definition: Context.cpp:8222
-
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:2969
-
helios::Context::setPrimitiveTransformationMatrix
void setPrimitiveTransformationMatrix(uint UUID, float(&T)[16])
Method to set the Affine transformation matrix of a Primitive.
Definition: Context.cpp:7112
-
helios::Context::getObjectTransformationMatrix
void getObjectTransformationMatrix(uint ObjID, float(&T)[16]) const
Method to return the Affine transformation matrix of an Object.
Definition: Context.cpp:7936
-
helios::Context::setTubeRadii
void setTubeRadii(uint ObjID, const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition: Context.cpp:8201
-
helios::Context::objectHasTexture
bool objectHasTexture(uint ObjID) const
Method to check whether an Object has texture data.
Definition: Context.cpp:7950
-
helios::Context::scaleObject
void scaleObject(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2877
-
helios::Disk
Disk compound object class.
Definition: Context.h:795
-
helios::Disk::getSize
vec2 getSize() const
Get the lateral dimensions of the disk object.
Definition: Context.cpp:4029
-
helios::Disk::getSubdivisionCount
int2 getSubdivisionCount() const
Get the number of sub-triangle divisions of the disk object.
Definition: Context.cpp:4061
-
helios::Disk::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the disk object.
Definition: Context.cpp:4045
-
helios::Disk::Disk
Disk(uint a_OID, const std::vector< uint > &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:4009
-
helios::Disk::setSubdivisionCount
void setSubdivisionCount(int2 subdiv)
Set the number of disk sub-triangle divisions.
Definition: Context.cpp:4065
-
helios::Polymesh
Polymesh compound object class.
Definition: Context.h:828
-
helios::Polymesh::Polymesh
Polymesh(uint a_OID, const std::vector< uint > &a_UUIDs, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:4069
-
helios::Polymesh::getVolume
float getVolume() const
Get the volume of the polymesh object.
Definition: Context.cpp:4088
-
helios::Sphere
Sphere compound object class.
Definition: Context.h:624
-
helios::Sphere::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-patch divisions of the sphere object.
Definition: Context.cpp:3455
-
helios::Sphere::getRadius
helios::vec3 getRadius() const
Get the radius of the sphere.
Definition: Context.cpp:3417
-
helios::Sphere::getVolume
float getVolume() const
Get the volume of the sphere object.
Definition: Context.cpp:3463
-
helios::Sphere::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the sphere object.
Definition: Context.cpp:3439
-
helios::Sphere::Sphere
Sphere(uint a_OID, const std::vector< uint > &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:3397
-
helios::Sphere::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of sphere tesselation divisions.
Definition: Context.cpp:3459
-
helios::Texture
Texture map data structure.
Definition: Context.h:67
-
helios::Texture::getTextureFile
std::string getTextureFile() const
Get the name/path of the texture map file.
Definition: Context.cpp:129
-
helios::Texture::hasTransparencyChannel
bool hasTransparencyChannel() const
Check whether the texture has a transparency channel.
Definition: Context.cpp:137
-
helios::Texture::getImageResolution
helios::int2 getImageResolution() const
Get the size of the texture in pixels (horizontal x vertical)
Definition: Context.cpp:133
-
helios::Texture::getSolidFraction
float getSolidFraction() const
Get the solid fraction of the texture transparency channel (if it exists)
Definition: Context.cpp:145
-
helios::Texture::getTransparencyData
const std::vector< std::vector< bool > > * getTransparencyData() const
Get the data in the texture transparency channel (if it exists)
Definition: Context.cpp:141
-
helios::Tile
Tile compound object class.
Definition: Context.h:581
-
helios::Tile::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the tile object.
Definition: Context.cpp:3326
-
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition: Context.cpp:3343
-
helios::Tile::setSubdivisionCount
void setSubdivisionCount(const helios::int2 &subdiv)
Set the number of tile sub-patch divisions.
Definition: Context.cpp:3347
-
helios::Tile::getTextureUV
std::vector< helios::vec2 > getTextureUV() const
Get the normalized (u,v) coordinates of the texture at each of the four corners of the tile object.
Definition: Context.cpp:3391
-
helios::Tile::getSize
helios::vec2 getSize() const
Get the dimensions of the entire tile object.
Definition: Context.cpp:3319
-
helios::Tile::getVertices
std::vector< helios::vec3 > getVertices() const
Get the Cartesian coordinates of each of the four corners of the tile object.
Definition: Context.cpp:3352
-
helios::Tile::getNormal
vec3 getNormal() const
Get a unit vector normal to the tile object surface.
Definition: Context.cpp:3385
-
helios::Tile::Tile
Tile(uint a_OID, const std::vector< uint > &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:3299
-
helios::Tube
Tube compound object class.
Definition: Context.h:660
-
helios::Tube::Tube
Tube(uint a_OID, const std::vector< uint > &a_UUIDs, const std::vector< vec3 > &a_nodes, const std::vector< float > &a_radius, const std::vector< helios::RGBcolor > &a_colors, const std::vector< std::vector< helios::vec3 > > &a_triangle_vertices, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition: Context.cpp:3468
-
helios::Tube::getSegmentVolume
float getSegmentVolume(uint segment_index) const
Get the volume of a segment within the tube object.
Definition: Context.cpp:3561
-
helios::Tube::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the tube object nodes.
Definition: Context.cpp:3508
-
helios::Tube::scaleTubeGirth
void scaleTubeGirth(float S)
Scale the girth of the tube object.
Definition: Context.cpp:3826
-
helios::Tube::setTubeRadii
void setTubeRadii(const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition: Context.cpp:3846
-
helios::Tube::getTriangleVertices
std::vector< std::vector< helios::vec3 > > getTriangleVertices() const
Get positions of triangle vertices comprising the tube object.
Definition: Context.cpp:3529
-
helios::Tube::getVolume
float getVolume() const
Get the volume of the tube object.
Definition: Context.cpp:3547
-
helios::Tube::appendTubeSegment
void appendTubeSegment(const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color)
Append an additional segment to the existing tube object.
Definition: Context.cpp:3575
-
helios::Tube::getNodeColors
std::vector< helios::RGBcolor > getNodeColors() const
Get the colors at each of the tube object nodes.
Definition: Context.cpp:3525
-
helios::Tube::getNodes
std::vector< helios::vec3 > getNodes() const
Get the Cartesian coordinates of each of the tube object nodes.
Definition: Context.cpp:3493
-
helios::Tube::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the tube object.
Definition: Context.cpp:3533
-
helios::Tube::scaleTubeLength
void scaleTubeLength(float S)
Scale the length of the tube object.
Definition: Context.cpp:3869
-
helios::Tube::getLength
float getLength() const
Get the length of the tube object.
Definition: Context.cpp:3537
-
helios::Tube::setTubeNodes
void setTubeNodes(const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition: Context.cpp:3895
-
helios::PNGHasAlpha
bool PNGHasAlpha(const char *filename)
Check whether PNG image file has an alpha/transparency channel.
Definition: global.cpp:1434
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::matmult
void matmult(const float ML[16], const float MR[16], float(&T)[16])
Multiply 4x4 matrices: T=ML*MR.
Definition: global.cpp:499
-
helios::CalendarDay
Date CalendarDay(int Julian_day, int year)
Convert Julian day to calendar day (day,month,year)
Definition: global.cpp:1307
-
helios::getFileExtension
std::string getFileExtension(const std::string &filepath)
Parse a file string to get the extension.
Definition: global.cpp:3075
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::JulianDay
int JulianDay(int day, int month, int year)
Convert calendar day (day,month,year) to Julian day.
Definition: global.cpp:1350
-
helios::nullorigin
vec3 nullorigin
Default null vec3 that gives the origin (0,0,0)
Definition: global.cpp:58
-
helios::getImageResolutionJPEG
helios::int2 getImageResolutionJPEG(const std::string &filename)
Function to read a JPEG image file into pixel data array.
Definition: global.cpp:1826
-
helios::readPNG
void readPNG(const std::string &filename, uint &width, uint &height, std::vector< helios::RGBAcolor > &pixel_data)
Function to read a PNG image file into pixel data array.
Definition: global.cpp:1587
-
helios::getFileStem
std::string getFileStem(const std::string &filepath)
Parse a file string to get the filename without extension.
Definition: global.cpp:3080
-
helios::makeIdentityMatrix
void makeIdentityMatrix(float(&T)[16])
Construct an identity matrix.
Definition: global.cpp:555
-
helios::nullrotation
SphericalCoord nullrotation
Default null SphericalCoord that applies no rotation.
Definition: global.cpp:57
-
helios::readPNGAlpha
std::vector< std::vector< bool > > readPNGAlpha(const std::string &filename)
Function to read the alpha channel from a PNG image.
Definition: global.cpp:1488
-
helios::vecmult
void vecmult(const float M[16], const float v[3], float(&result)[3])
Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
Definition: global.cpp:539
-
helios::writePNG
void writePNG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBAcolor > &pixel_data)
Function to write a PNG image based on pixel data.
Definition: global.cpp:1676
-
helios::Context::addDiskObject
uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition: Context.cpp:5256
-
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:4728
-
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition: Context.cpp:5426
-
helios::Context::addDisk
std::vector< uint > addDisk(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition: Context.cpp:6356
-
helios::Context::addBox
std::vector< uint > addBox(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition: Context.cpp:6147
-
helios::Context::addBoxObject
uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition: Context.cpp:5000
-
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition: Context.cpp:5399
-
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:5646
-
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:5930
-
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:5809
-
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:4550
-
helios::Context::addCone
std::vector< uint > addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone to the Context.
Definition: Context.cpp:6459
-
helios::Context::addSphereObject
uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:4310
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::makeRotationMatrix
void makeRotationMatrix(float rotation, const char *axis, float(&transform)[16])
Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
Definition: global.cpp:313
-
helios::makeTranslationMatrix
void makeTranslationMatrix(const helios::vec3 &translation, float(&transform)[16])
Construct translation matrix.
Definition: global.cpp:436
-
helios::calculateTriangleArea
float calculateTriangleArea(const vec3 &v0, const vec3 &v1, const vec3 &v2)
Calculate the area of a triangle given its three vertices.
Definition: global.cpp:175
-
helios::resize_vector
void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
Resize 2D C++ vector.
Definition: global.cpp:1239
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::makeScaleMatrix
void makeScaleMatrix(const helios::vec3 &scale, float(&T)[16])
Construct matrix to scale about the origin.
Definition: global.cpp:457
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition: global.cpp:1084
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition: Context.cpp:1759
-
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition: Context.cpp:1372
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::Context::setCurrentTimeseriesPoint
void setCurrentTimeseriesPoint(const char *label, uint index)
Set the Context date and time by providing the index of a timeseries data point.
Definition: Context.cpp:1886
-
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition: Context.cpp:1958
-
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition: Context.cpp:2014
-
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition: Context.cpp:1894
-
helios::Context::doesTimeseriesVariableExist
bool doesTimeseriesVariableExist(const char *label) const
Query whether a timeseries variable exists.
Definition: Context.cpp:2026
-
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition: Context.cpp:1823
-
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition: Context.cpp:1994
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_Time
Time make_Time(int hour, int minute)
Make a Time vector.
Definition: helios_vector_types.h:1427
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_Location
Location make_Location(float latitude_deg, float longitude_deg, float UTC_offset)
Make a Location vector.
Definition: helios_vector_types.h:1518
-
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition: helios_vector_types.h:1133
-
helios::make_Date
Date make_Date(int day, int month, int year)
Make a Date vector.
Definition: helios_vector_types.h:1241
-
helios::Julian2Calendar
Date Julian2Calendar(int JulianDay, int year)
Convert a Julian day to a calendar Date vector.
Definition: helios_vector_types.h:1268
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
- -
helios::Date::month
int month
Month of year.
Definition: helios_vector_types.h:1174
-
helios::Date::day
int day
Day of month.
Definition: helios_vector_types.h:1172
-
helios::Date::JulianDay
int JulianDay() const
Convert to Julian day.
Definition: global.cpp:186
-
helios::Date::year
int year
Year in YYYY format.
Definition: helios_vector_types.h:1176
-
helios::Location
Location vector.
Definition: helios_vector_types.h:1470
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
- -
helios::Time::second
int second
Second of minute.
Definition: helios_vector_types.h:1355
-
helios::Time::hour
int hour
Hour of day.
Definition: helios_vector_types.h:1359
-
helios::Time::minute
int minute
Minute of hour.
Definition: helios_vector_types.h:1357
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
+
helios::HeliosDataType
HeliosDataType
Data types.
Definition Context.h:41
+
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition Context.h:59
+
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition Context.h:49
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
+
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition Context.h:43
+
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition Context.h:63
+
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition Context.h:53
+
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition Context.h:61
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition Context.h:57
+
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition Context.h:55
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
+
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition Context.h:31
+
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition Context.h:33
+
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition Context.h:37
+
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition Context.h:35
+
helios::ObjectType
ObjectType
Type of compound object.
Definition Context.h:128
+
helios::OBJECT_TYPE_BOX
@ OBJECT_TYPE_BOX
Box.
Definition Context.h:136
+
helios::OBJECT_TYPE_POLYMESH
@ OBJECT_TYPE_POLYMESH
< Triangular Mesh
Definition Context.h:140
+
helios::OBJECT_TYPE_TUBE
@ OBJECT_TYPE_TUBE
Tube.
Definition Context.h:134
+
helios::OBJECT_TYPE_CONE
@ OBJECT_TYPE_CONE
< Cone/tapered cylinder
Definition Context.h:142
+
helios::OBJECT_TYPE_DISK
@ OBJECT_TYPE_DISK
< Disk
Definition Context.h:138
+
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition Context.h:130
+
helios::OBJECT_TYPE_SPHERE
@ OBJECT_TYPE_SPHERE
< Sphere
Definition Context.h:132
+
helios::Box
Box compound object class.
Definition Context.h:759
+
helios::Box::getVolume
float getVolume() const
Get the volume of the box object.
Definition Context.cpp:4004
+
helios::Box::setSubdivisionCount
void setSubdivisionCount(const helios::int3 &subdiv)
Set the number of box sub-patch divisions.
Definition Context.cpp:4000
+
helios::Box::getSubdivisionCount
helios::int3 getSubdivisionCount() const
Get the number of sub-patch divisions of the box object in each Cartesian direction.
Definition Context.cpp:3996
+
helios::Box::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the box object.
Definition Context.cpp:3980
+
helios::Box::Box
Box(uint a_OID, const std::vector< uint > &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3941
+
helios::Box::getSize
vec3 getSize() const
Get the dimensions of the box object in each Cartesian direction.
Definition Context.cpp:3961
+ +
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition Context.cpp:2377
+
helios::CompoundObject::setPrimitiveUUIDs
void setPrimitiveUUIDs(const std::vector< uint > &UUIDs)
Method to set the UUIDs of object child primitives.
Definition Context.cpp:2517
+
helios::CompoundObject::getPrimitiveCount
uint getPrimitiveCount() const
Return the number of primitives contained in the object.
Definition Context.cpp:2251
+
helios::CompoundObject::overrideTextureColor
void overrideTextureColor()
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:2321
+
helios::CompoundObject::getObjectID
uint getObjectID() const
Get the unique identifier for the object.
Definition Context.cpp:2243
+
helios::CompoundObject::getTextureFile
std::string getTextureFile() const
Method to return the texture map file of an Object.
Definition Context.cpp:2349
+
helios::CompoundObject::scale
void scale(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2471
+
helios::CompoundObject::deleteChildPrimitive
void deleteChildPrimitive(uint UUID)
Delete a single child member of the object.
Definition Context.cpp:2521
+
helios::CompoundObject::hasTexture
bool hasTexture() const
Method to check whether this object has texture data.
Definition Context.cpp:2341
+
helios::CompoundObject::setTransformationMatrix
void setTransformationMatrix(float(&T)[16])
Method to set the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2509
+
helios::CompoundObject::scaleAboutCenter
void scaleAboutCenter(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2475
+
helios::CompoundObject::scaleAboutPoint
void scaleAboutPoint(const helios::vec3 &scale, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2479
+
helios::CompoundObject::arePrimitivesComplete
bool arePrimitivesComplete() const
Method to query whether all object primitives are in tact.
Definition Context.cpp:2536
+
helios::CompoundObject::getArea
float getArea() const
Calculate the total one-sided surface area of the Compound Object.
Definition Context.cpp:2285
+
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition Context.cpp:2353
+
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2247
+
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition Context.cpp:2256
+
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2503
+
helios::CompoundObject::setColor
void setColor(const helios::RGBcolor &color)
Method to set the diffuse color for all primitives in the Compound Object.
Definition Context.cpp:2301
+
helios::CompoundObject::useTextureColor
void useTextureColor()
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition Context.cpp:2331
+
helios::CompoundObject::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint UUID)
Check whether a primitive is a member of the object based on its UUID.
Definition Context.cpp:2262
+
helios::CompoundObject::getObjectCenter
helios::vec3 getObjectCenter() const
Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
Definition Context.cpp:2268
+
helios::Cone
Cone compound object class.
Definition Context.h:847
+
helios::Cone::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the cone object.
Definition Context.cpp:4171
+
helios::Cone::Cone
Cone(uint a_OID, const std::vector< uint > &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:4107
+
helios::Cone::getNodeRadius
float getNodeRadius(int node_index) const
Get the radius of a cone object node.
Definition Context.cpp:4163
+
helios::Cone::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of radial sub-triangle divisions.
Definition Context.cpp:4175
+
helios::Cone::getNodeCoordinate
helios::vec3 getNodeCoordinate(int node_index) const
Get the Cartesian coordinates of a cone object node.
Definition Context.cpp:4144
+
helios::Cone::getAxisUnitVector
helios::vec3 getAxisUnitVector() const
Get a unit vector pointing in the direction of the cone central axis.
Definition Context.cpp:4179
+
helios::Cone::getNodeCoordinates
std::vector< helios::vec3 > getNodeCoordinates() const
Get the Cartesian coordinates of each of the cone object nodes.
Definition Context.cpp:4130
+
helios::Cone::scaleLength
void scaleLength(float S)
Method to scale the length of the cone.
Definition Context.cpp:4212
+
helios::Cone::scaleGirth
void scaleGirth(float S)
Method to scale the girth of the cone.
Definition Context.cpp:4261
+
helios::Cone::getLength
float getLength() const
Get the length of the cone along the axial direction.
Definition Context.cpp:4197
+
helios::Cone::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the cone object nodes.
Definition Context.cpp:4159
+
helios::Cone::getVolume
float getVolume() const
Get the volume of the cone object.
Definition Context.cpp:4302
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition Context_data.cpp:1192
+
helios::Context::getTileObjectTextureUV
std::vector< helios::vec2 > getTileObjectTextureUV(uint ObjID) const
get the texture UV coordinates of a tile object from the context
Definition Context.cpp:8132
+
helios::Context::setTileObjectSubdivisionCount
void setTileObjectSubdivisionCount(const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
Change the subdivision count of a tile object.
Definition Context.cpp:2982
+
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition Context.cpp:7139
+
helios::Context::getPrimitiveTransformationMatrix
void getPrimitiveTransformationMatrix(uint UUID, float(&T)[16]) const
Method to return the Affine transformation matrix of a Primitive.
Definition Context.cpp:7108
+
helios::Context::scaleTubeLength
void scaleTubeLength(uint ObjID, float scale_factor)
Scale the length of a tube object by an arbitrary factor for all tube nodes.
Definition Context.cpp:8208
+
helios::Context::isObjectHidden
bool isObjectHidden(uint ObjID) const
Query if an object is hidden.
Definition Context.cpp:7913
+
helios::Context::listTimeseriesVariables
std::vector< std::string > listTimeseriesVariables() const
List all existing timeseries variables.
Definition Context.cpp:2036
+
helios::Context::scaleObjectAboutPoint
void scaleObjectAboutPoint(uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2897
+
helios::Context::getTubeObjectSegmentVolume
float getTubeObjectSegmentVolume(uint ObjID, uint segment_index) const
get the volume of a segment within a Tube object
Definition Context.cpp:8176
+
helios::Context::getPrimitiveColor
helios::RGBcolor getPrimitiveColor(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition Context.cpp:7127
+
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition Context.cpp:2642
+
helios::Context::randn
float randn()
Draw a random number from a normal distribution with mean = 0, stddev = 1.
Definition Context.cpp:1204
+
helios::Context::getDiskObjectPointer
Disk * getDiskObjectPointer(uint ObjID) const
Get a pointer to a Disk Compound Object.
Definition Context.cpp:4022
+
helios::Context::overrideObjectTextureColor
void overrideObjectTextureColor(uint ObjID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7978
+
helios::Context::getUniquePrimitiveParentObjectIDs
std::vector< uint > getUniquePrimitiveParentObjectIDs(const std::vector< uint > &UUIDs) const
Method to return unique parent object IDs for a vector of primitive UUIDs.
Definition Context.cpp:7022
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::getObjectBoundingBox
void getObjectBoundingBox(uint ObjID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single object.
Definition Context.cpp:7998
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getBoxObjectPointer
Box * getBoxObjectPointer(uint ObjID) const
Get a pointer to a Box Compound Object.
Definition Context.cpp:3954
+
helios::Context::cleanDeletedUUIDs
void cleanDeletedUUIDs(std::vector< uint > &UUIDs) const
Delete UUIDs from vector if primitives no longer exist (1D vector)
Definition Context.cpp:1793
+
helios::Context::getConeObjectSubdivisionCount
uint getConeObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Cone object from the context
Definition Context.cpp:8250
+
helios::Context::getDiskObjectCenter
helios::vec3 getDiskObjectCenter(uint ObjID) const
get the center of a Disk object from the context
Definition Context.cpp:8238
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::getJulianDate
int getJulianDate() const
Get simulation date by Julian day.
Definition Context.cpp:1132
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::getBoxObjectSubdivisionCount
helios::int3 getBoxObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Box object from the context
Definition Context.cpp:8230
+
helios::Context::getTubeObjectSubdivisionCount
uint getTubeObjectSubdivisionCount(uint ObjectID) const
get the subdivision count of a Tube object from the context
Definition Context.cpp:8156
+
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:2983
+
helios::Context::~Context
~Context()
Context destructor.
Definition Context.cpp:6970
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition Context.cpp:2589
+
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition Context.cpp:4123
+
helios::Context::seedRandomGenerator
void seedRandomGenerator(uint seed)
Set seed for random generator.
Definition Context.cpp:45
+
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition Context_data.cpp:2815
+
helios::Context::printPrimitiveInfo
void printPrimitiveInfo(uint UUID) const
Prints primitive properties to console (useful for debugging purposes)
Definition Context.cpp:7225
+
helios::Context::markGeometryClean
void markGeometryClean()
Mark the Context geometry as "clean", meaning that the geometry has not been modified since last set ...
Definition Context.cpp:149
+
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition Context.cpp:2116
+
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition Context.cpp:2847
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::getPatchCenter
helios::vec3 getPatchCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a patch element.
Definition Context.cpp:1693
+
helios::Context::getTileObjectSize
helios::vec2 getTileObjectSize(uint ObjID) const
get the size of a tile object from the context
Definition Context.cpp:8120
+
helios::Context::getObjectPrimitiveCount
uint getObjectPrimitiveCount(uint ObjID) const
Method to return the number of primitives contained in the object.
Definition Context.cpp:7924
+
helios::Context::getPrimitiveDataSize
uint getPrimitiveDataSize(uint UUID, const char *label) const
Get the size/length of primitive data.
Definition Context_data.cpp:1162
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition Context.cpp:7135
+
helios::Context::getBoxObjectSize
helios::vec3 getBoxObjectSize(uint ObjID) const
get the size of a Box object from the context
Definition Context.cpp:8226
+
helios::Context::getSphereObjectCenter
helios::vec3 getSphereObjectCenter(uint ObjID) const
get the center of a Sphere object from the context
Definition Context.cpp:8140
+
helios::Context::getObjectCenter
helios::vec3 getObjectCenter(uint ObjID) const
Method to return the Cartesian (x,y,z) point of the center of a bounding box for the object.
Definition Context.cpp:7928
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getObjectCount
uint getObjectCount() const
Get the total number of objects that have been created in the Context.
Definition Context.cpp:2581
+
helios::Context::getConeObjectNode
helios::vec3 getConeObjectNode(uint ObjID, int number) const
get a node of a Cone object from the context
Definition Context.cpp:8262
+
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition Context.cpp:8172
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::cropDomainZ
void cropDomainZ(const vec2 &zbounds)
Crop the domain in the z-direction such that all primitives lie within some specified z interval.
Definition Context.cpp:2190
+
helios::Context::getPolymeshObjectPointer
Polymesh * getPolymeshObjectPointer(uint ObjID) const
Get a pointer to a Polygon Mesh Compound Object.
Definition Context.cpp:4081
+
helios::Context::cropDomainX
void cropDomainX(const vec2 &xbounds)
Crop the domain in the x-direction such that all primitives lie within some specified x interval.
Definition Context.cpp:2144
+
helios::Context::getSphereObjectRadius
helios::vec3 getSphereObjectRadius(uint ObjID) const
get the radius of a Sphere object from the context
Definition Context.cpp:8144
+
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition Context.cpp:1059
+
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:6988
+
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition Context.cpp:7179
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::usePrimitiveTextureColor
void usePrimitiveTextureColor(uint UUID)
Use the texture map to color the primitive rather than the constant RGB color. This is function rever...
Definition Context.cpp:7207
+
helios::Context::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint ObjID, uint UUID)
Method to check if an Object contains a Primitive.
Definition Context.cpp:7974
+
helios::Context::getMonthString
const char * getMonthString() const
Get a string corresponding to the month of the simulation date.
Definition Context.cpp:1103
+
helios::Context::filterObjectsByData
std::vector< uint > filterObjectsByData(const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
Get a vector of object IDs that meet filtering criteria based on object data.
Definition Context.cpp:2750
+
helios::Context::setObjectColor
void setObjectColor(uint ObjID, const helios::RGBcolor &color)
Method to set the diffuse color of an Object.
Definition Context.cpp:7954
+
helios::Context::setTriangleVertices
void setTriangleVertices(uint UUID, const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
//! Manually set the Triangle vertices
Definition Context.cpp:1722
+
helios::Context::appendTubeSegment
void appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
Append a tube segment to an existing tube object.
Definition Context.cpp:8180
+
helios::Context::isGeometryDirty
bool isGeometryDirty() const
Query whether the Context geometry is "dirty", meaning has the geometry been modified since last set ...
Definition Context.cpp:157
+
helios::Context::getTileObjectNormal
helios::vec3 getTileObjectNormal(uint ObjID) const
get the normal of a tile object from the context
Definition Context.cpp:8128
+
helios::Context::Context
Context()
Context default constructor.
Definition Context.cpp:20
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition Context.cpp:1741
+
helios::Context::getTubeObjectNodeRadii
std::vector< float > getTubeObjectNodeRadii(uint ObjID) const
get the node radii of a Tube object from the context
Definition Context.cpp:8164
+
helios::Context::getPrimitiveSolidFraction
float getPrimitiveSolidFraction(uint UUID) const
Get fraction of primitive surface area that is non-transparent.
Definition Context.cpp:7221
+
helios::Context::translateObject
void translateObject(uint ObjID, const vec3 &shift)
Translate a single compound object.
Definition Context.cpp:2837
+
helios::Context::scaleObjectAboutCenter
void scaleObjectAboutCenter(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2887
+
helios::Context::cropDomainY
void cropDomainY(const vec2 &ybounds)
Crop the domain in the y-direction such that all primitives lie within some specified y interval.
Definition Context.cpp:2167
+
helios::Context::getObjectType
helios::ObjectType getObjectType(uint ObjID) const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2940
+
helios::Context::colorPrimitiveByDataPseudocolor
void colorPrimitiveByDataPseudocolor(const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors)
Overwrite primitive color based on a pseudocolor mapping of primitive data values.
Definition Context.cpp:6666
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getTubeObjectNodeColors
std::vector< RGBcolor > getTubeObjectNodeColors(uint ObjID) const
get the node colors of a Tube object from the context
Definition Context.cpp:8168
+
helios::Context::listPrimitiveData
std::vector< std::string > listPrimitiveData(uint UUID) const
Return labels for all primitive data for this particular primitive.
Definition Context_data.cpp:1268
+
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition Context.cpp:2907
+
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition Context.cpp:1578
+
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition Context.cpp:7167
+
helios::Context::getTriangleVertex
helios::vec3 getTriangleVertex(uint UUID, uint number) const
Get a single vertex of a Triangle based on an index.
Definition Context.cpp:1711
+
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition Context.cpp:1166
+
helios::Context::getPrimitiveColorRGB
helios::RGBcolor getPrimitiveColorRGB(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition Context.cpp:7131
+
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Context.cpp:2046
+
helios::Context::getDiskObjectSubdivisionCount
uint getDiskObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Disk object from the context
Definition Context.cpp:8246
+
helios::Context::setPrimitiveTextureFile
void setPrimitiveTextureFile(uint UUID, const std::string &texturefile)
Set the texture map file for a primitive.
Definition Context.cpp:7163
+
helios::Context::getConeObjectNodes
std::vector< helios::vec3 > getConeObjectNodes(uint ObjID) const
get the nodes of a Cone object from the context
Definition Context.cpp:8254
+
helios::Context::hidePrimitive
void hidePrimitive(const std::vector< uint > &UUIDs)
Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()
Definition Context.cpp:1777
+
helios::Context::getSphereObjectPointer
Sphere * getSphereObjectPointer(uint ObjID) const
Get a pointer to a Sphere Compound Object.
Definition Context.cpp:3410
+
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7197
+
helios::Context::getTileObjectSubdivisionCount
helios::int2 getTileObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a tile object from the context
Definition Context.cpp:8124
+
helios::Context::isPrimitiveHidden
bool isPrimitiveHidden(uint UUID) const
Query whether a primitive is hidden.
Definition Context.cpp:1786
+
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition Context.cpp:1099
+
helios::Context::printObjectInfo
void printObjectInfo(uint ObjID) const
Prints object properties to console (useful for debugging purposes)
Definition Context.cpp:7499
+
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition Context.cpp:49
+
helios::Context::hideObject
void hideObject(const std::vector< uint > &ObjIDs)
Hide compound objects in the Context such that their object IDs are not returned in Context::getAllOb...
Definition Context.cpp:7901
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition Context.cpp:7187
+
helios::Context::getTileObjectAreaRatio
float getTileObjectAreaRatio(uint ObjectID) const
Get the area ratio of a tile object (total object area / sub-patch area)
Definition Context.cpp:2944
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::getTubeObjectNodes
std::vector< helios::vec3 > getTubeObjectNodes(uint ObjID) const
get the nodes of a Tube object from the context
Definition Context.cpp:8160
+
helios::Context::getTileObjectCenter
helios::vec3 getTileObjectCenter(uint ObjID) const
Get the Cartesian (x,y,z) center position of a tile object.
Definition Context.cpp:8116
+
helios::Context::scaleTubeGirth
void scaleTubeGirth(uint ObjID, float scale_factor)
Scale the girth for all nodes of a tube object.
Definition Context.cpp:8194
+
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition Context.cpp:7217
+
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition Context.cpp:2609
+
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition Context.cpp:7920
+
helios::Context::getObjectTextureFile
std::string getObjectTextureFile(uint ObjID) const
Method to return the texture map file of an Object.
Definition Context.cpp:7932
+
helios::Context::getPolymeshObjectVolume
float getPolymeshObjectVolume(uint ObjID) const
Get the volume of a Polygon Mesh object from the context.
Definition Context.cpp:8282
+
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition Context.cpp:1491
+
helios::Context::getTubeObjectPointer
Tube * getTubeObjectPointer(uint ObjID) const
Get a pointer to a Tube Compound Object.
Definition Context.cpp:3486
+
helios::Context::getPatchSize
helios::vec2 getPatchSize(uint UUID) const
Get the size of a patch element.
Definition Context.cpp:1684
+
helios::Context::getTileObjectVertices
std::vector< helios::vec3 > getTileObjectVertices(uint ObjID) const
get the vertices of a tile object from the context
Definition Context.cpp:8136
+
helios::Context::markGeometryDirty
void markGeometryDirty()
Mark the Context geometry as "dirty", meaning that the geometry has been modified since last set as c...
Definition Context.cpp:153
+
helios::Context::getPrimitiveBoundingBox
void getPrimitiveBoundingBox(uint UUID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single primitive.
Definition Context.cpp:7057
+
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition Context.cpp:7104
+
helios::Context::getObjectDataSize
uint getObjectDataSize(uint objID, const char *label) const
Get the size/length of primitive data.
Definition Context_data.cpp:2976
+
helios::Context::getConeObjectAxisUnitVector
helios::vec3 getConeObjectAxisUnitVector(uint ObjID) const
get the axis unit vector of a Cone object from the context
Definition Context.cpp:8270
+
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition Context.cpp:1750
+
helios::Context::getDiskObjectSize
helios::vec2 getDiskObjectSize(uint ObjID) const
get the size of a Disk object from the context
Definition Context.cpp:8242
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::areObjectPrimitivesComplete
bool areObjectPrimitivesComplete(uint objID) const
Method to query whether all object primitives are in tact.
Definition Context.cpp:2540
+
helios::Context::getConeObjectLength
float getConeObjectLength(uint ObjID) const
get the length of a Cone object from the context
Definition Context.cpp:8274
+
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition Context.cpp:3312
+
helios::Context::scalePrimitiveAboutPoint
void scalePrimitiveAboutPoint(uint UUID, const helios::vec3 &S, const helios::vec3 point)
Scale a primitive using its UUID about an arbitrary point in space.
Definition Context.cpp:1512
+
helios::Context::useObjectTextureColor
void useObjectTextureColor(uint ObjID)
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition Context.cpp:7988
+
helios::Context::getSphereObjectSubdivisionCount
uint getSphereObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Sphere object from the context
Definition Context.cpp:8148
+
helios::Context::setLocation
void setLocation(const helios::Location &location)
Set the location of the simulation (latitude, longitude, and UTC offset)
Definition Context.cpp:1170
+
helios::Context::listObjectData
std::vector< std::string > listObjectData(uint ObjID) const
Return labels for all object data for this particular object.
Definition Context_data.cpp:3083
+
helios::Context::getConeObjectNodeRadii
std::vector< float > getConeObjectNodeRadii(uint ObjID) const
get the node radii of a Cone object from the context
Definition Context.cpp:8258
+
helios::Context::getBoxObjectVolume
float getBoxObjectVolume(uint ObjID) const
get the volume of a Box object from the context
Definition Context.cpp:8234
+
helios::Context::copyObjectData
void copyObjectData(uint source_objID, uint destination_objID)
copy all object data from one compound object to another
Definition Context_data.cpp:2990
+
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition Context.cpp:1136
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::Context::getSphereObjectVolume
float getSphereObjectVolume(uint ObjID) const
get the volume of a Sphere object from the context
Definition Context.cpp:8152
+
helios::Context::setObjectTransformationMatrix
void setObjectTransformationMatrix(uint ObjID, float(&T)[16])
Method to set the Affine transformation matrix of an Object.
Definition Context.cpp:7940
+
helios::Context::cropDomain
void cropDomain(std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
Crop specified UUIDs such that they lie within some specified axis-aligned box.
Definition Context.cpp:2213
+
helios::Context::setTubeNodes
void setTubeNodes(uint ObjID, const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition Context.cpp:8215
+
helios::Context::getLocation
helios::Location getLocation() const
Get the location of the simulation (latitude, longitude, and UTC offset)
Definition Context.cpp:1174
+
helios::Context::getConeObjectNodeRadius
float getConeObjectNodeRadius(uint ObjID, int number) const
get a node radius of a Cone object from the context
Definition Context.cpp:8266
+
helios::Context::cleanDeletedObjectIDs
void cleanDeletedObjectIDs(std::vector< uint > &objIDs) const
Delete Object IDs from vector if objects no longer exist (1D vector)
Definition Context.cpp:2544
+
helios::Context::getConeObjectVolume
float getConeObjectVolume(uint ObjID) const
get the volume of a Cone object from the context
Definition Context.cpp:8278
+
helios::Context::getBoxObjectCenter
helios::vec3 getBoxObjectCenter(uint ObjID) const
get the center of a Box object from the context
Definition Context.cpp:8222
+
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:2969
+
helios::Context::setPrimitiveTransformationMatrix
void setPrimitiveTransformationMatrix(uint UUID, float(&T)[16])
Method to set the Affine transformation matrix of a Primitive.
Definition Context.cpp:7112
+
helios::Context::getObjectTransformationMatrix
void getObjectTransformationMatrix(uint ObjID, float(&T)[16]) const
Method to return the Affine transformation matrix of an Object.
Definition Context.cpp:7936
+
helios::Context::setTubeRadii
void setTubeRadii(uint ObjID, const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition Context.cpp:8201
+
helios::Context::objectHasTexture
bool objectHasTexture(uint ObjID) const
Method to check whether an Object has texture data.
Definition Context.cpp:7950
+
helios::Context::scaleObject
void scaleObject(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2877
+
helios::Disk
Disk compound object class.
Definition Context.h:795
+
helios::Disk::getSize
vec2 getSize() const
Get the lateral dimensions of the disk object.
Definition Context.cpp:4029
+
helios::Disk::getSubdivisionCount
int2 getSubdivisionCount() const
Get the number of sub-triangle divisions of the disk object.
Definition Context.cpp:4061
+
helios::Disk::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the disk object.
Definition Context.cpp:4045
+
helios::Disk::Disk
Disk(uint a_OID, const std::vector< uint > &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:4009
+
helios::Disk::setSubdivisionCount
void setSubdivisionCount(int2 subdiv)
Set the number of disk sub-triangle divisions.
Definition Context.cpp:4065
+
helios::Polymesh
Polymesh compound object class.
Definition Context.h:828
+
helios::Polymesh::Polymesh
Polymesh(uint a_OID, const std::vector< uint > &a_UUIDs, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:4069
+
helios::Polymesh::getVolume
float getVolume() const
Get the volume of the polymesh object.
Definition Context.cpp:4088
+
helios::Sphere
Sphere compound object class.
Definition Context.h:624
+
helios::Sphere::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-patch divisions of the sphere object.
Definition Context.cpp:3455
+
helios::Sphere::getRadius
helios::vec3 getRadius() const
Get the radius of the sphere.
Definition Context.cpp:3417
+
helios::Sphere::getVolume
float getVolume() const
Get the volume of the sphere object.
Definition Context.cpp:3463
+
helios::Sphere::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the sphere object.
Definition Context.cpp:3439
+
helios::Sphere::Sphere
Sphere(uint a_OID, const std::vector< uint > &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3397
+
helios::Sphere::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of sphere tesselation divisions.
Definition Context.cpp:3459
+
helios::Texture
Texture map data structure.
Definition Context.h:67
+
helios::Texture::getTextureFile
std::string getTextureFile() const
Get the name/path of the texture map file.
Definition Context.cpp:129
+
helios::Texture::hasTransparencyChannel
bool hasTransparencyChannel() const
Check whether the texture has a transparency channel.
Definition Context.cpp:137
+
helios::Texture::getImageResolution
helios::int2 getImageResolution() const
Get the size of the texture in pixels (horizontal x vertical)
Definition Context.cpp:133
+
helios::Texture::getSolidFraction
float getSolidFraction() const
Get the solid fraction of the texture transparency channel (if it exists)
Definition Context.cpp:145
+
helios::Texture::getTransparencyData
const std::vector< std::vector< bool > > * getTransparencyData() const
Get the data in the texture transparency channel (if it exists)
Definition Context.cpp:141
+
helios::Tile
Tile compound object class.
Definition Context.h:581
+
helios::Tile::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the tile object.
Definition Context.cpp:3326
+
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition Context.cpp:3343
+
helios::Tile::setSubdivisionCount
void setSubdivisionCount(const helios::int2 &subdiv)
Set the number of tile sub-patch divisions.
Definition Context.cpp:3347
+
helios::Tile::getTextureUV
std::vector< helios::vec2 > getTextureUV() const
Get the normalized (u,v) coordinates of the texture at each of the four corners of the tile object.
Definition Context.cpp:3391
+
helios::Tile::getSize
helios::vec2 getSize() const
Get the dimensions of the entire tile object.
Definition Context.cpp:3319
+
helios::Tile::getVertices
std::vector< helios::vec3 > getVertices() const
Get the Cartesian coordinates of each of the four corners of the tile object.
Definition Context.cpp:3352
+
helios::Tile::getNormal
vec3 getNormal() const
Get a unit vector normal to the tile object surface.
Definition Context.cpp:3385
+
helios::Tile::Tile
Tile(uint a_OID, const std::vector< uint > &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3299
+
helios::Tube
Tube compound object class.
Definition Context.h:660
+
helios::Tube::Tube
Tube(uint a_OID, const std::vector< uint > &a_UUIDs, const std::vector< vec3 > &a_nodes, const std::vector< float > &a_radius, const std::vector< helios::RGBcolor > &a_colors, const std::vector< std::vector< helios::vec3 > > &a_triangle_vertices, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3468
+
helios::Tube::getSegmentVolume
float getSegmentVolume(uint segment_index) const
Get the volume of a segment within the tube object.
Definition Context.cpp:3561
+
helios::Tube::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the tube object nodes.
Definition Context.cpp:3508
+
helios::Tube::scaleTubeGirth
void scaleTubeGirth(float S)
Scale the girth of the tube object.
Definition Context.cpp:3826
+
helios::Tube::setTubeRadii
void setTubeRadii(const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition Context.cpp:3846
+
helios::Tube::getTriangleVertices
std::vector< std::vector< helios::vec3 > > getTriangleVertices() const
Get positions of triangle vertices comprising the tube object.
Definition Context.cpp:3529
+
helios::Tube::getVolume
float getVolume() const
Get the volume of the tube object.
Definition Context.cpp:3547
+
helios::Tube::appendTubeSegment
void appendTubeSegment(const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color)
Append an additional segment to the existing tube object.
Definition Context.cpp:3575
+
helios::Tube::getNodeColors
std::vector< helios::RGBcolor > getNodeColors() const
Get the colors at each of the tube object nodes.
Definition Context.cpp:3525
+
helios::Tube::getNodes
std::vector< helios::vec3 > getNodes() const
Get the Cartesian coordinates of each of the tube object nodes.
Definition Context.cpp:3493
+
helios::Tube::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the tube object.
Definition Context.cpp:3533
+
helios::Tube::scaleTubeLength
void scaleTubeLength(float S)
Scale the length of the tube object.
Definition Context.cpp:3869
+
helios::Tube::getLength
float getLength() const
Get the length of the tube object.
Definition Context.cpp:3537
+
helios::Tube::setTubeNodes
void setTubeNodes(const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition Context.cpp:3895
+
helios::PNGHasAlpha
bool PNGHasAlpha(const char *filename)
Check whether PNG image file has an alpha/transparency channel.
Definition global.cpp:1434
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::matmult
void matmult(const float ML[16], const float MR[16], float(&T)[16])
Multiply 4x4 matrices: T=ML*MR.
Definition global.cpp:499
+
helios::CalendarDay
Date CalendarDay(int Julian_day, int year)
Convert Julian day to calendar day (day,month,year)
Definition global.cpp:1307
+
helios::getFileExtension
std::string getFileExtension(const std::string &filepath)
Parse a file string to get the extension.
Definition global.cpp:3075
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::JulianDay
int JulianDay(int day, int month, int year)
Convert calendar day (day,month,year) to Julian day.
Definition global.cpp:1350
+
helios::nullorigin
vec3 nullorigin
Default null vec3 that gives the origin (0,0,0)
Definition global.cpp:58
+
helios::getImageResolutionJPEG
helios::int2 getImageResolutionJPEG(const std::string &filename)
Function to read a JPEG image file into pixel data array.
Definition global.cpp:1826
+
helios::readPNG
void readPNG(const std::string &filename, uint &width, uint &height, std::vector< helios::RGBAcolor > &pixel_data)
Function to read a PNG image file into pixel data array.
Definition global.cpp:1587
+
helios::getFileStem
std::string getFileStem(const std::string &filepath)
Parse a file string to get the filename without extension.
Definition global.cpp:3080
+
helios::makeIdentityMatrix
void makeIdentityMatrix(float(&T)[16])
Construct an identity matrix.
Definition global.cpp:555
+
helios::nullrotation
SphericalCoord nullrotation
Default null SphericalCoord that applies no rotation.
Definition global.cpp:57
+
helios::readPNGAlpha
std::vector< std::vector< bool > > readPNGAlpha(const std::string &filename)
Function to read the alpha channel from a PNG image.
Definition global.cpp:1488
+
helios::vecmult
void vecmult(const float M[16], const float v[3], float(&result)[3])
Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
Definition global.cpp:539
+
helios::writePNG
void writePNG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBAcolor > &pixel_data)
Function to write a PNG image based on pixel data.
Definition global.cpp:1676
+
helios::Context::addDiskObject
uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition Context.cpp:5256
+
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:4728
+
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition Context.cpp:5426
+
helios::Context::addDisk
std::vector< uint > addDisk(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition Context.cpp:6356
+
helios::Context::addBox
std::vector< uint > addBox(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition Context.cpp:6147
+
helios::Context::addBoxObject
uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition Context.cpp:5000
+
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition Context.cpp:5399
+
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:5646
+
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:5930
+
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:5809
+
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:4550
+
helios::Context::addCone
std::vector< uint > addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone to the Context.
Definition Context.cpp:6459
+
helios::Context::addSphereObject
uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:4310
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::makeRotationMatrix
void makeRotationMatrix(float rotation, const char *axis, float(&transform)[16])
Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
Definition global.cpp:313
+
helios::makeTranslationMatrix
void makeTranslationMatrix(const helios::vec3 &translation, float(&transform)[16])
Construct translation matrix.
Definition global.cpp:436
+
helios::calculateTriangleArea
float calculateTriangleArea(const vec3 &v0, const vec3 &v1, const vec3 &v2)
Calculate the area of a triangle given its three vertices.
Definition global.cpp:175
+
helios::resize_vector
void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
Resize 2D C++ vector.
Definition global.cpp:1239
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::makeScaleMatrix
void makeScaleMatrix(const helios::vec3 &scale, float(&T)[16])
Construct matrix to scale about the origin.
Definition global.cpp:457
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition global.cpp:1084
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition Context.cpp:1759
+
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition Context.cpp:1372
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::Context::setCurrentTimeseriesPoint
void setCurrentTimeseriesPoint(const char *label, uint index)
Set the Context date and time by providing the index of a timeseries data point.
Definition Context.cpp:1886
+
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition Context.cpp:1958
+
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition Context.cpp:2014
+
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition Context.cpp:1894
+
helios::Context::doesTimeseriesVariableExist
bool doesTimeseriesVariableExist(const char *label) const
Query whether a timeseries variable exists.
Definition Context.cpp:2026
+
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition Context.cpp:1823
+
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition Context.cpp:1994
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_Time
Time make_Time(int hour, int minute)
Make a Time vector.
Definition helios_vector_types.h:1427
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_Location
Location make_Location(float latitude_deg, float longitude_deg, float UTC_offset)
Make a Location vector.
Definition helios_vector_types.h:1518
+
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition helios_vector_types.h:1133
+
helios::make_Date
Date make_Date(int day, int month, int year)
Make a Date vector.
Definition helios_vector_types.h:1241
+
helios::Julian2Calendar
Date Julian2Calendar(int JulianDay, int year)
Convert a Julian day to a calendar Date vector.
Definition helios_vector_types.h:1268
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+ +
helios::Date::month
int month
Month of year.
Definition helios_vector_types.h:1174
+
helios::Date::day
int day
Day of month.
Definition helios_vector_types.h:1172
+
helios::Date::JulianDay
int JulianDay() const
Convert to Julian day.
Definition global.cpp:186
+
helios::Date::year
int year
Year in YYYY format.
Definition helios_vector_types.h:1176
+ +
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBAcolor::r
float r
Red color component.
Definition helios_vector_types.h:1029
+
helios::RGBAcolor::b
float b
Blue color component.
Definition helios_vector_types.h:1035
+
helios::RGBAcolor::g
float g
Green color component.
Definition helios_vector_types.h:1032
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+ +
helios::Time::second
int second
Second of minute.
Definition helios_vector_types.h:1355
+
helios::Time::hour
int hour
Hour of day.
Definition helios_vector_types.h:1359
+
helios::Time::minute
int minute
Minute of hour.
Definition helios_vector_types.h:1357
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_context_8h.html b/doc/html/_context_8h.html index c9832be0b..a9051e71c 100644 --- a/doc/html/_context_8h.html +++ b/doc/html/_context_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | @@ -140,42 +152,42 @@ - - + - - + - - +

Enumerations

enum  helios::PrimitiveType { helios::PRIMITIVE_TYPE_PATCH = 0 -, helios::PRIMITIVE_TYPE_TRIANGLE = 1 -, helios::PRIMITIVE_TYPE_VOXEL = 2 +
enum  helios::PrimitiveType { helios::PRIMITIVE_TYPE_PATCH = 0 +, helios::PRIMITIVE_TYPE_TRIANGLE = 1 +, helios::PRIMITIVE_TYPE_VOXEL = 2 }
 Type of primitive element. More...
 Type of primitive element. More...
 
enum  helios::HeliosDataType {
-  helios::HELIOS_TYPE_INT = 0 -, helios::HELIOS_TYPE_UINT = 1 -, helios::HELIOS_TYPE_FLOAT = 2 -, helios::HELIOS_TYPE_DOUBLE = 3 +
enum  helios::HeliosDataType {
+  helios::HELIOS_TYPE_INT = 0 +, helios::HELIOS_TYPE_UINT = 1 +, helios::HELIOS_TYPE_FLOAT = 2 +, helios::HELIOS_TYPE_DOUBLE = 3 ,
-  helios::HELIOS_TYPE_VEC2 = 4 -, helios::HELIOS_TYPE_VEC3 = 5 -, helios::HELIOS_TYPE_VEC4 = 6 -, helios::HELIOS_TYPE_INT2 = 7 +  helios::HELIOS_TYPE_VEC2 = 4 +, helios::HELIOS_TYPE_VEC3 = 5 +, helios::HELIOS_TYPE_VEC4 = 6 +, helios::HELIOS_TYPE_INT2 = 7 ,
-  helios::HELIOS_TYPE_INT3 = 8 -, helios::HELIOS_TYPE_INT4 = 9 -, helios::HELIOS_TYPE_STRING = 10 +  helios::HELIOS_TYPE_INT3 = 8 +, helios::HELIOS_TYPE_INT4 = 9 +, helios::HELIOS_TYPE_STRING = 10
}
 Data types. More...
 Data types. More...
 
enum  helios::ObjectType {
-  helios::OBJECT_TYPE_TILE = 0 -, helios::OBJECT_TYPE_SPHERE = 1 -, helios::OBJECT_TYPE_TUBE = 2 -, helios::OBJECT_TYPE_BOX = 3 +
enum  helios::ObjectType {
+  helios::OBJECT_TYPE_TILE = 0 +, helios::OBJECT_TYPE_SPHERE = 1 +, helios::OBJECT_TYPE_TUBE = 2 +, helios::OBJECT_TYPE_BOX = 3 ,
-  helios::OBJECT_TYPE_DISK = 4 -, helios::OBJECT_TYPE_POLYMESH = 5 -, helios::OBJECT_TYPE_CONE = 6 +  helios::OBJECT_TYPE_DISK = 4 +, helios::OBJECT_TYPE_POLYMESH = 5 +, helios::OBJECT_TYPE_CONE = 6
}
 Type of compound object. More...
 Type of compound object. More...
 

Detailed Description

@@ -193,7 +205,7 @@

- +
enum helios::HeliosDataTypeenum helios::HeliosDataType

@@ -235,7 +247,7 @@

- +
enum helios::ObjectTypeenum helios::ObjectType

@@ -269,7 +281,7 @@

- +
enum helios::PrimitiveTypeenum helios::PrimitiveType

@@ -291,7 +303,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_context_8h_source.html b/doc/html/_context_8h_source.html index 2ad939a82..e35a69ef7 100644 --- a/doc/html/_context_8h_source.html +++ b/doc/html/_context_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Context.h
@@ -105,12 +117,15 @@
27
28class Context; //forward declaration of Context class
29
+
39
+
65
+
67class Texture{
68public:
69
@@ -150,7 +167,9 @@
97 helios::int2 image_resolution;
98 float solidfraction{};
99};
+
100
+
102struct GlobalData{
103
104 std::vector<int> global_data_int;
@@ -170,12 +189,14 @@
118 HeliosDataType type;
119
120};
+
121
122//--------------------- GEOMETRIC PRIMITIVES -----------------------------------//
123
124
125//---------- COMPOUND OBJECTS ----------------//
126
+
144
+
145class CompoundObject{
146public:
147
@@ -400,11 +423,13 @@
576 bool ishidden = false;
577
578};
+
579
+
581class Tile : public CompoundObject {
582public:
583
-
585 Tile(uint a_OID, const std::vector<uint> &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context);
+
585 Tile(uint a_OID, const std::vector<uint> &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context);
586
588 ~Tile() override = default;
589
@@ -430,11 +455,13 @@
619 friend class CompoundObject;
620
621};
+
622
+
624class Sphere : public CompoundObject {
625public:
626
-
628 Sphere(uint a_OID, const std::vector<uint> &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context);
+
628 Sphere(uint a_OID, const std::vector<uint> &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context);
629
631 ~Sphere() override = default;
632
@@ -456,11 +483,13 @@
655 friend class CompoundObject;
656
657};
+
658
+
660class Tube : public CompoundObject {
661public:
662
-
664 Tube(uint a_OID, const std::vector<uint> &a_UUIDs, const std::vector<vec3> &a_nodes, const std::vector<float> &a_radius, const std::vector<helios::RGBcolor> &a_colors, const std::vector<std::vector<helios::vec3>> &a_triangle_vertices,
+
664 Tube(uint a_OID, const std::vector<uint> &a_UUIDs, const std::vector<vec3> &a_nodes, const std::vector<float> &a_radius, const std::vector<helios::RGBcolor> &a_colors, const std::vector<std::vector<helios::vec3>> &a_triangle_vertices,
665 uint a_subdiv, const char *a_texturefile, helios::Context *a_context);
666
668 ~Tube() override = default;
@@ -519,11 +548,13 @@
754 friend class CompoundObject;
755
756};
+
757
+
759class Box : public CompoundObject {
760public:
761
-
763 Box(uint a_OID, const std::vector<uint> &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context);
+
763 Box(uint a_OID, const std::vector<uint> &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context);
764
766 ~Box() override = default;
767
@@ -545,11 +576,13 @@
790 friend class CompoundObject;
791
792};
+
793
+
795class Disk : public CompoundObject {
796public:
797
-
799 Disk(uint a_OID, const std::vector<uint> &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context);
+
799 Disk(uint a_OID, const std::vector<uint> &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context);
800
802 ~Disk() override = default;
803
@@ -569,11 +602,13 @@
823 friend class CompoundObject;
824
825};
+
826
+
828class Polymesh : public CompoundObject {
829public:
830
-
832 Polymesh(uint a_OID, const std::vector<uint> &a_UUIDs, const char *a_texturefile, helios::Context *a_context);
+
832 Polymesh(uint a_OID, const std::vector<uint> &a_UUIDs, const char *a_texturefile, helios::Context *a_context);
833
835 ~Polymesh() override = default;
836
@@ -584,11 +619,13 @@
842 friend class CompoundObject;
843
844};
+
845
+
847class Cone : public CompoundObject {
848public:
849
-
851 Cone(uint a_OID, const std::vector<uint> &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context);
+
851 Cone(uint a_OID, const std::vector<uint> &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context);
852
854 ~Cone() override = default;
855
@@ -631,6 +668,7 @@
919 friend class CompoundObject;
920
921};
+
922
923
925
@@ -1004,6 +1042,7 @@
1694
1695};
1696
+
1698class XMLparser{
1699public:
1700
@@ -1074,8 +1113,10 @@
1875 static int parse_radius( const pugi::xml_node &node_data, std::vector<float> &radius );
1876
1877};
+
1878
1880
+
1882class Context{
1883private:
1884
@@ -2836,398 +2877,407 @@
6433 std::vector<uint> filterObjectsByData( const std::vector<uint> &objIDs, const std::string &object_data_label, const std::string &filter_value );
6434
6435};
+
6436
6437}
6438
6439
6440
6441#endif
-
helios::HeliosDataType
HeliosDataType
Data types.
Definition: Context.h:41
-
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition: Context.h:59
-
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition: Context.h:49
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
-
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition: Context.h:43
-
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition: Context.h:63
-
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition: Context.h:53
-
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition: Context.h:61
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition: Context.h:57
-
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition: Context.h:55
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
-
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition: Context.h:31
-
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition: Context.h:33
-
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition: Context.h:37
-
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition: Context.h:35
-
helios::ObjectType
ObjectType
Type of compound object.
Definition: Context.h:128
-
helios::OBJECT_TYPE_BOX
@ OBJECT_TYPE_BOX
Box.
Definition: Context.h:136
-
helios::OBJECT_TYPE_POLYMESH
@ OBJECT_TYPE_POLYMESH
< Triangular Mesh
Definition: Context.h:140
-
helios::OBJECT_TYPE_TUBE
@ OBJECT_TYPE_TUBE
Tube.
Definition: Context.h:134
-
helios::OBJECT_TYPE_CONE
@ OBJECT_TYPE_CONE
< Cone/tapered cylinder
Definition: Context.h:142
-
helios::OBJECT_TYPE_DISK
@ OBJECT_TYPE_DISK
< Disk
Definition: Context.h:138
-
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition: Context.h:130
-
helios::OBJECT_TYPE_SPHERE
@ OBJECT_TYPE_SPHERE
< Sphere
Definition: Context.h:132
-
helios::Box
Box compound object class.
Definition: Context.h:759
-
helios::Box::getVolume
float getVolume() const
Get the volume of the box object.
Definition: Context.cpp:4004
-
helios::Box::setSubdivisionCount
void setSubdivisionCount(const helios::int3 &subdiv)
Set the number of box sub-patch divisions.
Definition: Context.cpp:4000
-
helios::Box::getSubdivisionCount
helios::int3 getSubdivisionCount() const
Get the number of sub-patch divisions of the box object in each Cartesian direction.
Definition: Context.cpp:3996
-
helios::Box::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the box object.
Definition: Context.cpp:3980
+
helios::HeliosDataType
HeliosDataType
Data types.
Definition Context.h:41
+
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition Context.h:59
+
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition Context.h:49
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
+
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition Context.h:43
+
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition Context.h:63
+
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition Context.h:53
+
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition Context.h:61
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition Context.h:57
+
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition Context.h:55
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
+
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition Context.h:31
+
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition Context.h:33
+
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition Context.h:37
+
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition Context.h:35
+
helios::ObjectType
ObjectType
Type of compound object.
Definition Context.h:128
+
helios::OBJECT_TYPE_BOX
@ OBJECT_TYPE_BOX
Box.
Definition Context.h:136
+
helios::OBJECT_TYPE_POLYMESH
@ OBJECT_TYPE_POLYMESH
< Triangular Mesh
Definition Context.h:140
+
helios::OBJECT_TYPE_TUBE
@ OBJECT_TYPE_TUBE
Tube.
Definition Context.h:134
+
helios::OBJECT_TYPE_CONE
@ OBJECT_TYPE_CONE
< Cone/tapered cylinder
Definition Context.h:142
+
helios::OBJECT_TYPE_DISK
@ OBJECT_TYPE_DISK
< Disk
Definition Context.h:138
+
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition Context.h:130
+
helios::OBJECT_TYPE_SPHERE
@ OBJECT_TYPE_SPHERE
< Sphere
Definition Context.h:132
+
helios::Box
Box compound object class.
Definition Context.h:759
+
helios::Box::getVolume
float getVolume() const
Get the volume of the box object.
Definition Context.cpp:4004
+
helios::Box::setSubdivisionCount
void setSubdivisionCount(const helios::int3 &subdiv)
Set the number of box sub-patch divisions.
Definition Context.cpp:4000
+
helios::Box::getSubdivisionCount
helios::int3 getSubdivisionCount() const
Get the number of sub-patch divisions of the box object in each Cartesian direction.
Definition Context.cpp:3996
+
helios::Box::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the box object.
Definition Context.cpp:3980
helios::Box::~Box
~Box() override=default
Box destructor.
-
helios::Box::getSize
vec3 getSize() const
Get the dimensions of the box object in each Cartesian direction.
Definition: Context.cpp:3961
- -
helios::CompoundObject::getObjectDataSize
uint getObjectDataSize(const char *label) const
Get the size/length of object data.
Definition: Context_data.cpp:3567
-
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition: Context.cpp:2377
-
helios::CompoundObject::setPrimitiveUUIDs
void setPrimitiveUUIDs(const std::vector< uint > &UUIDs)
Method to set the UUIDs of object child primitives.
Definition: Context.cpp:2517
-
helios::CompoundObject::getPrimitiveCount
uint getPrimitiveCount() const
Return the number of primitives contained in the object.
Definition: Context.cpp:2251
-
helios::CompoundObject::overrideTextureColor
void overrideTextureColor()
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:2321
-
helios::CompoundObject::getObjectID
uint getObjectID() const
Get the unique identifier for the object.
Definition: Context.cpp:2243
-
helios::CompoundObject::getTextureFile
std::string getTextureFile() const
Method to return the texture map file of an Object.
Definition: Context.cpp:2349
-
helios::CompoundObject::listObjectData
std::vector< std::string > listObjectData() const
Return labels for all object data for this particular object.
Definition: Context_data.cpp:3662
-
helios::CompoundObject::scale
void scale(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2471
-
helios::CompoundObject::deleteChildPrimitive
void deleteChildPrimitive(uint UUID)
Delete a single child member of the object.
Definition: Context.cpp:2521
-
helios::CompoundObject::hasTexture
bool hasTexture() const
Method to check whether this object has texture data.
Definition: Context.cpp:2341
-
helios::CompoundObject::setTransformationMatrix
void setTransformationMatrix(float(&T)[16])
Method to set the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2509
-
helios::CompoundObject::scaleAboutCenter
void scaleAboutCenter(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2475
-
helios::CompoundObject::scaleAboutPoint
void scaleAboutPoint(const helios::vec3 &scale, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2479
-
helios::CompoundObject::arePrimitivesComplete
bool arePrimitivesComplete() const
Method to query whether all object primitives are in tact.
Definition: Context.cpp:2536
-
helios::CompoundObject::getArea
float getArea() const
Calculate the total one-sided surface area of the Compound Object.
Definition: Context.cpp:2285
-
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition: Context.cpp:2353
-
helios::CompoundObject::doesObjectDataExist
bool doesObjectDataExist(const char *label) const
Check if object data 'label' exists.
Definition: Context_data.cpp:3652
-
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2247
-
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition: Context.cpp:2256
-
helios::CompoundObject::getObjectDataType
HeliosDataType getObjectDataType(const char *label) const
Get the Helios data type of object data.
Definition: Context_data.cpp:3557
-
helios::CompoundObject::clearObjectData
void clearObjectData(const char *label)
Clear the object data for this object.
Definition: Context_data.cpp:3605
-
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2503
-
helios::CompoundObject::getObjectData
void getObjectData(const char *label, int &data) const
Get data associated with a object element (integer scalar)
Definition: Context_data.cpp:3249
-
helios::CompoundObject::setColor
void setColor(const helios::RGBcolor &color)
Method to set the diffuse color for all primitives in the Compound Object.
Definition: Context.cpp:2301
-
helios::CompoundObject::setObjectData
void setObjectData(const char *label, const int &data)
Add data value (int) associated with a object element.
Definition: Context_data.cpp:3087
-
helios::CompoundObject::useTextureColor
void useTextureColor()
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition: Context.cpp:2331
-
helios::CompoundObject::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint UUID)
Check whether a primitive is a member of the object based on its UUID.
Definition: Context.cpp:2262
-
helios::CompoundObject::getObjectCenter
helios::vec3 getObjectCenter() const
Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
Definition: Context.cpp:2268
-
helios::Cone
Cone compound object class.
Definition: Context.h:847
-
helios::Cone::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the cone object.
Definition: Context.cpp:4171
-
helios::Cone::getNodeRadius
float getNodeRadius(int node_index) const
Get the radius of a cone object node.
Definition: Context.cpp:4163
-
helios::Cone::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of radial sub-triangle divisions.
Definition: Context.cpp:4175
-
helios::Cone::getNodeCoordinate
helios::vec3 getNodeCoordinate(int node_index) const
Get the Cartesian coordinates of a cone object node.
Definition: Context.cpp:4144
-
helios::Cone::getAxisUnitVector
helios::vec3 getAxisUnitVector() const
Get a unit vector pointing in the direction of the cone central axis.
Definition: Context.cpp:4179
-
helios::Cone::getNodeCoordinates
std::vector< helios::vec3 > getNodeCoordinates() const
Get the Cartesian coordinates of each of the cone object nodes.
Definition: Context.cpp:4130
-
helios::Cone::scaleLength
void scaleLength(float S)
Method to scale the length of the cone.
Definition: Context.cpp:4212
+
helios::Box::Box
Box(uint a_OID, const std::vector< uint > &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3941
+
helios::Box::getSize
vec3 getSize() const
Get the dimensions of the box object in each Cartesian direction.
Definition Context.cpp:3961
+ +
helios::CompoundObject::getObjectDataSize
uint getObjectDataSize(const char *label) const
Get the size/length of object data.
Definition Context_data.cpp:3567
+
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition Context.cpp:2377
+
helios::CompoundObject::setPrimitiveUUIDs
void setPrimitiveUUIDs(const std::vector< uint > &UUIDs)
Method to set the UUIDs of object child primitives.
Definition Context.cpp:2517
+
helios::CompoundObject::getPrimitiveCount
uint getPrimitiveCount() const
Return the number of primitives contained in the object.
Definition Context.cpp:2251
+
helios::CompoundObject::overrideTextureColor
void overrideTextureColor()
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:2321
+
helios::CompoundObject::getObjectID
uint getObjectID() const
Get the unique identifier for the object.
Definition Context.cpp:2243
+
helios::CompoundObject::getTextureFile
std::string getTextureFile() const
Method to return the texture map file of an Object.
Definition Context.cpp:2349
+
helios::CompoundObject::listObjectData
std::vector< std::string > listObjectData() const
Return labels for all object data for this particular object.
Definition Context_data.cpp:3662
+
helios::CompoundObject::scale
void scale(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2471
+
helios::CompoundObject::deleteChildPrimitive
void deleteChildPrimitive(uint UUID)
Delete a single child member of the object.
Definition Context.cpp:2521
+
helios::CompoundObject::hasTexture
bool hasTexture() const
Method to check whether this object has texture data.
Definition Context.cpp:2341
+
helios::CompoundObject::setTransformationMatrix
void setTransformationMatrix(float(&T)[16])
Method to set the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2509
+
helios::CompoundObject::scaleAboutCenter
void scaleAboutCenter(const helios::vec3 &scale)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2475
+
helios::CompoundObject::scaleAboutPoint
void scaleAboutPoint(const helios::vec3 &scale, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2479
+
helios::CompoundObject::arePrimitivesComplete
bool arePrimitivesComplete() const
Method to query whether all object primitives are in tact.
Definition Context.cpp:2536
+
helios::CompoundObject::getArea
float getArea() const
Calculate the total one-sided surface area of the Compound Object.
Definition Context.cpp:2285
+
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition Context.cpp:2353
+
helios::CompoundObject::doesObjectDataExist
bool doesObjectDataExist(const char *label) const
Check if object data 'label' exists.
Definition Context_data.cpp:3652
+
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2247
+
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition Context.cpp:2256
+
helios::CompoundObject::getObjectDataType
HeliosDataType getObjectDataType(const char *label) const
Get the Helios data type of object data.
Definition Context_data.cpp:3557
+
helios::CompoundObject::clearObjectData
void clearObjectData(const char *label)
Clear the object data for this object.
Definition Context_data.cpp:3605
+
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2503
+
helios::CompoundObject::getObjectData
void getObjectData(const char *label, int &data) const
Get data associated with a object element (integer scalar)
Definition Context_data.cpp:3249
+
helios::CompoundObject::setColor
void setColor(const helios::RGBcolor &color)
Method to set the diffuse color for all primitives in the Compound Object.
Definition Context.cpp:2301
+
helios::CompoundObject::setObjectData
void setObjectData(const char *label, const int &data)
Add data value (int) associated with a object element.
Definition Context_data.cpp:3087
+
helios::CompoundObject::useTextureColor
void useTextureColor()
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition Context.cpp:2331
+
helios::CompoundObject::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint UUID)
Check whether a primitive is a member of the object based on its UUID.
Definition Context.cpp:2262
+
helios::CompoundObject::getObjectCenter
helios::vec3 getObjectCenter() const
Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
Definition Context.cpp:2268
+
helios::Cone
Cone compound object class.
Definition Context.h:847
+
helios::Cone::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the cone object.
Definition Context.cpp:4171
+
helios::Cone::Cone
Cone(uint a_OID, const std::vector< uint > &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:4107
+
helios::Cone::getNodeRadius
float getNodeRadius(int node_index) const
Get the radius of a cone object node.
Definition Context.cpp:4163
+
helios::Cone::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of radial sub-triangle divisions.
Definition Context.cpp:4175
+
helios::Cone::getNodeCoordinate
helios::vec3 getNodeCoordinate(int node_index) const
Get the Cartesian coordinates of a cone object node.
Definition Context.cpp:4144
+
helios::Cone::getAxisUnitVector
helios::vec3 getAxisUnitVector() const
Get a unit vector pointing in the direction of the cone central axis.
Definition Context.cpp:4179
+
helios::Cone::getNodeCoordinates
std::vector< helios::vec3 > getNodeCoordinates() const
Get the Cartesian coordinates of each of the cone object nodes.
Definition Context.cpp:4130
+
helios::Cone::scaleLength
void scaleLength(float S)
Method to scale the length of the cone.
Definition Context.cpp:4212
helios::Cone::~Cone
~Cone() override=default
Cone destructor.
-
helios::Cone::scaleGirth
void scaleGirth(float S)
Method to scale the girth of the cone.
Definition: Context.cpp:4261
-
helios::Cone::getLength
float getLength() const
Get the length of the cone along the axial direction.
Definition: Context.cpp:4197
-
helios::Cone::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the cone object nodes.
Definition: Context.cpp:4159
-
helios::Cone::getVolume
float getVolume() const
Get the volume of the cone object.
Definition: Context.cpp:4302
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition: Context_data.cpp:1192
-
helios::Context::getTileObjectTextureUV
std::vector< helios::vec2 > getTileObjectTextureUV(uint ObjID) const
get the texture UV coordinates of a tile object from the context
Definition: Context.cpp:8132
-
helios::Context::setTileObjectSubdivisionCount
void setTileObjectSubdivisionCount(const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
Change the subdivision count of a tile object.
Definition: Context.cpp:2982
-
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition: Context.cpp:7139
-
helios::Context::getPrimitiveTransformationMatrix
void getPrimitiveTransformationMatrix(uint UUID, float(&T)[16]) const
Method to return the Affine transformation matrix of a Primitive.
Definition: Context.cpp:7108
-
helios::Context::scaleTubeLength
void scaleTubeLength(uint ObjID, float scale_factor)
Scale the length of a tube object by an arbitrary factor for all tube nodes.
Definition: Context.cpp:8208
-
helios::Context::isObjectHidden
bool isObjectHidden(uint ObjID) const
Query if an object is hidden.
Definition: Context.cpp:7913
-
helios::Context::listTimeseriesVariables
std::vector< std::string > listTimeseriesVariables() const
List all existing timeseries variables.
Definition: Context.cpp:2036
-
helios::Context::scalePrimitiveData
void scalePrimitiveData(const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
Multiply primitive data values by a constant scaling factor for a subset of primitives.
Definition: Context_data.cpp:1812
-
helios::Context::scaleObjectAboutPoint
void scaleObjectAboutPoint(uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2897
-
helios::Context::getTubeObjectSegmentVolume
float getTubeObjectSegmentVolume(uint ObjID, uint segment_index) const
get the volume of a segment within a Tube object
Definition: Context.cpp:8176
-
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition: Context_fileIO.cpp:3378
-
helios::Context::getPrimitiveColor
helios::RGBcolor getPrimitiveColor(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition: Context.cpp:7127
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
-
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition: Context.cpp:2642
-
helios::Context::randn
float randn()
Draw a random number from a normal distribution with mean = 0, stddev = 1.
Definition: Context.cpp:1204
-
helios::Context::getDiskObjectPointer
Disk * getDiskObjectPointer(uint ObjID) const
Get a pointer to a Disk Compound Object.
Definition: Context.cpp:4022
-
helios::Context::overrideObjectTextureColor
void overrideObjectTextureColor(uint ObjID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7978
-
helios::Context::getUniquePrimitiveParentObjectIDs
std::vector< uint > getUniquePrimitiveParentObjectIDs(const std::vector< uint > &UUIDs) const
Method to return unique parent object IDs for a vector of primitive UUIDs.
Definition: Context.cpp:7022
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::getObjectBoundingBox
void getObjectBoundingBox(uint ObjID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single object.
Definition: Context.cpp:7998
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::loadTabularTimeseriesData
void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
Load tabular weather data from text file into timeseries.
Definition: Context_fileIO.cpp:4552
-
helios::Context::getBoxObjectPointer
Box * getBoxObjectPointer(uint ObjID) const
Get a pointer to a Box Compound Object.
Definition: Context.cpp:3954
-
helios::Context::cleanDeletedUUIDs
void cleanDeletedUUIDs(std::vector< uint > &UUIDs) const
Delete UUIDs from vector if primitives no longer exist (1D vector)
Definition: Context.cpp:1793
-
helios::Context::getConeObjectSubdivisionCount
uint getConeObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Cone object from the context
Definition: Context.cpp:8250
-
helios::Context::getDiskObjectCenter
helios::vec3 getDiskObjectCenter(uint ObjID) const
get the center of a Disk object from the context
Definition: Context.cpp:8238
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::getJulianDate
int getJulianDate() const
Get simulation date by Julian day.
Definition: Context.cpp:1132
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::getBoxObjectSubdivisionCount
helios::int3 getBoxObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Box object from the context
Definition: Context.cpp:8230
-
helios::Context::getTubeObjectSubdivisionCount
uint getTubeObjectSubdivisionCount(uint ObjectID) const
get the subdivision count of a Tube object from the context
Definition: Context.cpp:8156
-
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:2983
-
helios::Context::~Context
~Context()
Context destructor.
Definition: Context.cpp:6970
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition: Context.cpp:2589
-
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition: Context.cpp:4123
-
helios::Context::seedRandomGenerator
void seedRandomGenerator(uint seed)
Set seed for random generator.
Definition: Context.cpp:45
-
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition: Context_data.cpp:2815
-
helios::Context::printPrimitiveInfo
void printPrimitiveInfo(uint UUID) const
Prints primitive properties to console (useful for debugging purposes)
Definition: Context.cpp:7225
-
helios::Context::markGeometryClean
void markGeometryClean()
Mark the Context geometry as "clean", meaning that the geometry has not been modified since last set ...
Definition: Context.cpp:149
-
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition: Context.cpp:2116
-
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition: Context.cpp:2847
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::getPatchCenter
helios::vec3 getPatchCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a patch element.
Definition: Context.cpp:1693
-
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition: Context_data.cpp:2299
-
helios::Context::getTileObjectSize
helios::vec2 getTileObjectSize(uint ObjID) const
get the size of a tile object from the context
Definition: Context.cpp:8120
-
helios::Context::getObjectPrimitiveCount
uint getObjectPrimitiveCount(uint ObjID) const
Method to return the number of primitives contained in the object.
Definition: Context.cpp:7924
-
helios::Context::getLoadedXMLFiles
std::vector< std::string > getLoadedXMLFiles()
Get names of XML files that are currently loaded.
Definition: Context_fileIO.cpp:2399
-
helios::Context::getPrimitiveDataSize
uint getPrimitiveDataSize(uint UUID, const char *label) const
Get the size/length of primitive data.
Definition: Context_data.cpp:1162
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::calculatePrimitiveDataSum
void calculatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
Calculate sum of primitive data values (float) for a subset of primitives.
Definition: Context_data.cpp:1562
-
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition: Context.cpp:7135
-
helios::Context::getBoxObjectSize
helios::vec3 getBoxObjectSize(uint ObjID) const
get the size of a Box object from the context
Definition: Context.cpp:8226
-
helios::Context::getSphereObjectCenter
helios::vec3 getSphereObjectCenter(uint ObjID) const
get the center of a Sphere object from the context
Definition: Context.cpp:8140
-
helios::Context::incrementPrimitiveData
void incrementPrimitiveData(const std::vector< uint > &UUIDs, const char *label, int increment)
Increase value of primitive data (int) by some value.
Definition: Context_data.cpp:1870
-
helios::Context::getObjectCenter
helios::vec3 getObjectCenter(uint ObjID) const
Method to return the Cartesian (x,y,z) point of the center of a bounding box for the object.
Definition: Context.cpp:7928
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getObjectCount
uint getObjectCount() const
Get the total number of objects that have been created in the Context.
Definition: Context.cpp:2581
-
helios::Context::getConeObjectNode
helios::vec3 getConeObjectNode(uint ObjID, int number) const
get a node of a Cone object from the context
Definition: Context.cpp:8262
-
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition: Context.cpp:8172
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::cropDomainZ
void cropDomainZ(const vec2 &zbounds)
Crop the domain in the z-direction such that all primitives lie within some specified z interval.
Definition: Context.cpp:2190
-
helios::Context::getPolymeshObjectPointer
Polymesh * getPolymeshObjectPointer(uint ObjID) const
Get a pointer to a Polygon Mesh Compound Object.
Definition: Context.cpp:4081
-
helios::Context::cropDomainX
void cropDomainX(const vec2 &xbounds)
Crop the domain in the x-direction such that all primitives lie within some specified x interval.
Definition: Context.cpp:2144
-
helios::Context::getSphereObjectRadius
helios::vec3 getSphereObjectRadius(uint ObjID) const
get the radius of a Sphere object from the context
Definition: Context.cpp:8144
-
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition: Context.cpp:1059
-
helios::Context::renamePrimitiveData
void renamePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Rename primitive data for a primitive.
Definition: Context_data.cpp:1216
-
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:6988
-
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition: Context.cpp:7179
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::usePrimitiveTextureColor
void usePrimitiveTextureColor(uint UUID)
Use the texture map to color the primitive rather than the constant RGB color. This is function rever...
Definition: Context.cpp:7207
-
helios::Context::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint ObjID, uint UUID)
Method to check if an Object contains a Primitive.
Definition: Context.cpp:7974
-
helios::Context::duplicateObjectData
void duplicateObjectData(uint objID, const char *old_label, const char *new_label)
Duplicate/copy existing object data.
Definition: Context_data.cpp:3014
-
helios::Context::getMonthString
const char * getMonthString() const
Get a string corresponding to the month of the simulation date.
Definition: Context.cpp:1103
-
helios::Context::filterObjectsByData
std::vector< uint > filterObjectsByData(const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
Get a vector of object IDs that meet filtering criteria based on object data.
Definition: Context.cpp:2750
-
helios::Context::setObjectColor
void setObjectColor(uint ObjID, const helios::RGBcolor &color)
Method to set the diffuse color of an Object.
Definition: Context.cpp:7954
-
helios::Context::setTriangleVertices
void setTriangleVertices(uint UUID, const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
//! Manually set the Triangle vertices
Definition: Context.cpp:1722
-
helios::Context::appendTubeSegment
void appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
Append a tube segment to an existing tube object.
Definition: Context.cpp:8180
-
helios::Context::isGeometryDirty
bool isGeometryDirty() const
Query whether the Context geometry is "dirty", meaning has the geometry been modified since last set ...
Definition: Context.cpp:157
-
helios::Context::getTileObjectNormal
helios::vec3 getTileObjectNormal(uint ObjID) const
get the normal of a tile object from the context
Definition: Context.cpp:8128
-
helios::Context::Context
Context()
Context default constructor.
Definition: Context.cpp:20
-
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition: Context_data.cpp:4533
-
helios::Context::aggregatePrimitiveDataProduct
void aggregatePrimitiveDataProduct(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Multiply primitive data values for each primitive together and store result in new primitive data.
Definition: Context_data.cpp:2090
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition: Context.cpp:1741
-
helios::Context::getTubeObjectNodeRadii
std::vector< float > getTubeObjectNodeRadii(uint ObjID) const
get the node radii of a Tube object from the context
Definition: Context.cpp:8164
-
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition: Context_data.cpp:2467
-
helios::Context::clearObjectData
void clearObjectData(uint objID, const char *label)
Clear primitive data for a single primitive based on its objID.
Definition: Context_data.cpp:3067
-
helios::Context::getPrimitiveSolidFraction
float getPrimitiveSolidFraction(uint UUID) const
Get fraction of primitive surface area that is non-transparent.
Definition: Context.cpp:7221
-
helios::Context::translateObject
void translateObject(uint ObjID, const vec3 &shift)
Translate a single compound object.
Definition: Context.cpp:2837
-
helios::Context::scaleObjectAboutCenter
void scaleObjectAboutCenter(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2887
-
helios::Context::cropDomainY
void cropDomainY(const vec2 &ybounds)
Crop the domain in the y-direction such that all primitives lie within some specified y interval.
Definition: Context.cpp:2167
-
helios::Context::getObjectType
helios::ObjectType getObjectType(uint ObjID) const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2940
-
helios::Context::colorPrimitiveByDataPseudocolor
void colorPrimitiveByDataPseudocolor(const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors)
Overwrite primitive color based on a pseudocolor mapping of primitive data values.
Definition: Context.cpp:6666
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getTubeObjectNodeColors
std::vector< RGBcolor > getTubeObjectNodeColors(uint ObjID) const
get the node colors of a Tube object from the context
Definition: Context.cpp:8168
-
helios::Context::listPrimitiveData
std::vector< std::string > listPrimitiveData(uint UUID) const
Return labels for all primitive data for this particular primitive.
Definition: Context_data.cpp:1268
-
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition: Context.cpp:2907
-
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition: Context.cpp:1578
-
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition: Context.cpp:7167
-
helios::Context::writeOBJ
void writeOBJ(const std::string &filename) const
Write geometry in the Context to a Wavefront file (.obj)
Definition: Context_fileIO.cpp:4131
-
helios::Context::renameGlobalData
void renameGlobalData(const char *old_label, const char *new_label)
Rename global data.
Definition: Context_data.cpp:4051
-
helios::Context::getTriangleVertex
helios::vec3 getTriangleVertex(uint UUID, uint number) const
Get a single vertex of a Triangle based on an index.
Definition: Context.cpp:1711
-
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition: Context.cpp:1166
-
helios::Context::getPrimitiveColorRGB
helios::RGBcolor getPrimitiveColorRGB(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition: Context.cpp:7131
+
helios::Cone::scaleGirth
void scaleGirth(float S)
Method to scale the girth of the cone.
Definition Context.cpp:4261
+
helios::Cone::getLength
float getLength() const
Get the length of the cone along the axial direction.
Definition Context.cpp:4197
+
helios::Cone::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the cone object nodes.
Definition Context.cpp:4159
+
helios::Cone::getVolume
float getVolume() const
Get the volume of the cone object.
Definition Context.cpp:4302
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition Context_data.cpp:1192
+
helios::Context::getTileObjectTextureUV
std::vector< helios::vec2 > getTileObjectTextureUV(uint ObjID) const
get the texture UV coordinates of a tile object from the context
Definition Context.cpp:8132
+
helios::Context::setTileObjectSubdivisionCount
void setTileObjectSubdivisionCount(const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
Change the subdivision count of a tile object.
Definition Context.cpp:2982
+
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition Context.cpp:7139
+
helios::Context::getPrimitiveTransformationMatrix
void getPrimitiveTransformationMatrix(uint UUID, float(&T)[16]) const
Method to return the Affine transformation matrix of a Primitive.
Definition Context.cpp:7108
+
helios::Context::scaleTubeLength
void scaleTubeLength(uint ObjID, float scale_factor)
Scale the length of a tube object by an arbitrary factor for all tube nodes.
Definition Context.cpp:8208
+
helios::Context::isObjectHidden
bool isObjectHidden(uint ObjID) const
Query if an object is hidden.
Definition Context.cpp:7913
+
helios::Context::listTimeseriesVariables
std::vector< std::string > listTimeseriesVariables() const
List all existing timeseries variables.
Definition Context.cpp:2036
+
helios::Context::scalePrimitiveData
void scalePrimitiveData(const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
Multiply primitive data values by a constant scaling factor for a subset of primitives.
Definition Context_data.cpp:1812
+
helios::Context::scaleObjectAboutPoint
void scaleObjectAboutPoint(uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2897
+
helios::Context::getTubeObjectSegmentVolume
float getTubeObjectSegmentVolume(uint ObjID, uint segment_index) const
get the volume of a segment within a Tube object
Definition Context.cpp:8176
+
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition Context_fileIO.cpp:3378
+
helios::Context::getPrimitiveColor
helios::RGBcolor getPrimitiveColor(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition Context.cpp:7127
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217
+
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition Context.cpp:2642
+
helios::Context::randn
float randn()
Draw a random number from a normal distribution with mean = 0, stddev = 1.
Definition Context.cpp:1204
+
helios::Context::getDiskObjectPointer
Disk * getDiskObjectPointer(uint ObjID) const
Get a pointer to a Disk Compound Object.
Definition Context.cpp:4022
+
helios::Context::overrideObjectTextureColor
void overrideObjectTextureColor(uint ObjID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7978
+
helios::Context::getUniquePrimitiveParentObjectIDs
std::vector< uint > getUniquePrimitiveParentObjectIDs(const std::vector< uint > &UUIDs) const
Method to return unique parent object IDs for a vector of primitive UUIDs.
Definition Context.cpp:7022
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::getObjectBoundingBox
void getObjectBoundingBox(uint ObjID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single object.
Definition Context.cpp:7998
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::loadTabularTimeseriesData
void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
Load tabular weather data from text file into timeseries.
Definition Context_fileIO.cpp:4552
+
helios::Context::getBoxObjectPointer
Box * getBoxObjectPointer(uint ObjID) const
Get a pointer to a Box Compound Object.
Definition Context.cpp:3954
+
helios::Context::cleanDeletedUUIDs
void cleanDeletedUUIDs(std::vector< uint > &UUIDs) const
Delete UUIDs from vector if primitives no longer exist (1D vector)
Definition Context.cpp:1793
+
helios::Context::getConeObjectSubdivisionCount
uint getConeObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Cone object from the context
Definition Context.cpp:8250
+
helios::Context::getDiskObjectCenter
helios::vec3 getDiskObjectCenter(uint ObjID) const
get the center of a Disk object from the context
Definition Context.cpp:8238
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::getJulianDate
int getJulianDate() const
Get simulation date by Julian day.
Definition Context.cpp:1132
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::getBoxObjectSubdivisionCount
helios::int3 getBoxObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Box object from the context
Definition Context.cpp:8230
+
helios::Context::getTubeObjectSubdivisionCount
uint getTubeObjectSubdivisionCount(uint ObjectID) const
get the subdivision count of a Tube object from the context
Definition Context.cpp:8156
+
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:2983
+
helios::Context::~Context
~Context()
Context destructor.
Definition Context.cpp:6970
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition Context.cpp:2589
+
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition Context.cpp:4123
+
helios::Context::seedRandomGenerator
void seedRandomGenerator(uint seed)
Set seed for random generator.
Definition Context.cpp:45
+
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition Context_data.cpp:2815
+
helios::Context::printPrimitiveInfo
void printPrimitiveInfo(uint UUID) const
Prints primitive properties to console (useful for debugging purposes)
Definition Context.cpp:7225
+
helios::Context::markGeometryClean
void markGeometryClean()
Mark the Context geometry as "clean", meaning that the geometry has not been modified since last set ...
Definition Context.cpp:149
+
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition Context.cpp:2116
+
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition Context.cpp:2847
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::getPatchCenter
helios::vec3 getPatchCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a patch element.
Definition Context.cpp:1693
+
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition Context_data.cpp:2299
+
helios::Context::getTileObjectSize
helios::vec2 getTileObjectSize(uint ObjID) const
get the size of a tile object from the context
Definition Context.cpp:8120
+
helios::Context::getObjectPrimitiveCount
uint getObjectPrimitiveCount(uint ObjID) const
Method to return the number of primitives contained in the object.
Definition Context.cpp:7924
+
helios::Context::getLoadedXMLFiles
std::vector< std::string > getLoadedXMLFiles()
Get names of XML files that are currently loaded.
Definition Context_fileIO.cpp:2399
+
helios::Context::getPrimitiveDataSize
uint getPrimitiveDataSize(uint UUID, const char *label) const
Get the size/length of primitive data.
Definition Context_data.cpp:1162
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::calculatePrimitiveDataSum
void calculatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
Calculate sum of primitive data values (float) for a subset of primitives.
Definition Context_data.cpp:1562
+
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition Context.cpp:7135
+
helios::Context::getBoxObjectSize
helios::vec3 getBoxObjectSize(uint ObjID) const
get the size of a Box object from the context
Definition Context.cpp:8226
+
helios::Context::getSphereObjectCenter
helios::vec3 getSphereObjectCenter(uint ObjID) const
get the center of a Sphere object from the context
Definition Context.cpp:8140
+
helios::Context::incrementPrimitiveData
void incrementPrimitiveData(const std::vector< uint > &UUIDs, const char *label, int increment)
Increase value of primitive data (int) by some value.
Definition Context_data.cpp:1870
+
helios::Context::getObjectCenter
helios::vec3 getObjectCenter(uint ObjID) const
Method to return the Cartesian (x,y,z) point of the center of a bounding box for the object.
Definition Context.cpp:7928
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getObjectCount
uint getObjectCount() const
Get the total number of objects that have been created in the Context.
Definition Context.cpp:2581
+
helios::Context::getConeObjectNode
helios::vec3 getConeObjectNode(uint ObjID, int number) const
get a node of a Cone object from the context
Definition Context.cpp:8262
+
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition Context.cpp:8172
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::cropDomainZ
void cropDomainZ(const vec2 &zbounds)
Crop the domain in the z-direction such that all primitives lie within some specified z interval.
Definition Context.cpp:2190
+
helios::Context::getPolymeshObjectPointer
Polymesh * getPolymeshObjectPointer(uint ObjID) const
Get a pointer to a Polygon Mesh Compound Object.
Definition Context.cpp:4081
+
helios::Context::cropDomainX
void cropDomainX(const vec2 &xbounds)
Crop the domain in the x-direction such that all primitives lie within some specified x interval.
Definition Context.cpp:2144
+
helios::Context::getSphereObjectRadius
helios::vec3 getSphereObjectRadius(uint ObjID) const
get the radius of a Sphere object from the context
Definition Context.cpp:8144
+
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition Context.cpp:1059
+
helios::Context::renamePrimitiveData
void renamePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Rename primitive data for a primitive.
Definition Context_data.cpp:1216
+
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:6988
+
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition Context.cpp:7179
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::usePrimitiveTextureColor
void usePrimitiveTextureColor(uint UUID)
Use the texture map to color the primitive rather than the constant RGB color. This is function rever...
Definition Context.cpp:7207
+
helios::Context::doesObjectContainPrimitive
bool doesObjectContainPrimitive(uint ObjID, uint UUID)
Method to check if an Object contains a Primitive.
Definition Context.cpp:7974
+
helios::Context::duplicateObjectData
void duplicateObjectData(uint objID, const char *old_label, const char *new_label)
Duplicate/copy existing object data.
Definition Context_data.cpp:3014
+
helios::Context::getMonthString
const char * getMonthString() const
Get a string corresponding to the month of the simulation date.
Definition Context.cpp:1103
+
helios::Context::filterObjectsByData
std::vector< uint > filterObjectsByData(const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
Get a vector of object IDs that meet filtering criteria based on object data.
Definition Context.cpp:2750
+
helios::Context::setObjectColor
void setObjectColor(uint ObjID, const helios::RGBcolor &color)
Method to set the diffuse color of an Object.
Definition Context.cpp:7954
+
helios::Context::setTriangleVertices
void setTriangleVertices(uint UUID, const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
//! Manually set the Triangle vertices
Definition Context.cpp:1722
+
helios::Context::appendTubeSegment
void appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
Append a tube segment to an existing tube object.
Definition Context.cpp:8180
+
helios::Context::isGeometryDirty
bool isGeometryDirty() const
Query whether the Context geometry is "dirty", meaning has the geometry been modified since last set ...
Definition Context.cpp:157
+
helios::Context::getTileObjectNormal
helios::vec3 getTileObjectNormal(uint ObjID) const
get the normal of a tile object from the context
Definition Context.cpp:8128
+
helios::Context::Context
Context()
Context default constructor.
Definition Context.cpp:20
+
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition Context_data.cpp:4533
+
helios::Context::aggregatePrimitiveDataProduct
void aggregatePrimitiveDataProduct(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Multiply primitive data values for each primitive together and store result in new primitive data.
Definition Context_data.cpp:2090
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition Context.cpp:1741
+
helios::Context::getTubeObjectNodeRadii
std::vector< float > getTubeObjectNodeRadii(uint ObjID) const
get the node radii of a Tube object from the context
Definition Context.cpp:8164
+
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition Context_data.cpp:2467
+
helios::Context::clearObjectData
void clearObjectData(uint objID, const char *label)
Clear primitive data for a single primitive based on its objID.
Definition Context_data.cpp:3067
+
helios::Context::getPrimitiveSolidFraction
float getPrimitiveSolidFraction(uint UUID) const
Get fraction of primitive surface area that is non-transparent.
Definition Context.cpp:7221
+
helios::Context::translateObject
void translateObject(uint ObjID, const vec3 &shift)
Translate a single compound object.
Definition Context.cpp:2837
+
helios::Context::scaleObjectAboutCenter
void scaleObjectAboutCenter(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2887
+
helios::Context::cropDomainY
void cropDomainY(const vec2 &ybounds)
Crop the domain in the y-direction such that all primitives lie within some specified y interval.
Definition Context.cpp:2167
+
helios::Context::getObjectType
helios::ObjectType getObjectType(uint ObjID) const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2940
+
helios::Context::colorPrimitiveByDataPseudocolor
void colorPrimitiveByDataPseudocolor(const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors)
Overwrite primitive color based on a pseudocolor mapping of primitive data values.
Definition Context.cpp:6666
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getTubeObjectNodeColors
std::vector< RGBcolor > getTubeObjectNodeColors(uint ObjID) const
get the node colors of a Tube object from the context
Definition Context.cpp:8168
+
helios::Context::listPrimitiveData
std::vector< std::string > listPrimitiveData(uint UUID) const
Return labels for all primitive data for this particular primitive.
Definition Context_data.cpp:1268
+
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition Context.cpp:2907
+
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition Context.cpp:1578
+
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition Context.cpp:7167
+
helios::Context::writeOBJ
void writeOBJ(const std::string &filename) const
Write geometry in the Context to a Wavefront file (.obj)
Definition Context_fileIO.cpp:4131
+
helios::Context::renameGlobalData
void renameGlobalData(const char *old_label, const char *new_label)
Rename global data.
Definition Context_data.cpp:4051
+
helios::Context::getTriangleVertex
helios::vec3 getTriangleVertex(uint UUID, uint number) const
Get a single vertex of a Triangle based on an index.
Definition Context.cpp:1711
+
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition Context.cpp:1166
+
helios::Context::getPrimitiveColorRGB
helios::RGBcolor getPrimitiveColorRGB(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition Context.cpp:7131
helios::Context::Context
Context(const Context &)=delete
Deleted copy constructor to prevent copying of Context.
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helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition: Context_fileIO.cpp:3742
-
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Context.cpp:2046
-
helios::Context::duplicatePrimitiveData
void duplicatePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Duplicate/copy primitive data.
Definition: Context_data.cpp:1229
-
helios::Context::getDiskObjectSubdivisionCount
uint getDiskObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Disk object from the context
Definition: Context.cpp:8246
-
helios::Context::setPrimitiveTextureFile
void setPrimitiveTextureFile(uint UUID, const std::string &texturefile)
Set the texture map file for a primitive.
Definition: Context.cpp:7163
-
helios::Context::getConeObjectNodes
std::vector< helios::vec3 > getConeObjectNodes(uint ObjID) const
get the nodes of a Cone object from the context
Definition: Context.cpp:8254
-
helios::Context::hidePrimitive
void hidePrimitive(const std::vector< uint > &UUIDs)
Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()
Definition: Context.cpp:1777
-
helios::Context::getSphereObjectPointer
Sphere * getSphereObjectPointer(uint ObjID) const
Get a pointer to a Sphere Compound Object.
Definition: Context.cpp:3410
-
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7197
-
helios::Context::calculatePrimitiveDataMean
void calculatePrimitiveDataMean(const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
Calculate mean of primitive data values (float) for a subset of primitives.
Definition: Context_data.cpp:1304
-
helios::Context::getTileObjectSubdivisionCount
helios::int2 getTileObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a tile object from the context
Definition: Context.cpp:8124
-
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition: Context_data.cpp:4502
-
helios::Context::isPrimitiveHidden
bool isPrimitiveHidden(uint UUID) const
Query whether a primitive is hidden.
Definition: Context.cpp:1786
-
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition: Context.cpp:1099
-
helios::Context::printObjectInfo
void printObjectInfo(uint ObjID) const
Prints object properties to console (useful for debugging purposes)
Definition: Context.cpp:7499
-
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition: Context.cpp:49
-
helios::Context::getGlobalDataSize
size_t getGlobalDataSize(const char *label) const
Get the size/length of global data.
Definition: Context_data.cpp:4512
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::hideObject
void hideObject(const std::vector< uint > &ObjIDs)
Hide compound objects in the Context such that their object IDs are not returned in Context::getAllOb...
Definition: Context.cpp:7901
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition: Context.cpp:7187
-
helios::Context::getTileObjectAreaRatio
float getTileObjectAreaRatio(uint ObjectID) const
Get the area ratio of a tile object (total object area / sub-patch area)
Definition: Context.cpp:2944
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::clearGlobalData
void clearGlobalData(const char *label)
Delete/clear global data.
Definition: Context_data.cpp:4120
-
helios::Context::renameObjectData
void renameObjectData(uint objID, const char *old_label, const char *new_label)
Rename existing object data.
Definition: Context_data.cpp:3054
-
helios::Context::getTubeObjectNodes
std::vector< helios::vec3 > getTubeObjectNodes(uint ObjID) const
get the nodes of a Tube object from the context
Definition: Context.cpp:8160
-
helios::Context::writePLY
void writePLY(const char *filename) const
Write geometry in the Context to a Stanford polygon file (.ply)
Definition: Context_fileIO.cpp:3678
-
helios::Context::getTileObjectCenter
helios::vec3 getTileObjectCenter(uint ObjID) const
Get the Cartesian (x,y,z) center position of a tile object.
Definition: Context.cpp:8116
-
helios::Context::scaleTubeGirth
void scaleTubeGirth(uint ObjID, float scale_factor)
Scale the girth for all nodes of a tube object.
Definition: Context.cpp:8194
-
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition: Context_data.cpp:3844
-
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition: Context.cpp:7217
-
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition: Context.cpp:2609
-
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition: Context.cpp:7920
-
helios::Context::getObjectTextureFile
std::string getObjectTextureFile(uint ObjID) const
Method to return the texture map file of an Object.
Definition: Context.cpp:7932
-
helios::Context::aggregatePrimitiveDataSum
void aggregatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Sum multiple primitive data values for each primitive together and store result in new primitive data...
Definition: Context_data.cpp:1958
-
helios::Context::getPolymeshObjectVolume
float getPolymeshObjectVolume(uint ObjID) const
Get the volume of a Polygon Mesh object from the context.
Definition: Context.cpp:8282
-
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition: Context.cpp:1491
-
helios::Context::getTubeObjectPointer
Tube * getTubeObjectPointer(uint ObjID) const
Get a pointer to a Tube Compound Object.
Definition: Context.cpp:3486
-
helios::Context::getPatchSize
helios::vec2 getPatchSize(uint UUID) const
Get the size of a patch element.
Definition: Context.cpp:1684
-
helios::Context::writePrimitiveData
void writePrimitiveData(std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
Write primitive data to an ASCII text file for all primitives in the Context.
Definition: Context_fileIO.cpp:4473
-
helios::Context::getTileObjectVertices
std::vector< helios::vec3 > getTileObjectVertices(uint ObjID) const
get the vertices of a tile object from the context
Definition: Context.cpp:8136
-
helios::Context::markGeometryDirty
void markGeometryDirty()
Mark the Context geometry as "dirty", meaning that the geometry has been modified since last set as c...
Definition: Context.cpp:153
-
helios::Context::getPrimitiveBoundingBox
void getPrimitiveBoundingBox(uint UUID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single primitive.
Definition: Context.cpp:7057
-
helios::Context::writeXML
void writeXML(const char *filename, bool quiet=false) const
Write Context geometry and data to XML file for all UUIDs in the context.
Definition: Context_fileIO.cpp:2658
-
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition: Context.cpp:7104
-
helios::Context::getObjectDataSize
uint getObjectDataSize(uint objID, const char *label) const
Get the size/length of primitive data.
Definition: Context_data.cpp:2976
-
helios::Context::calculatePrimitiveDataAreaWeightedSum
void calculatePrimitiveDataAreaWeightedSum(const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
Calculate sum of primitive data values (float) for a subset of primitives, where each value in the su...
Definition: Context_data.cpp:1667
-
helios::Context::incrementGlobalData
void incrementGlobalData(const char *label, int increment)
Increase value of global data (int) by some value.
Definition: Context_data.cpp:4543
-
helios::Context::clearPrimitiveData
void clearPrimitiveData(uint UUID, const char *label)
Clear primitive data for a single primitive based on its UUID.
Definition: Context_data.cpp:1176
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::getConeObjectAxisUnitVector
helios::vec3 getConeObjectAxisUnitVector(uint ObjID) const
get the axis unit vector of a Cone object from the context
Definition: Context.cpp:8270
-
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition: Context.cpp:1750
-
helios::Context::calculatePrimitiveDataAreaWeightedMean
void calculatePrimitiveDataAreaWeightedMean(const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
Calculate mean of primitive data values (float) for a subset of primitives, where each value in the m...
Definition: Context_data.cpp:1413
-
helios::Context::getDiskObjectSize
helios::vec2 getDiskObjectSize(uint ObjID) const
get the size of a Disk object from the context
Definition: Context.cpp:8242
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::areObjectPrimitivesComplete
bool areObjectPrimitivesComplete(uint objID) const
Method to query whether all object primitives are in tact.
Definition: Context.cpp:2540
-
helios::Context::getConeObjectLength
float getConeObjectLength(uint ObjID) const
get the length of a Cone object from the context
Definition: Context.cpp:8274
-
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition: Context.cpp:3312
-
helios::Context::scalePrimitiveAboutPoint
void scalePrimitiveAboutPoint(uint UUID, const helios::vec3 &S, const helios::vec3 point)
Scale a primitive using its UUID about an arbitrary point in space.
Definition: Context.cpp:1512
-
helios::Context::useObjectTextureColor
void useObjectTextureColor(uint ObjID)
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition: Context.cpp:7988
-
helios::Context::getSphereObjectSubdivisionCount
uint getSphereObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Sphere object from the context
Definition: Context.cpp:8148
-
helios::Context::scanXMLForTag
static bool scanXMLForTag(const std::string &filename, const std::string &tag, const std::string &label="")
Scan a Helios XML file to check if a tag exists.
Definition: Context_fileIO.cpp:2403
-
helios::Context::setLocation
void setLocation(const helios::Location &location)
Set the location of the simulation (latitude, longitude, and UTC offset)
Definition: Context.cpp:1170
-
helios::Context::listObjectData
std::vector< std::string > listObjectData(uint ObjID) const
Return labels for all object data for this particular object.
Definition: Context_data.cpp:3083
-
helios::Context::getConeObjectNodeRadii
std::vector< float > getConeObjectNodeRadii(uint ObjID) const
get the node radii of a Cone object from the context
Definition: Context.cpp:8258
-
helios::Context::listGlobalData
std::vector< std::string > listGlobalData() const
List the labels for all global data in the Context.
Definition: Context_data.cpp:4522
-
helios::Context::writeXML_byobject
void writeXML_byobject(const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
Write Context geometry and data to XML file for a subset of compound object IDs in the context.
Definition: Context_fileIO.cpp:2662
-
helios::Context::getBoxObjectVolume
float getBoxObjectVolume(uint ObjID) const
get the volume of a Box object from the context
Definition: Context.cpp:8234
-
helios::Context::copyObjectData
void copyObjectData(uint source_objID, uint destination_objID)
copy all object data from one compound object to another
Definition: Context_data.cpp:2990
-
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition: Context.cpp:1136
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::Context::duplicateGlobalData
void duplicateGlobalData(const char *old_label, const char *new_label)
Make a copy of global data.
Definition: Context_data.cpp:4062
-
helios::Context::getSphereObjectVolume
float getSphereObjectVolume(uint ObjID) const
get the volume of a Sphere object from the context
Definition: Context.cpp:8152
-
helios::Context::setObjectTransformationMatrix
void setObjectTransformationMatrix(uint ObjID, float(&T)[16])
Method to set the Affine transformation matrix of an Object.
Definition: Context.cpp:7940
-
helios::Context::cropDomain
void cropDomain(std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
Crop specified UUIDs such that they lie within some specified axis-aligned box.
Definition: Context.cpp:2213
+
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition Context_fileIO.cpp:3742
+
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Context.cpp:2046
+
helios::Context::duplicatePrimitiveData
void duplicatePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Duplicate/copy primitive data.
Definition Context_data.cpp:1229
+
helios::Context::getDiskObjectSubdivisionCount
uint getDiskObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Disk object from the context
Definition Context.cpp:8246
+
helios::Context::setPrimitiveTextureFile
void setPrimitiveTextureFile(uint UUID, const std::string &texturefile)
Set the texture map file for a primitive.
Definition Context.cpp:7163
+
helios::Context::getConeObjectNodes
std::vector< helios::vec3 > getConeObjectNodes(uint ObjID) const
get the nodes of a Cone object from the context
Definition Context.cpp:8254
+
helios::Context::hidePrimitive
void hidePrimitive(const std::vector< uint > &UUIDs)
Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()
Definition Context.cpp:1777
+
helios::Context::getSphereObjectPointer
Sphere * getSphereObjectPointer(uint ObjID) const
Get a pointer to a Sphere Compound Object.
Definition Context.cpp:3410
+
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7197
+
helios::Context::calculatePrimitiveDataMean
void calculatePrimitiveDataMean(const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
Calculate mean of primitive data values (float) for a subset of primitives.
Definition Context_data.cpp:1304
+
helios::Context::getTileObjectSubdivisionCount
helios::int2 getTileObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a tile object from the context
Definition Context.cpp:8124
+
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition Context_data.cpp:4502
+
helios::Context::isPrimitiveHidden
bool isPrimitiveHidden(uint UUID) const
Query whether a primitive is hidden.
Definition Context.cpp:1786
+
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition Context.cpp:1099
+
helios::Context::printObjectInfo
void printObjectInfo(uint ObjID) const
Prints object properties to console (useful for debugging purposes)
Definition Context.cpp:7499
+
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition Context.cpp:49
+
helios::Context::getGlobalDataSize
size_t getGlobalDataSize(const char *label) const
Get the size/length of global data.
Definition Context_data.cpp:4512
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::hideObject
void hideObject(const std::vector< uint > &ObjIDs)
Hide compound objects in the Context such that their object IDs are not returned in Context::getAllOb...
Definition Context.cpp:7901
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition Context.cpp:7187
+
helios::Context::getTileObjectAreaRatio
float getTileObjectAreaRatio(uint ObjectID) const
Get the area ratio of a tile object (total object area / sub-patch area)
Definition Context.cpp:2944
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::clearGlobalData
void clearGlobalData(const char *label)
Delete/clear global data.
Definition Context_data.cpp:4120
+
helios::Context::renameObjectData
void renameObjectData(uint objID, const char *old_label, const char *new_label)
Rename existing object data.
Definition Context_data.cpp:3054
+
helios::Context::getTubeObjectNodes
std::vector< helios::vec3 > getTubeObjectNodes(uint ObjID) const
get the nodes of a Tube object from the context
Definition Context.cpp:8160
+
helios::Context::writePLY
void writePLY(const char *filename) const
Write geometry in the Context to a Stanford polygon file (.ply)
Definition Context_fileIO.cpp:3678
+
helios::Context::getTileObjectCenter
helios::vec3 getTileObjectCenter(uint ObjID) const
Get the Cartesian (x,y,z) center position of a tile object.
Definition Context.cpp:8116
+
helios::Context::scaleTubeGirth
void scaleTubeGirth(uint ObjID, float scale_factor)
Scale the girth for all nodes of a tube object.
Definition Context.cpp:8194
+
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition Context_data.cpp:3844
+
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition Context.cpp:7217
+
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition Context.cpp:2609
+
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition Context.cpp:7920
+
helios::Context::getObjectTextureFile
std::string getObjectTextureFile(uint ObjID) const
Method to return the texture map file of an Object.
Definition Context.cpp:7932
+
helios::Context::aggregatePrimitiveDataSum
void aggregatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Sum multiple primitive data values for each primitive together and store result in new primitive data...
Definition Context_data.cpp:1958
+
helios::Context::getPolymeshObjectVolume
float getPolymeshObjectVolume(uint ObjID) const
Get the volume of a Polygon Mesh object from the context.
Definition Context.cpp:8282
+
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition Context.cpp:1491
+
helios::Context::getTubeObjectPointer
Tube * getTubeObjectPointer(uint ObjID) const
Get a pointer to a Tube Compound Object.
Definition Context.cpp:3486
+
helios::Context::getPatchSize
helios::vec2 getPatchSize(uint UUID) const
Get the size of a patch element.
Definition Context.cpp:1684
+
helios::Context::writePrimitiveData
void writePrimitiveData(std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
Write primitive data to an ASCII text file for all primitives in the Context.
Definition Context_fileIO.cpp:4473
+
helios::Context::getTileObjectVertices
std::vector< helios::vec3 > getTileObjectVertices(uint ObjID) const
get the vertices of a tile object from the context
Definition Context.cpp:8136
+
helios::Context::markGeometryDirty
void markGeometryDirty()
Mark the Context geometry as "dirty", meaning that the geometry has been modified since last set as c...
Definition Context.cpp:153
+
helios::Context::getPrimitiveBoundingBox
void getPrimitiveBoundingBox(uint UUID, vec3 &min_corner, vec3 &max_corner) const
Get the axis-aligned bounding box for a single primitive.
Definition Context.cpp:7057
+
helios::Context::writeXML
void writeXML(const char *filename, bool quiet=false) const
Write Context geometry and data to XML file for all UUIDs in the context.
Definition Context_fileIO.cpp:2658
+
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition Context.cpp:7104
+
helios::Context::getObjectDataSize
uint getObjectDataSize(uint objID, const char *label) const
Get the size/length of primitive data.
Definition Context_data.cpp:2976
+
helios::Context::calculatePrimitiveDataAreaWeightedSum
void calculatePrimitiveDataAreaWeightedSum(const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
Calculate sum of primitive data values (float) for a subset of primitives, where each value in the su...
Definition Context_data.cpp:1667
+
helios::Context::incrementGlobalData
void incrementGlobalData(const char *label, int increment)
Increase value of global data (int) by some value.
Definition Context_data.cpp:4543
+
helios::Context::clearPrimitiveData
void clearPrimitiveData(uint UUID, const char *label)
Clear primitive data for a single primitive based on its UUID.
Definition Context_data.cpp:1176
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::getConeObjectAxisUnitVector
helios::vec3 getConeObjectAxisUnitVector(uint ObjID) const
get the axis unit vector of a Cone object from the context
Definition Context.cpp:8270
+
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition Context.cpp:1750
+
helios::Context::calculatePrimitiveDataAreaWeightedMean
void calculatePrimitiveDataAreaWeightedMean(const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
Calculate mean of primitive data values (float) for a subset of primitives, where each value in the m...
Definition Context_data.cpp:1413
+
helios::Context::getDiskObjectSize
helios::vec2 getDiskObjectSize(uint ObjID) const
get the size of a Disk object from the context
Definition Context.cpp:8242
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::areObjectPrimitivesComplete
bool areObjectPrimitivesComplete(uint objID) const
Method to query whether all object primitives are in tact.
Definition Context.cpp:2540
+
helios::Context::getConeObjectLength
float getConeObjectLength(uint ObjID) const
get the length of a Cone object from the context
Definition Context.cpp:8274
+
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition Context.cpp:3312
+
helios::Context::scalePrimitiveAboutPoint
void scalePrimitiveAboutPoint(uint UUID, const helios::vec3 &S, const helios::vec3 point)
Scale a primitive using its UUID about an arbitrary point in space.
Definition Context.cpp:1512
+
helios::Context::useObjectTextureColor
void useObjectTextureColor(uint ObjID)
For all primitives in the Compound Object, use the texture map to color the primitives rather than th...
Definition Context.cpp:7988
+
helios::Context::getSphereObjectSubdivisionCount
uint getSphereObjectSubdivisionCount(uint ObjID) const
get the subdivision count of a Sphere object from the context
Definition Context.cpp:8148
+
helios::Context::scanXMLForTag
static bool scanXMLForTag(const std::string &filename, const std::string &tag, const std::string &label="")
Scan a Helios XML file to check if a tag exists.
Definition Context_fileIO.cpp:2403
+
helios::Context::setLocation
void setLocation(const helios::Location &location)
Set the location of the simulation (latitude, longitude, and UTC offset)
Definition Context.cpp:1170
+
helios::Context::listObjectData
std::vector< std::string > listObjectData(uint ObjID) const
Return labels for all object data for this particular object.
Definition Context_data.cpp:3083
+
helios::Context::getConeObjectNodeRadii
std::vector< float > getConeObjectNodeRadii(uint ObjID) const
get the node radii of a Cone object from the context
Definition Context.cpp:8258
+
helios::Context::listGlobalData
std::vector< std::string > listGlobalData() const
List the labels for all global data in the Context.
Definition Context_data.cpp:4522
+
helios::Context::writeXML_byobject
void writeXML_byobject(const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
Write Context geometry and data to XML file for a subset of compound object IDs in the context.
Definition Context_fileIO.cpp:2662
+
helios::Context::getBoxObjectVolume
float getBoxObjectVolume(uint ObjID) const
get the volume of a Box object from the context
Definition Context.cpp:8234
+
helios::Context::copyObjectData
void copyObjectData(uint source_objID, uint destination_objID)
copy all object data from one compound object to another
Definition Context_data.cpp:2990
+
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition Context.cpp:1136
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::Context::duplicateGlobalData
void duplicateGlobalData(const char *old_label, const char *new_label)
Make a copy of global data.
Definition Context_data.cpp:4062
+
helios::Context::getSphereObjectVolume
float getSphereObjectVolume(uint ObjID) const
get the volume of a Sphere object from the context
Definition Context.cpp:8152
+
helios::Context::setObjectTransformationMatrix
void setObjectTransformationMatrix(uint ObjID, float(&T)[16])
Method to set the Affine transformation matrix of an Object.
Definition Context.cpp:7940
+
helios::Context::cropDomain
void cropDomain(std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
Crop specified UUIDs such that they lie within some specified axis-aligned box.
Definition Context.cpp:2213
helios::Context::operator=
void operator=(const Context &)=delete
Deleted assignment operator to prevent copying of Context.
-
helios::Context::setTubeNodes
void setTubeNodes(uint ObjID, const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition: Context.cpp:8215
-
helios::Context::getLocation
helios::Location getLocation() const
Get the location of the simulation (latitude, longitude, and UTC offset)
Definition: Context.cpp:1174
-
helios::Context::selfTest
static int selfTest()
Run a self-test of the Context. The Context self-test runs through validation checks of Context-relat...
Definition: selfTest.cpp:20
-
helios::Context::getConeObjectNodeRadius
float getConeObjectNodeRadius(uint ObjID, int number) const
get a node radius of a Cone object from the context
Definition: Context.cpp:8266
-
helios::Context::cleanDeletedObjectIDs
void cleanDeletedObjectIDs(std::vector< uint > &objIDs) const
Delete Object IDs from vector if objects no longer exist (1D vector)
Definition: Context.cpp:2544
-
helios::Context::getConeObjectVolume
float getConeObjectVolume(uint ObjID) const
get the volume of a Cone object from the context
Definition: Context.cpp:8278
-
helios::Context::getBoxObjectCenter
helios::vec3 getBoxObjectCenter(uint ObjID) const
get the center of a Box object from the context
Definition: Context.cpp:8222
-
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:2969
-
helios::Context::setPrimitiveTransformationMatrix
void setPrimitiveTransformationMatrix(uint UUID, float(&T)[16])
Method to set the Affine transformation matrix of a Primitive.
Definition: Context.cpp:7112
-
helios::Context::sumPrimitiveSurfaceArea
float sumPrimitiveSurfaceArea(const std::vector< uint > &UUIDs) const
Sum the one-sided surface area of a group of primitives.
Definition: Context_data.cpp:2267
-
helios::Context::getObjectTransformationMatrix
void getObjectTransformationMatrix(uint ObjID, float(&T)[16]) const
Method to return the Affine transformation matrix of an Object.
Definition: Context.cpp:7936
-
helios::Context::setTubeRadii
void setTubeRadii(uint ObjID, const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition: Context.cpp:8201
-
helios::Context::objectHasTexture
bool objectHasTexture(uint ObjID) const
Method to check whether an Object has texture data.
Definition: Context.cpp:7950
-
helios::Context::scaleObject
void scaleObject(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2877
-
helios::Disk
Disk compound object class.
Definition: Context.h:795
-
helios::Disk::getSize
vec2 getSize() const
Get the lateral dimensions of the disk object.
Definition: Context.cpp:4029
-
helios::Disk::getSubdivisionCount
int2 getSubdivisionCount() const
Get the number of sub-triangle divisions of the disk object.
Definition: Context.cpp:4061
+
helios::Context::setTubeNodes
void setTubeNodes(uint ObjID, const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition Context.cpp:8215
+
helios::Context::getLocation
helios::Location getLocation() const
Get the location of the simulation (latitude, longitude, and UTC offset)
Definition Context.cpp:1174
+
helios::Context::selfTest
static int selfTest()
Run a self-test of the Context. The Context self-test runs through validation checks of Context-relat...
Definition selfTest.cpp:20
+
helios::Context::getConeObjectNodeRadius
float getConeObjectNodeRadius(uint ObjID, int number) const
get a node radius of a Cone object from the context
Definition Context.cpp:8266
+
helios::Context::cleanDeletedObjectIDs
void cleanDeletedObjectIDs(std::vector< uint > &objIDs) const
Delete Object IDs from vector if objects no longer exist (1D vector)
Definition Context.cpp:2544
+
helios::Context::getConeObjectVolume
float getConeObjectVolume(uint ObjID) const
get the volume of a Cone object from the context
Definition Context.cpp:8278
+
helios::Context::getBoxObjectCenter
helios::vec3 getBoxObjectCenter(uint ObjID) const
get the center of a Box object from the context
Definition Context.cpp:8222
+
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:2969
+
helios::Context::setPrimitiveTransformationMatrix
void setPrimitiveTransformationMatrix(uint UUID, float(&T)[16])
Method to set the Affine transformation matrix of a Primitive.
Definition Context.cpp:7112
+
helios::Context::sumPrimitiveSurfaceArea
float sumPrimitiveSurfaceArea(const std::vector< uint > &UUIDs) const
Sum the one-sided surface area of a group of primitives.
Definition Context_data.cpp:2267
+
helios::Context::getObjectTransformationMatrix
void getObjectTransformationMatrix(uint ObjID, float(&T)[16]) const
Method to return the Affine transformation matrix of an Object.
Definition Context.cpp:7936
+
helios::Context::setTubeRadii
void setTubeRadii(uint ObjID, const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition Context.cpp:8201
+
helios::Context::objectHasTexture
bool objectHasTexture(uint ObjID) const
Method to check whether an Object has texture data.
Definition Context.cpp:7950
+
helios::Context::scaleObject
void scaleObject(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2877
+
helios::Disk
Disk compound object class.
Definition Context.h:795
+
helios::Disk::getSize
vec2 getSize() const
Get the lateral dimensions of the disk object.
Definition Context.cpp:4029
+
helios::Disk::getSubdivisionCount
int2 getSubdivisionCount() const
Get the number of sub-triangle divisions of the disk object.
Definition Context.cpp:4061
helios::Disk::~Disk
~Disk() override=default
Disk destructor.
-
helios::Disk::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the disk object.
Definition: Context.cpp:4045
-
helios::Disk::setSubdivisionCount
void setSubdivisionCount(int2 subdiv)
Set the number of disk sub-triangle divisions.
Definition: Context.cpp:4065
-
helios::Polymesh
Polymesh compound object class.
Definition: Context.h:828
+
helios::Disk::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the disk object.
Definition Context.cpp:4045
+
helios::Disk::Disk
Disk(uint a_OID, const std::vector< uint > &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:4009
+
helios::Disk::setSubdivisionCount
void setSubdivisionCount(int2 subdiv)
Set the number of disk sub-triangle divisions.
Definition Context.cpp:4065
+
helios::Polymesh
Polymesh compound object class.
Definition Context.h:828
helios::Polymesh::~Polymesh
~Polymesh() override=default
Polymesh destructor.
-
helios::Polymesh::getVolume
float getVolume() const
Get the volume of the polymesh object.
Definition: Context.cpp:4088
-
helios::Sphere
Sphere compound object class.
Definition: Context.h:624
-
helios::Sphere::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-patch divisions of the sphere object.
Definition: Context.cpp:3455
-
helios::Sphere::getRadius
helios::vec3 getRadius() const
Get the radius of the sphere.
Definition: Context.cpp:3417
-
helios::Sphere::getVolume
float getVolume() const
Get the volume of the sphere object.
Definition: Context.cpp:3463
-
helios::Sphere::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the sphere object.
Definition: Context.cpp:3439
-
helios::Sphere::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of sphere tesselation divisions.
Definition: Context.cpp:3459
+
helios::Polymesh::Polymesh
Polymesh(uint a_OID, const std::vector< uint > &a_UUIDs, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:4069
+
helios::Polymesh::getVolume
float getVolume() const
Get the volume of the polymesh object.
Definition Context.cpp:4088
+
helios::Sphere
Sphere compound object class.
Definition Context.h:624
+
helios::Sphere::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-patch divisions of the sphere object.
Definition Context.cpp:3455
+
helios::Sphere::getRadius
helios::vec3 getRadius() const
Get the radius of the sphere.
Definition Context.cpp:3417
+
helios::Sphere::getVolume
float getVolume() const
Get the volume of the sphere object.
Definition Context.cpp:3463
+
helios::Sphere::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the sphere object.
Definition Context.cpp:3439
+
helios::Sphere::Sphere
Sphere(uint a_OID, const std::vector< uint > &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3397
+
helios::Sphere::setSubdivisionCount
void setSubdivisionCount(uint subdiv)
Set the number of sphere tesselation divisions.
Definition Context.cpp:3459
helios::Sphere::~Sphere
~Sphere() override=default
Sphere destructor.
-
helios::Texture
Texture map data structure.
Definition: Context.h:67
-
helios::Texture::getTextureFile
std::string getTextureFile() const
Get the name/path of the texture map file.
Definition: Context.cpp:129
-
helios::Texture::hasTransparencyChannel
bool hasTransparencyChannel() const
Check whether the texture has a transparency channel.
Definition: Context.cpp:137
-
helios::Texture::getImageResolution
helios::int2 getImageResolution() const
Get the size of the texture in pixels (horizontal x vertical)
Definition: Context.cpp:133
-
helios::Texture::getSolidFraction
float getSolidFraction() const
Get the solid fraction of the texture transparency channel (if it exists)
Definition: Context.cpp:145
-
helios::Texture::getTransparencyData
const std::vector< std::vector< bool > > * getTransparencyData() const
Get the data in the texture transparency channel (if it exists)
Definition: Context.cpp:141
-
helios::Tile
Tile compound object class.
Definition: Context.h:581
+
helios::Texture
Texture map data structure.
Definition Context.h:67
+
helios::Texture::getTextureFile
std::string getTextureFile() const
Get the name/path of the texture map file.
Definition Context.cpp:129
+
helios::Texture::hasTransparencyChannel
bool hasTransparencyChannel() const
Check whether the texture has a transparency channel.
Definition Context.cpp:137
+
helios::Texture::getImageResolution
helios::int2 getImageResolution() const
Get the size of the texture in pixels (horizontal x vertical)
Definition Context.cpp:133
+
helios::Texture::getSolidFraction
float getSolidFraction() const
Get the solid fraction of the texture transparency channel (if it exists)
Definition Context.cpp:145
+
helios::Texture::getTransparencyData
const std::vector< std::vector< bool > > * getTransparencyData() const
Get the data in the texture transparency channel (if it exists)
Definition Context.cpp:141
+
helios::Tile
Tile compound object class.
Definition Context.h:581
helios::Tile::~Tile
~Tile() override=default
Tile destructor.
-
helios::Tile::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the tile object.
Definition: Context.cpp:3326
-
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition: Context.cpp:3343
-
helios::Tile::setSubdivisionCount
void setSubdivisionCount(const helios::int2 &subdiv)
Set the number of tile sub-patch divisions.
Definition: Context.cpp:3347
-
helios::Tile::getTextureUV
std::vector< helios::vec2 > getTextureUV() const
Get the normalized (u,v) coordinates of the texture at each of the four corners of the tile object.
Definition: Context.cpp:3391
-
helios::Tile::getSize
helios::vec2 getSize() const
Get the dimensions of the entire tile object.
Definition: Context.cpp:3319
-
helios::Tile::getVertices
std::vector< helios::vec3 > getVertices() const
Get the Cartesian coordinates of each of the four corners of the tile object.
Definition: Context.cpp:3352
-
helios::Tile::getNormal
vec3 getNormal() const
Get a unit vector normal to the tile object surface.
Definition: Context.cpp:3385
-
helios::Tube
Tube compound object class.
Definition: Context.h:660
+
helios::Tile::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the tile object.
Definition Context.cpp:3326
+
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition Context.cpp:3343
+
helios::Tile::setSubdivisionCount
void setSubdivisionCount(const helios::int2 &subdiv)
Set the number of tile sub-patch divisions.
Definition Context.cpp:3347
+
helios::Tile::getTextureUV
std::vector< helios::vec2 > getTextureUV() const
Get the normalized (u,v) coordinates of the texture at each of the four corners of the tile object.
Definition Context.cpp:3391
+
helios::Tile::getSize
helios::vec2 getSize() const
Get the dimensions of the entire tile object.
Definition Context.cpp:3319
+
helios::Tile::getVertices
std::vector< helios::vec3 > getVertices() const
Get the Cartesian coordinates of each of the four corners of the tile object.
Definition Context.cpp:3352
+
helios::Tile::getNormal
vec3 getNormal() const
Get a unit vector normal to the tile object surface.
Definition Context.cpp:3385
+
helios::Tile::Tile
Tile(uint a_OID, const std::vector< uint > &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3299
+
helios::Tube
Tube compound object class.
Definition Context.h:660
+
helios::Tube::Tube
Tube(uint a_OID, const std::vector< uint > &a_UUIDs, const std::vector< vec3 > &a_nodes, const std::vector< float > &a_radius, const std::vector< helios::RGBcolor > &a_colors, const std::vector< std::vector< helios::vec3 > > &a_triangle_vertices, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
Default constructor.
Definition Context.cpp:3468
helios::Tube::~Tube
~Tube() override=default
Tube destructor.
-
helios::Tube::getSegmentVolume
float getSegmentVolume(uint segment_index) const
Get the volume of a segment within the tube object.
Definition: Context.cpp:3561
-
helios::Tube::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the tube object nodes.
Definition: Context.cpp:3508
-
helios::Tube::scaleTubeGirth
void scaleTubeGirth(float S)
Scale the girth of the tube object.
Definition: Context.cpp:3826
-
helios::Tube::setTubeRadii
void setTubeRadii(const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition: Context.cpp:3846
-
helios::Tube::getTriangleVertices
std::vector< std::vector< helios::vec3 > > getTriangleVertices() const
Get positions of triangle vertices comprising the tube object.
Definition: Context.cpp:3529
-
helios::Tube::getVolume
float getVolume() const
Get the volume of the tube object.
Definition: Context.cpp:3547
-
helios::Tube::appendTubeSegment
void appendTubeSegment(const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color)
Append an additional segment to the existing tube object.
Definition: Context.cpp:3575
-
helios::Tube::getNodeColors
std::vector< helios::RGBcolor > getNodeColors() const
Get the colors at each of the tube object nodes.
Definition: Context.cpp:3525
-
helios::Tube::getNodes
std::vector< helios::vec3 > getNodes() const
Get the Cartesian coordinates of each of the tube object nodes.
Definition: Context.cpp:3493
-
helios::Tube::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the tube object.
Definition: Context.cpp:3533
-
helios::Tube::scaleTubeLength
void scaleTubeLength(float S)
Scale the length of the tube object.
Definition: Context.cpp:3869
-
helios::Tube::getLength
float getLength() const
Get the length of the tube object.
Definition: Context.cpp:3537
-
helios::Tube::setTubeNodes
void setTubeNodes(const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition: Context.cpp:3895
-
helios::XMLparser
Class for parsing XML input files.
Definition: Context.h:1698
-
helios::XMLparser::parse_data_vec3
static int parse_data_vec3(const pugi::xml_node &node_data, std::vector< vec3 > &data)
Parse vector data of type 'vec3' within an XML tag.
Definition: Context_fileIO.cpp:154
-
helios::XMLparser::parse_data_int2
static int parse_data_int2(const pugi::xml_node &node_data, std::vector< int2 > &data)
Parse vector data of type 'int2' within an XML tag.
Definition: Context_fileIO.cpp:206
-
helios::XMLparser::parse_radius
static int parse_radius(const pugi::xml_node &node_data, std::vector< float > &radius)
Parse the value within a <radius> (radius at nodes of a tube or cone) tag.
Definition: Context_fileIO.cpp:491
-
helios::XMLparser::parse_data_float
static int parse_data_float(const pugi::xml_node &node_data, std::vector< float > &data)
Parse vector data of type 'float' within an XML tag.
Definition: Context_fileIO.cpp:20
-
helios::XMLparser::parse_transform
static int parse_transform(const pugi::xml_node &node_data, float(&transform)[16])
Parse the value within a <transform> (transformation matrix) tag.
Definition: Context_fileIO.cpp:298
-
helios::XMLparser::parse_data_uint
static int parse_data_uint(const pugi::xml_node &node_data, std::vector< uint > &data)
Parse vector data of type 'uint' within an XML tag.
Definition: Context_fileIO.cpp:89
-
helios::XMLparser::parse_subdivisions
static int parse_subdivisions(const pugi::xml_node &node_data, uint &subdivisions)
Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
Definition: Context_fileIO.cpp:411
-
helios::XMLparser::parse_data_vec4
static int parse_data_vec4(const pugi::xml_node &node_data, std::vector< vec4 > &data)
Parse vector data of type 'vac4' within an XML tag.
Definition: Context_fileIO.cpp:180
-
helios::XMLparser::parse_data_int3
static int parse_data_int3(const pugi::xml_node &node_data, std::vector< int3 > &data)
Parse vector data of type 'int3' within an XML tag.
Definition: Context_fileIO.cpp:230
-
helios::XMLparser::parse_data_string
static int parse_data_string(const pugi::xml_node &node_data, std::vector< std::string > &data)
Parse vector data of type 'string' within an XML tag.
Definition: Context_fileIO.cpp:112
-
helios::XMLparser::parse_data_int
static int parse_data_int(const pugi::xml_node &node_data, std::vector< int > &data)
Parse vector data of type 'int' within an XML tag.
Definition: Context_fileIO.cpp:66
-
helios::XMLparser::parse_texture
static int parse_texture(const pugi::xml_node &node_data, std::string &texture)
Parse the value within an <texture> (path to image texture) tag.
Definition: Context_fileIO.cpp:327
-
helios::XMLparser::parse_data_vec2
static int parse_data_vec2(const pugi::xml_node &node_data, std::vector< vec2 > &data)
Parse vector data of type 'vec2' within an XML tag.
Definition: Context_fileIO.cpp:130
-
helios::XMLparser::parse_data_double
static int parse_data_double(const pugi::xml_node &node_data, std::vector< double > &data)
Parse vector data of type 'double' within an XML tag.
Definition: Context_fileIO.cpp:43
-
helios::XMLparser::parse_solid_fraction
static int parse_solid_fraction(const pugi::xml_node &node_data, float &solid_fraction)
Parse the value within a <solid_fraction> (primitive solid fraction) tag.
Definition: Context_fileIO.cpp:365
-
helios::XMLparser::parse_objID
static int parse_objID(const pugi::xml_node &node_data, uint &objID)
Parse the value within an <objID> (object ID) tag.
Definition: Context_fileIO.cpp:281
-
helios::XMLparser::parse_textureUV
static int parse_textureUV(const pugi::xml_node &node_data, std::vector< vec2 > &uvs)
Parse the value within a <textureUV> (texture coordinates) tag.
Definition: Context_fileIO.cpp:341
-
helios::XMLparser::parse_nodes
static int parse_nodes(const pugi::xml_node &node_data, std::vector< vec3 > &nodes)
Parse the value within a <nodes> (coordinates defining nodes of a tube or cone) tag.
Definition: Context_fileIO.cpp:465
-
helios::XMLparser::parse_data_int4
static int parse_data_int4(const pugi::xml_node &node_data, std::vector< int4 > &data)
Parse vector data of type 'int4' within an XML tag.
Definition: Context_fileIO.cpp:255
-
helios::XMLparser::parse_vertices
static int parse_vertices(const pugi::xml_node &node_data, std::vector< float > &vertices)
Parse the value within a <vertices> (primitive vertex coordinates) tag.
Definition: Context_fileIO.cpp:380
+
helios::Tube::getSegmentVolume
float getSegmentVolume(uint segment_index) const
Get the volume of a segment within the tube object.
Definition Context.cpp:3561
+
helios::Tube::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the tube object nodes.
Definition Context.cpp:3508
+
helios::Tube::scaleTubeGirth
void scaleTubeGirth(float S)
Scale the girth of the tube object.
Definition Context.cpp:3826
+
helios::Tube::setTubeRadii
void setTubeRadii(const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition Context.cpp:3846
+
helios::Tube::getTriangleVertices
std::vector< std::vector< helios::vec3 > > getTriangleVertices() const
Get positions of triangle vertices comprising the tube object.
Definition Context.cpp:3529
+
helios::Tube::getVolume
float getVolume() const
Get the volume of the tube object.
Definition Context.cpp:3547
+
helios::Tube::appendTubeSegment
void appendTubeSegment(const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color)
Append an additional segment to the existing tube object.
Definition Context.cpp:3575
+
helios::Tube::getNodeColors
std::vector< helios::RGBcolor > getNodeColors() const
Get the colors at each of the tube object nodes.
Definition Context.cpp:3525
+
helios::Tube::getNodes
std::vector< helios::vec3 > getNodes() const
Get the Cartesian coordinates of each of the tube object nodes.
Definition Context.cpp:3493
+
helios::Tube::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the tube object.
Definition Context.cpp:3533
+
helios::Tube::scaleTubeLength
void scaleTubeLength(float S)
Scale the length of the tube object.
Definition Context.cpp:3869
+
helios::Tube::getLength
float getLength() const
Get the length of the tube object.
Definition Context.cpp:3537
+
helios::Tube::setTubeNodes
void setTubeNodes(const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition Context.cpp:3895
+
helios::XMLparser
Class for parsing XML input files.
Definition Context.h:1698
+
helios::XMLparser::parse_data_vec3
static int parse_data_vec3(const pugi::xml_node &node_data, std::vector< vec3 > &data)
Parse vector data of type 'vec3' within an XML tag.
Definition Context_fileIO.cpp:154
+
helios::XMLparser::parse_data_int2
static int parse_data_int2(const pugi::xml_node &node_data, std::vector< int2 > &data)
Parse vector data of type 'int2' within an XML tag.
Definition Context_fileIO.cpp:206
+
helios::XMLparser::parse_radius
static int parse_radius(const pugi::xml_node &node_data, std::vector< float > &radius)
Parse the value within a <radius> (radius at nodes of a tube or cone) tag.
Definition Context_fileIO.cpp:491
+
helios::XMLparser::parse_data_float
static int parse_data_float(const pugi::xml_node &node_data, std::vector< float > &data)
Parse vector data of type 'float' within an XML tag.
Definition Context_fileIO.cpp:20
+
helios::XMLparser::parse_transform
static int parse_transform(const pugi::xml_node &node_data, float(&transform)[16])
Parse the value within a <transform> (transformation matrix) tag.
Definition Context_fileIO.cpp:298
+
helios::XMLparser::parse_data_uint
static int parse_data_uint(const pugi::xml_node &node_data, std::vector< uint > &data)
Parse vector data of type 'uint' within an XML tag.
Definition Context_fileIO.cpp:89
+
helios::XMLparser::parse_subdivisions
static int parse_subdivisions(const pugi::xml_node &node_data, uint &subdivisions)
Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
Definition Context_fileIO.cpp:411
+
helios::XMLparser::parse_data_vec4
static int parse_data_vec4(const pugi::xml_node &node_data, std::vector< vec4 > &data)
Parse vector data of type 'vac4' within an XML tag.
Definition Context_fileIO.cpp:180
+
helios::XMLparser::parse_data_int3
static int parse_data_int3(const pugi::xml_node &node_data, std::vector< int3 > &data)
Parse vector data of type 'int3' within an XML tag.
Definition Context_fileIO.cpp:230
+
helios::XMLparser::parse_data_string
static int parse_data_string(const pugi::xml_node &node_data, std::vector< std::string > &data)
Parse vector data of type 'string' within an XML tag.
Definition Context_fileIO.cpp:112
+
helios::XMLparser::parse_data_int
static int parse_data_int(const pugi::xml_node &node_data, std::vector< int > &data)
Parse vector data of type 'int' within an XML tag.
Definition Context_fileIO.cpp:66
+
helios::XMLparser::parse_texture
static int parse_texture(const pugi::xml_node &node_data, std::string &texture)
Parse the value within an <texture> (path to image texture) tag.
Definition Context_fileIO.cpp:327
+
helios::XMLparser::parse_data_vec2
static int parse_data_vec2(const pugi::xml_node &node_data, std::vector< vec2 > &data)
Parse vector data of type 'vec2' within an XML tag.
Definition Context_fileIO.cpp:130
+
helios::XMLparser::parse_data_double
static int parse_data_double(const pugi::xml_node &node_data, std::vector< double > &data)
Parse vector data of type 'double' within an XML tag.
Definition Context_fileIO.cpp:43
+
helios::XMLparser::parse_solid_fraction
static int parse_solid_fraction(const pugi::xml_node &node_data, float &solid_fraction)
Parse the value within a <solid_fraction> (primitive solid fraction) tag.
Definition Context_fileIO.cpp:365
+
helios::XMLparser::parse_objID
static int parse_objID(const pugi::xml_node &node_data, uint &objID)
Parse the value within an <objID> (object ID) tag.
Definition Context_fileIO.cpp:281
+
helios::XMLparser::parse_textureUV
static int parse_textureUV(const pugi::xml_node &node_data, std::vector< vec2 > &uvs)
Parse the value within a <textureUV> (texture coordinates) tag.
Definition Context_fileIO.cpp:341
+
helios::XMLparser::parse_nodes
static int parse_nodes(const pugi::xml_node &node_data, std::vector< vec3 > &nodes)
Parse the value within a <nodes> (coordinates defining nodes of a tube or cone) tag.
Definition Context_fileIO.cpp:465
+
helios::XMLparser::parse_data_int4
static int parse_data_int4(const pugi::xml_node &node_data, std::vector< int4 > &data)
Parse vector data of type 'int4' within an XML tag.
Definition Context_fileIO.cpp:255
+
helios::XMLparser::parse_vertices
static int parse_vertices(const pugi::xml_node &node_data, std::vector< float > &vertices)
Parse the value within a <vertices> (primitive vertex coordinates) tag.
Definition Context_fileIO.cpp:380
-
helios::Context::addDiskObject
uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition: Context.cpp:5256
-
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:4728
-
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition: Context.cpp:5426
-
helios::Context::addDisk
std::vector< uint > addDisk(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition: Context.cpp:6356
-
helios::Context::addBox
std::vector< uint > addBox(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition: Context.cpp:6147
-
helios::Context::addBoxObject
uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition: Context.cpp:5000
-
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition: Context.cpp:5399
-
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:5646
-
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:5930
-
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:5809
-
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:4550
-
helios::Context::addCone
std::vector< uint > addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone to the Context.
Definition: Context.cpp:6459
-
helios::Context::addSphereObject
uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:4310
-
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition: global.cpp:1100
-
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition: global.cpp:1146
-
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition: global.cpp:1069
-
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition: global.cpp:1084
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition: Context.cpp:1759
-
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition: Context.cpp:1372
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::Context::setCurrentTimeseriesPoint
void setCurrentTimeseriesPoint(const char *label, uint index)
Set the Context date and time by providing the index of a timeseries data point.
Definition: Context.cpp:1886
-
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition: Context.cpp:1958
-
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition: Context.cpp:2014
-
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition: Context.cpp:1894
-
helios::Context::doesTimeseriesVariableExist
bool doesTimeseriesVariableExist(const char *label) const
Query whether a timeseries variable exists.
Definition: Context.cpp:2026
-
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition: Context.cpp:1823
-
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition: Context.cpp:1994
- -
helios::GlobalData
Structure for Global Data Entities.
Definition: Context.h:102
-
helios::Location
Location vector.
Definition: helios_vector_types.h:1470
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
- -
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int4
Vector of four elements of type 'int'.
Definition: helios_vector_types.h:243
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec4
Vector of four elements of type 'float'.
Definition: helios_vector_types.h:673
+
helios::Context::addDiskObject
uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition Context.cpp:5256
+
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:4728
+
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition Context.cpp:5426
+
helios::Context::addDisk
std::vector< uint > addDisk(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition Context.cpp:6356
+
helios::Context::addBox
std::vector< uint > addBox(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition Context.cpp:6147
+
helios::Context::addBoxObject
uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition Context.cpp:5000
+
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition Context.cpp:5399
+
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:5646
+
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:5930
+
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:5809
+
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:4550
+
helios::Context::addCone
std::vector< uint > addCone(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone to the Context.
Definition Context.cpp:6459
+
helios::Context::addSphereObject
uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:4310
+
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition global.cpp:1100
+
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition global.cpp:1146
+
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition global.cpp:1069
+
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition global.cpp:1084
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition Context.cpp:1759
+
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition Context.cpp:1372
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::Context::setCurrentTimeseriesPoint
void setCurrentTimeseriesPoint(const char *label, uint index)
Set the Context date and time by providing the index of a timeseries data point.
Definition Context.cpp:1886
+
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition Context.cpp:1958
+
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition Context.cpp:2014
+
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition Context.cpp:1894
+
helios::Context::doesTimeseriesVariableExist
bool doesTimeseriesVariableExist(const char *label) const
Query whether a timeseries variable exists.
Definition Context.cpp:2026
+
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition Context.cpp:1823
+
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition Context.cpp:1994
+ +
helios::GlobalData
Structure for Global Data Entities.
Definition Context.h:102
+ +
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+ +
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int4
Vector of four elements of type 'int'.
Definition helios_vector_types.h:243
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec4
Vector of four elements of type 'float'.
Definition helios_vector_types.h:673
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_context__data_8cpp.html b/doc/html/_context__data_8cpp.html index d15696c4e..0bbcd8204 100644 --- a/doc/html/_context__data_8cpp.html +++ b/doc/html/_context__data_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Context_data.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_context__data_8cpp_source.html b/doc/html/_context__data_8cpp_source.html index 03843afe3..8f498bf47 100644 --- a/doc/html/_context__data_8cpp_source.html +++ b/doc/html/_context__data_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Context_data.cpp
@@ -732,156 +744,203 @@
652
653}
654
+
655void Context::setPrimitiveData( const uint& UUID, const char* label, const int& data ){
656 if( primitives.find(UUID) == primitives.end() ){
657 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
658 }
659 primitives.at(UUID)->setPrimitiveData(label,data);
660}
+
661
+
662void Context::setPrimitiveData( const uint& UUID, const char* label, const uint& data ){
663 if( primitives.find(UUID) == primitives.end() ){
664 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
665 }
666 primitives.at(UUID)->setPrimitiveData(label,data);
667}
+
668
+
669void Context::setPrimitiveData( const uint& UUID, const char* label, const float& data ){
670 if( primitives.find(UUID) == primitives.end() ){
671 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
672 }
673 primitives.at(UUID)->setPrimitiveData(label,data);
674}
+
675
+
676void Context::setPrimitiveData( const uint& UUID, const char* label, const double& data ){
677 if( primitives.find(UUID) == primitives.end() ){
678 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
679 }
680 primitives.at(UUID)->setPrimitiveData(label,data);
681}
+
682
+
683void Context::setPrimitiveData( const uint& UUID, const char* label, const helios::vec2& data ){
684 if( primitives.find(UUID) == primitives.end() ){
685 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
686 }
687 primitives.at(UUID)->setPrimitiveData(label,data);
688}
+
689
+
690void Context::setPrimitiveData( const uint& UUID, const char* label, const helios::vec3& data ){
691 if( primitives.find(UUID) == primitives.end() ){
692 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
693 }
694 primitives.at(UUID)->setPrimitiveData(label,data);
695}
+
696
+
697void Context::setPrimitiveData( const uint& UUID, const char* label, const helios::vec4& data ){
698 if( primitives.find(UUID) == primitives.end() ){
699 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
700 }
701 primitives.at(UUID)->setPrimitiveData(label,data);
702}
+
703
+
704void Context::setPrimitiveData( const uint& UUID, const char* label, const helios::int2& data ){
705 if( primitives.find(UUID) == primitives.end() ){
706 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
707 }
708 primitives.at(UUID)->setPrimitiveData(label,data);
709}
+
710
+
711void Context::setPrimitiveData( const uint& UUID, const char* label, const helios::int3& data ){
712 if( primitives.find(UUID) == primitives.end() ){
713 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
714 }
715 primitives.at(UUID)->setPrimitiveData(label,data);
716}
+
717
+
718void Context::setPrimitiveData( const uint& UUID, const char* label, const helios::int4& data ){
719 if( primitives.find(UUID) == primitives.end() ){
720 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
721 }
722 primitives.at(UUID)->setPrimitiveData(label,data);
723}
+
724
+
725void Context::setPrimitiveData( const uint& UUID, const char* label, const std::string& data ){
726 if( primitives.find(UUID) == primitives.end() ){
727 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
728 }
729 primitives.at(UUID)->setPrimitiveData(label,data);
730}
+
731
+
732void Context::setPrimitiveData( const uint& UUID, const char* label, HeliosDataType type, uint size, void* data ){
733 if( primitives.find(UUID) == primitives.end() ){
734 helios_runtime_error( "ERROR (Context::setPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
735 }
736 primitives.at(UUID)->setPrimitiveData(label,type,size,data);
737}
+
738
+
739void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const int& data ){
740 for( uint UUID : UUIDs){
741 setPrimitiveData( UUID, label, data );
742 }
743}
+
744
+
745void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const uint& data ){
746 for( uint UUID : UUIDs){
747 setPrimitiveData( UUID, label, data );
748 }
749}
+
750
+
751void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const float& data ){
752 for( uint UUID : UUIDs){
753 setPrimitiveData( UUID, label, data );
754 }
755}
+
756
+
757void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const double& data ){
758 for( uint UUID : UUIDs){
759 setPrimitiveData( UUID, label, data );
760 }
761}
+
762
+
763void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const helios::vec2& data ){
764 for( uint UUID : UUIDs){
765 setPrimitiveData( UUID, label, data );
766 }
767}
+
768
+
769void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const helios::vec3& data ){
770 for( uint UUID : UUIDs){
771 setPrimitiveData( UUID, label, data );
772 }
773}
+
774
+
775void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const helios::vec4& data ){
776 for( uint UUID : UUIDs){
777 setPrimitiveData( UUID, label, data );
778 }
779}
+
780
+
781void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const helios::int2& data ){
782 for( uint UUID : UUIDs){
783 setPrimitiveData( UUID, label, data );
784 }
785}
+
786
+
787void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const helios::int3& data ){
788 for( uint UUID : UUIDs){
789 setPrimitiveData( UUID, label, data );
790 }
791}
+
792
+
793void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const helios::int4& data ){
794 for( uint UUID : UUIDs){
795 setPrimitiveData( UUID, label, data );
796 }
797}
+
798
+
799void Context::setPrimitiveData( const std::vector<uint>& UUIDs, const char* label, const std::string& data ){
800 for( uint UUID : UUIDs){
801 setPrimitiveData( UUID, label, data );
802 }
803}
+
804
+
805void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const int& data ){
806 for(const auto & j : UUIDs){
807 for( const auto& UUID : j ){
@@ -889,7 +948,9 @@
809 }
810 }
811}
+
812
+
813void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const uint& data ){
814 for(const auto & j : UUIDs){
815 for( const auto& UUID : j ){
@@ -897,7 +958,9 @@
817 }
818 }
819}
+
820
+
821void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const float& data ){
822 for(const auto & j : UUIDs){
823 for( const auto& UUID : j ){
@@ -905,7 +968,9 @@
825 }
826 }
827}
+
828
+
829void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const double& data ){
830 for(const auto & j : UUIDs){
831 for( const auto& UUID : j ){
@@ -913,7 +978,9 @@
833 }
834 }
835}
+
836
+
837void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const helios::vec2& data ){
838 for(const auto & j : UUIDs){
839 for( const auto& UUID : j ){
@@ -921,7 +988,9 @@
841 }
842 }
843}
+
844
+
845void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const helios::vec3& data ){
846 for(const auto & j : UUIDs){
847 for( const auto& UUID : j ){
@@ -929,7 +998,9 @@
849 }
850 }
851}
+
852
+
853void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const helios::vec4& data ){
854 for(const auto & j : UUIDs){
855 for( const auto& UUID : j ){
@@ -937,7 +1008,9 @@
857 }
858 }
859}
+
860
+
861void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const helios::int2& data ){
862 for(const auto & j : UUIDs){
863 for( const auto& UUID : j ){
@@ -945,7 +1018,9 @@
865 }
866 }
867}
+
868
+
869void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const helios::int3& data ){
870 for(const auto & j : UUIDs){
871 for( const auto& UUID : j ){
@@ -953,7 +1028,9 @@
873 }
874 }
875}
+
876
+
877void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const helios::int4& data ){
878 for(const auto & j : UUIDs){
879 for( const auto& UUID : j ){
@@ -961,7 +1038,9 @@
881 }
882 }
883}
+
884
+
885void Context::setPrimitiveData( const std::vector<std::vector<uint> >& UUIDs, const char* label, const std::string& data ){
886 for(const auto & j : UUIDs){
887 for( const auto& UUID : j ){
@@ -969,7 +1048,9 @@
889 }
890 }
891}
+
892
+
893void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const int& data ){
894 for(const auto & j : UUIDs){
895 for( const auto& UUID : j ){
@@ -977,7 +1058,9 @@
897 }
898 }
899}
+
900
+
901void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const uint& data ){
902 for(const auto & j : UUIDs){
903 for( const auto& i : j ) {
@@ -987,7 +1070,9 @@
907 }
908 }
909}
+
910
+
911void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const float& data ){
912 for(const auto & j : UUIDs){
913 for( const auto& i : j ) {
@@ -997,7 +1082,9 @@
917 }
918 }
919}
+
920
+
921void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const double& data ){
922 for(const auto & j : UUIDs){
923 for( const auto& i : j ) {
@@ -1007,7 +1094,9 @@
927 }
928 }
929}
+
930
+
931void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const helios::vec2& data ){
932 for(const auto & j : UUIDs){
933 for( const auto& i : j ) {
@@ -1017,7 +1106,9 @@
937 }
938 }
939}
+
940
+
941void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const helios::vec3& data ){
942 for(const auto & j : UUIDs){
943 for( const auto& i : j ) {
@@ -1027,7 +1118,9 @@
947 }
948 }
949}
+
950
+
951void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const helios::vec4& data ){
952 for(const auto & j : UUIDs){
953 for( const auto& i : j ) {
@@ -1037,7 +1130,9 @@
957 }
958 }
959}
+
960
+
961void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const helios::int2& data ){
962 for(const auto & j : UUIDs){
963 for( const auto& i : j ) {
@@ -1047,7 +1142,9 @@
967 }
968 }
969}
+
970
+
971void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const helios::int3& data ){
972 for(const auto & j : UUIDs){
973 for( const auto& i : j ) {
@@ -1057,7 +1154,9 @@
977 }
978 }
979}
+
980
+
981void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const helios::int4& data ){
982 for(const auto & j : UUIDs){
983 for( const auto& i : j ) {
@@ -1067,7 +1166,9 @@
987 }
988 }
989}
+
990
+
991void Context::setPrimitiveData( const std::vector<std::vector<std::vector<uint> > >& UUIDs, const char* label, const std::string& data ){
992 for(const auto & j : UUIDs){
993 for( const auto& i : j ) {
@@ -1077,189 +1178,243 @@
997 }
998 }
999}
+
1000
+
1001void Context::getPrimitiveData(uint UUID, const char* label, int& data ) const{
1002 if( primitives.find(UUID) == primitives.end() ){
1003 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1004 }
1005 primitives.at(UUID)->getPrimitiveData(label,data);
1006}
+
1007
+
1008void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<int>& data ) const{
1009 if( primitives.find(UUID) == primitives.end() ){
1010 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1011 }
1012 primitives.at(UUID)->getPrimitiveData(label,data);
1013}
+
1014
+
1015void Context::getPrimitiveData( const uint UUID, const char* label, uint& data ) const{
1016 if( primitives.find(UUID) == primitives.end() ){
1017 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1018 }
1019 primitives.at(UUID)->getPrimitiveData(label,data);
1020}
+
1021
+
1022void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<uint>& data ) const{
1023 if( primitives.find(UUID) == primitives.end() ){
1024 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1025 }
1026 primitives.at(UUID)->getPrimitiveData(label,data);
1027}
+
1028
+
1029void Context::getPrimitiveData( const uint UUID, const char* label, float& data ) const{
1030 if( primitives.find(UUID) == primitives.end() ){
1031 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1032 }
1033 primitives.at(UUID)->getPrimitiveData(label,data);
1034}
+
1035
+
1036void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<float>& data ) const{
1037 if( primitives.find(UUID) == primitives.end() ){
1038 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1039 }
1040 primitives.at(UUID)->getPrimitiveData(label,data);
1041}
+
1042
+
1043void Context::getPrimitiveData( const uint UUID, const char* label, double& data ) const{
1044 if( primitives.find(UUID) == primitives.end() ){
1045 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1046 }
1047 primitives.at(UUID)->getPrimitiveData(label,data);
1048}
+
1049
+
1050void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<double>& data ) const{
1051 if( primitives.find(UUID) == primitives.end() ){
1052 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1053 }
1054 primitives.at(UUID)->getPrimitiveData(label,data);
1055}
+
1056
+
1057void Context::getPrimitiveData( const uint UUID, const char* label, vec2& data ) const{
1058 if( primitives.find(UUID) == primitives.end() ){
1059 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1060 }
1061 primitives.at(UUID)->getPrimitiveData(label,data);
1062}
+
1063
+
1064void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<vec2>& data ) const{
1065 if( primitives.find(UUID) == primitives.end() ){
1066 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1067 }
1068 primitives.at(UUID)->getPrimitiveData(label,data);
1069}
+
1070
+
1071void Context::getPrimitiveData( const uint UUID, const char* label, vec3& data ) const{
1072 if( primitives.find(UUID) == primitives.end() ){
1073 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1074 }
1075 primitives.at(UUID)->getPrimitiveData(label,data);
1076}
+
1077
+
1078void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<vec3>& data ) const{
1079 if( primitives.find(UUID) == primitives.end() ){
1080 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1081 }
1082 primitives.at(UUID)->getPrimitiveData(label,data);
1083}
+
1084
+
1085void Context::getPrimitiveData( const uint UUID, const char* label, vec4& data ) const{
1086 if( primitives.find(UUID) == primitives.end() ){
1087 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1088 }
1089 primitives.at(UUID)->getPrimitiveData(label,data);
1090}
+
1091
+
1092void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<vec4>& data ) const{
1093 if( primitives.find(UUID) == primitives.end() ){
1094 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1095 }
1096 primitives.at(UUID)->getPrimitiveData(label,data);
1097}
+
1098
+
1099void Context::getPrimitiveData( const uint UUID, const char* label, int2& data ) const{
1100 if( primitives.find(UUID) == primitives.end() ){
1101 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1102 }
1103 primitives.at(UUID)->getPrimitiveData(label,data);
1104}
+
1105
+
1106void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<int2>& data ) const{
1107 if( primitives.find(UUID) == primitives.end() ){
1108 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1109 }
1110 primitives.at(UUID)->getPrimitiveData(label,data);
1111}
+
1112
+
1113void Context::getPrimitiveData( const uint UUID, const char* label, int3& data ) const{
1114 if( primitives.find(UUID) == primitives.end() ){
1115 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1116 }
1117 primitives.at(UUID)->getPrimitiveData(label,data);
1118}
+
1119
+
1120void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<int3>& data ) const{
1121 if( primitives.find(UUID) == primitives.end() ){
1122 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1123 }
1124 primitives.at(UUID)->getPrimitiveData(label,data);
1125}
+
1126
+
1127void Context::getPrimitiveData( const uint UUID, const char* label, int4& data ) const{
1128 if( primitives.find(UUID) == primitives.end() ){
1129 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1130 }
1131 primitives.at(UUID)->getPrimitiveData(label,data);
1132}
+
1133
+
1134void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<int4>& data ) const{
1135 if( primitives.find(UUID) == primitives.end() ){
1136 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1137 }
1138 primitives.at(UUID)->getPrimitiveData(label,data);
1139}
+
1140
+
1141void Context::getPrimitiveData( const uint UUID, const char* label, std::string& data ) const{
1142 if( primitives.find(UUID) == primitives.end() ){
1143 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1144 }
1145 primitives.at(UUID)->getPrimitiveData(label,data);
1146}
+
1147
+
1148void Context::getPrimitiveData( const uint UUID, const char* label, std::vector<std::string>& data ) const{
1149 if( primitives.find(UUID) == primitives.end() ){
1150 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1151 }
1152 primitives.at(UUID)->getPrimitiveData(label,data);
1153}
+
1154
+
1155HeliosDataType Context::getPrimitiveDataType( const uint UUID, const char* label )const{
1156 if( primitives.find(UUID) == primitives.end() ){
1157 helios_runtime_error("ERROR (Context::getPrimitiveDataType): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1158 }
1159 return primitives.at(UUID)->getPrimitiveDataType(label);
1160}
+
1161
+
1162uint Context::getPrimitiveDataSize( const uint UUID, const char* label )const{
1163 if( primitives.find(UUID) == primitives.end() ){
1164 helios_runtime_error("ERROR (Context::getPrimitiveDataSize): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1165 }
1166 return primitives.at(UUID)->getPrimitiveDataSize(label);
1167}
+
1168
+
1169bool Context::doesPrimitiveDataExist( const uint UUID, const char* label ) const{
1170 if( primitives.find(UUID) == primitives.end() ){
1171 helios_runtime_error("ERROR (Context::doesPrimitiveDataExist): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1172 }
1173 return primitives.at(UUID)->doesPrimitiveDataExist(label);
1174}
+
1175
+
1176void Context::clearPrimitiveData( const uint UUID, const char* label ){
1177 if( primitives.find(UUID) == primitives.end() ){
1178 helios_runtime_error("ERROR (Context::getPrimitiveData): UUID of " + std::to_string(UUID) + " does not exist in the Context.");
1179 }
1180 primitives.at(UUID)->clearPrimitiveData(label);
1181}
+
1182
+
1183void Context::clearPrimitiveData( const std::vector<uint>& UUIDs, const char* label ){
1184 for( unsigned int UUID : UUIDs){
1185 if( primitives.find(UUID) == primitives.end() ){
@@ -1268,7 +1423,9 @@
1188 primitives.at(UUID)->clearPrimitiveData(label);
1189 }
1190}
+
1191
+
1192void Context::copyPrimitiveData(uint sourceUUID, uint destinationUUID){
1193
1194 if(primitives.find(sourceUUID) == primitives.end() ) {
@@ -1292,7 +1449,9 @@
1212 primitives.at(destinationUUID)->primitive_data_string = primitives.at(sourceUUID)->primitive_data_string;
1213
1214}
+
1215
+
1216void Context::renamePrimitiveData( uint UUID, const char* old_label, const char* new_label ){
1217
1218 if( primitives.find(UUID) == primitives.end() ){
@@ -1305,7 +1464,9 @@
1225 clearPrimitiveData( UUID, old_label );
1226
1227}
+
1228
+
1229void Context::duplicatePrimitiveData( uint UUID, const char* old_label, const char* new_label ){
1230
1231 if( primitives.find(UUID) == primitives.end() ){
@@ -1344,11 +1505,15 @@
1264 }
1265
1266}
+
1267
+
1268std::vector<std::string> Context::listPrimitiveData(uint UUID) const{
1269 return getPrimitivePointer_private(UUID)->listPrimitiveData();
1270}
+
1271
+
1272void Context::duplicatePrimitiveData( const char* existing_data_label, const char* copy_data_label ){
1273
1274 for( auto &primitive : primitives){
@@ -1380,7 +1545,9 @@
1300 }
1301
1302}
+
1303
+
1304void Context::calculatePrimitiveDataMean( const std::vector<uint> &UUIDs, const std::string &label, float &mean ) const{
1305 float value;
1306 float sum = 0.f;
@@ -1403,7 +1570,9 @@
1323 }
1324
1325}
+
1326
+
1327void Context::calculatePrimitiveDataMean( const std::vector<uint> &UUIDs, const std::string &label, double &mean ) const{
1328 double value;
1329 double sum = 0.f;
@@ -1426,7 +1595,9 @@
1346 }
1347
1348}
+
1349
+
1350void Context::calculatePrimitiveDataMean( const std::vector<uint> &UUIDs, const std::string &label, helios::vec2 &mean ) const{
1351 vec2 value;
1352 vec2 sum(0.f,0.f);
@@ -1447,7 +1618,9 @@
1367 mean = sum / float(count);
1368 }
1369}
+
1370
+
1371void Context::calculatePrimitiveDataMean( const std::vector<uint> &UUIDs, const std::string &label, helios::vec3 &mean ) const{
1372 vec3 value;
1373 vec3 sum(0.f,0.f,0.f);
@@ -1468,7 +1641,9 @@
1388 mean = sum / float(count);
1389 }
1390}
+
1391
+
1392void Context::calculatePrimitiveDataMean( const std::vector<uint> &UUIDs, const std::string &label, helios::vec4 &mean ) const{
1393 vec4 value;
1394 vec4 sum(0.f,0.f,0.f,0.f);
@@ -1489,7 +1664,9 @@
1409 mean = sum / float(count);
1410 }
1411}
+
1412
+
1413void Context::calculatePrimitiveDataAreaWeightedMean( const std::vector<uint> &UUIDs, const std::string &label, float &awt_mean ) const{
1414 float value, A;
1415 float sum = 0.f;
@@ -1518,7 +1695,9 @@
1438 awt_mean = sum/area;
1439 }
1440}
+
1441
+
1442void Context::calculatePrimitiveDataAreaWeightedMean( const std::vector<uint> &UUIDs, const std::string &label, double &awt_mean ) const{
1443 double value;
1444 float A;
@@ -1548,7 +1727,9 @@
1468 awt_mean = sum/area;
1469 }
1470}
+
1471
+
1472void Context::calculatePrimitiveDataAreaWeightedMean( const std::vector<uint> &UUIDs, const std::string &label, helios::vec2 &awt_mean ) const{
1473 vec2 value;
1474 float A;
@@ -1578,7 +1759,9 @@
1498 awt_mean = sum/area;
1499 }
1500}
+
1501
+
1502void Context::calculatePrimitiveDataAreaWeightedMean( const std::vector<uint> &UUIDs, const std::string &label, helios::vec3 &awt_mean ) const{
1503 vec3 value;
1504 float A;
@@ -1608,7 +1791,9 @@
1528 awt_mean = sum/area;
1529 }
1530}
+
1531
+
1532void Context::calculatePrimitiveDataAreaWeightedMean( const std::vector<uint> &UUIDs, const std::string &label, helios::vec4 &awt_mean ) const{
1533 vec4 value;
1534 float A;
@@ -1638,7 +1823,9 @@
1558 awt_mean = sum/area;
1559 }
1560}
+
1561
+
1562void Context::calculatePrimitiveDataSum( const std::vector<uint> &UUIDs, const std::string &label, float &sum ) const{
1563
1564 float value;
@@ -1659,7 +1846,9 @@
1579 }
1580
1581}
+
1582
+
1583void Context::calculatePrimitiveDataSum( const std::vector<uint> &UUIDs, const std::string &label, double &sum ) const{
1584
1585 double value;
@@ -1680,7 +1869,9 @@
1600 }
1601
1602}
+
1603
+
1604void Context::calculatePrimitiveDataSum( const std::vector<uint> &UUIDs, const std::string &label, helios::vec2 &sum ) const{
1605
1606 vec2 value;
@@ -1701,7 +1892,9 @@
1621 }
1622
1623}
+
1624
+
1625void Context::calculatePrimitiveDataSum( const std::vector<uint> &UUIDs, const std::string &label, helios::vec3 &sum ) const{
1626
1627 vec3 value;
@@ -1722,7 +1915,9 @@
1642 }
1643
1644}
+
1645
+
1646void Context::calculatePrimitiveDataSum( const std::vector<uint> &UUIDs, const std::string &label, helios::vec4 &sum ) const{
1647
1648 vec4 value;
@@ -1743,7 +1938,9 @@
1663 }
1664
1665}
+
1666
+
1667void Context::calculatePrimitiveDataAreaWeightedSum( const std::vector<uint> &UUIDs, const std::string &label, float &awt_sum ) const{
1668
1669 float value;
@@ -1772,7 +1969,9 @@
1692 }
1693
1694}
+
1695
+
1696void Context::calculatePrimitiveDataAreaWeightedSum( const std::vector<uint> &UUIDs, const std::string &label, double &awt_sum ) const{
1697
1698 double value;
@@ -1801,7 +2000,9 @@
1721 }
1722
1723}
+
1724
+
1725void Context::calculatePrimitiveDataAreaWeightedSum( const std::vector<uint> &UUIDs, const std::string &label, helios::vec2 &awt_sum ) const{
1726
1727 vec2 value;
@@ -1830,7 +2031,9 @@
1750 }
1751
1752}
+
1753
+
1754void Context::calculatePrimitiveDataAreaWeightedSum( const std::vector<uint> &UUIDs, const std::string &label, helios::vec3 &awt_sum ) const{
1755
1756 vec3 value;
@@ -1859,7 +2062,9 @@
1779 }
1780
1781}
+
1782
+
1783void Context::calculatePrimitiveDataAreaWeightedSum( const std::vector<uint> &UUIDs, const std::string &label, helios::vec4 &awt_sum ) const{
1784
1785 vec4 value;
@@ -1888,7 +2093,9 @@
1808 }
1809
1810}
+
1811
+
1812void Context::scalePrimitiveData( const std::vector<uint> &UUIDs, const std::string &label, float scaling_factor ){
1813
1814 uint primitives_not_exist = 0;
@@ -1942,11 +2149,15 @@
1862 }
1863
1864}
+
1865
+
1866void Context::scalePrimitiveData( const std::string &label, float scaling_factor ) {
1867 scalePrimitiveData( getAllUUIDs(), label, scaling_factor );
1868}
+
1869
+
1870void Context::incrementPrimitiveData( const std::vector<uint> &UUIDs, const char* label, int increment ){
1871
1872 for( uint UUID : UUIDs ) {
@@ -1968,7 +2179,9 @@
1888 }
1889
1890}
+
1891
+
1892void Context::incrementPrimitiveData( const std::vector<uint> &UUIDs, const char* label, uint increment ){
1893
1894 for( uint UUID : UUIDs ) {
@@ -1990,7 +2203,9 @@
1910 }
1911
1912}
+
1913
+
1914void Context::incrementPrimitiveData( const std::vector<uint> &UUIDs, const char* label, float increment ){
1915
1916 for( uint UUID : UUIDs ) {
@@ -2012,7 +2227,9 @@
1932 }
1933
1934}
+
1935
+
1936void Context::incrementPrimitiveData( const std::vector<uint> &UUIDs, const char* label, double increment ){
1937
1938 for( uint UUID : UUIDs ) {
@@ -2034,7 +2251,9 @@
1954 }
1955
1956}
+
1957
+
1958void Context::aggregatePrimitiveDataSum( const std::vector<uint> &UUIDs, const std::vector<std::string> &primitive_data_labels, const std::string &result_primitive_data_label ){
1959
1960 uint primitives_not_exist = 0;
@@ -2166,7 +2385,9 @@
2086 }
2087
2088}
+
2089
+
2090void Context::aggregatePrimitiveDataProduct( const std::vector<uint> &UUIDs, const std::vector<std::string> &primitive_data_labels, const std::string &result_primitive_data_label ){
2091
2092 uint primitives_not_exist = 0;
@@ -2342,8 +2563,10 @@
2262 }
2263
2264}
+
2265
2266
+
2267float Context::sumPrimitiveSurfaceArea( const std::vector<uint> &UUIDs ) const{
2268
2269 bool primitive_warning = false;
@@ -2375,7 +2598,9 @@
2295 return area;
2296
2297}
+
2298
+
2299std::vector<uint> Context::filterPrimitivesByData( const std::vector<uint> &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator ){
2300
2301 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -2411,7 +2636,9 @@
2331 return UUIDs_out;
2332
2333}
+
2334
+
2335std::vector<uint> Context::filterPrimitivesByData( const std::vector<uint> &UUIDs, const std::string &primitive_data_label, double filter_value, const std::string &comparator ){
2336
2337 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -2447,7 +2674,9 @@
2367 return UUIDs_out;
2368
2369}
+
2370
+
2371std::vector<uint> Context::filterPrimitivesByData( const std::vector<uint> &UUIDs, const std::string &primitive_data_label, int filter_value, const std::string &comparator ){
2372
2373 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -2483,7 +2712,9 @@
2403 return UUIDs_out;
2404
2405}
+
2406
+
2407std::vector<uint> Context::filterPrimitivesByData( const std::vector<uint> &UUIDs, const std::string &primitive_data_label, uint filter_value, const std::string &comparator ){
2408
2409 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -2519,7 +2750,9 @@
2439 return UUIDs_out;
2440
2441}
+
2442
+
2443std::vector<uint> Context::filterPrimitivesByData( const std::vector<uint> &UUIDs, const std::string &primitive_data_label, const std::string &filter_value ){
2444
2445 std::vector<uint> UUIDs_out = UUIDs;
@@ -2541,159 +2774,207 @@
2461 return UUIDs_out;
2462
2463}
+
2464
2465//------ Object Data ------- //
2466
+
2467void Context::setObjectData( const uint objID, const char* label, const int& data ){
2468 if( objects.find(objID) == objects.end() ){
2469 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2470 }
2471 objects.at(objID)->setObjectData(label,data);
2472}
+
2473
+
2474void Context::setObjectData( const uint objID, const char* label, const uint& data ){
2475 if( objects.find(objID) == objects.end() ){
2476 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2477 }
2478 objects.at(objID)->setObjectData(label,data);
2479}
+
2480
+
2481void Context::setObjectData( const uint objID, const char* label, const float& data ){
2482 if( objects.find(objID) == objects.end() ){
2483 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2484 }
2485 objects.at(objID)->setObjectData(label,data);
2486}
+
2487
+
2488void Context::setObjectData( const uint objID, const char* label, const double& data ){
2489 if( objects.find(objID) == objects.end() ){
2490 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2491 }
2492 objects.at(objID)->setObjectData(label,data);
2493}
+
2494
+
2495void Context::setObjectData( const uint objID, const char* label, const helios::vec2& data ){
2496 if( objects.find(objID) == objects.end() ){
2497 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2498 }
2499 objects.at(objID)->setObjectData(label,data);
2500}
+
2501
+
2502void Context::setObjectData( const uint objID, const char* label, const helios::vec3& data ){
2503 if( objects.find(objID) == objects.end() ){
2504 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2505 }
2506 objects.at(objID)->setObjectData(label,data);
2507}
+
2508
+
2509void Context::setObjectData( const uint objID, const char* label, const helios::vec4& data ){
2510 if( objects.find(objID) == objects.end() ){
2511 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2512 }
2513 objects.at(objID)->setObjectData(label,data);
2514}
+
2515
+
2516void Context::setObjectData( const uint objID, const char* label, const helios::int2& data ){
2517 if( objects.find(objID) == objects.end() ){
2518 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2519 }
2520 objects.at(objID)->setObjectData(label,data);
2521}
+
2522
+
2523void Context::setObjectData( const uint objID, const char* label, const helios::int3& data ){
2524 if( objects.find(objID) == objects.end() ){
2525 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2526 }
2527 objects.at(objID)->setObjectData(label,data);
2528}
+
2529
+
2530void Context::setObjectData( const uint objID, const char* label, const helios::int4& data ){
2531 if( objects.find(objID) == objects.end() ){
2532 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2533 }
2534 objects.at(objID)->setObjectData(label,data);
2535}
+
2536
+
2537void Context::setObjectData( const uint objID, const char* label, const std::string& data ){
2538 if( objects.find(objID) == objects.end() ){
2539 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2540 }
2541 objects.at(objID)->setObjectData(label,data);
2542}
+
2543
+
2544void Context::setObjectData( const uint objID, const char* label, HeliosDataType type, uint size, void* data ){
2545 if( objects.find(objID) == objects.end() ){
2546 helios_runtime_error("ERROR (Context::setObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2547 }
2548 objects.at(objID)->setObjectData(label,type,size,data);
2549}
+
2550
+
2551void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const int& data ){
2552 for( uint objID : objIDs){
2553 setObjectData( objID, label, data );
2554 }
2555}
+
2556
+
2557void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const uint& data ){
2558 for( uint objID : objIDs){
2559 setObjectData( objID, label, data );
2560 }
2561}
+
2562
+
2563void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const float& data ){
2564 for( uint objID : objIDs){
2565 setObjectData( objID, label, data );
2566 }
2567}
+
2568
+
2569void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const double& data ){
2570 for( uint objID : objIDs){
2571 setObjectData( objID, label, data );
2572 }
2573}
+
2574
+
2575void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const helios::vec2& data ){
2576 for( uint objID : objIDs){
2577 setObjectData( objID, label, data );
2578 }
2579}
+
2580
+
2581void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const helios::vec3& data ){
2582 for(unsigned int objID : objIDs){
2583 setObjectData( objID, label, data );
2584 }
2585}
+
2586
+
2587void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const helios::vec4& data ){
2588 for( uint objID : objIDs){
2589 setObjectData( objID, label, data );
2590 }
2591}
+
2592
+
2593void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const helios::int2& data ){
2594 for( uint objID : objIDs){
2595 setObjectData( objID, label, data );
2596 }
2597}
+
2598
+
2599void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const helios::int3& data ){
2600 for( uint objID : objIDs){
2601 setObjectData( objID, label, data );
2602 }
2603}
+
2604
+
2605void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const helios::int4& data ){
2606 for( uint objID : objIDs){
2607 setObjectData( objID, label, data );
2608 }
2609}
+
2610
+
2611void Context::setObjectData( const std::vector<uint>& objIDs, const char* label, const std::string& data ){
2612 for( uint objID : objIDs){
2613 setObjectData( objID, label, data );
2614 }
2615}
+
2616
+
2617void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const int& data ){
2618 for( const auto & j : objIDs){
2619 for( const auto & objID : j ){
@@ -2701,7 +2982,9 @@
2621 }
2622 }
2623}
+
2624
+
2625void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const uint& data ){
2626 for( const auto & j : objIDs){
2627 for( const auto & objID : j ){
@@ -2709,7 +2992,9 @@
2629 }
2630 }
2631}
+
2632
+
2633void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const float& data ){
2634 for( const auto & j : objIDs){
2635 for( const auto & objID : j ){
@@ -2717,7 +3002,9 @@
2637 }
2638 }
2639}
+
2640
+
2641void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const double& data ){
2642 for( const auto & j : objIDs){
2643 for( const auto & objID : j ){
@@ -2725,7 +3012,9 @@
2645 }
2646 }
2647}
+
2648
+
2649void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const helios::vec2& data ){
2650 for( const auto & j : objIDs){
2651 for( const auto & objID : j ){
@@ -2733,7 +3022,9 @@
2653 }
2654 }
2655}
+
2656
+
2657void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const helios::vec3& data ){
2658 for( const auto & j : objIDs){
2659 for( const auto & objID : j ){
@@ -2741,7 +3032,9 @@
2661 }
2662 }
2663}
+
2664
+
2665void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const helios::vec4& data ){
2666 for( const auto & j : objIDs){
2667 for( const auto & objID : j ){
@@ -2749,7 +3042,9 @@
2669 }
2670 }
2671}
+
2672
+
2673void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const helios::int2& data ){
2674 for( const auto & j : objIDs){
2675 for( const auto & objID : j ){
@@ -2757,7 +3052,9 @@
2677 }
2678 }
2679}
+
2680
+
2681void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const helios::int3& data ){
2682 for( const auto & j : objIDs){
2683 for( const auto & objID : j ){
@@ -2765,7 +3062,9 @@
2685 }
2686 }
2687}
+
2688
+
2689void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const helios::int4& data ){
2690 for( const auto & j : objIDs){
2691 for( const auto & objID : j ){
@@ -2773,7 +3072,9 @@
2693 }
2694 }
2695}
+
2696
+
2697void Context::setObjectData( const std::vector<std::vector<uint> >& objIDs, const char* label, const std::string& data ){
2698 for( const auto & j : objIDs){
2699 for( const auto & objID : j ){
@@ -2781,7 +3082,9 @@
2701 }
2702 }
2703}
+
2704
+
2705void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const int& data ){
2706 for( const auto & j : objIDs){
2707 for( const auto & i : j ){
@@ -2791,7 +3094,9 @@
2711 }
2712 }
2713}
+
2714
+
2715void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const uint& data ){
2716 for( const auto & j : objIDs){
2717 for( const auto & i : j ){
@@ -2801,7 +3106,9 @@
2721 }
2722 }
2723}
+
2724
+
2725void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const float& data ){
2726 for( const auto & j : objIDs){
2727 for( const auto & i : j ){
@@ -2811,7 +3118,9 @@
2731 }
2732 }
2733}
+
2734
+
2735void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const double& data ){
2736 for( const auto & j : objIDs){
2737 for( const auto & i : j ){
@@ -2821,7 +3130,9 @@
2741 }
2742 }
2743}
+
2744
+
2745void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const helios::vec2& data ){
2746 for( const auto & j : objIDs){
2747 for( const auto & i : j ){
@@ -2831,7 +3142,9 @@
2751 }
2752 }
2753}
+
2754
+
2755void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const helios::vec3& data ){
2756 for( const auto & j : objIDs){
2757 for( const auto & i : j ){
@@ -2841,7 +3154,9 @@
2761 }
2762 }
2763}
+
2764
+
2765void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const helios::vec4& data ){
2766 for( const auto & j : objIDs){
2767 for( const auto & i : j ){
@@ -2851,7 +3166,9 @@
2771 }
2772 }
2773}
+
2774
+
2775void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const helios::int2& data ){
2776 for( const auto & j : objIDs){
2777 for( const auto & i : j ){
@@ -2861,7 +3178,9 @@
2781 }
2782 }
2783}
+
2784
+
2785void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const helios::int3& data ){
2786 for( const auto & j : objIDs){
2787 for( const auto & i : j ){
@@ -2871,7 +3190,9 @@
2791 }
2792 }
2793}
+
2794
+
2795void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const helios::int4& data ){
2796 for( const auto & j : objIDs){
2797 for( const auto & i : j ){
@@ -2881,7 +3202,9 @@
2801 }
2802 }
2803}
+
2804
+
2805void Context::setObjectData( const std::vector<std::vector<std::vector<uint> > >& objIDs, const char* label, const std::string& data ){
2806 for( const auto & j : objIDs){
2807 for( const auto & i : j ){
@@ -2891,182 +3214,234 @@
2811 }
2812 }
2813}
+
2814
+
2815void Context::getObjectData( const uint objID, const char* label, int& data ) const{
2816 if( objects.find(objID) == objects.end() ){
2817 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2818 }
2819 objects.at(objID)->getObjectData(label,data);
2820}
+
2821
+
2822void Context::getObjectData( const uint objID, const char* label, std::vector<int>& data ) const{
2823 if( objects.find(objID) == objects.end() ){
2824 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2825 }
2826 objects.at(objID)->getObjectData(label,data);
2827}
+
2828
+
2829void Context::getObjectData( const uint objID, const char* label, uint& data ) const{
2830 if( objects.find(objID) == objects.end() ){
2831 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2832 }
2833 objects.at(objID)->getObjectData(label,data);
2834}
+
2835
+
2836void Context::getObjectData( const uint objID, const char* label, std::vector<uint>& data ) const{
2837 if( objects.find(objID) == objects.end() ){
2838 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2839 }
2840 objects.at(objID)->getObjectData(label,data);
2841}
+
2842
+
2843void Context::getObjectData( const uint objID, const char* label, float& data ) const{
2844 if( objects.find(objID) == objects.end() ){
2845 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2846 }
2847 objects.at(objID)->getObjectData(label,data);
2848}
+
2849
+
2850void Context::getObjectData( const uint objID, const char* label, std::vector<float>& data ) const{
2851 if( objects.find(objID) == objects.end() ){
2852 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2853 }
2854 objects.at(objID)->getObjectData(label,data);
2855}
+
2856
+
2857void Context::getObjectData( const uint objID, const char* label, double& data ) const{
2858 if( objects.find(objID) == objects.end() ){
2859 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2860 }
2861 objects.at(objID)->getObjectData(label,data);
2862}
+
2863
+
2864void Context::getObjectData( const uint objID, const char* label, std::vector<double>& data ) const{
2865 if( objects.find(objID) == objects.end() ){
2866 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2867 }
2868 objects.at(objID)->getObjectData(label,data);
2869}
+
2870
+
2871void Context::getObjectData( const uint objID, const char* label, vec2& data ) const{
2872 if( objects.find(objID) == objects.end() ){
2873 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2874 }
2875 objects.at(objID)->getObjectData(label,data);
2876}
+
2877
+
2878void Context::getObjectData( const uint objID, const char* label, std::vector<vec2>& data ) const{
2879 if( objects.find(objID) == objects.end() ){
2880 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2881 }
2882 objects.at(objID)->getObjectData(label,data);
2883}
+
2884
+
2885void Context::getObjectData( const uint objID, const char* label, vec3& data ) const{
2886 if( objects.find(objID) == objects.end() ){
2887 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2888 }
2889 objects.at(objID)->getObjectData(label,data);
2890}
+
2891
+
2892void Context::getObjectData( const uint objID, const char* label, std::vector<vec3>& data ) const{
2893 if( objects.find(objID) == objects.end() ){
2894 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2895 }
2896 objects.at(objID)->getObjectData(label,data);
2897}
+
2898
+
2899void Context::getObjectData( const uint objID, const char* label, vec4& data ) const{
2900 if( objects.find(objID) == objects.end() ){
2901 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2902 }
2903 objects.at(objID)->getObjectData(label,data);
2904}
+
2905
+
2906void Context::getObjectData( const uint objID, const char* label, std::vector<vec4>& data ) const{
2907 if( objects.find(objID) == objects.end() ){
2908 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2909 }
2910 objects.at(objID)->getObjectData(label,data);
2911}
+
2912
+
2913void Context::getObjectData( const uint objID, const char* label, int2& data ) const{
2914 if( objects.find(objID) == objects.end() ){
2915 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2916 }
2917 objects.at(objID)->getObjectData(label,data);
2918}
+
2919
+
2920void Context::getObjectData( const uint objID, const char* label, std::vector<int2>& data ) const{
2921 if( objects.find(objID) == objects.end() ){
2922 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2923 }
2924 objects.at(objID)->getObjectData(label,data);
2925}
+
2926
+
2927void Context::getObjectData( const uint objID, const char* label, int3& data ) const{
2928 if( objects.find(objID) == objects.end() ){
2929 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2930 }
2931 objects.at(objID)->getObjectData(label,data);
2932}
+
2933
+
2934void Context::getObjectData( const uint objID, const char* label, std::vector<int3>& data ) const{
2935 if( objects.find(objID) == objects.end() ){
2936 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2937 }
2938 objects.at(objID)->getObjectData(label,data);
2939}
+
2940
+
2941void Context::getObjectData( const uint objID, const char* label, int4& data ) const{
2942 if( objects.find(objID) == objects.end() ){
2943 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2944 }
2945 objects.at(objID)->getObjectData(label,data);
2946}
+
2947
+
2948void Context::getObjectData( const uint objID, const char* label, std::vector<int4>& data ) const{
2949 if( objects.find(objID) == objects.end() ){
2950 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2951 }
2952 objects.at(objID)->getObjectData(label,data);
2953}
+
2954
+
2955void Context::getObjectData( const uint objID, const char* label, std::string& data ) const{
2956 if( objects.find(objID) == objects.end() ){
2957 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2958 }
2959 objects.at(objID)->getObjectData(label,data);
2960}
+
2961
+
2962void Context::getObjectData( const uint objID, const char* label, std::vector<std::string>& data ) const{
2963 if( objects.find(objID) == objects.end() ){
2964 helios_runtime_error("ERROR (Context::getObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
2965 }
2966 objects.at(objID)->getObjectData(label,data);
2967}
+
2968
+
2969HeliosDataType Context::getObjectDataType( const uint objID, const char* label )const{
2970 if( objects.find(objID) == objects.end() ){
2971 helios_runtime_error("ERROR (Context::getObjectDataType): objID of " + std::to_string(objID) + " does not exist in the Context.");
2972 }
2973 return objects.at(objID)->getObjectDataType(label);
2974}
+
2975
+
2976uint Context::getObjectDataSize( const uint objID, const char* label )const{
2977 if( objects.find(objID) == objects.end() ){
2978 helios_runtime_error("ERROR (Context::getObjectDataSize): objID of " + std::to_string(objID) + " does not exist in the Context.");
2979 }
2980 return objects.at(objID)->getObjectDataSize(label);
2981}
+
2982
+
2983bool Context::doesObjectDataExist( const uint objID, const char* label ) const{
2984 if( objects.find(objID) == objects.end() ){
2985 helios_runtime_error("ERROR (Context::doesObjectDataExist): objID of " + std::to_string(objID) + " does not exist in the Context.");
2986 }
2987 return objects.at(objID)->doesObjectDataExist(label);
2988}
+
2989
+
2990void Context::copyObjectData(uint source_objID, uint destination_objID){
2991
2992 if( objects.find(source_objID) == objects.end() ) {
@@ -3090,7 +3465,9 @@
3010 objects.at(destination_objID)->object_data_string = objects.at(source_objID)->object_data_string;
3011
3012}
+
3013
+
3014void Context::duplicateObjectData( uint objID, const char* old_label, const char* new_label ){
3015
3016 if( objects.find(objID) == objects.end() ){
@@ -3129,8 +3506,10 @@
3049 }
3050
3051}
+
3052
3053
+
3054void Context::renameObjectData( uint objID, const char* old_label, const char* new_label ){
3055
3056 if( objects.find(objID) == objects.end() ){
@@ -3143,14 +3522,18 @@
3063 clearObjectData( objID, old_label );
3064
3065}
+
3066
+
3067void Context::clearObjectData( const uint objID, const char* label ){
3068 if( objects.find(objID) == objects.end() ){
3069 helios_runtime_error("ERROR (Context::clearObjectData): objID of " + std::to_string(objID) + " does not exist in the Context.");
3070 }
3071 objects.at(objID)->clearObjectData(label);
3072}
+
3073
+
3074void Context::clearObjectData( const std::vector<uint>& objIDs, const char* label ){
3075 for( uint objID : objIDs ){
3076 if( objects.find(objID) == objects.end() ){
@@ -3159,66 +3542,92 @@
3079 objects.at(objID)->clearObjectData(label);
3080 }
3081}
+
3082
+
3083std::vector<std::string> Context::listObjectData(uint ObjID) const{
3084 return getObjectPointer_private(ObjID)->listObjectData();
3085}
+
3086
+
3087void CompoundObject::setObjectData( const char* label, const int& data ){
3088 object_data_int[label] = {data};
3089 object_data_types[label] = HELIOS_TYPE_INT;
3090}
+
3091
+
3092void CompoundObject::setObjectData( const char* label, const uint& data ){
3093 object_data_uint[label] = {data};
3094 object_data_types[label] = HELIOS_TYPE_UINT;
3095}
+
3096
+
3097void CompoundObject::setObjectData( const char* label, const float& data ){
3098 object_data_float[label] = {data};
3099 object_data_types[label] = HELIOS_TYPE_FLOAT;
3100}
+
3101
+
3102void CompoundObject::setObjectData( const char* label, const double& data ){
3103 object_data_double[label] = {data};
3104 object_data_types[label] = HELIOS_TYPE_DOUBLE;
3105}
+
3106
+
3107void CompoundObject::setObjectData( const char* label, const helios::vec2& data ){
3108 object_data_vec2[label] = {data};
3109 object_data_types[label] = HELIOS_TYPE_VEC2;
3110}
+
3111
+
3112void CompoundObject::setObjectData( const char* label, const helios::vec3& data ){
3113 object_data_vec3[label] = {data};
3114 object_data_types[label] = HELIOS_TYPE_VEC3;
3115}
+
3116
+
3117void CompoundObject::setObjectData( const char* label, const helios::vec4& data ){
3118 object_data_vec4[label] = {data};
3119 object_data_types[label] = HELIOS_TYPE_VEC4;
3120}
+
3121
+
3122void CompoundObject::setObjectData( const char* label, const helios::int2& data ){
3123 object_data_int2[label] = {data};
3124 object_data_types[label] = HELIOS_TYPE_INT2;
3125}
+
3126
+
3127void CompoundObject::setObjectData( const char* label, const helios::int3& data ){
3128 object_data_int3[label] = {data};
3129 object_data_types[label] = HELIOS_TYPE_INT3;
3130}
+
3131
+
3132void CompoundObject::setObjectData( const char* label, const helios::int4& data ){
3133 object_data_int4[label] = {data};
3134 object_data_types[label] = HELIOS_TYPE_INT4;
3135}
+
3136
+
3137void CompoundObject::setObjectData( const char* label, const std::string& data ){
3138 object_data_string[label] = {data};
3139 object_data_types[label] = HELIOS_TYPE_STRING;
3140}
+
3141
+
3142void CompoundObject::setObjectData( const char* label, HeliosDataType a_type, uint size, void* data ){
3143
3144 object_data_types[label] = a_type;
@@ -3325,7 +3734,9 @@
3245 }
3246
3247}
+
3248
+
3249void CompoundObject::getObjectData( const char* label, int& data ) const{
3250
3251 if( !doesObjectDataExist( label ) ){
@@ -3339,7 +3750,9 @@
3259 }
3260
3261}
+
3262
+
3263void CompoundObject::getObjectData( const char* label, std::vector<int>& data ) const{
3264
3265 if( !doesObjectDataExist( label ) ){
@@ -3353,7 +3766,9 @@
3273 }
3274
3275}
+
3276
+
3277void CompoundObject::getObjectData( const char* label, uint& data ) const{
3278
3279 if( !doesObjectDataExist( label ) ){
@@ -3367,7 +3782,9 @@
3287 }
3288
3289}
+
3290
+
3291void CompoundObject::getObjectData( const char* label, std::vector<uint>& data ) const{
3292
3293 if( !doesObjectDataExist( label ) ){
@@ -3381,7 +3798,9 @@
3301 }
3302
3303}
+
3304
+
3305void CompoundObject::getObjectData( const char* label, float& data ) const{
3306
3307 if( !doesObjectDataExist( label ) ){
@@ -3395,7 +3814,9 @@
3315 }
3316
3317}
+
3318
+
3319void CompoundObject::getObjectData( const char* label, std::vector<float>& data ) const{
3320
3321 if( !doesObjectDataExist( label ) ){
@@ -3409,7 +3830,9 @@
3329 }
3330
3331}
+
3332
+
3333void CompoundObject::getObjectData( const char* label, double& data ) const{
3334
3335 if( !doesObjectDataExist( label ) ){
@@ -3423,7 +3846,9 @@
3343 }
3344
3345}
+
3346
+
3347void CompoundObject::getObjectData( const char* label, std::vector<double>& data ) const{
3348
3349 if( !doesObjectDataExist( label ) ){
@@ -3437,7 +3862,9 @@
3357 }
3358
3359}
+
3360
+
3361void CompoundObject::getObjectData( const char* label, vec2& data ) const{
3362
3363 if( !doesObjectDataExist( label ) ){
@@ -3451,7 +3878,9 @@
3371 }
3372
3373}
+
3374
+
3375void CompoundObject::getObjectData( const char* label, std::vector<vec2>& data ) const{
3376
3377 if( !doesObjectDataExist( label ) ){
@@ -3465,7 +3894,9 @@
3385 }
3386
3387}
+
3388
+
3389void CompoundObject::getObjectData( const char* label, vec3& data ) const{
3390
3391 if( !doesObjectDataExist( label ) ){
@@ -3479,7 +3910,9 @@
3399 }
3400
3401}
+
3402
+
3403void CompoundObject::getObjectData( const char* label, std::vector<vec3>& data ) const{
3404
3405 if( !doesObjectDataExist( label ) ){
@@ -3493,7 +3926,9 @@
3413 }
3414
3415}
+
3416
+
3417void CompoundObject::getObjectData( const char* label, vec4& data ) const{
3418
3419 if( !doesObjectDataExist( label ) ){
@@ -3507,7 +3942,9 @@
3427 }
3428
3429}
+
3430
+
3431void CompoundObject::getObjectData( const char* label, std::vector<vec4>& data ) const{
3432
3433 if( !doesObjectDataExist( label ) ){
@@ -3521,7 +3958,9 @@
3441 }
3442
3443}
+
3444
+
3445void CompoundObject::getObjectData( const char* label, int2& data ) const{
3446
3447 if( !doesObjectDataExist( label ) ){
@@ -3535,7 +3974,9 @@
3455 }
3456
3457}
+
3458
+
3459void CompoundObject::getObjectData( const char* label, std::vector<int2>& data ) const{
3460
3461 if( !doesObjectDataExist( label ) ){
@@ -3549,7 +3990,9 @@
3469 }
3470
3471}
+
3472
+
3473void CompoundObject::getObjectData( const char* label, int3& data ) const{
3474
3475 if( !doesObjectDataExist( label ) ){
@@ -3563,7 +4006,9 @@
3483 }
3484
3485}
+
3486
+
3487void CompoundObject::getObjectData( const char* label, std::vector<int3>& data ) const{
3488
3489 if( !doesObjectDataExist( label ) ){
@@ -3577,7 +4022,9 @@
3497 }
3498
3499}
+
3500
+
3501void CompoundObject::getObjectData( const char* label, int4& data ) const{
3502
3503 if( !doesObjectDataExist( label ) ){
@@ -3591,7 +4038,9 @@
3511 }
3512
3513}
+
3514
+
3515void CompoundObject::getObjectData( const char* label, std::vector<int4>& data ) const{
3516
3517 if( !doesObjectDataExist( label ) ){
@@ -3605,7 +4054,9 @@
3525 }
3526
3527}
+
3528
+
3529void CompoundObject::getObjectData( const char* label, std::string& data ) const{
3530
3531 if( !doesObjectDataExist( label ) ){
@@ -3619,7 +4070,9 @@
3539 }
3540
3541}
+
3542
+
3543void CompoundObject::getObjectData( const char* label, std::vector<std::string>& data ) const{
3544
3545 if( !doesObjectDataExist( label ) ){
@@ -3633,7 +4086,9 @@
3553 }
3554
3555}
+
3556
+
3557HeliosDataType CompoundObject::getObjectDataType( const char* label ) const{
3558
3559 if( !doesObjectDataExist( label ) ){
@@ -3643,7 +4098,9 @@
3563 return object_data_types.at(label);
3564
3565}
+
3566
+
3567uint CompoundObject::getObjectDataSize( const char* label ) const{
3568
3569 if( !doesObjectDataExist( label ) ){
@@ -3681,7 +4138,9 @@
3601 return 0;
3602
3603}
+
3604
+
3605void CompoundObject::clearObjectData( const char* label ){
3606
3607 if( !doesObjectDataExist( label ) ){
@@ -3728,7 +4187,9 @@
3648 }
3649
3650}
+
3651
+
3652bool CompoundObject::doesObjectDataExist( const char* label ) const{
3653
3654 if( object_data_types.find(label) == object_data_types.end() ){
@@ -3738,7 +4199,9 @@
3658 }
3659
3660}
+
3661
+
3662std::vector<std::string> CompoundObject::listObjectData() const{
3663
3664 std::vector<std::string> labels(object_data_types.size());
@@ -3752,7 +4215,9 @@
3672 return labels;
3673
3674}
+
3675
+
3676std::vector<uint> Context::filterObjectsByData( const std::vector<uint> &objIDs, const std::string &object_data_label, float filter_value, const std::string &comparator ){
3677
3678 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -3788,7 +4253,9 @@
3708 return objIDs_out;
3709
3710}
+
3711
+
3712std::vector<uint> Context::filterObjectsByData( const std::vector<uint> &objIDs, const std::string &object_data_label, double filter_value, const std::string &comparator ){
3713
3714 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -3824,7 +4291,9 @@
3744 return objIDs_out;
3745
3746}
+
3747
+
3748std::vector<uint> Context::filterObjectsByData( const std::vector<uint> &objIDs, const std::string &object_data_label, int filter_value, const std::string &comparator ){
3749
3750 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -3860,7 +4329,9 @@
3780 return objIDs_out;
3781
3782}
+
3783
+
3784std::vector<uint> Context::filterObjectsByData( const std::vector<uint> &objIDs, const std::string &object_data_label, uint filter_value, const std::string &comparator ){
3785
3786 if( comparator!="==" && comparator!=">" && comparator!="<" && comparator!=">=" && comparator!="<=" ){
@@ -3896,7 +4367,9 @@
3816 return objIDs_out;
3817
3818}
+
3819
+
3820std::vector<uint> Context::filterObjectsByData( const std::vector<uint> &objIDs, const std::string &object_data_label, const std::string &filter_value ){
3821
3822 std::vector<uint> objIDs_out = objIDs;
@@ -3918,86 +4391,110 @@
3838 return objIDs_out;
3839
3840}
+
3841
3842// -------- Global Data ---------- //
3843
+
3844void Context::setGlobalData( const char* label, const int& data ){
3845 std::vector<int> vec{data};
3846 globaldata[label].type = HELIOS_TYPE_INT;
3847 globaldata[label].size = 1;
3848 globaldata[label].global_data_int = vec;
3849}
+
3850
+
3851void Context::setGlobalData( const char* label, const uint& data ){
3852 std::vector<uint> vec{data};
3853 globaldata[label].type = HELIOS_TYPE_UINT;
3854 globaldata[label].size = 1;
3855 globaldata[label].global_data_uint = vec;
3856}
+
3857
+
3858void Context::setGlobalData( const char* label, const float& data ){
3859 std::vector<float> vec{data};
3860 globaldata[label].type = HELIOS_TYPE_FLOAT;
3861 globaldata[label].size = 1;
3862 globaldata[label].global_data_float = vec;
3863}
+
3864
+
3865void Context::setGlobalData( const char* label, const double& data ){
3866 std::vector<double> vec{data};
3867 globaldata[label].type = HELIOS_TYPE_DOUBLE;
3868 globaldata[label].size = 1;
3869 globaldata[label].global_data_double = vec;
3870}
+
3871
+
3872void Context::setGlobalData( const char* label, const helios::vec2& data ){
3873 std::vector<vec2> vec{data};
3874 globaldata[label].type = HELIOS_TYPE_VEC2;
3875 globaldata[label].size = 1;
3876 globaldata[label].global_data_vec2 = vec;
3877}
+
3878
+
3879void Context::setGlobalData( const char* label, const helios::vec3& data ){
3880 std::vector<vec3> vec{data};
3881 globaldata[label].type = HELIOS_TYPE_VEC3;
3882 globaldata[label].size = 1;
3883 globaldata[label].global_data_vec3 = vec;
3884}
+
3885
+
3886void Context::setGlobalData( const char* label, const helios::vec4& data ){
3887 std::vector<vec4> vec{data};
3888 globaldata[label].type = HELIOS_TYPE_VEC4;
3889 globaldata[label].size = 1;
3890 globaldata[label].global_data_vec4 = vec;
3891}
+
3892
+
3893void Context::setGlobalData( const char* label, const helios::int2& data ){
3894 std::vector<int2> vec{data};
3895 globaldata[label].type = HELIOS_TYPE_INT2;
3896 globaldata[label].size = 1;
3897 globaldata[label].global_data_int2 = vec;
3898}
+
3899
+
3900void Context::setGlobalData( const char* label, const helios::int3& data ){
3901 std::vector<int3> vec{data};
3902 globaldata[label].type = HELIOS_TYPE_INT3;
3903 globaldata[label].size = 1;
3904 globaldata[label].global_data_int3 = vec;
3905}
+
3906
+
3907void Context::setGlobalData( const char* label, const helios::int4& data ){
3908 std::vector<int4> vec{data};
3909 globaldata[label].type = HELIOS_TYPE_INT4;
3910 globaldata[label].size = 1;
3911 globaldata[label].global_data_int4 = vec;
3912}
+
3913
+
3914void Context::setGlobalData( const char* label, const std::string& data ){
3915 std::vector<std::string> vec{data};
3916 globaldata[label].type = HELIOS_TYPE_STRING;
3917 globaldata[label].size = 1;
3918 globaldata[label].global_data_string = vec;
3919}
+
3920
+
3921void Context::setGlobalData( const char* label, HeliosDataType type, size_t size, void* data ){
3922
3923 globaldata[label].type = type;
@@ -4127,7 +4624,9 @@
4047 }
4048
4049}
+
4050
+
4051void Context::renameGlobalData( const char* old_label, const char* new_label ){
4052
4053 if( !doesGlobalDataExist( old_label ) ){
@@ -4138,7 +4637,9 @@
4058 clearGlobalData( old_label );
4059
4060}
+
4061
+
4062void Context::duplicateGlobalData(const char* old_label, const char* new_label ){
4063
4064 if( !doesGlobalDataExist( old_label ) ){
@@ -4196,7 +4697,9 @@
4116 }
4117
4118}
+
4119
+
4120void Context::clearGlobalData( const char* label ){
4121
4122 if(doesGlobalDataExist(label)){
@@ -4204,7 +4707,9 @@
4124 }
4125
4126}
+
4127
+
4128void Context::getGlobalData( const char* label, int& data ) const{
4129
4130 if( !doesGlobalDataExist( label ) ){
@@ -4221,7 +4726,9 @@
4141 }
4142
4143}
+
4144
+
4145void Context::getGlobalData( const char* label, std::vector<int>& data ) const{
4146
4147 if( !doesGlobalDataExist( label ) ){
@@ -4238,7 +4745,9 @@
4158 }
4159
4160}
+
4161
+
4162void Context::getGlobalData( const char* label, uint& data ) const{
4163
4164 if( !doesGlobalDataExist( label ) ){
@@ -4255,7 +4764,9 @@
4175 }
4176
4177}
+
4178
+
4179void Context::getGlobalData( const char* label, std::vector<uint>& data ) const{
4180
4181 if( !doesGlobalDataExist( label ) ){
@@ -4272,7 +4783,9 @@
4192 }
4193
4194}
+
4195
+
4196void Context::getGlobalData( const char* label, float& data ) const{
4197
4198 if( !doesGlobalDataExist( label ) ){
@@ -4289,7 +4802,9 @@
4209 }
4210
4211}
+
4212
+
4213void Context::getGlobalData( const char* label, std::vector<float>& data ) const{
4214
4215 if( !doesGlobalDataExist( label ) ){
@@ -4306,7 +4821,9 @@
4226 }
4227
4228}
+
4229
+
4230void Context::getGlobalData( const char* label, double& data ) const{
4231
4232 if( !doesGlobalDataExist( label ) ){
@@ -4323,7 +4840,9 @@
4243 }
4244
4245}
+
4246
+
4247void Context::getGlobalData( const char* label, std::vector<double>& data ) const{
4248
4249 if( !doesGlobalDataExist( label ) ){
@@ -4340,7 +4859,9 @@
4260 }
4261
4262}
+
4263
+
4264void Context::getGlobalData( const char* label, helios::vec2& data ) const{
4265
4266 if( !doesGlobalDataExist( label ) ){
@@ -4357,7 +4878,9 @@
4277 }
4278
4279}
+
4280
+
4281void Context::getGlobalData( const char* label, std::vector<helios::vec2>& data ) const{
4282
4283 if( !doesGlobalDataExist( label ) ){
@@ -4374,7 +4897,9 @@
4294 }
4295
4296}
+
4297
+
4298void Context::getGlobalData( const char* label, helios::vec3& data ) const{
4299
4300 if( !doesGlobalDataExist( label ) ){
@@ -4391,7 +4916,9 @@
4311 }
4312
4313}
+
4314
+
4315void Context::getGlobalData( const char* label, std::vector<helios::vec3>& data ) const{
4316
4317 if( !doesGlobalDataExist( label ) ){
@@ -4408,7 +4935,9 @@
4328 }
4329
4330}
+
4331
+
4332void Context::getGlobalData( const char* label, helios::vec4& data ) const{
4333
4334 if( !doesGlobalDataExist( label ) ){
@@ -4425,7 +4954,9 @@
4345 }
4346
4347}
+
4348
+
4349void Context::getGlobalData( const char* label, std::vector<helios::vec4>& data ) const{
4350
4351 if( !doesGlobalDataExist( label ) ){
@@ -4442,7 +4973,9 @@
4362 }
4363
4364}
+
4365
+
4366void Context::getGlobalData( const char* label, helios::int2& data ) const{
4367
4368 if( !doesGlobalDataExist( label ) ){
@@ -4459,7 +4992,9 @@
4379 }
4380
4381}
+
4382
+
4383void Context::getGlobalData( const char* label, std::vector<helios::int2>& data ) const{
4384
4385 if( !doesGlobalDataExist( label ) ){
@@ -4476,7 +5011,9 @@
4396 }
4397
4398}
+
4399
+
4400void Context::getGlobalData( const char* label, helios::int3& data ) const{
4401
4402 if( !doesGlobalDataExist( label ) ){
@@ -4493,7 +5030,9 @@
4413 }
4414
4415}
+
4416
+
4417void Context::getGlobalData( const char* label, std::vector<helios::int3>& data ) const{
4418
4419 if( !doesGlobalDataExist( label ) ){
@@ -4510,7 +5049,9 @@
4430 }
4431
4432}
+
4433
+
4434void Context::getGlobalData( const char* label, helios::int4& data ) const{
4435
4436 if( !doesGlobalDataExist( label ) ){
@@ -4527,7 +5068,9 @@
4447 }
4448
4449}
+
4450
+
4451void Context::getGlobalData( const char* label, std::vector<helios::int4>& data ) const{
4452
4453 if( !doesGlobalDataExist( label ) ){
@@ -4544,7 +5087,9 @@
4464 }
4465
4466}
+
4467
+
4468void Context::getGlobalData( const char* label, std::string& data ) const{
4469
4470 if( !doesGlobalDataExist( label ) ){
@@ -4561,7 +5106,9 @@
4481 }
4482
4483}
+
4484
+
4485void Context::getGlobalData( const char* label, std::vector<std::string>& data ) const{
4486
4487 if( !doesGlobalDataExist( label ) ){
@@ -4578,7 +5125,9 @@
4498 }
4499
4500}
+
4501
+
4502HeliosDataType Context::getGlobalDataType( const char* label ) const{
4503
4504 if( !doesGlobalDataExist( label ) ){
@@ -4588,7 +5137,9 @@
4508 return globaldata.at(label).type;
4509
4510}
+
4511
+
4512size_t Context::getGlobalDataSize(const char *label) const {
4513
4514 if( !doesGlobalDataExist( label ) ){
@@ -4598,7 +5149,9 @@
4518 return globaldata.at(label).size;
4519
4520}
+
4521
+
4522std::vector<std::string> Context::listGlobalData() const{
4523
4524 std::vector<std::string> labels;
@@ -4609,7 +5162,9 @@
4529
4530 return labels;
4531}
+
4532
+
4533bool Context::doesGlobalDataExist( const char* label ) const{
4534
4535 if( globaldata.find(label) == globaldata.end() ){
@@ -4619,7 +5174,9 @@
4539 }
4540
4541}
+
4542
+
4543void Context::incrementGlobalData( const char* label, int increment ){
4544
4545 if( !doesGlobalDataExist( label ) ){
@@ -4637,7 +5194,9 @@
4557 }
4558
4559}
+
4560
+
4561void Context::incrementGlobalData( const char* label, uint increment ){
4562
4563 if( !doesGlobalDataExist( label ) ){
@@ -4655,7 +5214,9 @@
4575 }
4576
4577}
+
4578
+
4579void Context::incrementGlobalData( const char* label, float increment ){
4580
4581 if( !doesGlobalDataExist( label ) ){
@@ -4673,7 +5234,9 @@
4593 }
4594
4595}
+
4596
+
4597void Context::incrementGlobalData( const char* label, double increment ){
4598
4599 if( !doesGlobalDataExist( label ) ){
@@ -4691,108 +5254,110 @@
4611 }
4612
4613}
+
-
helios::HeliosDataType
HeliosDataType
Data types.
Definition: Context.h:41
-
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition: Context.h:59
-
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition: Context.h:49
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
-
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition: Context.h:43
-
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition: Context.h:63
-
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition: Context.h:53
-
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition: Context.h:61
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition: Context.h:57
-
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition: Context.h:55
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
-
helios::CompoundObject::getObjectDataSize
uint getObjectDataSize(const char *label) const
Get the size/length of object data.
Definition: Context_data.cpp:3567
-
helios::CompoundObject::listObjectData
std::vector< std::string > listObjectData() const
Return labels for all object data for this particular object.
Definition: Context_data.cpp:3662
-
helios::CompoundObject::doesObjectDataExist
bool doesObjectDataExist(const char *label) const
Check if object data 'label' exists.
Definition: Context_data.cpp:3652
-
helios::CompoundObject::getObjectDataType
HeliosDataType getObjectDataType(const char *label) const
Get the Helios data type of object data.
Definition: Context_data.cpp:3557
-
helios::CompoundObject::clearObjectData
void clearObjectData(const char *label)
Clear the object data for this object.
Definition: Context_data.cpp:3605
-
helios::CompoundObject::getObjectData
void getObjectData(const char *label, int &data) const
Get data associated with a object element (integer scalar)
Definition: Context_data.cpp:3249
-
helios::CompoundObject::setObjectData
void setObjectData(const char *label, const int &data)
Add data value (int) associated with a object element.
Definition: Context_data.cpp:3087
-
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition: Context_data.cpp:1192
-
helios::Context::scalePrimitiveData
void scalePrimitiveData(const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
Multiply primitive data values by a constant scaling factor for a subset of primitives.
Definition: Context_data.cpp:1812
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:2983
-
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition: Context_data.cpp:2815
-
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition: Context_data.cpp:2299
-
helios::Context::getPrimitiveDataSize
uint getPrimitiveDataSize(uint UUID, const char *label) const
Get the size/length of primitive data.
Definition: Context_data.cpp:1162
-
helios::Context::calculatePrimitiveDataSum
void calculatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
Calculate sum of primitive data values (float) for a subset of primitives.
Definition: Context_data.cpp:1562
-
helios::Context::incrementPrimitiveData
void incrementPrimitiveData(const std::vector< uint > &UUIDs, const char *label, int increment)
Increase value of primitive data (int) by some value.
Definition: Context_data.cpp:1870
-
helios::Context::renamePrimitiveData
void renamePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Rename primitive data for a primitive.
Definition: Context_data.cpp:1216
-
helios::Context::duplicateObjectData
void duplicateObjectData(uint objID, const char *old_label, const char *new_label)
Duplicate/copy existing object data.
Definition: Context_data.cpp:3014
-
helios::Context::filterObjectsByData
std::vector< uint > filterObjectsByData(const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
Get a vector of object IDs that meet filtering criteria based on object data.
Definition: Context.cpp:2750
-
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition: Context_data.cpp:4533
-
helios::Context::aggregatePrimitiveDataProduct
void aggregatePrimitiveDataProduct(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Multiply primitive data values for each primitive together and store result in new primitive data.
Definition: Context_data.cpp:2090
-
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition: Context_data.cpp:2467
-
helios::Context::clearObjectData
void clearObjectData(uint objID, const char *label)
Clear primitive data for a single primitive based on its objID.
Definition: Context_data.cpp:3067
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::listPrimitiveData
std::vector< std::string > listPrimitiveData(uint UUID) const
Return labels for all primitive data for this particular primitive.
Definition: Context_data.cpp:1268
-
helios::Context::renameGlobalData
void renameGlobalData(const char *old_label, const char *new_label)
Rename global data.
Definition: Context_data.cpp:4051
-
helios::Context::duplicatePrimitiveData
void duplicatePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Duplicate/copy primitive data.
Definition: Context_data.cpp:1229
-
helios::Context::calculatePrimitiveDataMean
void calculatePrimitiveDataMean(const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
Calculate mean of primitive data values (float) for a subset of primitives.
Definition: Context_data.cpp:1304
-
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition: Context_data.cpp:4502
-
helios::Context::getGlobalDataSize
size_t getGlobalDataSize(const char *label) const
Get the size/length of global data.
Definition: Context_data.cpp:4512
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::clearGlobalData
void clearGlobalData(const char *label)
Delete/clear global data.
Definition: Context_data.cpp:4120
-
helios::Context::renameObjectData
void renameObjectData(uint objID, const char *old_label, const char *new_label)
Rename existing object data.
Definition: Context_data.cpp:3054
-
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition: Context_data.cpp:3844
-
helios::Context::aggregatePrimitiveDataSum
void aggregatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Sum multiple primitive data values for each primitive together and store result in new primitive data...
Definition: Context_data.cpp:1958
-
helios::Context::getObjectDataSize
uint getObjectDataSize(uint objID, const char *label) const
Get the size/length of primitive data.
Definition: Context_data.cpp:2976
-
helios::Context::calculatePrimitiveDataAreaWeightedSum
void calculatePrimitiveDataAreaWeightedSum(const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
Calculate sum of primitive data values (float) for a subset of primitives, where each value in the su...
Definition: Context_data.cpp:1667
-
helios::Context::incrementGlobalData
void incrementGlobalData(const char *label, int increment)
Increase value of global data (int) by some value.
Definition: Context_data.cpp:4543
-
helios::Context::clearPrimitiveData
void clearPrimitiveData(uint UUID, const char *label)
Clear primitive data for a single primitive based on its UUID.
Definition: Context_data.cpp:1176
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::calculatePrimitiveDataAreaWeightedMean
void calculatePrimitiveDataAreaWeightedMean(const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
Calculate mean of primitive data values (float) for a subset of primitives, where each value in the m...
Definition: Context_data.cpp:1413
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::listObjectData
std::vector< std::string > listObjectData(uint ObjID) const
Return labels for all object data for this particular object.
Definition: Context_data.cpp:3083
-
helios::Context::listGlobalData
std::vector< std::string > listGlobalData() const
List the labels for all global data in the Context.
Definition: Context_data.cpp:4522
-
helios::Context::copyObjectData
void copyObjectData(uint source_objID, uint destination_objID)
copy all object data from one compound object to another
Definition: Context_data.cpp:2990
-
helios::Context::duplicateGlobalData
void duplicateGlobalData(const char *old_label, const char *new_label)
Make a copy of global data.
Definition: Context_data.cpp:4062
-
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:2969
-
helios::Context::sumPrimitiveSurfaceArea
float sumPrimitiveSurfaceArea(const std::vector< uint > &UUIDs) const
Sum the one-sided surface area of a group of primitives.
Definition: Context_data.cpp:2267
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition: global.cpp:1069
-
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition: global.cpp:1084
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_vec4
vec4 make_vec4(float x, float y, float z, float w)
Make a vec4 from three floats.
Definition: helios_vector_types.h:763
-
helios::make_int4
int4 make_int4(int x, int y, int z, int w)
Make an int4 vector from three ints.
Definition: helios_vector_types.h:299
-
helios::GlobalData
Structure for Global Data Entities.
Definition: Context.h:102
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::int4
Vector of four elements of type 'int'.
Definition: helios_vector_types.h:243
-
helios::int4::x
int x
First element in vector.
Definition: helios_vector_types.h:247
-
helios::int4::z
int z
Third element in vector.
Definition: helios_vector_types.h:251
-
helios::int4::w
int w
Fourth element in vector.
Definition: helios_vector_types.h:253
-
helios::int4::y
int y
Second element in vector.
Definition: helios_vector_types.h:249
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec4
Vector of four elements of type 'float'.
Definition: helios_vector_types.h:673
-
helios::vec4::y
float y
Second element in vector.
Definition: helios_vector_types.h:679
-
helios::vec4::w
float w
Fourth element in vector.
Definition: helios_vector_types.h:683
-
helios::vec4::z
float z
Third element in vector.
Definition: helios_vector_types.h:681
-
helios::vec4::x
float x
First element in vector.
Definition: helios_vector_types.h:677
+
helios::HeliosDataType
HeliosDataType
Data types.
Definition Context.h:41
+
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition Context.h:59
+
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition Context.h:49
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
+
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition Context.h:43
+
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition Context.h:63
+
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition Context.h:53
+
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition Context.h:61
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition Context.h:57
+
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition Context.h:55
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
+
helios::CompoundObject::getObjectDataSize
uint getObjectDataSize(const char *label) const
Get the size/length of object data.
Definition Context_data.cpp:3567
+
helios::CompoundObject::listObjectData
std::vector< std::string > listObjectData() const
Return labels for all object data for this particular object.
Definition Context_data.cpp:3662
+
helios::CompoundObject::doesObjectDataExist
bool doesObjectDataExist(const char *label) const
Check if object data 'label' exists.
Definition Context_data.cpp:3652
+
helios::CompoundObject::getObjectDataType
HeliosDataType getObjectDataType(const char *label) const
Get the Helios data type of object data.
Definition Context_data.cpp:3557
+
helios::CompoundObject::clearObjectData
void clearObjectData(const char *label)
Clear the object data for this object.
Definition Context_data.cpp:3605
+
helios::CompoundObject::getObjectData
void getObjectData(const char *label, int &data) const
Get data associated with a object element (integer scalar)
Definition Context_data.cpp:3249
+
helios::CompoundObject::setObjectData
void setObjectData(const char *label, const int &data)
Add data value (int) associated with a object element.
Definition Context_data.cpp:3087
+
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition Context_data.cpp:1192
+
helios::Context::scalePrimitiveData
void scalePrimitiveData(const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
Multiply primitive data values by a constant scaling factor for a subset of primitives.
Definition Context_data.cpp:1812
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:2983
+
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition Context_data.cpp:2815
+
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition Context_data.cpp:2299
+
helios::Context::getPrimitiveDataSize
uint getPrimitiveDataSize(uint UUID, const char *label) const
Get the size/length of primitive data.
Definition Context_data.cpp:1162
+
helios::Context::calculatePrimitiveDataSum
void calculatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
Calculate sum of primitive data values (float) for a subset of primitives.
Definition Context_data.cpp:1562
+
helios::Context::incrementPrimitiveData
void incrementPrimitiveData(const std::vector< uint > &UUIDs, const char *label, int increment)
Increase value of primitive data (int) by some value.
Definition Context_data.cpp:1870
+
helios::Context::renamePrimitiveData
void renamePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Rename primitive data for a primitive.
Definition Context_data.cpp:1216
+
helios::Context::duplicateObjectData
void duplicateObjectData(uint objID, const char *old_label, const char *new_label)
Duplicate/copy existing object data.
Definition Context_data.cpp:3014
+
helios::Context::filterObjectsByData
std::vector< uint > filterObjectsByData(const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
Get a vector of object IDs that meet filtering criteria based on object data.
Definition Context.cpp:2750
+
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition Context_data.cpp:4533
+
helios::Context::aggregatePrimitiveDataProduct
void aggregatePrimitiveDataProduct(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Multiply primitive data values for each primitive together and store result in new primitive data.
Definition Context_data.cpp:2090
+
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition Context_data.cpp:2467
+
helios::Context::clearObjectData
void clearObjectData(uint objID, const char *label)
Clear primitive data for a single primitive based on its objID.
Definition Context_data.cpp:3067
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::listPrimitiveData
std::vector< std::string > listPrimitiveData(uint UUID) const
Return labels for all primitive data for this particular primitive.
Definition Context_data.cpp:1268
+
helios::Context::renameGlobalData
void renameGlobalData(const char *old_label, const char *new_label)
Rename global data.
Definition Context_data.cpp:4051
+
helios::Context::duplicatePrimitiveData
void duplicatePrimitiveData(uint UUID, const char *old_label, const char *new_label)
Duplicate/copy primitive data.
Definition Context_data.cpp:1229
+
helios::Context::calculatePrimitiveDataMean
void calculatePrimitiveDataMean(const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
Calculate mean of primitive data values (float) for a subset of primitives.
Definition Context_data.cpp:1304
+
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition Context_data.cpp:4502
+
helios::Context::getGlobalDataSize
size_t getGlobalDataSize(const char *label) const
Get the size/length of global data.
Definition Context_data.cpp:4512
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::clearGlobalData
void clearGlobalData(const char *label)
Delete/clear global data.
Definition Context_data.cpp:4120
+
helios::Context::renameObjectData
void renameObjectData(uint objID, const char *old_label, const char *new_label)
Rename existing object data.
Definition Context_data.cpp:3054
+
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition Context_data.cpp:3844
+
helios::Context::aggregatePrimitiveDataSum
void aggregatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Sum multiple primitive data values for each primitive together and store result in new primitive data...
Definition Context_data.cpp:1958
+
helios::Context::getObjectDataSize
uint getObjectDataSize(uint objID, const char *label) const
Get the size/length of primitive data.
Definition Context_data.cpp:2976
+
helios::Context::calculatePrimitiveDataAreaWeightedSum
void calculatePrimitiveDataAreaWeightedSum(const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
Calculate sum of primitive data values (float) for a subset of primitives, where each value in the su...
Definition Context_data.cpp:1667
+
helios::Context::incrementGlobalData
void incrementGlobalData(const char *label, int increment)
Increase value of global data (int) by some value.
Definition Context_data.cpp:4543
+
helios::Context::clearPrimitiveData
void clearPrimitiveData(uint UUID, const char *label)
Clear primitive data for a single primitive based on its UUID.
Definition Context_data.cpp:1176
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::calculatePrimitiveDataAreaWeightedMean
void calculatePrimitiveDataAreaWeightedMean(const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
Calculate mean of primitive data values (float) for a subset of primitives, where each value in the m...
Definition Context_data.cpp:1413
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::listObjectData
std::vector< std::string > listObjectData(uint ObjID) const
Return labels for all object data for this particular object.
Definition Context_data.cpp:3083
+
helios::Context::listGlobalData
std::vector< std::string > listGlobalData() const
List the labels for all global data in the Context.
Definition Context_data.cpp:4522
+
helios::Context::copyObjectData
void copyObjectData(uint source_objID, uint destination_objID)
copy all object data from one compound object to another
Definition Context_data.cpp:2990
+
helios::Context::duplicateGlobalData
void duplicateGlobalData(const char *old_label, const char *new_label)
Make a copy of global data.
Definition Context_data.cpp:4062
+
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:2969
+
helios::Context::sumPrimitiveSurfaceArea
float sumPrimitiveSurfaceArea(const std::vector< uint > &UUIDs) const
Sum the one-sided surface area of a group of primitives.
Definition Context_data.cpp:2267
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition global.cpp:1069
+
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition global.cpp:1084
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_vec4
vec4 make_vec4(float x, float y, float z, float w)
Make a vec4 from three floats.
Definition helios_vector_types.h:763
+
helios::make_int4
int4 make_int4(int x, int y, int z, int w)
Make an int4 vector from three ints.
Definition helios_vector_types.h:299
+
helios::GlobalData
Structure for Global Data Entities.
Definition Context.h:102
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::int4
Vector of four elements of type 'int'.
Definition helios_vector_types.h:243
+
helios::int4::x
int x
First element in vector.
Definition helios_vector_types.h:247
+
helios::int4::z
int z
Third element in vector.
Definition helios_vector_types.h:251
+
helios::int4::w
int w
Fourth element in vector.
Definition helios_vector_types.h:253
+
helios::int4::y
int y
Second element in vector.
Definition helios_vector_types.h:249
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec4
Vector of four elements of type 'float'.
Definition helios_vector_types.h:673
+
helios::vec4::y
float y
Second element in vector.
Definition helios_vector_types.h:679
+
helios::vec4::w
float w
Fourth element in vector.
Definition helios_vector_types.h:683
+
helios::vec4::z
float z
Third element in vector.
Definition helios_vector_types.h:681
+
helios::vec4::x
float x
First element in vector.
Definition helios_vector_types.h:677
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_context__file_i_o_8cpp.html b/doc/html/_context__file_i_o_8cpp.html index 9da21e8d3..0092b9bc6 100644 --- a/doc/html/_context__file_i_o_8cpp.html +++ b/doc/html/_context__file_i_o_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Context_fileIO.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_context__file_i_o_8cpp_source.html b/doc/html/_context__file_i_o_8cpp_source.html index 66c466362..779c8bf15 100644 --- a/doc/html/_context__file_i_o_8cpp_source.html +++ b/doc/html/_context__file_i_o_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Context_fileIO.cpp
@@ -97,6 +109,7 @@
17
18using namespace helios;
19
+
20int XMLparser::parse_data_float( const pugi::xml_node &node_data, std::vector<float> &data ){
21
22 std::string data_str = node_data.child_value();
@@ -119,7 +132,9 @@
39 return 0;
40
41}
+
42
+
43int XMLparser::parse_data_double( const pugi::xml_node &node_data, std::vector<double> &data ){
44
45 std::string data_str = node_data.child_value();
@@ -142,7 +157,9 @@
62 return 0;
63
64}
+
65
+
66int XMLparser::parse_data_int( const pugi::xml_node &node_data, std::vector<int> &data ){
67
68 std::string data_str = node_data.child_value();
@@ -165,7 +182,9 @@
85 return 0;
86
87}
+
88
+
89int XMLparser::parse_data_uint( const pugi::xml_node &node_data, std::vector<uint> &data ){
90
91 std::string data_str = node_data.child_value();
@@ -188,7 +207,9 @@
108 return 0;
109
110}
+
111
+
112int XMLparser::parse_data_string( const pugi::xml_node &node_data, std::vector<std::string> &data ){
113
114 std::string data_str = node_data.child_value();
@@ -206,7 +227,9 @@
126 return 0;
127
128}
+
129
+
130int XMLparser::parse_data_vec2( const pugi::xml_node &node_data, std::vector<vec2> &data ){
131
132 std::string data_str = node_data.child_value();
@@ -230,7 +253,9 @@
150 return 0;
151
152}
+
153
+
154int XMLparser::parse_data_vec3( const pugi::xml_node &node_data, std::vector<vec3> &data ){
155
156 std::string data_str = node_data.child_value();
@@ -256,7 +281,9 @@
176 return 0;
177
178}
+
179
+
180int XMLparser::parse_data_vec4( const pugi::xml_node &node_data, std::vector<vec4> &data ){
181
182 std::string data_str = node_data.child_value();
@@ -282,7 +309,9 @@
202 return 0;
203
204}
+
205
+
206int XMLparser::parse_data_int2( const pugi::xml_node &node_data, std::vector<int2> &data ){
207
208 std::string data_str = node_data.child_value();
@@ -306,7 +335,9 @@
226 return 0;
227
228}
+
229
+
230int XMLparser::parse_data_int3( const pugi::xml_node &node_data, std::vector<int3> &data ){
231
232 std::string data_str = node_data.child_value();
@@ -331,7 +362,9 @@
251 return 0;
252
253}
+
254
+
255int XMLparser::parse_data_int4( const pugi::xml_node &node_data, std::vector<int4> &data ){
256
257 std::string data_str = node_data.child_value();
@@ -357,7 +390,9 @@
277 return 0;
278
279}
+
280
+
281int XMLparser::parse_objID( const pugi::xml_node &node, uint &objID ){
282
283 pugi::xml_node objID_node = node.child("objID");
@@ -374,7 +409,9 @@
294 return 0;
295
296}
+
297
+
298int XMLparser::parse_transform( const pugi::xml_node &node, float (&transform)[16] ){
299
300 pugi::xml_node transform_node = node.child("transform");
@@ -403,7 +440,9 @@
323 return 0;
324
325}
+
326
+
327int XMLparser::parse_texture( const pugi::xml_node &node, std::string &texture ){
328
329 pugi::xml_node texture_node = node.child("texture");
@@ -417,7 +456,9 @@
337 }
338
339}
+
340
+
341int XMLparser::parse_textureUV( const pugi::xml_node &node, std::vector<vec2> &uvs ){
342
343 pugi::xml_node uv_node = node.child("textureUV");
@@ -441,7 +482,9 @@
361 return 0;
362
363}
+
364
+
365int XMLparser::parse_solid_fraction( const pugi::xml_node &node, float &solid_fraction ){
366
367 pugi::xml_node sfrac_node = node.child("solid_fraction");
@@ -456,7 +499,9 @@
376 return 0;
377
378}
+
379
+
380int XMLparser::parse_vertices( const pugi::xml_node &node, std::vector<float> &vertices ){
381
382 vertices.resize(12);
@@ -487,7 +532,9 @@
407 return 0;
408
409}
+
410
+
411int XMLparser::parse_subdivisions( const pugi::xml_node &node, uint &subdivisions ){
412
413 pugi::xml_node subdiv_node = node.child("subdivisions");
@@ -502,7 +549,9 @@
422 return 0;
423
424}
+
425
+
426int XMLparser::parse_subdivisions( const pugi::xml_node &node, int2 &subdivisions ){
427
428 pugi::xml_node subdiv_node = node.child("subdivisions");
@@ -521,7 +570,9 @@
441 return 0;
442
443}
+
444
+
445int XMLparser::parse_subdivisions( const pugi::xml_node &node, int3 &subdivisions ){
446
447 pugi::xml_node subdiv_node = node.child("subdivisions");
@@ -541,7 +592,9 @@
461 return 0;
462
463}
+
464
+
465int XMLparser::parse_nodes( const pugi::xml_node &node, std::vector<vec3> &nodes ){
466
467 pugi::xml_node node_data = node.child("nodes");
@@ -567,7 +620,9 @@
487 return 0;
488
489}
+
490
+
491int XMLparser::parse_radius( const pugi::xml_node &node, std::vector<float> &radius ){
492
493 pugi::xml_node node_data = node.child("radius");
@@ -591,6 +646,7 @@
511 return 0;
512
513}
+
514
515void Context::loadPData( pugi::xml_node p, uint UUID ){
516
@@ -1294,6 +1350,7 @@
1214
1215}
1216
+
1217std::vector<uint> Context::loadXML( const char* filename, bool quiet ){
1218
1219 if( !quiet ) {
@@ -2475,11 +2532,15 @@
2395 return UUID;
2396
2397}
+
2398
+
2399std::vector<std::string> Context::getLoadedXMLFiles() {
2400 return XMLfiles;
2401}
+
2402
+
2403bool Context::scanXMLForTag( const std::string &filename, const std::string &tag, const std::string &label ){
2404
2405 std::string fn = filename;
@@ -2519,6 +2580,7 @@
2439 return false;
2440
2441}
+
2442
2443void Context::writeDataToXMLstream( const char* data_group, const std::vector<std::string> &data_labels, void* ptr, std::ofstream &outfile ) const{
2444
@@ -2735,10 +2797,13 @@
2655
2656}
2657
+
2658void Context::writeXML( const char* filename, bool quiet ) const {
2659 writeXML(filename, getAllUUIDs(), quiet);
2660}
+
2661
+
2662void Context::writeXML_byobject( const char* filename, const std::vector<uint> &objIDs, bool quiet ) const {
2663 for( uint objID : objIDs ){
2664 if( !doesObjectExist(objID) ){
@@ -2747,7 +2812,9 @@
2667 }
2668 writeXML(filename, getObjectPrimitiveUUIDs(objIDs), quiet);
2669}
+
2670
+
2671void Context::writeXML( const char* filename, const std::vector<uint> &UUIDs, bool quiet ) const{
2672
2673 if( !quiet ) {
@@ -3454,23 +3521,33 @@
3374 std::cout << "done." << std::endl;
3375 }
3376}
+
3377
+
3378std::vector<uint> Context::loadPLY(const char* filename, bool silent ){
3379 return loadPLY( filename, nullorigin, 0, nullrotation, RGB::blue, "YUP", silent );
3380}
+
3381
+
3382std::vector<uint> Context::loadPLY(const char* filename, const vec3 &origin, float height, const std::string &upaxis, bool silent ){
3383 return loadPLY( filename, origin, height, make_SphericalCoord(0,0), RGB::blue, upaxis, silent );
3384}
+
3385
+
3386std::vector<uint> Context::loadPLY(const char* filename, const vec3 &origin, float height, const SphericalCoord &rotation, const std::string &upaxis, bool silent ){
3387 return loadPLY( filename, origin, height, rotation, RGB::blue, upaxis, silent );
3388}
+
3389
+
3390std::vector<uint> Context::loadPLY(const char* filename, const vec3 &origin, float height, const RGBcolor &default_color, const std::string &upaxis, bool silent ){
3391 return loadPLY( filename, origin, height, make_SphericalCoord(0,0), default_color, upaxis, silent );
3392}
+
3393
+
3394std::vector<uint> Context::loadPLY(const char* filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, const std::string &upaxis, bool silent ){
3395
3396 if( !silent ) {
@@ -3754,7 +3831,9 @@
3674 return UUID;
3675
3676}
+
3677
+
3678void Context::writePLY( const char* filename ) const{
3679
3680 std::ofstream PLYfile;
@@ -3818,19 +3897,27 @@
3738
3739
3740}
+
3741
+
3742std::vector<uint> Context::loadOBJ(const char* filename, bool silent ){
3743 return loadOBJ(filename,nullorigin,0,nullrotation,RGB::blue,"ZUP",silent);
3744}
+
3745
+
3746std::vector<uint> Context::loadOBJ(const char* filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, bool silent ){
3747 return loadOBJ(filename,origin,make_vec3(0,0,height),rotation,default_color,"ZUP",silent);
3748}
+
3749
+
3750std::vector<uint> Context::loadOBJ(const char* filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, const char* upaxis, bool silent ) {
3751 return loadOBJ(filename,origin,make_vec3(0,0,height),rotation,default_color,upaxis,silent);
3752}
+
3753
+
3754std::vector<uint> Context::loadOBJ(const char* filename, const vec3 &origin, const helios::vec3 &scale, const SphericalCoord &rotation, const RGBcolor &default_color, const char* upaxis, bool silent ){
3755
3756 if( !silent ) {
@@ -4088,6 +4175,7 @@
4008 return UUID;
4009
4010}
+
4011
4012std::map<std::string, Context::OBJmaterial> Context::loadMTL(const std::string &filebase, const std::string &material_file ){
4013
@@ -4208,14 +4296,19 @@
4128
4129}
4130
+
4131void Context::writeOBJ( const std::string &filename ) const {
4132 writeOBJ(filename, getAllUUIDs(),{});
4133}
+
4134
+
4135void Context::writeOBJ( const std::string &filename, const std::vector<uint> &UUIDs ) const {
4136 writeOBJ(filename,UUIDs,{});
4137}
+
4138
+
4139void Context::writeOBJ( const std::string &filename, const std::vector<uint> &UUIDs, const std::vector<std::string> &primitive_dat_fields ) const{
4140
4141 //To-Do list for OBJ writer
@@ -4549,11 +4642,15 @@
4469
4470 std::cout << "done." << std::endl;
4471}
+
4472
+
4473void Context::writePrimitiveData( std::string filename, const std::vector<std::string> &column_format, bool print_header ) const{
4474 writePrimitiveData(filename,column_format,getAllUUIDs(),print_header);
4475}
+
4476
+
4477void Context::writePrimitiveData( std::string filename, const std::vector<std::string> &column_format, const std::vector<uint> &UUIDs, bool print_header ) const{
4478
4479 std::ofstream file(filename);
@@ -4628,7 +4725,9 @@
4548 file.close();
4549
4550}
+
4551
+
4552void Context::loadTabularTimeseriesData( const std::string &data_file, const std::vector<std::string> &col_labels, const std::string &a_delimeter, const std::string &a_date_string_format, uint headerlines ){
4553
4554 std::ifstream datafile(data_file); //open the file
@@ -4912,221 +5011,223 @@
4832 datafile.close();
4833
4834}
+
-
helios::HeliosDataType
HeliosDataType
Data types.
Definition: Context.h:41
-
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition: Context.h:59
-
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition: Context.h:49
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
-
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition: Context.h:43
-
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition: Context.h:63
-
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition: Context.h:53
-
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition: Context.h:61
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition: Context.h:57
-
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition: Context.h:55
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
-
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition: Context.h:31
-
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition: Context.h:33
-
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition: Context.h:37
-
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition: Context.h:35
-
helios::OBJECT_TYPE_BOX
@ OBJECT_TYPE_BOX
Box.
Definition: Context.h:136
-
helios::OBJECT_TYPE_POLYMESH
@ OBJECT_TYPE_POLYMESH
< Triangular Mesh
Definition: Context.h:140
-
helios::OBJECT_TYPE_TUBE
@ OBJECT_TYPE_TUBE
Tube.
Definition: Context.h:134
-
helios::OBJECT_TYPE_CONE
@ OBJECT_TYPE_CONE
< Cone/tapered cylinder
Definition: Context.h:142
-
helios::OBJECT_TYPE_DISK
@ OBJECT_TYPE_DISK
< Disk
Definition: Context.h:138
-
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition: Context.h:130
-
helios::OBJECT_TYPE_SPHERE
@ OBJECT_TYPE_SPHERE
< Sphere
Definition: Context.h:132
-
helios::Box
Box compound object class.
Definition: Context.h:759
-
helios::Box::getSubdivisionCount
helios::int3 getSubdivisionCount() const
Get the number of sub-patch divisions of the box object in each Cartesian direction.
Definition: Context.cpp:3996
-
helios::Box::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the box object.
Definition: Context.cpp:3980
-
helios::Box::getSize
vec3 getSize() const
Get the dimensions of the box object in each Cartesian direction.
Definition: Context.cpp:3961
- -
helios::CompoundObject::setPrimitiveUUIDs
void setPrimitiveUUIDs(const std::vector< uint > &UUIDs)
Method to set the UUIDs of object child primitives.
Definition: Context.cpp:2517
-
helios::CompoundObject::getTextureFile
std::string getTextureFile() const
Method to return the texture map file of an Object.
Definition: Context.cpp:2349
-
helios::CompoundObject::listObjectData
std::vector< std::string > listObjectData() const
Return labels for all object data for this particular object.
Definition: Context_data.cpp:3662
-
helios::CompoundObject::hasTexture
bool hasTexture() const
Method to check whether this object has texture data.
Definition: Context.cpp:2341
-
helios::CompoundObject::setTransformationMatrix
void setTransformationMatrix(float(&T)[16])
Method to set the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2509
-
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2247
-
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition: Context.cpp:2256
-
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2503
-
helios::Cone
Cone compound object class.
Definition: Context.h:847
-
helios::Cone::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the cone object.
Definition: Context.cpp:4171
-
helios::Cone::getNodeCoordinates
std::vector< helios::vec3 > getNodeCoordinates() const
Get the Cartesian coordinates of each of the cone object nodes.
Definition: Context.cpp:4130
-
helios::Cone::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the cone object nodes.
Definition: Context.cpp:4159
-
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition: Context.cpp:7139
-
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition: Context_fileIO.cpp:3378
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
-
helios::Context::getDiskObjectPointer
Disk * getDiskObjectPointer(uint ObjID) const
Get a pointer to a Disk Compound Object.
Definition: Context.cpp:4022
-
helios::Context::getUniquePrimitiveParentObjectIDs
std::vector< uint > getUniquePrimitiveParentObjectIDs(const std::vector< uint > &UUIDs) const
Method to return unique parent object IDs for a vector of primitive UUIDs.
Definition: Context.cpp:7022
-
helios::Context::loadTabularTimeseriesData
void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
Load tabular weather data from text file into timeseries.
Definition: Context_fileIO.cpp:4552
-
helios::Context::getBoxObjectPointer
Box * getBoxObjectPointer(uint ObjID) const
Get a pointer to a Box Compound Object.
Definition: Context.cpp:3954
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition: Context.cpp:4123
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::getLoadedXMLFiles
std::vector< std::string > getLoadedXMLFiles()
Get names of XML files that are currently loaded.
Definition: Context_fileIO.cpp:2399
-
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition: Context.cpp:1059
-
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:6988
-
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition: Context.cpp:7179
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition: Context_data.cpp:2467
-
helios::Context::getPrimitiveSolidFraction
float getPrimitiveSolidFraction(uint UUID) const
Get fraction of primitive surface area that is non-transparent.
Definition: Context.cpp:7221
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition: Context.cpp:2907
-
helios::Context::writeOBJ
void writeOBJ(const std::string &filename) const
Write geometry in the Context to a Wavefront file (.obj)
Definition: Context_fileIO.cpp:4131
-
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition: Context.cpp:1166
-
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition: Context_fileIO.cpp:3742
-
helios::Context::getSphereObjectPointer
Sphere * getSphereObjectPointer(uint ObjID) const
Get a pointer to a Sphere Compound Object.
Definition: Context.cpp:3410
-
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7197
-
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition: Context_data.cpp:4502
-
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition: Context.cpp:1099
-
helios::Context::getGlobalDataSize
size_t getGlobalDataSize(const char *label) const
Get the size/length of global data.
Definition: Context_data.cpp:4512
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::writePLY
void writePLY(const char *filename) const
Write geometry in the Context to a Stanford polygon file (.ply)
Definition: Context_fileIO.cpp:3678
-
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition: Context_data.cpp:3844
-
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition: Context.cpp:7217
-
helios::Context::getTubeObjectPointer
Tube * getTubeObjectPointer(uint ObjID) const
Get a pointer to a Tube Compound Object.
Definition: Context.cpp:3486
-
helios::Context::writePrimitiveData
void writePrimitiveData(std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
Write primitive data to an ASCII text file for all primitives in the Context.
Definition: Context_fileIO.cpp:4473
-
helios::Context::writeXML
void writeXML(const char *filename, bool quiet=false) const
Write Context geometry and data to XML file for all UUIDs in the context.
Definition: Context_fileIO.cpp:2658
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition: Context.cpp:3312
-
helios::Context::scanXMLForTag
static bool scanXMLForTag(const std::string &filename, const std::string &tag, const std::string &label="")
Scan a Helios XML file to check if a tag exists.
Definition: Context_fileIO.cpp:2403
-
helios::Context::writeXML_byobject
void writeXML_byobject(const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
Write Context geometry and data to XML file for a subset of compound object IDs in the context.
Definition: Context_fileIO.cpp:2662
-
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition: Context.cpp:1136
-
helios::Context::setPrimitiveTransformationMatrix
void setPrimitiveTransformationMatrix(uint UUID, float(&T)[16])
Method to set the Affine transformation matrix of a Primitive.
Definition: Context.cpp:7112
-
helios::Disk
Disk compound object class.
Definition: Context.h:795
-
helios::Disk::getSize
vec2 getSize() const
Get the lateral dimensions of the disk object.
Definition: Context.cpp:4029
-
helios::Disk::getSubdivisionCount
int2 getSubdivisionCount() const
Get the number of sub-triangle divisions of the disk object.
Definition: Context.cpp:4061
-
helios::Disk::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the disk object.
Definition: Context.cpp:4045
-
helios::Sphere
Sphere compound object class.
Definition: Context.h:624
-
helios::Sphere::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-patch divisions of the sphere object.
Definition: Context.cpp:3455
-
helios::Sphere::getRadius
helios::vec3 getRadius() const
Get the radius of the sphere.
Definition: Context.cpp:3417
-
helios::Sphere::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the sphere object.
Definition: Context.cpp:3439
-
helios::Tile
Tile compound object class.
Definition: Context.h:581
-
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition: Context.cpp:3343
-
helios::Tube
Tube compound object class.
Definition: Context.h:660
-
helios::Tube::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the tube object nodes.
Definition: Context.cpp:3508
-
helios::Tube::getNodeColors
std::vector< helios::RGBcolor > getNodeColors() const
Get the colors at each of the tube object nodes.
Definition: Context.cpp:3525
-
helios::Tube::getNodes
std::vector< helios::vec3 > getNodes() const
Get the Cartesian coordinates of each of the tube object nodes.
Definition: Context.cpp:3493
-
helios::Tube::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the tube object.
Definition: Context.cpp:3533
-
helios::XMLparser::parse_data_vec3
static int parse_data_vec3(const pugi::xml_node &node_data, std::vector< vec3 > &data)
Parse vector data of type 'vec3' within an XML tag.
Definition: Context_fileIO.cpp:154
-
helios::XMLparser::parse_data_int2
static int parse_data_int2(const pugi::xml_node &node_data, std::vector< int2 > &data)
Parse vector data of type 'int2' within an XML tag.
Definition: Context_fileIO.cpp:206
-
helios::XMLparser::parse_radius
static int parse_radius(const pugi::xml_node &node_data, std::vector< float > &radius)
Parse the value within a <radius> (radius at nodes of a tube or cone) tag.
Definition: Context_fileIO.cpp:491
-
helios::XMLparser::parse_data_float
static int parse_data_float(const pugi::xml_node &node_data, std::vector< float > &data)
Parse vector data of type 'float' within an XML tag.
Definition: Context_fileIO.cpp:20
-
helios::XMLparser::parse_transform
static int parse_transform(const pugi::xml_node &node_data, float(&transform)[16])
Parse the value within a <transform> (transformation matrix) tag.
Definition: Context_fileIO.cpp:298
-
helios::XMLparser::parse_data_uint
static int parse_data_uint(const pugi::xml_node &node_data, std::vector< uint > &data)
Parse vector data of type 'uint' within an XML tag.
Definition: Context_fileIO.cpp:89
-
helios::XMLparser::parse_subdivisions
static int parse_subdivisions(const pugi::xml_node &node_data, uint &subdivisions)
Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
Definition: Context_fileIO.cpp:411
-
helios::XMLparser::parse_data_vec4
static int parse_data_vec4(const pugi::xml_node &node_data, std::vector< vec4 > &data)
Parse vector data of type 'vac4' within an XML tag.
Definition: Context_fileIO.cpp:180
-
helios::XMLparser::parse_data_int3
static int parse_data_int3(const pugi::xml_node &node_data, std::vector< int3 > &data)
Parse vector data of type 'int3' within an XML tag.
Definition: Context_fileIO.cpp:230
-
helios::XMLparser::parse_data_string
static int parse_data_string(const pugi::xml_node &node_data, std::vector< std::string > &data)
Parse vector data of type 'string' within an XML tag.
Definition: Context_fileIO.cpp:112
-
helios::XMLparser::parse_data_int
static int parse_data_int(const pugi::xml_node &node_data, std::vector< int > &data)
Parse vector data of type 'int' within an XML tag.
Definition: Context_fileIO.cpp:66
-
helios::XMLparser::parse_texture
static int parse_texture(const pugi::xml_node &node_data, std::string &texture)
Parse the value within an <texture> (path to image texture) tag.
Definition: Context_fileIO.cpp:327
-
helios::XMLparser::parse_data_vec2
static int parse_data_vec2(const pugi::xml_node &node_data, std::vector< vec2 > &data)
Parse vector data of type 'vec2' within an XML tag.
Definition: Context_fileIO.cpp:130
-
helios::XMLparser::parse_data_double
static int parse_data_double(const pugi::xml_node &node_data, std::vector< double > &data)
Parse vector data of type 'double' within an XML tag.
Definition: Context_fileIO.cpp:43
-
helios::XMLparser::parse_solid_fraction
static int parse_solid_fraction(const pugi::xml_node &node_data, float &solid_fraction)
Parse the value within a <solid_fraction> (primitive solid fraction) tag.
Definition: Context_fileIO.cpp:365
-
helios::XMLparser::parse_objID
static int parse_objID(const pugi::xml_node &node_data, uint &objID)
Parse the value within an <objID> (object ID) tag.
Definition: Context_fileIO.cpp:281
-
helios::XMLparser::parse_textureUV
static int parse_textureUV(const pugi::xml_node &node_data, std::vector< vec2 > &uvs)
Parse the value within a <textureUV> (texture coordinates) tag.
Definition: Context_fileIO.cpp:341
-
helios::XMLparser::parse_nodes
static int parse_nodes(const pugi::xml_node &node_data, std::vector< vec3 > &nodes)
Parse the value within a <nodes> (coordinates defining nodes of a tube or cone) tag.
Definition: Context_fileIO.cpp:465
-
helios::XMLparser::parse_data_int4
static int parse_data_int4(const pugi::xml_node &node_data, std::vector< int4 > &data)
Parse vector data of type 'int4' within an XML tag.
Definition: Context_fileIO.cpp:255
-
helios::XMLparser::parse_vertices
static int parse_vertices(const pugi::xml_node &node_data, std::vector< float > &vertices)
Parse the value within a <vertices> (primitive vertex coordinates) tag.
Definition: Context_fileIO.cpp:380
-
helios::parse_double
bool parse_double(const std::string &input_string, double &converted_double)
Convert a string into a double with error checking.
Definition: global.cpp:779
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::parse_float
bool parse_float(const std::string &input_string, float &converted_float)
Convert a string into a float with error checking.
Definition: global.cpp:763
-
helios::parse_uint
bool parse_uint(const std::string &input_string, uint &converted_uint)
Convert a string into an unsigned integer with error checking.
Definition: global.cpp:842
-
helios::getFileExtension
std::string getFileExtension(const std::string &filepath)
Parse a file string to get the extension.
Definition: global.cpp:3075
-
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition: global.cpp:3102
-
helios::getFileName
std::string getFileName(const std::string &filepath)
Parse a file string to get the filename including extension.
Definition: global.cpp:3085
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::parse_int
bool parse_int(const std::string &input_string, int &converted_int)
Convert a string into an integer with error checking.
Definition: global.cpp:794
-
helios::nullorigin
vec3 nullorigin
Default null vec3 that gives the origin (0,0,0)
Definition: global.cpp:58
-
helios::getFileStem
std::string getFileStem(const std::string &filepath)
Parse a file string to get the filename without extension.
Definition: global.cpp:3080
-
helios::makeIdentityMatrix
void makeIdentityMatrix(float(&T)[16])
Construct an identity matrix.
Definition: global.cpp:555
-
helios::getFilePath
std::string getFilePath(const std::string &filepath, bool trailingslash=true)
Parse a file string to get the path (i.e., portion of the string before the file name).
Definition: global.cpp:3090
-
helios::nullrotation
SphericalCoord nullrotation
Default null SphericalCoord that applies no rotation.
Definition: global.cpp:57
-
helios::Context::addDiskObject
uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition: Context.cpp:5256
-
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:4728
-
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition: Context.cpp:5426
-
helios::Context::addBoxObject
uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition: Context.cpp:5000
-
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition: Context.cpp:5399
-
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:4550
-
helios::Context::addSphereObject
uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:4310
-
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition: global.cpp:79
-
helios::string2vec2
vec2 string2vec2(const char *str)
Convert a space-delimited string into a vec2 vector.
Definition: global.cpp:623
-
helios::string2int2
int2 string2int2(const char *str)
Convert a space-delimited string into an int2 vector.
Definition: global.cpp:683
-
helios::trim_whitespace
std::string trim_whitespace(const std::string &input)
Remove leading and trailing whitespace from a string.
Definition: global.cpp:1016
-
helios::string2vec3
vec3 string2vec3(const char *str)
Convert a space-delimited string into a vec3 vector.
Definition: global.cpp:643
-
helios::string2RGBcolor
RGBAcolor string2RGBcolor(const char *str)
Convert a space-delimited string into an RGBcolor vector.
Definition: global.cpp:743
-
helios::string2int3
int3 string2int3(const char *str)
Convert a space-delimited string into an int3 vector.
Definition: global.cpp:703
-
helios::separate_string_by_delimiter
std::vector< std::string > separate_string_by_delimiter(const std::string &inputstring, const std::string &delimiter)
Separate string by delimiter and store into a vector.
Definition: global.cpp:1032
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition: Context.cpp:1372
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition: Context.cpp:1958
-
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition: Context.cpp:1823
-
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition: Context.cpp:1994
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_Time
Time make_Time(int hour, int minute)
Make a Time vector.
Definition: helios_vector_types.h:1427
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition: helios_vector_types.h:1133
-
helios::make_Date
Date make_Date(int day, int month, int year)
Make a Date vector.
Definition: helios_vector_types.h:1241
-
helios::Julian2Calendar
Date Julian2Calendar(int JulianDay, int year)
Convert a Julian day to a calendar Date vector.
Definition: helios_vector_types.h:1268
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
- -
helios::Date::month
int month
Month of year.
Definition: helios_vector_types.h:1174
-
helios::Date::incrementDay
void incrementDay()
Increment Date vector by one day.
Definition: global.cpp:202
-
helios::Date::day
int day
Day of month.
Definition: helios_vector_types.h:1172
-
helios::Date::year
int year
Year in YYYY format.
Definition: helios_vector_types.h:1176
-
helios::GlobalData
Structure for Global Data Entities.
Definition: Context.h:102
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBAcolor::r
float r
Red color component.
Definition: helios_vector_types.h:1029
-
helios::RGBAcolor::a
float a
Alpha (transparency) component.
Definition: helios_vector_types.h:1038
-
helios::RGBAcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:1035
-
helios::RGBAcolor::g
float g
Green color component.
Definition: helios_vector_types.h:1032
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::scale
void scale(float scale_factor)
Scale RGBcolor by some factor.
Definition: helios_vector_types.h:910
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
- -
helios::Time::second
int second
Second of minute.
Definition: helios_vector_types.h:1355
-
helios::Time::hour
int hour
Hour of day.
Definition: helios_vector_types.h:1359
-
helios::Time::minute
int minute
Minute of hour.
Definition: helios_vector_types.h:1357
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::int4
Vector of four elements of type 'int'.
Definition: helios_vector_types.h:243
-
helios::int4::x
int x
First element in vector.
Definition: helios_vector_types.h:247
-
helios::int4::z
int z
Third element in vector.
Definition: helios_vector_types.h:251
-
helios::int4::w
int w
Fourth element in vector.
Definition: helios_vector_types.h:253
-
helios::int4::y
int y
Second element in vector.
Definition: helios_vector_types.h:249
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec4
Vector of four elements of type 'float'.
Definition: helios_vector_types.h:673
-
helios::vec4::y
float y
Second element in vector.
Definition: helios_vector_types.h:679
-
helios::vec4::w
float w
Fourth element in vector.
Definition: helios_vector_types.h:683
-
helios::vec4::z
float z
Third element in vector.
Definition: helios_vector_types.h:681
-
helios::vec4::x
float x
First element in vector.
Definition: helios_vector_types.h:677
+
helios::HeliosDataType
HeliosDataType
Data types.
Definition Context.h:41
+
helios::HELIOS_TYPE_INT3
@ HELIOS_TYPE_INT3
helios::int3 data type
Definition Context.h:59
+
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition Context.h:49
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
+
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition Context.h:43
+
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition Context.h:63
+
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition Context.h:53
+
helios::HELIOS_TYPE_INT4
@ HELIOS_TYPE_INT4
helios::int4 data type
Definition Context.h:61
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition Context.h:57
+
helios::HELIOS_TYPE_VEC4
@ HELIOS_TYPE_VEC4
helios::vec4 data type
Definition Context.h:55
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
+
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition Context.h:31
+
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition Context.h:33
+
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition Context.h:37
+
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition Context.h:35
+
helios::OBJECT_TYPE_BOX
@ OBJECT_TYPE_BOX
Box.
Definition Context.h:136
+
helios::OBJECT_TYPE_POLYMESH
@ OBJECT_TYPE_POLYMESH
< Triangular Mesh
Definition Context.h:140
+
helios::OBJECT_TYPE_TUBE
@ OBJECT_TYPE_TUBE
Tube.
Definition Context.h:134
+
helios::OBJECT_TYPE_CONE
@ OBJECT_TYPE_CONE
< Cone/tapered cylinder
Definition Context.h:142
+
helios::OBJECT_TYPE_DISK
@ OBJECT_TYPE_DISK
< Disk
Definition Context.h:138
+
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition Context.h:130
+
helios::OBJECT_TYPE_SPHERE
@ OBJECT_TYPE_SPHERE
< Sphere
Definition Context.h:132
+
helios::Box
Box compound object class.
Definition Context.h:759
+
helios::Box::getSubdivisionCount
helios::int3 getSubdivisionCount() const
Get the number of sub-patch divisions of the box object in each Cartesian direction.
Definition Context.cpp:3996
+
helios::Box::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the box object.
Definition Context.cpp:3980
+
helios::Box::getSize
vec3 getSize() const
Get the dimensions of the box object in each Cartesian direction.
Definition Context.cpp:3961
+ +
helios::CompoundObject::setPrimitiveUUIDs
void setPrimitiveUUIDs(const std::vector< uint > &UUIDs)
Method to set the UUIDs of object child primitives.
Definition Context.cpp:2517
+
helios::CompoundObject::getTextureFile
std::string getTextureFile() const
Method to return the texture map file of an Object.
Definition Context.cpp:2349
+
helios::CompoundObject::listObjectData
std::vector< std::string > listObjectData() const
Return labels for all object data for this particular object.
Definition Context_data.cpp:3662
+
helios::CompoundObject::hasTexture
bool hasTexture() const
Method to check whether this object has texture data.
Definition Context.cpp:2341
+
helios::CompoundObject::setTransformationMatrix
void setTransformationMatrix(float(&T)[16])
Method to set the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2509
+
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2247
+
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition Context.cpp:2256
+
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2503
+
helios::Cone
Cone compound object class.
Definition Context.h:847
+
helios::Cone::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the cone object.
Definition Context.cpp:4171
+
helios::Cone::getNodeCoordinates
std::vector< helios::vec3 > getNodeCoordinates() const
Get the Cartesian coordinates of each of the cone object nodes.
Definition Context.cpp:4130
+
helios::Cone::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the cone object nodes.
Definition Context.cpp:4159
+
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition Context.cpp:7139
+
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition Context_fileIO.cpp:3378
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217
+
helios::Context::getDiskObjectPointer
Disk * getDiskObjectPointer(uint ObjID) const
Get a pointer to a Disk Compound Object.
Definition Context.cpp:4022
+
helios::Context::getUniquePrimitiveParentObjectIDs
std::vector< uint > getUniquePrimitiveParentObjectIDs(const std::vector< uint > &UUIDs) const
Method to return unique parent object IDs for a vector of primitive UUIDs.
Definition Context.cpp:7022
+
helios::Context::loadTabularTimeseriesData
void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
Load tabular weather data from text file into timeseries.
Definition Context_fileIO.cpp:4552
+
helios::Context::getBoxObjectPointer
Box * getBoxObjectPointer(uint ObjID) const
Get a pointer to a Box Compound Object.
Definition Context.cpp:3954
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition Context.cpp:4123
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::getLoadedXMLFiles
std::vector< std::string > getLoadedXMLFiles()
Get names of XML files that are currently loaded.
Definition Context_fileIO.cpp:2399
+
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition Context.cpp:1059
+
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:6988
+
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition Context.cpp:7179
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition Context_data.cpp:2467
+
helios::Context::getPrimitiveSolidFraction
float getPrimitiveSolidFraction(uint UUID) const
Get fraction of primitive surface area that is non-transparent.
Definition Context.cpp:7221
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition Context.cpp:2907
+
helios::Context::writeOBJ
void writeOBJ(const std::string &filename) const
Write geometry in the Context to a Wavefront file (.obj)
Definition Context_fileIO.cpp:4131
+
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition Context.cpp:1166
+
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition Context_fileIO.cpp:3742
+
helios::Context::getSphereObjectPointer
Sphere * getSphereObjectPointer(uint ObjID) const
Get a pointer to a Sphere Compound Object.
Definition Context.cpp:3410
+
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7197
+
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition Context_data.cpp:4502
+
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition Context.cpp:1099
+
helios::Context::getGlobalDataSize
size_t getGlobalDataSize(const char *label) const
Get the size/length of global data.
Definition Context_data.cpp:4512
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::writePLY
void writePLY(const char *filename) const
Write geometry in the Context to a Stanford polygon file (.ply)
Definition Context_fileIO.cpp:3678
+
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition Context_data.cpp:3844
+
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition Context.cpp:7217
+
helios::Context::getTubeObjectPointer
Tube * getTubeObjectPointer(uint ObjID) const
Get a pointer to a Tube Compound Object.
Definition Context.cpp:3486
+
helios::Context::writePrimitiveData
void writePrimitiveData(std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
Write primitive data to an ASCII text file for all primitives in the Context.
Definition Context_fileIO.cpp:4473
+
helios::Context::writeXML
void writeXML(const char *filename, bool quiet=false) const
Write Context geometry and data to XML file for all UUIDs in the context.
Definition Context_fileIO.cpp:2658
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition Context.cpp:3312
+
helios::Context::scanXMLForTag
static bool scanXMLForTag(const std::string &filename, const std::string &tag, const std::string &label="")
Scan a Helios XML file to check if a tag exists.
Definition Context_fileIO.cpp:2403
+
helios::Context::writeXML_byobject
void writeXML_byobject(const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
Write Context geometry and data to XML file for a subset of compound object IDs in the context.
Definition Context_fileIO.cpp:2662
+
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition Context.cpp:1136
+
helios::Context::setPrimitiveTransformationMatrix
void setPrimitiveTransformationMatrix(uint UUID, float(&T)[16])
Method to set the Affine transformation matrix of a Primitive.
Definition Context.cpp:7112
+
helios::Disk
Disk compound object class.
Definition Context.h:795
+
helios::Disk::getSize
vec2 getSize() const
Get the lateral dimensions of the disk object.
Definition Context.cpp:4029
+
helios::Disk::getSubdivisionCount
int2 getSubdivisionCount() const
Get the number of sub-triangle divisions of the disk object.
Definition Context.cpp:4061
+
helios::Disk::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the disk object.
Definition Context.cpp:4045
+
helios::Sphere
Sphere compound object class.
Definition Context.h:624
+
helios::Sphere::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-patch divisions of the sphere object.
Definition Context.cpp:3455
+
helios::Sphere::getRadius
helios::vec3 getRadius() const
Get the radius of the sphere.
Definition Context.cpp:3417
+
helios::Sphere::getCenter
vec3 getCenter() const
Get the Cartesian coordinates of the center of the sphere object.
Definition Context.cpp:3439
+
helios::Tile
Tile compound object class.
Definition Context.h:581
+
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition Context.cpp:3343
+
helios::Tube
Tube compound object class.
Definition Context.h:660
+
helios::Tube::getNodeRadii
std::vector< float > getNodeRadii() const
Get the radius at each of the tube object nodes.
Definition Context.cpp:3508
+
helios::Tube::getNodeColors
std::vector< helios::RGBcolor > getNodeColors() const
Get the colors at each of the tube object nodes.
Definition Context.cpp:3525
+
helios::Tube::getNodes
std::vector< helios::vec3 > getNodes() const
Get the Cartesian coordinates of each of the tube object nodes.
Definition Context.cpp:3493
+
helios::Tube::getSubdivisionCount
uint getSubdivisionCount() const
Get the number of sub-triangle divisions of the tube object.
Definition Context.cpp:3533
+
helios::XMLparser::parse_data_vec3
static int parse_data_vec3(const pugi::xml_node &node_data, std::vector< vec3 > &data)
Parse vector data of type 'vec3' within an XML tag.
Definition Context_fileIO.cpp:154
+
helios::XMLparser::parse_data_int2
static int parse_data_int2(const pugi::xml_node &node_data, std::vector< int2 > &data)
Parse vector data of type 'int2' within an XML tag.
Definition Context_fileIO.cpp:206
+
helios::XMLparser::parse_radius
static int parse_radius(const pugi::xml_node &node_data, std::vector< float > &radius)
Parse the value within a <radius> (radius at nodes of a tube or cone) tag.
Definition Context_fileIO.cpp:491
+
helios::XMLparser::parse_data_float
static int parse_data_float(const pugi::xml_node &node_data, std::vector< float > &data)
Parse vector data of type 'float' within an XML tag.
Definition Context_fileIO.cpp:20
+
helios::XMLparser::parse_transform
static int parse_transform(const pugi::xml_node &node_data, float(&transform)[16])
Parse the value within a <transform> (transformation matrix) tag.
Definition Context_fileIO.cpp:298
+
helios::XMLparser::parse_data_uint
static int parse_data_uint(const pugi::xml_node &node_data, std::vector< uint > &data)
Parse vector data of type 'uint' within an XML tag.
Definition Context_fileIO.cpp:89
+
helios::XMLparser::parse_subdivisions
static int parse_subdivisions(const pugi::xml_node &node_data, uint &subdivisions)
Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
Definition Context_fileIO.cpp:411
+
helios::XMLparser::parse_data_vec4
static int parse_data_vec4(const pugi::xml_node &node_data, std::vector< vec4 > &data)
Parse vector data of type 'vac4' within an XML tag.
Definition Context_fileIO.cpp:180
+
helios::XMLparser::parse_data_int3
static int parse_data_int3(const pugi::xml_node &node_data, std::vector< int3 > &data)
Parse vector data of type 'int3' within an XML tag.
Definition Context_fileIO.cpp:230
+
helios::XMLparser::parse_data_string
static int parse_data_string(const pugi::xml_node &node_data, std::vector< std::string > &data)
Parse vector data of type 'string' within an XML tag.
Definition Context_fileIO.cpp:112
+
helios::XMLparser::parse_data_int
static int parse_data_int(const pugi::xml_node &node_data, std::vector< int > &data)
Parse vector data of type 'int' within an XML tag.
Definition Context_fileIO.cpp:66
+
helios::XMLparser::parse_texture
static int parse_texture(const pugi::xml_node &node_data, std::string &texture)
Parse the value within an <texture> (path to image texture) tag.
Definition Context_fileIO.cpp:327
+
helios::XMLparser::parse_data_vec2
static int parse_data_vec2(const pugi::xml_node &node_data, std::vector< vec2 > &data)
Parse vector data of type 'vec2' within an XML tag.
Definition Context_fileIO.cpp:130
+
helios::XMLparser::parse_data_double
static int parse_data_double(const pugi::xml_node &node_data, std::vector< double > &data)
Parse vector data of type 'double' within an XML tag.
Definition Context_fileIO.cpp:43
+
helios::XMLparser::parse_solid_fraction
static int parse_solid_fraction(const pugi::xml_node &node_data, float &solid_fraction)
Parse the value within a <solid_fraction> (primitive solid fraction) tag.
Definition Context_fileIO.cpp:365
+
helios::XMLparser::parse_objID
static int parse_objID(const pugi::xml_node &node_data, uint &objID)
Parse the value within an <objID> (object ID) tag.
Definition Context_fileIO.cpp:281
+
helios::XMLparser::parse_textureUV
static int parse_textureUV(const pugi::xml_node &node_data, std::vector< vec2 > &uvs)
Parse the value within a <textureUV> (texture coordinates) tag.
Definition Context_fileIO.cpp:341
+
helios::XMLparser::parse_nodes
static int parse_nodes(const pugi::xml_node &node_data, std::vector< vec3 > &nodes)
Parse the value within a <nodes> (coordinates defining nodes of a tube or cone) tag.
Definition Context_fileIO.cpp:465
+
helios::XMLparser::parse_data_int4
static int parse_data_int4(const pugi::xml_node &node_data, std::vector< int4 > &data)
Parse vector data of type 'int4' within an XML tag.
Definition Context_fileIO.cpp:255
+
helios::XMLparser::parse_vertices
static int parse_vertices(const pugi::xml_node &node_data, std::vector< float > &vertices)
Parse the value within a <vertices> (primitive vertex coordinates) tag.
Definition Context_fileIO.cpp:380
+
helios::parse_double
bool parse_double(const std::string &input_string, double &converted_double)
Convert a string into a double with error checking.
Definition global.cpp:779
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::parse_float
bool parse_float(const std::string &input_string, float &converted_float)
Convert a string into a float with error checking.
Definition global.cpp:763
+
helios::parse_uint
bool parse_uint(const std::string &input_string, uint &converted_uint)
Convert a string into an unsigned integer with error checking.
Definition global.cpp:842
+
helios::getFileExtension
std::string getFileExtension(const std::string &filepath)
Parse a file string to get the extension.
Definition global.cpp:3075
+
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition global.cpp:3102
+
helios::getFileName
std::string getFileName(const std::string &filepath)
Parse a file string to get the filename including extension.
Definition global.cpp:3085
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::parse_int
bool parse_int(const std::string &input_string, int &converted_int)
Convert a string into an integer with error checking.
Definition global.cpp:794
+
helios::nullorigin
vec3 nullorigin
Default null vec3 that gives the origin (0,0,0)
Definition global.cpp:58
+
helios::getFileStem
std::string getFileStem(const std::string &filepath)
Parse a file string to get the filename without extension.
Definition global.cpp:3080
+
helios::makeIdentityMatrix
void makeIdentityMatrix(float(&T)[16])
Construct an identity matrix.
Definition global.cpp:555
+
helios::getFilePath
std::string getFilePath(const std::string &filepath, bool trailingslash=true)
Parse a file string to get the path (i.e., portion of the string before the file name).
Definition global.cpp:3090
+
helios::nullrotation
SphericalCoord nullrotation
Default null SphericalCoord that applies no rotation.
Definition global.cpp:57
+
helios::Context::addDiskObject
uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
Add new Disk geometric primitive to the Context given its center, and size.
Definition Context.cpp:5256
+
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:4728
+
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition Context.cpp:5426
+
helios::Context::addBoxObject
uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
Add a rectangular prism tessellated with Patch primitives.
Definition Context.cpp:5000
+
helios::Context::addPolymeshObject
uint addPolymeshObject(const std::vector< uint > &UUIDs)
Add new Polymesh Compound Object.
Definition Context.cpp:5399
+
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:4550
+
helios::Context::addSphereObject
uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:4310
+
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition global.cpp:79
+
helios::string2vec2
vec2 string2vec2(const char *str)
Convert a space-delimited string into a vec2 vector.
Definition global.cpp:623
+
helios::string2int2
int2 string2int2(const char *str)
Convert a space-delimited string into an int2 vector.
Definition global.cpp:683
+
helios::trim_whitespace
std::string trim_whitespace(const std::string &input)
Remove leading and trailing whitespace from a string.
Definition global.cpp:1016
+
helios::string2vec3
vec3 string2vec3(const char *str)
Convert a space-delimited string into a vec3 vector.
Definition global.cpp:643
+
helios::string2RGBcolor
RGBAcolor string2RGBcolor(const char *str)
Convert a space-delimited string into an RGBcolor vector.
Definition global.cpp:743
+
helios::string2int3
int3 string2int3(const char *str)
Convert a space-delimited string into an int3 vector.
Definition global.cpp:703
+
helios::separate_string_by_delimiter
std::vector< std::string > separate_string_by_delimiter(const std::string &inputstring, const std::string &delimiter)
Separate string by delimiter and store into a vector.
Definition global.cpp:1032
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition Context.cpp:1372
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition Context.cpp:1958
+
helios::Context::addTimeseriesData
void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
Add a data point to timeseries of data.
Definition Context.cpp:1823
+
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition Context.cpp:1994
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_Time
Time make_Time(int hour, int minute)
Make a Time vector.
Definition helios_vector_types.h:1427
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition helios_vector_types.h:1133
+
helios::make_Date
Date make_Date(int day, int month, int year)
Make a Date vector.
Definition helios_vector_types.h:1241
+
helios::Julian2Calendar
Date Julian2Calendar(int JulianDay, int year)
Convert a Julian day to a calendar Date vector.
Definition helios_vector_types.h:1268
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+ +
helios::Date::month
int month
Month of year.
Definition helios_vector_types.h:1174
+
helios::Date::incrementDay
void incrementDay()
Increment Date vector by one day.
Definition global.cpp:202
+
helios::Date::day
int day
Day of month.
Definition helios_vector_types.h:1172
+
helios::Date::year
int year
Year in YYYY format.
Definition helios_vector_types.h:1176
+
helios::GlobalData
Structure for Global Data Entities.
Definition Context.h:102
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBAcolor::r
float r
Red color component.
Definition helios_vector_types.h:1029
+
helios::RGBAcolor::a
float a
Alpha (transparency) component.
Definition helios_vector_types.h:1038
+
helios::RGBAcolor::b
float b
Blue color component.
Definition helios_vector_types.h:1035
+
helios::RGBAcolor::g
float g
Green color component.
Definition helios_vector_types.h:1032
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::scale
void scale(float scale_factor)
Scale RGBcolor by some factor.
Definition helios_vector_types.h:910
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+ +
helios::Time::second
int second
Second of minute.
Definition helios_vector_types.h:1355
+
helios::Time::hour
int hour
Hour of day.
Definition helios_vector_types.h:1359
+
helios::Time::minute
int minute
Minute of hour.
Definition helios_vector_types.h:1357
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::int4
Vector of four elements of type 'int'.
Definition helios_vector_types.h:243
+
helios::int4::x
int x
First element in vector.
Definition helios_vector_types.h:247
+
helios::int4::z
int z
Third element in vector.
Definition helios_vector_types.h:251
+
helios::int4::w
int w
Fourth element in vector.
Definition helios_vector_types.h:253
+
helios::int4::y
int y
Second element in vector.
Definition helios_vector_types.h:249
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec4
Vector of four elements of type 'float'.
Definition helios_vector_types.h:673
+
helios::vec4::y
float y
Second element in vector.
Definition helios_vector_types.h:679
+
helios::vec4::w
float w
Fourth element in vector.
Definition helios_vector_types.h:683
+
helios::vec4::z
float z
Third element in vector.
Definition helios_vector_types.h:681
+
helios::vec4::x
float x
First element in vector.
Definition helios_vector_types.h:677
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_convert_p_l_y.html b/doc/html/_convert_p_l_y.html index 085f6e62e..5d2ea57f5 100644 --- a/doc/html/_convert_p_l_y.html +++ b/doc/html/_convert_p_l_y.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Converting polygon file formats to .ply using Blender
+
Converting polygon file formats to .ply using Blender

The following steps detail how to use Blender to convert various polygon file formats to .ply format. TurboSquid is a great place to find free 3D polygon models in many different formats. Note that in order to search only for free models, it is necessary to set the appropriate price range in the Price filter.

@@ -104,7 +116,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_dependent_software.html b/doc/html/_dependent_software.html index 669665583..fc567823c 100644 --- a/doc/html/_dependent_software.html +++ b/doc/html/_dependent_software.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Install and Set-up
+
Install and Set-up

Table of Contents

-

- + - -

+ +

This page will guide you through installation and set-up of dependent software needed to build and run Helios-based programs.

Which platform to use for Helios programming?

@@ -213,7 +262,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_dummy.html b/doc/html/_dummy.html index 1d94ae55b..b9fb61255 100644 --- a/doc/html/_dummy.html +++ b/doc/html/_dummy.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Dummy Model Plugin Documentation
+
Dummy Model Plugin Documentation

Table of Contents

-

@@ -103,7 +120,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_dummy_model_8cpp.html b/doc/html/_dummy_model_8cpp.html index e3e13a4a7..2aa861e24 100644 --- a/doc/html/_dummy_model_8cpp.html +++ b/doc/html/_dummy_model_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
DummyModel.cpp File Reference
@@ -102,7 +114,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_dummy_model_8cpp_source.html b/doc/html/_dummy_model_8cpp_source.html index bcdd63361..7e3955fde 100644 --- a/doc/html/_dummy_model_8cpp_source.html +++ b/doc/html/_dummy_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
DummyModel.cpp
@@ -95,6 +107,7 @@ Go to the documentation of this file.
1
5#include "DummyModel.h"
6
+
7DummyModel::DummyModel( helios::Context* __context ){
8 std::cout << "Initializing dummy model..." << std::flush;
9
@@ -102,7 +115,9 @@
11
12 std::cout << "done." << std::endl;
13}
+
14
+
15void DummyModel::run( void ){
16
17 std::cout << "Running dummy model..." << std::flush;
@@ -117,16 +132,18 @@
26
27 std::cout << "done." << std::endl;
28}
+
29
-
DummyModel::DummyModel
DummyModel(helios::Context *context)
Constructor.
Definition: DummyModel.cpp:7
-
DummyModel::run
void run(void)
Function to run the dummy model.
Definition: DummyModel.cpp:15
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition: Context.cpp:1759
+
DummyModel::DummyModel
DummyModel(helios::Context *context)
Constructor.
Definition DummyModel.cpp:7
+
DummyModel::run
void run(void)
Function to run the dummy model.
Definition DummyModel.cpp:15
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition Context.cpp:1759
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_dummy_model_8h.html b/doc/html/_dummy_model_8h.html index dd9f92295..17c70d58b 100644 --- a/doc/html/_dummy_model_8h.html +++ b/doc/html/_dummy_model_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Data Structures
@@ -111,7 +123,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_dummy_model_8h_source.html b/doc/html/_dummy_model_8h_source.html index 2e961b819..03110dfa7 100644 --- a/doc/html/_dummy_model_8h_source.html +++ b/doc/html/_dummy_model_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
DummyModel.h
@@ -96,10 +108,11 @@
5#include "Context.h"
6
8
+
9class DummyModel{
10public:
11
-
13 DummyModel( helios::Context* context );
+
13 DummyModel( helios::Context* context );
14
16 void run( void );
17
@@ -108,14 +121,17 @@
21 helios::Context* context;
22
23};
+
-
DummyModel
Dummy model class.
Definition: DummyModel.h:9
-
DummyModel::run
void run(void)
Function to run the dummy model.
Definition: DummyModel.cpp:15
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
+
DummyModel
Dummy model class.
Definition DummyModel.h:9
+
DummyModel::DummyModel
DummyModel(helios::Context *context)
Constructor.
Definition DummyModel.cpp:7
+
DummyModel::run
void run(void)
Function to run the dummy model.
Definition DummyModel.cpp:15
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_energy_balance_doc.html b/doc/html/_energy_balance_doc.html index 7b28fcf95..9e8debd39 100644 --- a/doc/html/_energy_balance_doc.html +++ b/doc/html/_energy_balance_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Energy Balance Model Plugin Documentation
+
Energy Balance Model Plugin Documentation

Table of Contents

-
@@ -136,13 +182,13 @@

Package
-td
+
-td
+
-td + NVIDIA CUDA 9.0+ Mac OSX:
$ brew install Caskroom/cask/cuda
Use CUDA installer Use CUDA installer @@ -281,7 +327,7 @@

energybalance.addRadiationBand("PAR");
energybalance.addRadiationBand("NIR");
energybalance.addRadiationBand("LW");
-
EnergyBalanceModel
Energy balance model class.
Definition: EnergyBalanceModel.h:23
+
EnergyBalanceModel
Energy balance model class.
Definition EnergyBalanceModel.h:23

Boundary-layer Conductance Model

The primitive boundary-layer conductance can either be set using the BLConductanceModel plug-in, or using the default model which is the Polhausen equation. Note also that custom conductance values can also be provided by setting the value of primitive data labeled 'boundarylayer_conductance', which overrides the computed model value.

@@ -340,10 +386,10 @@

return 0;
}
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503

Unsteady model with heat storage

Additional functions are available to run the unsteady energy balance model with heat storage. If the timestep argument "dt" is passed with value greater than 0, and the heat capacity $C_p$ is greater than 0, the unsteady energy balance equation will be applied with the heat storage term included. The equation is discretized in time using a forward Euler scheme in order to solve for the surface temperature at time $t+\Delta t$

@@ -397,12 +443,13 @@

return 0;
}
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_energy_balance_model_8cpp.html b/doc/html/_energy_balance_model_8cpp.html index 51167ef0a..648083d98 100644 --- a/doc/html/_energy_balance_model_8cpp.html +++ b/doc/html/_energy_balance_model_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
EnergyBalanceModel.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_energy_balance_model_8cpp_source.html b/doc/html/_energy_balance_model_8cpp_source.html index 7a6972cfe..b3a2bcfaa 100644 --- a/doc/html/_energy_balance_model_8cpp_source.html +++ b/doc/html/_energy_balance_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
EnergyBalanceModel.cpp
@@ -97,6 +109,7 @@
17
18using namespace helios;
19
+
20EnergyBalanceModel::EnergyBalanceModel( helios::Context* __context ){
21
22 //All default values set here
@@ -125,7 +138,9 @@
45 context = __context;
46
47}
+
48
+
49int EnergyBalanceModel::selfTest(){
50
51 std::cout << "Running energy balance model self-test..." << std::flush;
@@ -409,27 +424,37 @@
329 return 0;
330
331}
+
332
+
333void EnergyBalanceModel::enableMessages(){
334 message_flag = true;
335}
+
336
+
337void EnergyBalanceModel::disableMessages(){
338 message_flag = false;
339}
+
340
+
341void EnergyBalanceModel::addRadiationBand( const char* band ){
342 if( std::find(radiation_bands.begin(),radiation_bands.end(),band)==radiation_bands.end()) { //only add band if it doesn't exist
343 radiation_bands.emplace_back(band);
344 }
345}
+
346
+
347void EnergyBalanceModel::addRadiationBand( const std::vector<std::string> &bands ){
348 for( auto &band : bands ){
349 addRadiationBand(band.c_str());
350 }
351}
+
352
+
353void EnergyBalanceModel::optionalOutputPrimitiveData( const char* label ){
354
355 if( strcmp(label,"boundarylayer_conductance_out")==0 || strcmp(label,"vapor_pressure_deficit")==0 ){
@@ -439,11 +464,15 @@
359 }
360
361}
+
362
+
366
+
367void EnergyBalanceModel::printDefaultValueReport(const std::vector<uint> &UUIDs) const {
368
369 size_t assumed_default_TL = 0;
@@ -572,32 +601,34 @@
492 std::cout << "------------------------------------------------------" << std::endl;
493
494}
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
+
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
-
EnergyBalanceModel
Energy balance model class.
Definition: EnergyBalanceModel.h:23
-
EnergyBalanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition: EnergyBalanceModel.cpp:363
-
EnergyBalanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition: EnergyBalanceModel.cpp:333
-
EnergyBalanceModel::addRadiationBand
void addRadiationBand(const char *band)
Add the label of a radiation band in the RadiationModel plug-in that should be used in calculation of...
Definition: EnergyBalanceModel.cpp:341
-
EnergyBalanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: EnergyBalanceModel.cpp:353
-
EnergyBalanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: EnergyBalanceModel.cpp:337
-
EnergyBalanceModel::run
void run()
Function to run the energy balance model for all primitives in the Context.
Definition: EnergyBalanceModel.cu:118
-
EnergyBalanceModel::selfTest
int selfTest()
Self-test.
Definition: EnergyBalanceModel.cpp:49
-
EnergyBalanceModel::EnergyBalanceModel
EnergyBalanceModel(helios::Context *context)
Constructor.
Definition: EnergyBalanceModel.cpp:20
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
+
EnergyBalanceModel
Energy balance model class.
Definition EnergyBalanceModel.h:23
+
EnergyBalanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition EnergyBalanceModel.cpp:363
+
EnergyBalanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition EnergyBalanceModel.cpp:333
+
EnergyBalanceModel::addRadiationBand
void addRadiationBand(const char *band)
Add the label of a radiation band in the RadiationModel plug-in that should be used in calculation of...
Definition EnergyBalanceModel.cpp:341
+
EnergyBalanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition EnergyBalanceModel.cpp:353
+
EnergyBalanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition EnergyBalanceModel.cpp:337
+
EnergyBalanceModel::run
void run()
Function to run the energy balance model for all primitives in the Context.
Definition EnergyBalanceModel.cu:118
+ +
EnergyBalanceModel::EnergyBalanceModel
EnergyBalanceModel(helios::Context *context)
Constructor.
Definition EnergyBalanceModel.cpp:20
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_energy_balance_model_8cu.html b/doc/html/_energy_balance_model_8cu.html index 30ae2dc93..e0e6e048e 100644 --- a/doc/html/_energy_balance_model_8cu.html +++ b/doc/html/_energy_balance_model_8cu.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Macros | @@ -102,16 +114,16 @@ - +

Macros

#define CUDA_CHECK_ERROR(ans)   { gpuAssert((ans), __FILE__, __LINE__); }
#define CUDA_CHECK_ERROR(ans)
 
- + - + - +

Functions

void gpuAssert (cudaError_t code, const char *file, int line, bool abort=true)
void gpuAssert (cudaError_t code, const char *file, int line, bool abort=true)
 
__device__ float evaluateEnergyBalance (float T, float R, float Qother, float eps, float Ta, float ea, float pressure, float gH, float gS, uint Nsides, float stomatal_sidedness, float heatcapacity, float surfacehumidity, float dt, float Tprev)
__device__ float evaluateEnergyBalance (float T, float R, float Qother, float eps, float Ta, float ea, float pressure, float gH, float gS, uint Nsides, float stomatal_sidedness, float heatcapacity, float surfacehumidity, float dt, float Tprev)
 
__global__ void solveEnergyBalance (uint Nprimitives, float *To, float *R, float *Qother, float *eps, float *Ta, float *ea, float *pressure, float *gH, float *gS, uint *Nsides, float *stomatal_sidedness, float *TL, float *heatcapacity, float *surfacehumidity, float dt)
__global__ void solveEnergyBalance (uint Nprimitives, float *To, float *R, float *Qother, float *eps, float *Ta, float *ea, float *pressure, float *gH, float *gS, uint *Nsides, float *stomatal_sidedness, float *TL, float *heatcapacity, float *surfacehumidity, float dt)
 

Detailed Description

@@ -131,13 +143,13 @@

#define CUDA_CHECK_ERROR ( -   - ans) -    { gpuAssert((ans), __FILE__, __LINE__); } + ans) +

- +Value:
{ gpuAssert((ans), __FILE__, __LINE__); }
+

Definition at line 22 of file EnergyBalanceModel.cu.

@@ -152,97 +164,77 @@

__device__ float evaluateEnergyBalance ( - float  - T, + float T, - float  - R, + float R, - float  - Qother, + float Qother, - float  - eps, + float eps, - float  - Ta, + float Ta, - float  - ea, + float ea, - float  - pressure, + float pressure, - float  - gH, + float gH, - float  - gS, + float gS, - uint  - Nsides, + uint Nsides, - float  - stomatal_sidedness, + float stomatal_sidedness, - float  - heatcapacity, + float heatcapacity, - float  - surfacehumidity, + float surfacehumidity, - float  - dt, + float dt, - float  - Tprev  - - - - ) - + float Tprev )

@@ -263,31 +255,22 @@

void gpuAssert ( - cudaError_t  - code, + cudaError_t code, - const char *  - file, + const char * file, - int  - line, + int line, - bool  - abort = true  - - - - ) - + bool abort = true ) @@ -310,103 +293,82 @@

__global__ void solveEnergyBalance ( - uint  - Nprimitives, + uint Nprimitives, - float *  - To, + float * To, - float *  - R, + float * R, - float *  - Qother, + float * Qother, - float *  - eps, + float * eps, - float *  - Ta, + float * Ta, - float *  - ea, + float * ea, - float *  - pressure, + float * pressure, - float *  - gH, + float * gH, - float *  - gS, + float * gS, - uint *  - Nsides, + uint * Nsides, - float *  - stomatal_sidedness, + float * stomatal_sidedness, - float *  - TL, + float * TL, - float *  - heatcapacity, + float * heatcapacity, - float *  - surfacehumidity, + float * surfacehumidity, - float  - dt  - - - - ) - + float dt )

@@ -418,7 +380,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_energy_balance_model_8cu_source.html b/doc/html/_energy_balance_model_8cu_source.html index 3d8437712..ec4af80df 100644 --- a/doc/html/_energy_balance_model_8cu_source.html +++ b/doc/html/_energy_balance_model_8cu_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
EnergyBalanceModel.cu
@@ -195,19 +207,26 @@
115
116}
117
+
118void EnergyBalanceModel::run(){
119 run( context->getAllUUIDs() );
120}
+
121
+
122void EnergyBalanceModel::run( float dt ){
123 run( context->getAllUUIDs(), dt );
124}
+
125
+
126void EnergyBalanceModel::run( const std::vector<uint> &UUIDs ){
127 run( UUIDs, 0.f);
128}
+
129
130
+
131void EnergyBalanceModel::run( const std::vector<uint> &UUIDs, float dt ){
132
133 if( message_flag ){
@@ -593,25 +612,27 @@
513 }
514
515}
+
516
517
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
-
EnergyBalanceModel::run
void run()
Function to run the energy balance model for all primitives in the Context.
Definition: EnergyBalanceModel.cu:118
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition: Context.cpp:7920
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
+
EnergyBalanceModel::run
void run()
Function to run the energy balance model for all primitives in the Context.
Definition EnergyBalanceModel.cu:118
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition Context.cpp:7920
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_energy_balance_model_8h.html b/doc/html/_energy_balance_model_8h.html index 303e63c12..86965c5e7 100644 --- a/doc/html/_energy_balance_model_8h.html +++ b/doc/html/_energy_balance_model_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -114,7 +126,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_energy_balance_model_8h_source.html b/doc/html/_energy_balance_model_8h_source.html index b57c11c64..c2dbdd94f 100644 --- a/doc/html/_energy_balance_model_8h_source.html +++ b/doc/html/_energy_balance_model_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
EnergyBalanceModel.h
@@ -99,11 +111,12 @@
19#include "Context.h"
20
22
+
23class EnergyBalanceModel{
24public:
25
27
-
30 EnergyBalanceModel( helios::Context* context );
+
30 EnergyBalanceModel( helios::Context* context );
31
33
36 int selfTest();
@@ -166,22 +179,25 @@
131 std::vector<std::string> output_prim_data;
132
133};
+
134
135#endif
-
EnergyBalanceModel
Energy balance model class.
Definition: EnergyBalanceModel.h:23
-
EnergyBalanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition: EnergyBalanceModel.cpp:363
-
EnergyBalanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition: EnergyBalanceModel.cpp:333
-
EnergyBalanceModel::addRadiationBand
void addRadiationBand(const char *band)
Add the label of a radiation band in the RadiationModel plug-in that should be used in calculation of...
Definition: EnergyBalanceModel.cpp:341
-
EnergyBalanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: EnergyBalanceModel.cpp:353
-
EnergyBalanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: EnergyBalanceModel.cpp:337
-
EnergyBalanceModel::run
void run()
Function to run the energy balance model for all primitives in the Context.
Definition: EnergyBalanceModel.cu:118
-
EnergyBalanceModel::selfTest
int selfTest()
Self-test.
Definition: EnergyBalanceModel.cpp:49
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
+
EnergyBalanceModel
Energy balance model class.
Definition EnergyBalanceModel.h:23
+
EnergyBalanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition EnergyBalanceModel.cpp:363
+
EnergyBalanceModel::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition EnergyBalanceModel.cpp:333
+
EnergyBalanceModel::addRadiationBand
void addRadiationBand(const char *band)
Add the label of a radiation band in the RadiationModel plug-in that should be used in calculation of...
Definition EnergyBalanceModel.cpp:341
+
EnergyBalanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition EnergyBalanceModel.cpp:353
+
EnergyBalanceModel::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition EnergyBalanceModel.cpp:337
+
EnergyBalanceModel::run
void run()
Function to run the energy balance model for all primitives in the Context.
Definition EnergyBalanceModel.cu:118
+ +
EnergyBalanceModel::EnergyBalanceModel
EnergyBalanceModel(helios::Context *context)
Constructor.
Definition EnergyBalanceModel.cpp:20
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_i_o.html b/doc/html/_i_o.html index 1d1a9d005..b531ef0ff 100644 --- a/doc/html/_i_o.html +++ b/doc/html/_i_o.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
File Input/Output
+
File Input/Output
A very important note with regard to File Input/Output is that all file paths need to be given with respect to the current build directory or as absolute paths.

@@ -106,33 +118,33 @@ Primitive TypeCode Sample Patch
 <patch>
-     <center>0 0 0</center>
-     <size>1 1</size>
-     <rotation>0 0</rotation> <!-- OPTIONAL -->
-     <color>1 0 0</color> <!-- OPTIONAL -->
-     <texture>"grass.jpg"</texture> <!-- OPTIONAL -->
-  </patch>
+ <center>0 0 0</center> + <size>1 1</size> + <rotation>0 0</rotation> <!-- OPTIONAL --> + <color>1 0 0</color> <!-- OPTIONAL --> + <texture>"grass.jpg"</texture> <!-- OPTIONAL --> + </patch>

Triangle
 <triangle>
-     <vertex>0 0 0</vertex>
-     <vertex>1 0 0</vertex>
-     <vertex>1 1 0</vertex>
-     <color>1 0 0</color>
-  </triangle>
+ <vertex>0 0 0</vertex> + <vertex>1 0 0</vertex> + <vertex>1 1 0</vertex> + <color>1 0 0</color> + </triangle>
Disk
 <disk>
-     <center>0 0 0</center>
-     <size>1 1</size>
-     <rotation>0 0</rotation>
-     <color>1 0 0</color>
-     <texture>"grass.jpg"</texture>
-  </disk>
+ <center>0 0 0</center> + <size>1 1</size> + <rotation>0 0</rotation> + <color>1 0 0</color> + <texture>"grass.jpg"</texture> + </disk>
Voxel
 <voxel>
-     <center>0 0 0</center>
-     <size>1 1 1</size>
-     <color>1 0 0</color>
-  </voxel>
+ <center>0 0 0</center> + <size>1 1 1</size> + <color>1 0 0</color> + </voxel>

Adding Timeseries Data

@@ -211,11 +223,11 @@

}
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::loadTabularTimeseriesData
void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
Load tabular weather data from text file into timeseries.
Definition: Context_fileIO.cpp:4552
-
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition: Context.cpp:1894
- - +
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::loadTabularTimeseriesData
void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
Load tabular weather data from text file into timeseries.
Definition Context_fileIO.cpp:4552
+
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition Context.cpp:1894
+ +

The above example would read the comma-delimited file "../input/weatherfile.csv". Timeseries data would be added to the Context for values of "temperature", which could be queried based on this label.

Reading XML Files

@@ -229,7 +241,7 @@

context.loadXML( "file.xml" );
}
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217

Reading Standard Polygon File Formats

@@ -257,10 +269,10 @@

context.loadPLY( "file.ply", origin, scale, rotation, color );
}
-
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition: Context_fileIO.cpp:3378
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition Context_fileIO.cpp:3378
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503

There are other forms of the loadPLY function that allow for translation, rotation, and scaling of the entire PLY model.

Different applications may utilize different coordinate axes in .ply files. In computer graphics applications, it is common to define the y-axis as the up direction. Helios uses a z-up coordinate system. By default helios::Context::loadPLY() assumes that the coordinate system used when creating the .ply file is y-up. There is an optional argument helios::Context::loadPLY() that can allow you to easily define the up-axis.

The Blender software package (www.blender.org) can easily modify and convert most polygon file formats to .ply format. This page gives a tutorial on how to perform such conversions using Blender.

@@ -298,7 +310,7 @@

context.loadOBJ("relative/path/to/someobjfile.obj", make_vec3(0,0,0), 0, nullrotation, RGB::red );
}
-
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition: Context_fileIO.cpp:3742
+
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition Context_fileIO.cpp:3742

Writing PLY (Stanford Polygon) Files

The Context has analogous files for writing PLY files based on the geometry currently loaded in the Context. This is accomplished via the writePLY() command, as illustrated below.

@@ -314,8 +326,8 @@

context.writePLY( "file.ply" );
}
-
helios::Context::writePLY
void writePLY(const char *filename) const
Write geometry in the Context to a Stanford polygon file (.ply)
Definition: Context_fileIO.cpp:3678
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
+
helios::Context::writePLY
void writePLY(const char *filename) const
Write geometry in the Context to a Stanford polygon file (.ply)
Definition Context_fileIO.cpp:3678
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212

Writing OBJ (Wavefront) Files

Writing Wavefront OBJ files is similar to writing a PLY file, except that it will produce both a .obj file containing the geometry, and a .mtl file defining materials (colors, texture masks). For this reason, only the base file name with no extension is provided to the function.

@@ -332,7 +344,7 @@

context.writeOBJ( "file" );
}
-
helios::Context::writeOBJ
void writeOBJ(const std::string &filename) const
Write geometry in the Context to a Wavefront file (.obj)
Definition: Context_fileIO.cpp:4131
+
helios::Context::writeOBJ
void writeOBJ(const std::string &filename) const
Write geometry in the Context to a Wavefront file (.obj)
Definition Context_fileIO.cpp:4131

Exporting Project to XML File Format

All geometry and global/primitive data loaded into the Context can be written to an XML file using the writeXML() function, which can be later read back in using the loadXML(). This functionality can be used to save progress during a simulation run, or to ensure that consistent geometry is always used across simulation runs, among other things.

@@ -351,8 +363,8 @@

context.writeXML( "file.xml" );
}
-
helios::Context::writeXML
void writeXML(const char *filename, bool quiet=false) const
Write Context geometry and data to XML file for all UUIDs in the context.
Definition: Context_fileIO.cpp:2658
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
+
helios::Context::writeXML
void writeXML(const char *filename, bool quiet=false) const
Write Context geometry and data to XML file for all UUIDs in the context.
Definition Context_fileIO.cpp:2658
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655

and later read back into a new simulation:

#include "Context.h"
using namespace helios;
@@ -385,13 +397,14 @@

context.writePrimitiveData( "file.txt", columns );
}
-
helios::Context::writePrimitiveData
void writePrimitiveData(std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
Write primitive data to an ASCII text file for all primitives in the Context.
Definition: Context_fileIO.cpp:4473
+
helios::Context::writePrimitiveData
void writePrimitiveData(std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
Write primitive data to an ASCII text file for all primitives in the Context.
Definition Context_fileIO.cpp:4473

By default, column header labels will not be written, but if the optional third argument is set as "true" the label of the primitive data for each column will be written to the first line of the file.

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_input_output_8cpp.html b/doc/html/_input_output_8cpp.html index 6fe30f008..c1dd8ab80 100644 --- a/doc/html/_input_output_8cpp.html +++ b/doc/html/_input_output_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Functions
@@ -100,7 +112,7 @@ - +

Functions

size_t findShootClosingBracket (const std::string &lstring)
size_t findShootClosingBracket (const std::string &lstring)
 

Detailed Description

@@ -120,8 +132,7 @@

size_t findShootClosingBracket ( - const std::string &  - lstring) + const std::string & lstring) @@ -134,7 +145,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_input_output_8cpp_source.html b/doc/html/_input_output_8cpp_source.html index d58dc2741..0f7783e5c 100644 --- a/doc/html/_input_output_8cpp_source.html +++ b/doc/html/_input_output_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
InputOutput.cpp
@@ -823,36 +835,37 @@
743
744}
-
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition: PlantArchitecture.cpp:2613
-
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition: PlantArchitecture.cpp:1980
-
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition: PlantArchitecture.cpp:2059
-
PlantArchitecture::getCurrentShootParameters
std::map< std::string, ShootParameters > getCurrentShootParameters()
Get the shoot parameters structure for all shoot types in the current plant model.
Definition: PlantLibrary.cpp:99
-
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition: PlantArchitecture.cpp:1905
-
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition: PlantArchitecture.cpp:247
-
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition: Context.cpp:49
-
helios::parse_xml_tag_float
float parse_xml_tag_float(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing a float value.
Definition: global.cpp:954
-
helios::parse_xml_tag_vec3
vec3 parse_xml_tag_vec3(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
Definition: global.cpp:978
-
helios::getFileExtension
std::string getFileExtension(const std::string &filepath)
Parse a file string to get the extension.
Definition: global.cpp:3075
-
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition: global.cpp:3102
-
helios::getFileName
std::string getFileName(const std::string &filepath)
Parse a file string to get the filename including extension.
Definition: global.cpp:3085
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::parse_xml_tag_string
std::string parse_xml_tag_string(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing a string.
Definition: global.cpp:990
-
helios::parse_xml_tag_int
int parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing an integer value.
Definition: global.cpp:942
-
helios::rad2deg
float rad2deg(float rad)
Convert radians to degrees.
Definition: global.cpp:580
-
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition: global.cpp:576
-
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition: global.cpp:1146
- - -
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition: PlantArchitecture.h:640
- -
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition PlantArchitecture.cpp:2613
+
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition PlantArchitecture.cpp:1980
+
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition PlantArchitecture.cpp:2059
+
PlantArchitecture::getCurrentShootParameters
std::map< std::string, ShootParameters > getCurrentShootParameters()
Get the shoot parameters structure for all shoot types in the current plant model.
Definition PlantLibrary.cpp:99
+
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition PlantArchitecture.cpp:1905
+
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition PlantArchitecture.cpp:247
+
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition Context.cpp:49
+
helios::parse_xml_tag_float
float parse_xml_tag_float(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing a float value.
Definition global.cpp:954
+
helios::parse_xml_tag_vec3
vec3 parse_xml_tag_vec3(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
Definition global.cpp:978
+
helios::getFileExtension
std::string getFileExtension(const std::string &filepath)
Parse a file string to get the extension.
Definition global.cpp:3075
+
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition global.cpp:3102
+
helios::getFileName
std::string getFileName(const std::string &filepath)
Parse a file string to get the filename including extension.
Definition global.cpp:3085
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::parse_xml_tag_string
std::string parse_xml_tag_string(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing a string.
Definition global.cpp:990
+
helios::parse_xml_tag_int
int parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
Parse an XML tag containing an integer value.
Definition global.cpp:942
+
helios::rad2deg
float rad2deg(float rad)
Convert radians to degrees.
Definition global.cpp:580
+
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition global.cpp:576
+
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition global.cpp:1146
+ + +
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition PlantArchitecture.h:640
+ +
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_leaf_optics_8cpp.html b/doc/html/_leaf_optics_8cpp.html index e3372fbb0..3c731bcb9 100644 --- a/doc/html/_leaf_optics_8cpp.html +++ b/doc/html/_leaf_optics_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
LeafOptics.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_leaf_optics_8cpp_source.html b/doc/html/_leaf_optics_8cpp_source.html index e14154a33..c5893fd1f 100644 --- a/doc/html/_leaf_optics_8cpp_source.html +++ b/doc/html/_leaf_optics_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
LeafOptics.cpp
@@ -97,6 +109,7 @@
17using namespace std;
18using namespace helios;
19
+
20LeafOptics::LeafOptics( helios::Context* a_context ){
21 if( message_flag ){
22 std::cout << "Initializing LeafOptics model..." << std::flush;
@@ -237,7 +250,9 @@
157 std::cout << "done." << std::endl;
158 }
159}
+
160
+
161int LeafOptics::selfTest(){
162
163 Context context_test;
@@ -252,7 +267,9 @@
172 return 0;
173
174}
+
175
+
176void LeafOptics::run(const std::vector<uint> &UUIDs , const LeafOpticsProperties &leafproperties, const std::string &label) {
177 std::vector<vec2> reflectivities_fit;
178 std::vector<vec2> transmissivities_fit;
@@ -267,7 +284,9 @@
187 context->setPrimitiveData( UUIDs, "transmissivity_spectrum", leaf_transmissivity_label);
188 setProperties(UUIDs, leafproperties);
189}
+
190
+
191void LeafOptics::run(const LeafOpticsProperties &leafproperties, const std::string &label) {
192 std::vector<vec2> reflectivities_fit;
193 std::vector<vec2> transmissivities_fit;
@@ -279,8 +298,10 @@
199 context->setGlobalData(leaf_transmissivity_label.c_str(),HELIOS_TYPE_VEC2,transmissivities_fit.size(),&transmissivities_fit[0]);
200
201}
+
202
203
+
204void LeafOptics::PROSPECT(float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments,
205 float watermass, float drymass, float protein, float carbonconstituents, std::vector<float> &reflectivities_fit, std::vector<float> &transmissivities_fit)
206// Implementation of Prospect-PRO, port of public available matlab code
@@ -348,7 +369,9 @@
268 reflectivities_fit.push_back(Ra + Ta * Rsub * t / denom); //(euqation7 in RPOSPECT)
269 }
270}
+
271
+
272void LeafOptics::getLeafSpectra(const LeafOpticsProperties &leafproperties, std::vector<helios::vec2> &reflectivities_fit, std::vector<helios::vec2> &transmissivities_fit) {
273
274 std::vector<float> reflectivities_fit_y, transmissivities_fit_y;
@@ -381,6 +404,7 @@
301 }
302
303}
+
304
305void LeafOptics::surface(float degree, std::vector<float> &reflectivities)
308{
@@ -455,6 +479,7 @@
380 return 0.0;
381}
382
+
383void LeafOptics::setProperties(const std::vector<uint> &UUIDs, const LeafOpticsProperties &leafproperties) {
384
385 context->setPrimitiveData(UUIDs, "chlorophyll", leafproperties.chlorophyllcontent);
@@ -472,39 +497,45 @@
397 context->setPrimitiveData(UUIDs, "cellulose", leafproperties.carbonconstituents);
398 }
399}
+
400
+
401void LeafOptics::disableMessages(){
402 message_flag = false;
403}
+
404
+
405void LeafOptics::enableMessages(){
406 message_flag = true;
407}
+
408
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
- -
LeafOptics::selfTest
static int selfTest()
Self-test.
Definition: LeafOptics.cpp:161
-
LeafOptics::getLeafSpectra
void getLeafSpectra(const LeafOpticsProperties &leafproperties, std::vector< helios::vec2 > &reflectivities_fit, std::vector< helios::vec2 > &transmissivities_fit)
Get the leaf spectra.
Definition: LeafOptics.cpp:272
-
LeafOptics::run
void run(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties, const std::string &label)
Run the LeafOptics model to generate reflectivity and transmissivity spectra, create associated globa...
Definition: LeafOptics.cpp:176
-
LeafOptics::PROSPECT
void PROSPECT(float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments, float watermass, float drymass, float protein, float carbonconstituents, std::vector< float > &reflectivities_fit, std::vector< float > &transmissivities_fit)
LeafOptics model kernel.
Definition: LeafOptics.cpp:204
-
LeafOptics::LeafOptics
LeafOptics(helios::Context *a_context)
Constructor.
Definition: LeafOptics.cpp:20
-
LeafOptics::enableMessages
void enableMessages()
Enable command-line output messages from this plug-in.
Definition: LeafOptics.cpp:405
-
LeafOptics::setProperties
void setProperties(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties)
Set leaf optical properties for a set of primitives.
Definition: LeafOptics.cpp:383
-
LeafOptics::disableMessages
void disableMessages()
Disable command-line output messages from this plug-in.
Definition: LeafOptics.cpp:401
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
-
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition: Context_data.cpp:4533
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition: Context_data.cpp:3844
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
LeafOpticsProperties
LeafOptics model class.
Definition: LeafOptics.h:21
+ +
LeafOptics::selfTest
static int selfTest()
Self-test.
Definition LeafOptics.cpp:161
+
LeafOptics::getLeafSpectra
void getLeafSpectra(const LeafOpticsProperties &leafproperties, std::vector< helios::vec2 > &reflectivities_fit, std::vector< helios::vec2 > &transmissivities_fit)
Get the leaf spectra.
Definition LeafOptics.cpp:272
+
LeafOptics::run
void run(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties, const std::string &label)
Run the LeafOptics model to generate reflectivity and transmissivity spectra, create associated globa...
Definition LeafOptics.cpp:176
+
LeafOptics::PROSPECT
void PROSPECT(float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments, float watermass, float drymass, float protein, float carbonconstituents, std::vector< float > &reflectivities_fit, std::vector< float > &transmissivities_fit)
LeafOptics model kernel.
Definition LeafOptics.cpp:204
+
LeafOptics::LeafOptics
LeafOptics(helios::Context *a_context)
Constructor.
Definition LeafOptics.cpp:20
+
LeafOptics::enableMessages
void enableMessages()
Enable command-line output messages from this plug-in.
Definition LeafOptics.cpp:405
+
LeafOptics::setProperties
void setProperties(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties)
Set leaf optical properties for a set of primitives.
Definition LeafOptics.cpp:383
+
LeafOptics::disableMessages
void disableMessages()
Disable command-line output messages from this plug-in.
Definition LeafOptics.cpp:401
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217
+
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition Context_data.cpp:4533
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition Context_data.cpp:3844
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
LeafOpticsProperties
LeafOptics model class.
Definition LeafOptics.h:21
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_leaf_optics_8h.html b/doc/html/_leaf_optics_8h.html index 2f7070b02..76fc40417 100644 --- a/doc/html/_leaf_optics_8h.html +++ b/doc/html/_leaf_optics_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -116,7 +128,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_leaf_optics_8h_source.html b/doc/html/_leaf_optics_8h_source.html index 026cc89ba..5336f663d 100644 --- a/doc/html/_leaf_optics_8h_source.html +++ b/doc/html/_leaf_optics_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
LeafOptics.h
@@ -96,6 +108,7 @@
16#include "Context.h"
17
19
+
21struct LeafOpticsProperties{
22
23 float numberlayers = 1.5;
@@ -120,11 +133,13 @@
42 float carbonconstituents): chlorophyllcontent(chlorophyllcontent), carotenoidcontent(carotenoidcontent),
43 anthocyancontent(anthocyancontent), watermass(watermass), drymass(drymass), protein(protein), carbonconstituents(carbonconstituents){}
44};
+
45
+
46class LeafOptics{
47public:
48
-
50 LeafOptics( helios::Context* a_context );
+
50 LeafOptics( helios::Context* a_context );
51
53
56 static int selfTest();
@@ -181,21 +196,24 @@
142 bool message_flag = true;
143
144};
+
- -
LeafOptics::selfTest
static int selfTest()
Self-test.
Definition: LeafOptics.cpp:161
-
LeafOptics::getLeafSpectra
void getLeafSpectra(const LeafOpticsProperties &leafproperties, std::vector< helios::vec2 > &reflectivities_fit, std::vector< helios::vec2 > &transmissivities_fit)
Get the leaf spectra.
Definition: LeafOptics.cpp:272
-
LeafOptics::run
void run(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties, const std::string &label)
Run the LeafOptics model to generate reflectivity and transmissivity spectra, create associated globa...
Definition: LeafOptics.cpp:176
-
LeafOptics::PROSPECT
void PROSPECT(float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments, float watermass, float drymass, float protein, float carbonconstituents, std::vector< float > &reflectivities_fit, std::vector< float > &transmissivities_fit)
LeafOptics model kernel.
Definition: LeafOptics.cpp:204
-
LeafOptics::enableMessages
void enableMessages()
Enable command-line output messages from this plug-in.
Definition: LeafOptics.cpp:405
-
LeafOptics::setProperties
void setProperties(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties)
Set leaf optical properties for a set of primitives.
Definition: LeafOptics.cpp:383
-
LeafOptics::disableMessages
void disableMessages()
Disable command-line output messages from this plug-in.
Definition: LeafOptics.cpp:401
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
LeafOpticsProperties
LeafOptics model class.
Definition: LeafOptics.h:21
+ +
LeafOptics::selfTest
static int selfTest()
Self-test.
Definition LeafOptics.cpp:161
+
LeafOptics::getLeafSpectra
void getLeafSpectra(const LeafOpticsProperties &leafproperties, std::vector< helios::vec2 > &reflectivities_fit, std::vector< helios::vec2 > &transmissivities_fit)
Get the leaf spectra.
Definition LeafOptics.cpp:272
+
LeafOptics::run
void run(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties, const std::string &label)
Run the LeafOptics model to generate reflectivity and transmissivity spectra, create associated globa...
Definition LeafOptics.cpp:176
+
LeafOptics::PROSPECT
void PROSPECT(float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments, float watermass, float drymass, float protein, float carbonconstituents, std::vector< float > &reflectivities_fit, std::vector< float > &transmissivities_fit)
LeafOptics model kernel.
Definition LeafOptics.cpp:204
+
LeafOptics::LeafOptics
LeafOptics(helios::Context *a_context)
Constructor.
Definition LeafOptics.cpp:20
+
LeafOptics::enableMessages
void enableMessages()
Enable command-line output messages from this plug-in.
Definition LeafOptics.cpp:405
+
LeafOptics::setProperties
void setProperties(const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties)
Set leaf optical properties for a set of primitives.
Definition LeafOptics.cpp:383
+
LeafOptics::disableMessages
void disableMessages()
Disable command-line output messages from this plug-in.
Definition LeafOptics.cpp:401
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
LeafOpticsProperties
LeafOptics model class.
Definition LeafOptics.h:21
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_li_d_a_r_8cpp.html b/doc/html/_li_d_a_r_8cpp.html index ddb882b20..0ff4effdb 100644 --- a/doc/html/_li_d_a_r_8cpp.html +++ b/doc/html/_li_d_a_r_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Functions
@@ -100,9 +112,9 @@ - + - +

Functions

bool sortcol0 (const std::vector< double > &v0, const std::vector< double > &v1)
bool sortcol0 (const std::vector< double > &v0, const std::vector< double > &v1)
 
bool sortcol1 (const std::vector< double > &v0, const std::vector< double > &v1)
bool sortcol1 (const std::vector< double > &v0, const std::vector< double > &v1)
 

Detailed Description

@@ -122,19 +134,12 @@

bool sortcol0 ( - const std::vector< double > &  - v0, + const std::vector< double > & v0, - const std::vector< double > &  - v1  - - - - ) - + const std::vector< double > & v1 )

@@ -152,19 +157,12 @@

bool sortcol1 ( - const std::vector< double > &  - v0, + const std::vector< double > & v0, - const std::vector< double > &  - v1  - - - - ) - + const std::vector< double > & v1 )

@@ -176,7 +174,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_li_d_a_r_8cpp_source.html b/doc/html/_li_d_a_r_8cpp_source.html index aaaae558d..cd12887e7 100644 --- a/doc/html/_li_d_a_r_8cpp_source.html +++ b/doc/html/_li_d_a_r_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
LiDAR.cpp
@@ -98,6 +110,7 @@
18using namespace std;
19using namespace helios;
20
+
21ScanMetadata::ScanMetadata(){
22
23 origin = make_vec3(0,0,0);
@@ -114,6 +127,7 @@
34 data_file = "";
35
36}
+
37
38ScanMetadata::ScanMetadata(const vec3 &a_origin, uint a_Ntheta, float a_thetaMin, float a_thetaMax, uint a_Nphi, float a_phiMin, float a_phiMax, float a_exitDiameter, float a_beamDivergence,
39 const vector<string> &a_columnFormat){
@@ -134,6 +148,7 @@
54
55}
56
+
57helios::SphericalCoord ScanMetadata::rc2direction(uint row, uint column ) const{
58
59 float zenith = thetaMin + (thetaMax-thetaMin)/float(Ntheta)*float(row);
@@ -142,7 +157,9 @@
62 return make_SphericalCoord(1,elevation,phi);
63
64};
+
65
+
66helios::int2 ScanMetadata::direction2rc(const SphericalCoord &direction ) const{
67
68 float theta = direction.zenith;
@@ -165,7 +182,9 @@
85 return helios::make_int2(row,column);
86
87};
+
88
+
89LiDARcloud::LiDARcloud() {
90
91 Nhits=0;
@@ -174,16 +193,21 @@
94 printmessages = true;
95
96}
+
97
98LiDARcloud::~LiDARcloud( void )= default;
99
+
100void LiDARcloud::disableMessages() {
101 printmessages = false;
102}
+
103
+
104void LiDARcloud::enableMessages() {
105 printmessages = true;
106}
+
107
108void LiDARcloud::validateRayDirections() {
109
@@ -212,10 +236,13 @@
132
133}
134
+
135uint LiDARcloud::getScanCount() {
136 return scans.size();
137}
+
138
+
139uint LiDARcloud::addScan(ScanMetadata &newscan ){
140
141 float epsilon = 1e-5;
@@ -247,7 +274,9 @@
167 return scans.size()-1;
168
169}
+
170
+
171void LiDARcloud::addHitPoint(uint scanID, const vec3 &xyz, const SphericalCoord &direction ){
172
173 //default color
@@ -259,6 +288,7 @@
179 addHitPoint( scanID, xyz, direction, color, data );
180
181}
+
182
183void LiDARcloud::addHitPoint(uint scanID, const vec3 &xyz,
184 const SphericalCoord &direction,
@@ -271,6 +301,7 @@
191
192}
193
+
194void LiDARcloud::addHitPoint(uint scanID, const vec3 &xyz,
195 const SphericalCoord &direction,
196 const RGBcolor &color ){
@@ -281,6 +312,7 @@
201 addHitPoint( scanID, xyz, direction, color, data );
202
203}
+
204
205void LiDARcloud::addHitPoint(uint scanID, const vec3 &xyz,
206 const SphericalCoord &direction,
@@ -314,6 +346,7 @@
234
235}
236
+
237void LiDARcloud::deleteHitPoint(uint index ){
238
239 if( index>=hits.size() ){
@@ -330,67 +363,87 @@
250 hits.pop_back();
251
252}
+
253
+
254uint LiDARcloud::getHitCount() const{
255 return hits.size();
256}
+
257
+
258helios::vec3 LiDARcloud::getScanOrigin(uint scanID ) const{
259 if( scanID>=scans.size() ){
260 helios_runtime_error("ERROR (LiDARcloud::getScanOrigin): Cannot get origin of scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
261 }
262 return scans.at(scanID).origin;
263}
+
264
+
265uint LiDARcloud::getScanSizeTheta(uint scanID ) const{
266 if( scanID>=scans.size() ){
267 helios_runtime_error("ERROR (LiDARcloud::getScanSizeTheta): Cannot get theta size for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
268 }
269 return scans.at(scanID).Ntheta;
270}
+
271
+
272uint LiDARcloud::getScanSizePhi(uint scanID ) const{
273 if( scanID>=scans.size() ){
274 helios_runtime_error("ERROR (LiDARcloud::getScanSizePhi): Cannot get phi size for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
275 }
276 return scans.at(scanID).Nphi;
277}
+
278
+
279helios::vec2 LiDARcloud::getScanRangeTheta(uint scanID ) const{
280 if( scanID>=scans.size() ){
281 helios_runtime_error("ERROR (LiDARcloud::getScanRangeTheta): Cannot get theta range for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
282 }
283 return helios::make_vec2(scans.at(scanID).thetaMin,scans.at(scanID).thetaMax);
284}
+
285
+
286helios::vec2 LiDARcloud::getScanRangePhi(uint scanID ) const{
287 if( scanID>=scans.size() ){
288 helios_runtime_error("ERROR (LiDARcloud::getScanRangePhi): Cannot get phi range for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
289 }
290 return helios::make_vec2(scans.at(scanID).phiMin,scans.at(scanID).phiMax);
291}
+
292
+
293float LiDARcloud::getScanBeamExitDiameter(uint scanID ) const{
294 if( scanID>=scans.size() ){
295 helios_runtime_error("ERROR (LiDARcloud::getScanBeamExitDiameter): Cannot get exit diameter for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
296 }
297 return scans.at(scanID).exitDiameter;
298}
+
299
+
300float LiDARcloud::getScanBeamDivergence(uint scanID ) const{
301 if( scanID>=scans.size() ){
302 helios_runtime_error("ERROR (LiDARcloud::getScanBeamDivergence): Cannot get beam divergence for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
303 }
304 return scans.at(scanID).beamDivergence;
305}
+
306
+
307std::vector<std::string> LiDARcloud::getScanColumnFormat(uint scanID ) const{
308 if( scanID>=scans.size() ){
309 helios_runtime_error("ERROR (LiDARcloud::getScanColumnFormat): Cannot get column format for scan #" + std::to_string(scanID) + " because there have only been " + std::to_string(scans.size()) + " scans added.");
310 }
311 return scans.at(scanID).columnFormat;
312}
+
313
+
314helios::vec3 LiDARcloud::getHitXYZ( uint index ) const{
315
316 if( index>=hits.size() ){
@@ -400,7 +453,9 @@
320 return hits.at(index).position;
321
322}
+
323
+
324helios::SphericalCoord LiDARcloud::getHitRaydir(uint index ) const{
325
326 if( index>=hits.size() ){
@@ -411,7 +466,9 @@
331 return cart2sphere( direction_cart );
332
333}
+
334
+
335void LiDARcloud::setHitData(uint index, const char* label, double value ){
336
337 if( index>=hits.size() ){
@@ -421,7 +478,9 @@
341 hits.at(index).data[label] = value;
342
343}
+
344
+
345double LiDARcloud::getHitData(uint index, const char* label ) const{
346
347 if( index>=hits.size() ){
@@ -436,7 +495,9 @@
356 return hit_data.at(label);
357
358}
+
359
+
360bool LiDARcloud::doesHitDataExist(uint index, const char* label ) const{
361
362 if( index>=hits.size() ){
@@ -451,7 +512,9 @@
371 }
372
373}
+
374
+
375RGBcolor LiDARcloud::getHitColor(uint index ) const{
376
377 if( index>=hits.size() ){
@@ -461,7 +524,9 @@
381 return hits.at(index).color;
382
383}
+
384
+
385int LiDARcloud::getHitScanID(uint index ) const{
386
387 if( index>=hits.size() ){
@@ -471,7 +536,9 @@
391 return hits.at(index).scanID;
392
393}
+
394
+
395int LiDARcloud::getHitIndex(uint scanID, uint row, uint column ) const{
396
397 if( scanID>=scans.size() ){
@@ -489,7 +556,9 @@
409
410 return hit;
411}
+
412
+
413int LiDARcloud::getHitGridCell(uint index ) const{
414
415 if( index>=hits.size() ){
@@ -502,7 +571,9 @@
422 return hits.at(index).gridcell;
423
424}
+
425
+
426void LiDARcloud::setHitGridCell(uint index, int cell ){
427
428 if( index>=hits.size() ){
@@ -512,7 +583,9 @@
432 hits.at(index).gridcell = cell;
433
434}
+
435
+
436void LiDARcloud::coordinateShift(const vec3 &shift ){
437
438 for( auto & scan : scans){
@@ -524,7 +597,9 @@
444 }
445
446}
+
447
+
448void LiDARcloud::coordinateShift( uint scanID, const vec3 &shift ){
449
450 if( scanID >= scans.size() ) {
@@ -540,7 +615,9 @@
460 }
461
462}
+
463
+
464void LiDARcloud::coordinateRotation(const SphericalCoord &rotation ){
465
466 for( auto & scan : scans){
@@ -553,7 +630,9 @@
473 }
474
475}
+
476
+
477void LiDARcloud::coordinateRotation( uint scanID, const SphericalCoord &rotation ){
478
479 if( scanID >= scans.size() ) {
@@ -570,7 +649,9 @@
490 }
491
492}
+
493
+
494void LiDARcloud::coordinateRotation( float rotation, const vec3 &line_base,
495 const vec3 &line_direction ){
496
@@ -584,11 +665,15 @@
504 }
505
506}
+
507
+
508uint LiDARcloud::getTriangleCount() const{
509 return triangles.size();
510}
+
511
+
512Triangulation LiDARcloud::getTriangle(uint index ) const{
513 if( index>=triangles.size() ){
514 helios_runtime_error("ERROR (LiDARcloud::getTriangle): Triangle index out of bounds. Tried to get triangle #" + std::to_string(index) + " but point cloud only has " + std::to_string(triangles.size()) + " triangles.");
@@ -597,11 +682,15 @@
517 return triangles.at(index);
518
519}
+
520
+
521void LiDARcloud::addHitsToVisualizer( Visualizer* visualizer, uint pointsize ) const{
522 addHitsToVisualizer( visualizer, pointsize, "" );
523}
+
524
+
525void LiDARcloud::addHitsToVisualizer( Visualizer* visualizer, uint pointsize, const char* color_value ) const{
526
527 if( printmessages && scans.size()==0 ){
@@ -661,7 +750,9 @@
581 }
582
583}
+
584
+
585void LiDARcloud::addGridToVisualizer( Visualizer* visualizer ) const{
586
587 if( printmessages && scans.size()==0 ){
@@ -714,7 +805,9 @@
634 float R = 2.f*sqrt( pow(boxmax.x-boxmin.x,2) + pow(boxmax.y-boxmin.y,2) + pow(boxmax.z-boxmin.z,2) );
635
636}
+
637
+
638void LiDARcloud::addTrianglesToVisualizer( Visualizer* visualizer ) const{
639
640 if( printmessages && scans.size()==0 ){
@@ -731,7 +824,9 @@
651 }
652
653}
+
654
+
655void LiDARcloud::addTrianglesToVisualizer( Visualizer* visualizer, uint gridcell ) const{
656
657 if( printmessages && scans.size()==0 ){
@@ -750,7 +845,9 @@
670 }
671
672}
+
673
+
674void LiDARcloud::addGrid(const vec3 &center, const vec3 &size, const int3 &ndiv, float rotation)
675{
676 if(size.x<=0 || size.y<=0 || size.z<=0 ){
@@ -792,7 +889,9 @@
712 }
713
714}
+
715
+
716void LiDARcloud::addGridWireFrametoVisualizer(Visualizer* visualizer) const{
717
718
@@ -827,7 +926,9 @@
747
748
749}
+
750
+
751void LiDARcloud::addLeafReconstructionToVisualizer( Visualizer* visualizer ) const{
752
753 size_t Ngroups = reconstructed_triangles.size();
@@ -879,7 +980,9 @@
799 }
800
801}
+
802
+
803void LiDARcloud::addTrunkReconstructionToVisualizer( Visualizer* visualizer ) const{
804
805 size_t Ngroups = reconstructed_trunk_triangles.size();
@@ -901,7 +1004,9 @@
821 }
822
823}
+
824
+
825void LiDARcloud::addTrunkReconstructionToVisualizer( Visualizer* visualizer, const RGBcolor &trunk_color ) const{
826
827 size_t Ngroups = reconstructed_trunk_triangles.size();
@@ -921,11 +1026,15 @@
841 }
842
843}
+
844
+
845std::vector<uint> LiDARcloud::addLeafReconstructionToContext( Context* context ) const{
846 return addLeafReconstructionToContext( context, helios::make_int2(1,1) );
847}
+
848
+
849std::vector<uint> LiDARcloud::addLeafReconstructionToContext( Context* context,
850 const int2 &subpatches ) const{
851
@@ -968,7 +1077,9 @@
888 return UUIDs;
889
890}
+
891
+
892std::vector<uint> LiDARcloud::addReconstructedTriangleGroupsToContext( helios::Context* context ) const{
893
894 std::vector<uint> UUIDs;
@@ -1001,7 +1112,9 @@
921 return UUIDs;
922
923}
+
924
+
925std::vector<uint> LiDARcloud::addTrunkReconstructionToContext( Context* context ) const{
926
927 std::vector<uint> UUIDs;
@@ -1027,7 +1140,9 @@
947 return UUIDs;
948
949}
+
950
+
951void LiDARcloud::getHitBoundingBox( helios::vec3& boxmin, helios::vec3& boxmax ) const{
952
953 if( printmessages && hits.size()==0 ){
@@ -1064,7 +1179,9 @@
984 }
985
986}
+
987
+
988void LiDARcloud::getGridBoundingBox( helios::vec3& boxmin, helios::vec3& boxmax ) const{
989
990 if( printmessages && getGridCellCount()==0 ){
@@ -1111,7 +1228,9 @@
1031
1032
1033}
+
1034
+
1035void LiDARcloud::distanceFilter( float maxdistance ){
1036
1037 std::size_t delete_count = 0;
@@ -1131,7 +1250,9 @@
1051 std::cout << "Removed " << delete_count << " hit points based on distance filter." << std::endl;
1052 }
1053}
+
1054
+
1055void LiDARcloud::reflectanceFilter( float minreflectance ){
1056
1057 std::size_t delete_count = 0;
@@ -1150,7 +1271,9 @@
1070 }
1071
1072}
+
1073
+
1074void LiDARcloud::scalarFilter( const char* scalar_field, float threshold, const char* comparator ){
1075
1076 std::size_t delete_count = 0;
@@ -1181,13 +1304,17 @@
1101 }
1102
1103}
+
1104
+
1105void LiDARcloud::xyzFilter( float xmin, float xmax, float ymin, float ymax, float zmin, float zmax ){
1106
1107 xyzFilter(xmin, xmax, ymin, ymax, zmin, zmax, true);
1108
1109}
+
1110
+
1111void LiDARcloud::xyzFilter( float xmin, float xmax, float ymin, float ymax, float zmin, float zmax, bool deleteOutside){
1112
1113 if(xmin > xmax || ymin > ymax || zmin > zmax)
@@ -1224,6 +1351,7 @@
1144 }
1145
1146}
+
1147
1148// bool sortcol0( const std::vector<float>& v0, const std::vector<float>& v1 ){
1149// return v0.at(0)<v1.at(0);
@@ -1241,6 +1369,7 @@
1161 return v0.at(1)<v1.at(1);
1162}
1163
+
1164void LiDARcloud::maxPulseFilter( const char* scalar ){
1165
1166 if( printmessages ){
@@ -1306,7 +1435,9 @@
1226
1227
1228}
+
1229
+
1230void LiDARcloud::minPulseFilter( const char* scalar ){
1231
1232 if( printmessages ){
@@ -1372,7 +1503,9 @@
1292
1293
1294}
+
1295
+
1296void LiDARcloud::firstHitFilter() {
1297
1298 if( printmessages ){
@@ -1412,7 +1545,9 @@
1332
1333
1334}
+
1335
+
1336void LiDARcloud::lastHitFilter() {
1337
1338 if( printmessages ){
@@ -1458,7 +1593,9 @@
1378 }
1379
1380}
+
1381
+
1382void LiDARcloud::triangulateHitPoints( float Lmax, float max_aspect_ratio ){
1383
1384 if( printmessages && getScanCount() ==0 ){
@@ -1613,9 +1750,9 @@
1533 }
1534
1535 RGBcolor color = make_RGBcolor(0,0,0);
-
1536 color.r = (hits.at(ID0).color.r + hits.at(ID1).color.r + hits.at(ID2).color.r )/3.f;
-
1537 color.g = (hits.at(ID0).color.g + hits.at(ID1).color.g + hits.at(ID2).color.g )/3.f;
-
1538 color.b = (hits.at(ID0).color.b + hits.at(ID1).color.b + hits.at(ID2).color.b )/3.f;
+
1536 color.r = (hits.at(ID0).color.r + hits.at(ID1).color.r + hits.at(ID2).color.r )/3.f;
+
1537 color.g = (hits.at(ID0).color.g + hits.at(ID1).color.g + hits.at(ID2).color.g )/3.f;
+
1538 color.b = (hits.at(ID0).color.b + hits.at(ID1).color.b + hits.at(ID2).color.b )/3.f;
1539
1540 Triangulation tri( s, vertex0, vertex1, vertex2, ID0, ID1, ID2, color, gridcell );
1541
@@ -1639,7 +1776,9 @@
1559 }
1560
1561}
+
1562
+
1563void LiDARcloud::triangulateHitPoints( float Lmax, float max_aspect_ratio, const char* scalar_field, float threshold, const char* comparator ){
1564
1565 if( printmessages && getScanCount() ==0 ){
@@ -1821,9 +1960,9 @@
1741 }
1742
1743 RGBcolor color = make_RGBcolor(0,0,0);
-
1744 color.r = (hits.at(ID0).color.r + hits.at(ID1).color.r + hits.at(ID2).color.r )/3.f;
-
1745 color.g = (hits.at(ID0).color.g + hits.at(ID1).color.g + hits.at(ID2).color.g )/3.f;
-
1746 color.b = (hits.at(ID0).color.b + hits.at(ID1).color.b + hits.at(ID2).color.b )/3.f;
+
1744 color.r = (hits.at(ID0).color.r + hits.at(ID1).color.r + hits.at(ID2).color.r )/3.f;
+
1745 color.g = (hits.at(ID0).color.g + hits.at(ID1).color.g + hits.at(ID2).color.g )/3.f;
+
1746 color.b = (hits.at(ID0).color.b + hits.at(ID1).color.b + hits.at(ID2).color.b )/3.f;
1747
1748 Triangulation tri( s, vertex0, vertex1, vertex2, ID0, ID1, ID2, color, gridcell );
1749
@@ -1847,8 +1986,10 @@
1767 }
1768
1769}
+
1770
1771
+
1772void LiDARcloud::addTrianglesToContext( Context* context ) const{
1773
1774 if( scans.size()==0 ){
@@ -1867,15 +2008,21 @@
1787 }
1788
1789}
+
1790
+
1791uint LiDARcloud::getGridCellCount( void ) const{
1792 return grid_cells.size();
1793}
+
1794
+
1795void LiDARcloud::addGridCell(const vec3 &center, const vec3 &size, float rotation ){
1796 addGridCell(center,center,size,size,rotation,make_int3(1,1,1), make_int3(1,1,1));
1797}
+
1798
+
1799void LiDARcloud::addGridCell(const vec3 &center, const vec3 &global_anchor,
1800 const vec3 &size, const vec3 &global_size, float rotation, const int3 &global_ijk,
1801 const int3 &global_count ){
@@ -1885,7 +2032,9 @@
1805 grid_cells.push_back(newcell);
1806
1807}
+
1808
+
1809helios::vec3 LiDARcloud::getCellCenter(uint index ) const{
1810
1811 if( index>=getGridCellCount() ){
@@ -1895,7 +2044,9 @@
1815 return grid_cells.at(index).center;
1816
1817}
+
1818
+
1819helios::vec3 LiDARcloud::getCellGlobalAnchor(uint index ) const{
1820
1821 if( index>=getGridCellCount() ){
@@ -1905,7 +2056,9 @@
1825 return grid_cells.at(index).global_anchor;
1826
1827}
+
1828
+
1829helios::vec3 LiDARcloud::getCellSize(uint index ) const{
1830
1831 if( index>=getGridCellCount() ){
@@ -1915,7 +2068,9 @@
1835 return grid_cells.at(index).size;
1836
1837}
+
1838
+
1839float LiDARcloud::getCellRotation(uint index ) const{
1840
1841 if( index>=getGridCellCount() ){
@@ -1925,7 +2080,9 @@
1845 return grid_cells.at(index).azimuthal_rotation;
1846
1847}
+
1848
+
1849std::vector<float> LiDARcloud::calculateSyntheticGtheta( helios::Context* context ){
1850
1851 size_t Nprims = context->getPrimitiveCount();
@@ -1994,7 +2151,9 @@
1914 return output_Gtheta;
1915
1916}
+
1917
+
1918void LiDARcloud::setCellLeafArea( float area, uint index ){
1919
1920 if( index>getGridCellCount() ){
@@ -2004,7 +2163,9 @@
1924 grid_cells.at(index).leaf_area = area;
1925
1926}
+
1927
+
1928float LiDARcloud::getCellLeafArea(uint index ) const{
1929
1930 if( index>=getGridCellCount() ){
@@ -2014,7 +2175,9 @@
1934 return grid_cells.at(index).leaf_area;
1935
1936}
+
1937
+
1938float LiDARcloud::getCellLeafAreaDensity(uint index ) const{
1939
1940 if( index>=getGridCellCount() ){
@@ -2025,7 +2188,9 @@
1945 return grid_cells.at(index).leaf_area/(gridsize.x*gridsize.y*gridsize.z);
1946
1947}
+
1948
+
1949void LiDARcloud::setCellGtheta( float Gtheta, uint index ){
1950
1951 if( index>getGridCellCount() ){
@@ -2035,7 +2200,9 @@
1955 grid_cells.at(index).Gtheta = Gtheta;
1956
1957}
+
1958
+
1959float LiDARcloud::getCellGtheta(uint index ) const{
1960
1961 if( index>=getGridCellCount() ){
@@ -2045,6 +2212,7 @@
1965 return grid_cells.at(index).Gtheta;
1966
1967}
+
1968
1969void LiDARcloud::leafReconstructionFloodfill() {
1970
@@ -2151,10 +2319,13 @@
2071
2072}
2073
+
2074void LiDARcloud::leafReconstructionAlphaMask( float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char* mask_file ){
2075 leafReconstructionAlphaMask( minimum_leaf_group_area, maximum_leaf_group_area, leaf_aspect_ratio, -1.f, mask_file );
2076}
+
2077
+
2078void LiDARcloud::leafReconstructionAlphaMask( float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, float leaf_length_constant, const char* mask_file ){
2079
2080 if( printmessages ){
@@ -2307,6 +2478,7 @@
2227 //reconstructed_triangles.resize(0);
2228
2229}
+
2230
2231
2232void LiDARcloud::backfillLeavesAlphaMask(
@@ -2571,6 +2743,7 @@
2491
2492}
2493
+
2494void LiDARcloud::cropBeamsToGridAngleRange(uint source){
2495
2496 // loop through the vertices of the voxel grid.
@@ -2644,167 +2817,169 @@
2564
2565 std::cout << "# hitpoints remaining after crop = " << getHitCount() << std::endl;
2566}
+
2567
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
-
HitTable
Definition: LiDAR.h:24
-
LiDARcloud::getGridBoundingBox
void getGridBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all grid cells in the point cloud.
Definition: LiDAR.cpp:988
-
LiDARcloud::addTrianglesToVisualizer
void addTrianglesToVisualizer(Visualizer *visualizer) const
Add all triangles to the visualizer plug-in, and color them by their r-g-b color.
Definition: LiDAR.cpp:638
-
LiDARcloud::setHitGridCell
void setHitGridCell(uint index, int cell)
Set the grid cell in which the hit point resides.
Definition: LiDAR.cpp:426
-
LiDARcloud::LiDARcloud
LiDARcloud()
LiDAR point cloud constructor.
Definition: LiDAR.cpp:89
-
LiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition: LiDAR.cpp:521
-
LiDARcloud::getHitGridCell
int getHitGridCell(uint index) const
Get the grid cell in which the hit point resides.
Definition: LiDAR.cpp:413
-
LiDARcloud::coordinateRotation
void coordinateRotation(const helios::SphericalCoord &rotation)
Rotate all points in the point cloud about the origin.
Definition: LiDAR.cpp:464
-
LiDARcloud::getHitData
double getHitData(uint index, const char *label) const
Set floating point data value associated with a hit point.
Definition: LiDAR.cpp:345
-
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition: LiDAR.cpp:1791
-
LiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition: LiDAR.cpp:585
-
LiDARcloud::enableMessages
void enableMessages()
Enable all print messages to the screen.
Definition: LiDAR.cpp:104
-
LiDARcloud::setCellLeafArea
void setCellLeafArea(float area, uint index)
Set the leaf area of a grid cell in m^2.
Definition: LiDAR.cpp:1918
-
LiDARcloud::getHitIndex
int getHitIndex(uint scanID, uint row, uint column) const
Get the index of a scan point based on its row and column in the hit table.
Definition: LiDAR.cpp:395
-
LiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(uint index) const
Get the leaf area density of a grid cell in 1/m.
Definition: LiDAR.cpp:1938
-
LiDARcloud::getScanSizeTheta
uint getScanSizeTheta(uint scanID) const
Get the number of scan points in the theta (zenithal) direction.
Definition: LiDAR.cpp:265
-
LiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition: LiDAR.cpp:951
-
LiDARcloud::setHitData
void setHitData(uint index, const char *label, double value)
Get floating point data value associated with a hit point.
Definition: LiDAR.cpp:335
-
LiDARcloud::addTrunkReconstructionToContext
std::vector< uint > addTrunkReconstructionToContext(helios::Context *context) const
Add reconstructed trunk triangles to the Context.
Definition: LiDAR.cpp:925
-
LiDARcloud::setCellGtheta
void setCellGtheta(float Gtheta, uint index)
Set the average G(theta) value of a grid cell.
Definition: LiDAR.cpp:1949
-
LiDARcloud::addReconstructedTriangleGroupsToContext
std::vector< uint > addReconstructedTriangleGroupsToContext(helios::Context *context) const
Add triangle groups used in the direct reconstruction to the Context.
Definition: LiDAR.cpp:892
-
LiDARcloud::minPulseFilter
void minPulseFilter(const char *scalar)
Filter full-waveform data according to the minimum scalar value along each pulse. Any scalar value ca...
Definition: LiDAR.cpp:1230
-
LiDARcloud::getCellGtheta
float getCellGtheta(uint index) const
Get the G(theta) of a grid cell.
Definition: LiDAR.cpp:1959
-
LiDARcloud::getHitScanID
int getHitScanID(uint index) const
Get the scan with which a hit is associated.
Definition: LiDAR.cpp:385
-
LiDARcloud::addTrianglesToContext
void addTrianglesToContext(helios::Context *context) const
Add triangle geometry to Helios context.
Definition: LiDAR.cpp:1772
-
LiDARcloud::getCellSize
helios::vec3 getCellSize(uint index) const
Get the size of a grid cell by its index.
Definition: LiDAR.cpp:1829
-
LiDARcloud::getHitCount
uint getHitCount() const
Get the number of hit points in the point cloud.
Definition: LiDAR.cpp:254
-
LiDARcloud::getCellCenter
helios::vec3 getCellCenter(uint index) const
Get the (x,y,z) coordinate of a grid cell by its index.
Definition: LiDAR.cpp:1809
-
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
Definition: LiDAR.cpp:171
-
LiDARcloud::coordinateShift
void coordinateShift(const helios::vec3 &shift)
Apply a translation to all points in the point cloud.
Definition: LiDAR.cpp:436
-
LiDARcloud::addGrid
void addGrid(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &ndiv, float rotation)
Add a grid to point cloud instead of reading in from an xml file.
Definition: LiDAR.cpp:674
-
LiDARcloud::getScanRangeTheta
helios::vec2 getScanRangeTheta(uint scanID) const
Get the range of scan directions in the theta (zenithal) direction.
Definition: LiDAR.cpp:279
+ +
LiDARcloud::getGridBoundingBox
void getGridBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all grid cells in the point cloud.
Definition LiDAR.cpp:988
+
LiDARcloud::addTrianglesToVisualizer
void addTrianglesToVisualizer(Visualizer *visualizer) const
Add all triangles to the visualizer plug-in, and color them by their r-g-b color.
Definition LiDAR.cpp:638
+
LiDARcloud::setHitGridCell
void setHitGridCell(uint index, int cell)
Set the grid cell in which the hit point resides.
Definition LiDAR.cpp:426
+
LiDARcloud::LiDARcloud
LiDARcloud()
LiDAR point cloud constructor.
Definition LiDAR.cpp:89
+
LiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition LiDAR.cpp:521
+
LiDARcloud::getHitGridCell
int getHitGridCell(uint index) const
Get the grid cell in which the hit point resides.
Definition LiDAR.cpp:413
+
LiDARcloud::coordinateRotation
void coordinateRotation(const helios::SphericalCoord &rotation)
Rotate all points in the point cloud about the origin.
Definition LiDAR.cpp:464
+
LiDARcloud::getHitData
double getHitData(uint index, const char *label) const
Set floating point data value associated with a hit point.
Definition LiDAR.cpp:345
+
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition LiDAR.cpp:1791
+
LiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition LiDAR.cpp:585
+
LiDARcloud::enableMessages
void enableMessages()
Enable all print messages to the screen.
Definition LiDAR.cpp:104
+
LiDARcloud::setCellLeafArea
void setCellLeafArea(float area, uint index)
Set the leaf area of a grid cell in m^2.
Definition LiDAR.cpp:1918
+
LiDARcloud::getHitIndex
int getHitIndex(uint scanID, uint row, uint column) const
Get the index of a scan point based on its row and column in the hit table.
Definition LiDAR.cpp:395
+
LiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(uint index) const
Get the leaf area density of a grid cell in 1/m.
Definition LiDAR.cpp:1938
+
LiDARcloud::getScanSizeTheta
uint getScanSizeTheta(uint scanID) const
Get the number of scan points in the theta (zenithal) direction.
Definition LiDAR.cpp:265
+
LiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition LiDAR.cpp:951
+
LiDARcloud::setHitData
void setHitData(uint index, const char *label, double value)
Get floating point data value associated with a hit point.
Definition LiDAR.cpp:335
+
LiDARcloud::addTrunkReconstructionToContext
std::vector< uint > addTrunkReconstructionToContext(helios::Context *context) const
Add reconstructed trunk triangles to the Context.
Definition LiDAR.cpp:925
+
LiDARcloud::setCellGtheta
void setCellGtheta(float Gtheta, uint index)
Set the average G(theta) value of a grid cell.
Definition LiDAR.cpp:1949
+
LiDARcloud::addReconstructedTriangleGroupsToContext
std::vector< uint > addReconstructedTriangleGroupsToContext(helios::Context *context) const
Add triangle groups used in the direct reconstruction to the Context.
Definition LiDAR.cpp:892
+
LiDARcloud::minPulseFilter
void minPulseFilter(const char *scalar)
Filter full-waveform data according to the minimum scalar value along each pulse. Any scalar value ca...
Definition LiDAR.cpp:1230
+
LiDARcloud::getCellGtheta
float getCellGtheta(uint index) const
Get the G(theta) of a grid cell.
Definition LiDAR.cpp:1959
+
LiDARcloud::getHitScanID
int getHitScanID(uint index) const
Get the scan with which a hit is associated.
Definition LiDAR.cpp:385
+
LiDARcloud::addTrianglesToContext
void addTrianglesToContext(helios::Context *context) const
Add triangle geometry to Helios context.
Definition LiDAR.cpp:1772
+
LiDARcloud::getCellSize
helios::vec3 getCellSize(uint index) const
Get the size of a grid cell by its index.
Definition LiDAR.cpp:1829
+
LiDARcloud::getHitCount
uint getHitCount() const
Get the number of hit points in the point cloud.
Definition LiDAR.cpp:254
+
LiDARcloud::getCellCenter
helios::vec3 getCellCenter(uint index) const
Get the (x,y,z) coordinate of a grid cell by its index.
Definition LiDAR.cpp:1809
+
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
Definition LiDAR.cpp:171
+
LiDARcloud::coordinateShift
void coordinateShift(const helios::vec3 &shift)
Apply a translation to all points in the point cloud.
Definition LiDAR.cpp:436
+
LiDARcloud::addGrid
void addGrid(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &ndiv, float rotation)
Add a grid to point cloud instead of reading in from an xml file.
Definition LiDAR.cpp:674
+
LiDARcloud::getScanRangeTheta
helios::vec2 getScanRangeTheta(uint scanID) const
Get the range of scan directions in the theta (zenithal) direction.
Definition LiDAR.cpp:279
LiDARcloud::~LiDARcloud
~LiDARcloud()
LiDAR point cloud destructor.
-
LiDARcloud::cropBeamsToGridAngleRange
void cropBeamsToGridAngleRange(uint source)
Delete hitpoints that do not pass through / intersect the voxel grid.
Definition: LiDAR.cpp:2494
-
LiDARcloud::firstHitFilter
void firstHitFilter()
Filter full-waveform data to include only the first hit per laser pulse. The resulting point cloud wi...
Definition: LiDAR.cpp:1296
-
LiDARcloud::calculateSyntheticGtheta
std::vector< float > calculateSyntheticGtheta(helios::Context *context)
Calculate the G(theta) of all primitives in the context.
Definition: LiDAR.cpp:1849
-
LiDARcloud::addLeafReconstructionToVisualizer
void addLeafReconstructionToVisualizer(Visualizer *visualizer) const
Add reconstructed leaves (triangles or alpha masks) to the visualizer plug-in.
Definition: LiDAR.cpp:751
-
LiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(uint scanID) const
Divergence angle of the laser beam in radians.
Definition: LiDAR.cpp:300
-
LiDARcloud::getTriangle
Triangulation getTriangle(uint index) const
Get hit point corresponding to first vertex of triangle.
Definition: LiDAR.cpp:512
-
LiDARcloud::addTrunkReconstructionToVisualizer
void addTrunkReconstructionToVisualizer(Visualizer *visualizer) const
Add trunk reconstruction to the visualizer plug-in. Colors reconstructed triangles by hit point color...
Definition: LiDAR.cpp:803
-
LiDARcloud::getCellRotation
float getCellRotation(uint index) const
Get the size of a grid cell by its index.
Definition: LiDAR.cpp:1839
-
LiDARcloud::scalarFilter
void scalarFilter(const char *scalar_field, float threshold, const char *comparator)
Filter hit points based on a scalar field given by a column in the ASCII data.
Definition: LiDAR.cpp:1074
-
LiDARcloud::maxPulseFilter
void maxPulseFilter(const char *scalar)
Filter full-waveform data according to the maximum scalar value along each pulse. Any scalar value ca...
Definition: LiDAR.cpp:1164
-
LiDARcloud::getScanOrigin
helios::vec3 getScanOrigin(uint scanID) const
Get the (x,y,z) scan origin.
Definition: LiDAR.cpp:258
-
LiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(uint index) const
Get ray direction of hit point in the scan based on its index.
Definition: LiDAR.cpp:324
-
LiDARcloud::getScanCount
uint getScanCount()
Get number of scans in point cloud.
Definition: LiDAR.cpp:135
-
LiDARcloud::doesHitDataExist
bool doesHitDataExist(uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition: LiDAR.cpp:360
-
LiDARcloud::getScanSizePhi
uint getScanSizePhi(uint scanID) const
Get the number of scan points in the phi (azimuthal) direction.
Definition: LiDAR.cpp:272
-
LiDARcloud::getHitColor
helios::RGBcolor getHitColor(uint index) const
Get color of hit point.
Definition: LiDAR.cpp:375
-
LiDARcloud::calculateHitGridCellGPU
void calculateHitGridCellGPU()
Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated v...
Definition: LiDAR.cu:268
-
LiDARcloud::getScanRangePhi
helios::vec2 getScanRangePhi(uint scanID) const
Get the range of scan directions in the phi (azimuthal) direction.
Definition: LiDAR.cpp:286
-
LiDARcloud::lastHitFilter
void lastHitFilter()
Filter full-waveform data to include only the last hit per laser pulse. The resulting point cloud wil...
Definition: LiDAR.cpp:1336
-
LiDARcloud::leafReconstructionAlphaMask
void leafReconstructionAlphaMask(float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
Perform a leaf reconstruction based on texture-masked Patches within each gridcell....
Definition: LiDAR.cpp:2074
-
LiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition: LiDAR.cpp:293
-
LiDARcloud::addScan
uint addScan(ScanMetadata &newscan)
Add a LiDAR scan to the point cloud.
Definition: LiDAR.cpp:139
-
LiDARcloud::getScanColumnFormat
std::vector< std::string > getScanColumnFormat(uint scanID) const
Get the labels for columns in ASCII input/output file.
Definition: LiDAR.cpp:307
-
LiDARcloud::getTriangleCount
uint getTriangleCount() const
Get the number of triangles formed by the triangulation.
Definition: LiDAR.cpp:508
-
LiDARcloud::xyzFilter
void xyzFilter(float xmin, float xmax, float ymin, float ymax, float zmin, float zmax)
overloaded version of xyzFilter that defaults to deleting points outside the provided bounding box
Definition: LiDAR.cpp:1105
-
LiDARcloud::triangulateHitPoints
void triangulateHitPoints(float Lmax, float max_aspect_ratio)
Perform triangulation on all hit points in point cloud.
Definition: LiDAR.cpp:1382
-
LiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition: LiDAR.cpp:314
-
LiDARcloud::addGridCell
void addGridCell(const helios::vec3 &center, const helios::vec3 &size, float rotation)
Add a cell to the grid.
Definition: LiDAR.cpp:1795
-
LiDARcloud::getCellLeafArea
float getCellLeafArea(uint index) const
Get the leaf area of a grid cell in m^2.
Definition: LiDAR.cpp:1928
-
LiDARcloud::deleteHitPoint
void deleteHitPoint(uint index)
Delete a hit point in the scan.
Definition: LiDAR.cpp:237
-
LiDARcloud::getCellGlobalAnchor
helios::vec3 getCellGlobalAnchor(uint index) const
Get the (x,y,z) coordinate of a grid global anchor by its index.
Definition: LiDAR.cpp:1819
-
LiDARcloud::reflectanceFilter
void reflectanceFilter(float minreflectance)
Filter scan by imposing a minimum reflectance value.
Definition: LiDAR.cpp:1055
-
LiDARcloud::addLeafReconstructionToContext
std::vector< uint > addLeafReconstructionToContext(helios::Context *context) const
Add reconstructed leaves (texture-masked patches) to the Context.
Definition: LiDAR.cpp:845
-
LiDARcloud::distanceFilter
void distanceFilter(float maxdistance)
Filter scan by imposing a maximum distance from the scanner.
Definition: LiDAR.cpp:1035
-
LiDARcloud::disableMessages
void disableMessages()
Disable all print messages to the screen except for fatal error messages.
Definition: LiDAR.cpp:100
-
LiDARcloud::addGridWireFrametoVisualizer
void addGridWireFrametoVisualizer(Visualizer *visualizer) const
Add wire frame of the grid to the visualizer plug-in.
Definition: LiDAR.cpp:716
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition: Visualizer.h:316
-
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition: Visualizer.cpp:2104
-
Visualizer::addTriangle
void addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a triangle by giving the coordinates of its three vertices.
Definition: Visualizer.cpp:1575
-
Visualizer::addLine
void addLine(const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
Add Lines by giving the coordinates of points along the Lines.
Definition: Visualizer.cpp:2045
-
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition: Visualizer.cpp:1851
-
Visualizer::addRectangleByCenter
void addRectangleByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its center.
Definition: Visualizer.cpp:999
-
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition: Visualizer.cpp:2697
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition: Context.cpp:1578
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition: Context.cpp:1491
-
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition: Context.cpp:7104
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::readPNGAlpha
std::vector< std::vector< bool > > readPNGAlpha(const std::string &filename)
Function to read the alpha channel from a PNG image.
Definition: global.cpp:1488
-
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:5809
-
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition: global.cpp:223
-
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition: global.cpp:79
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition: global.cpp:1100
-
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition: global.cpp:1146
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition: Context.cpp:1759
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition: helios_vector_types.h:1133
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
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helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
Colormap
RGB color map.
Definition: Visualizer.h:165
- -
HitPoint
Definition: LiDAR.h:84
-
ScanMetadata
Structure containing metadata for a terrestrial scan.
Definition: LiDAR.h:188
-
ScanMetadata::phiMin
float phiMin
Minimum azimuthal angle of scan in radians.
Definition: LiDAR.h:227
-
ScanMetadata::thetaMin
float thetaMin
Minimum zenithal angle of scan in radians
Definition: LiDAR.h:214
-
ScanMetadata::origin
helios::vec3 origin
(x,y,z) coordinate of scanner location
Definition: LiDAR.h:235
-
ScanMetadata::thetaMax
float thetaMax
Maximum zenithal angle of scan in radians.
Definition: LiDAR.h:219
-
ScanMetadata::phiMax
float phiMax
Maximum azimuthal angle of scan in radians.
Definition: LiDAR.h:232
-
ScanMetadata::ScanMetadata
ScanMetadata()
Default LiDAR scan data structure.
Definition: LiDAR.cpp:21
-
ScanMetadata::Ntheta
uint Ntheta
Number of zenithal angles in scan (rows)
Definition: LiDAR.h:209
-
ScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition: LiDAR.h:241
-
ScanMetadata::Nphi
uint Nphi
Number of azimuthal angles in scan (columns)
Definition: LiDAR.h:222
-
ScanMetadata::data_file
std::string data_file
File containing hit point data.
Definition: LiDAR.h:206
-
ScanMetadata::direction2rc
helios::int2 direction2rc(const helios::SphericalCoord &direction) const
Convert the scan ray direction into (row,column) table index.
Definition: LiDAR.cpp:66
-
ScanMetadata::columnFormat
std::vector< std::string > columnFormat
Vector of strings specifying the columns of the scan ASCII file for input/output.
Definition: LiDAR.h:250
-
ScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition: LiDAR.h:247
-
ScanMetadata::rc2direction
helios::SphericalCoord rc2direction(uint row, uint column) const
Convert the (row,column) of hit point in a scan to a direction vector.
Definition: LiDAR.cpp:57
-
Shx
Definition: s_hull_pro.h:72
- -
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
+
LiDARcloud::cropBeamsToGridAngleRange
void cropBeamsToGridAngleRange(uint source)
Delete hitpoints that do not pass through / intersect the voxel grid.
Definition LiDAR.cpp:2494
+
LiDARcloud::firstHitFilter
void firstHitFilter()
Filter full-waveform data to include only the first hit per laser pulse. The resulting point cloud wi...
Definition LiDAR.cpp:1296
+
LiDARcloud::calculateSyntheticGtheta
std::vector< float > calculateSyntheticGtheta(helios::Context *context)
Calculate the G(theta) of all primitives in the context.
Definition LiDAR.cpp:1849
+
LiDARcloud::addLeafReconstructionToVisualizer
void addLeafReconstructionToVisualizer(Visualizer *visualizer) const
Add reconstructed leaves (triangles or alpha masks) to the visualizer plug-in.
Definition LiDAR.cpp:751
+
LiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(uint scanID) const
Divergence angle of the laser beam in radians.
Definition LiDAR.cpp:300
+
LiDARcloud::getTriangle
Triangulation getTriangle(uint index) const
Get hit point corresponding to first vertex of triangle.
Definition LiDAR.cpp:512
+
LiDARcloud::addTrunkReconstructionToVisualizer
void addTrunkReconstructionToVisualizer(Visualizer *visualizer) const
Add trunk reconstruction to the visualizer plug-in. Colors reconstructed triangles by hit point color...
Definition LiDAR.cpp:803
+
LiDARcloud::getCellRotation
float getCellRotation(uint index) const
Get the size of a grid cell by its index.
Definition LiDAR.cpp:1839
+
LiDARcloud::scalarFilter
void scalarFilter(const char *scalar_field, float threshold, const char *comparator)
Filter hit points based on a scalar field given by a column in the ASCII data.
Definition LiDAR.cpp:1074
+
LiDARcloud::maxPulseFilter
void maxPulseFilter(const char *scalar)
Filter full-waveform data according to the maximum scalar value along each pulse. Any scalar value ca...
Definition LiDAR.cpp:1164
+
LiDARcloud::getScanOrigin
helios::vec3 getScanOrigin(uint scanID) const
Get the (x,y,z) scan origin.
Definition LiDAR.cpp:258
+
LiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(uint index) const
Get ray direction of hit point in the scan based on its index.
Definition LiDAR.cpp:324
+
LiDARcloud::getScanCount
uint getScanCount()
Get number of scans in point cloud.
Definition LiDAR.cpp:135
+
LiDARcloud::doesHitDataExist
bool doesHitDataExist(uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition LiDAR.cpp:360
+
LiDARcloud::getScanSizePhi
uint getScanSizePhi(uint scanID) const
Get the number of scan points in the phi (azimuthal) direction.
Definition LiDAR.cpp:272
+
LiDARcloud::getHitColor
helios::RGBcolor getHitColor(uint index) const
Get color of hit point.
Definition LiDAR.cpp:375
+
LiDARcloud::calculateHitGridCellGPU
void calculateHitGridCellGPU()
Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated v...
Definition LiDAR.cu:268
+
LiDARcloud::getScanRangePhi
helios::vec2 getScanRangePhi(uint scanID) const
Get the range of scan directions in the phi (azimuthal) direction.
Definition LiDAR.cpp:286
+
LiDARcloud::lastHitFilter
void lastHitFilter()
Filter full-waveform data to include only the last hit per laser pulse. The resulting point cloud wil...
Definition LiDAR.cpp:1336
+
LiDARcloud::leafReconstructionAlphaMask
void leafReconstructionAlphaMask(float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
Perform a leaf reconstruction based on texture-masked Patches within each gridcell....
Definition LiDAR.cpp:2074
+
LiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition LiDAR.cpp:293
+
LiDARcloud::addScan
uint addScan(ScanMetadata &newscan)
Add a LiDAR scan to the point cloud.
Definition LiDAR.cpp:139
+
LiDARcloud::getScanColumnFormat
std::vector< std::string > getScanColumnFormat(uint scanID) const
Get the labels for columns in ASCII input/output file.
Definition LiDAR.cpp:307
+
LiDARcloud::getTriangleCount
uint getTriangleCount() const
Get the number of triangles formed by the triangulation.
Definition LiDAR.cpp:508
+
LiDARcloud::xyzFilter
void xyzFilter(float xmin, float xmax, float ymin, float ymax, float zmin, float zmax)
overloaded version of xyzFilter that defaults to deleting points outside the provided bounding box
Definition LiDAR.cpp:1105
+
LiDARcloud::triangulateHitPoints
void triangulateHitPoints(float Lmax, float max_aspect_ratio)
Perform triangulation on all hit points in point cloud.
Definition LiDAR.cpp:1382
+
LiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition LiDAR.cpp:314
+
LiDARcloud::addGridCell
void addGridCell(const helios::vec3 &center, const helios::vec3 &size, float rotation)
Add a cell to the grid.
Definition LiDAR.cpp:1795
+
LiDARcloud::getCellLeafArea
float getCellLeafArea(uint index) const
Get the leaf area of a grid cell in m^2.
Definition LiDAR.cpp:1928
+
LiDARcloud::deleteHitPoint
void deleteHitPoint(uint index)
Delete a hit point in the scan.
Definition LiDAR.cpp:237
+
LiDARcloud::getCellGlobalAnchor
helios::vec3 getCellGlobalAnchor(uint index) const
Get the (x,y,z) coordinate of a grid global anchor by its index.
Definition LiDAR.cpp:1819
+
LiDARcloud::reflectanceFilter
void reflectanceFilter(float minreflectance)
Filter scan by imposing a minimum reflectance value.
Definition LiDAR.cpp:1055
+
LiDARcloud::addLeafReconstructionToContext
std::vector< uint > addLeafReconstructionToContext(helios::Context *context) const
Add reconstructed leaves (texture-masked patches) to the Context.
Definition LiDAR.cpp:845
+
LiDARcloud::distanceFilter
void distanceFilter(float maxdistance)
Filter scan by imposing a maximum distance from the scanner.
Definition LiDAR.cpp:1035
+
LiDARcloud::disableMessages
void disableMessages()
Disable all print messages to the screen except for fatal error messages.
Definition LiDAR.cpp:100
+
LiDARcloud::addGridWireFrametoVisualizer
void addGridWireFrametoVisualizer(Visualizer *visualizer) const
Add wire frame of the grid to the visualizer plug-in.
Definition LiDAR.cpp:716
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition Visualizer.h:326
+
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition Visualizer.cpp:2108
+
Visualizer::addTriangle
void addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a triangle by giving the coordinates of its three vertices.
Definition Visualizer.cpp:1579
+
Visualizer::addLine
void addLine(const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
Add Lines by giving the coordinates of points along the Lines.
Definition Visualizer.cpp:2049
+
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition Visualizer.cpp:1855
+
Visualizer::addRectangleByCenter
void addRectangleByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its center.
Definition Visualizer.cpp:1003
+
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition Visualizer.cpp:2701
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition Context.cpp:1578
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition Context.cpp:1491
+
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition Context.cpp:7104
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::readPNGAlpha
std::vector< std::vector< bool > > readPNGAlpha(const std::string &filename)
Function to read the alpha channel from a PNG image.
Definition global.cpp:1488
+
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:5809
+
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition global.cpp:223
+
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition global.cpp:79
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition global.cpp:1100
+
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition global.cpp:1146
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition Context.cpp:1759
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition helios_vector_types.h:1133
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
Colormap
RGB color map.
Definition Visualizer.h:175
+ + +
ScanMetadata
Structure containing metadata for a terrestrial scan.
Definition LiDAR.h:188
+
ScanMetadata::phiMin
float phiMin
Minimum azimuthal angle of scan in radians.
Definition LiDAR.h:227
+
ScanMetadata::thetaMin
float thetaMin
Minimum zenithal angle of scan in radians
Definition LiDAR.h:214
+
ScanMetadata::origin
helios::vec3 origin
(x,y,z) coordinate of scanner location
Definition LiDAR.h:235
+
ScanMetadata::thetaMax
float thetaMax
Maximum zenithal angle of scan in radians.
Definition LiDAR.h:219
+
ScanMetadata::phiMax
float phiMax
Maximum azimuthal angle of scan in radians.
Definition LiDAR.h:232
+
ScanMetadata::ScanMetadata
ScanMetadata()
Default LiDAR scan data structure.
Definition LiDAR.cpp:21
+
ScanMetadata::Ntheta
uint Ntheta
Number of zenithal angles in scan (rows)
Definition LiDAR.h:209
+
ScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition LiDAR.h:241
+
ScanMetadata::Nphi
uint Nphi
Number of azimuthal angles in scan (columns)
Definition LiDAR.h:222
+
ScanMetadata::data_file
std::string data_file
File containing hit point data.
Definition LiDAR.h:206
+
ScanMetadata::direction2rc
helios::int2 direction2rc(const helios::SphericalCoord &direction) const
Convert the scan ray direction into (row,column) table index.
Definition LiDAR.cpp:66
+
ScanMetadata::columnFormat
std::vector< std::string > columnFormat
Vector of strings specifying the columns of the scan ASCII file for input/output.
Definition LiDAR.h:250
+
ScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition LiDAR.h:247
+
ScanMetadata::rc2direction
helios::SphericalCoord rc2direction(uint row, uint column) const
Convert the (row,column) of hit point in a scan to a direction vector.
Definition LiDAR.cpp:57
+ + +
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_li_d_a_r_8cu.html b/doc/html/_li_d_a_r_8cu.html index ead7fb35f..3a9bd559a 100644 --- a/doc/html/_li_d_a_r_8cu.html +++ b/doc/html/_li_d_a_r_8cu.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
LiDAR.cu File Reference
@@ -106,7 +118,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_li_d_a_r_8cu_source.html b/doc/html/_li_d_a_r_8cu_source.html index c786fcfd1..3ced58e2d 100644 --- a/doc/html/_li_d_a_r_8cu_source.html +++ b/doc/html/_li_d_a_r_8cu_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
LiDAR.cu
@@ -345,6 +357,7 @@
265 return v0.at(1)<v1.at(1);
266}
267
+
268void LiDARcloud::calculateHitGridCellGPU() {
269
270 if( printmessages ){
@@ -454,6 +467,7 @@
378 }
379
380}
+
381
382void LiDARcloud::sourcesInsideGridCellGPU() {
383
@@ -561,6 +575,7 @@
489
490}
491
+
492std::vector<helios::vec3> LiDARcloud::gapfillMisses(){
493 std::vector<helios::vec3> xyz_filled;
494 for( uint scanID=0; scanID<getScanCount(); scanID++ ){
@@ -569,11 +584,15 @@
497 }
498 return xyz_filled;
499}
+
500
+
501std::vector<helios::vec3> LiDARcloud::gapfillMisses(uint scanID){
502 return gapfillMisses(scanID, false, false);
503}
+
504
+
505std::vector<helios::vec3> LiDARcloud::gapfillMisses(uint scanID, const bool gapfill_grid_only, const bool add_flags){
506
507 if( printmessages ) {
@@ -776,8 +795,8 @@
704 float timestep = hit_table2D.at(j).at(i).at(1) + dt_avg*float(k);
705
706 //interpolate theta and phi
-
707 float theta = hit_table2D.at(j).at(i).at(2) + (hit_table2D.at(j).at(i+1).at(2)-hit_table2D.at(j).at(i).at(2))*float(k)/float(Ngap+1);
-
708 float phi = hit_table2D.at(j).at(i).at(3) + (hit_table2D.at(j).at(i+1).at(3)-hit_table2D.at(j).at(i).at(3))*float(k)/float(Ngap+1);
+
707 float theta = hit_table2D.at(j).at(i).at(2) + (hit_table2D.at(j).at(i+1).at(2)-hit_table2D.at(j).at(i).at(2))*float(k)/float(Ngap+1);
+
708 float phi = hit_table2D.at(j).at(i).at(3) + (hit_table2D.at(j).at(i+1).at(3)-hit_table2D.at(j).at(i).at(3))*float(k)/float(Ngap+1);
709 if( phi>2.f*M_PI ){
710 phi = phi-2.f*M_PI;
711 }
@@ -964,12 +983,16 @@
892 return xyz_filled;
893
894}
+
895
896
+
900
+
901void LiDARcloud::calculateLeafAreaGPU( int min_voxel_hits){
902
903 if( printmessages ){
@@ -1427,7 +1450,9 @@
1355 }
1356
1357}
+
1358
+
1359void LiDARcloud::calculateLeafAreaGPU_testing( int min_voxel_hits){
1360
1361 if( printmessages ){
@@ -1758,7 +1783,9 @@
1686 }
1687
1688}
+
1689
+
1690void LiDARcloud::calculateLeafAreaGPU_synthetic( helios::Context* context, bool beamoutput, bool fillAnalytic ){
1691
1692 // calculates LAD using several different methods investigated in Kent & Bailey (2023)
@@ -2415,6 +2442,7 @@
2349 }
2350
2351}
+
2352
2353std::vector<float> LiDARcloud::LAD_inversion(std::vector<float> &P, std::vector<float> &Gtheta,
2354 std::vector<std::vector<float>> &dr_array, bool fillAnalytic){
@@ -2901,6 +2929,7 @@
2835
2836}
2837
+
2838void LiDARcloud::trunkReconstruction(const helios::vec3 &box_center,
2839 const helios::vec3 &box_size, float Lmax, float max_aspect_ratio ){
2840
@@ -3056,9 +3085,9 @@
2990 }
2991
2992 helios::RGBcolor color = helios::make_RGBcolor(0,0,0);
-
2993 color.r = (hits.at(ID0).color.r + hits.at(ID1).color.r + hits.at(ID2).color.r )/3.f;
-
2994 color.g = (hits.at(ID0).color.g + hits.at(ID1).color.g + hits.at(ID2).color.g )/3.f;
-
2995 color.b = (hits.at(ID0).color.b + hits.at(ID1).color.b + hits.at(ID2).color.b )/3.f;
+
2993 color.r = (hits.at(ID0).color.r + hits.at(ID1).color.r + hits.at(ID2).color.r )/3.f;
+
2994 color.g = (hits.at(ID0).color.g + hits.at(ID1).color.g + hits.at(ID2).color.g )/3.f;
+
2995 color.b = (hits.at(ID0).color.b + hits.at(ID1).color.b + hits.at(ID2).color.b )/3.f;
2996
2997 Triangulation tri( s, vertex0, vertex1, vertex2, ID0, ID1, ID2, color, 0 );
2998
@@ -3155,19 +3184,27 @@
3089 }
3090
3091}
+
3092
+
3093void LiDARcloud::syntheticScan( helios::Context* context ){
3094 syntheticScan( context, 1, 0, false, false );
3095}
+
3096
+
3097void LiDARcloud::syntheticScan( helios::Context* context, bool scan_grid_only, bool record_misses ){
3098 syntheticScan( context, 1, 0, scan_grid_only, record_misses );
3099}
+
3100
+
3101void LiDARcloud::syntheticScan( helios::Context* context, int rays_per_pulse, float pulse_distance_threshold ){
3102 syntheticScan( context, rays_per_pulse, pulse_distance_threshold, false, false );
3103}
+
3104
+
3105void LiDARcloud::syntheticScan( helios::Context* context, int rays_per_pulse, float pulse_distance_threshold, bool scan_grid_only, bool record_misses ){
3106
3107 int Npulse;
@@ -3774,7 +3811,9 @@
3708 }
3709
3710}
+
3711
+
3712std::vector<float> LiDARcloud::calculateSyntheticLeafArea( helios::Context* context ){
3713
3714 float3* d_prim_xyz;
@@ -3885,6 +3924,7 @@
3823 return output_LeafArea;
3824
3825}
+
3826
3827__global__ void LIDAR_CUDA::intersectPatches( const size_t Npulse, const int rays_per_pulse, const float3 origin, float3* d_raydir, const float exit_diameter, const float beam_divergence,const int Npatches, float3* d_patch_vertex, int* d_patch_textureID, const int Ntextures, int2* d_masksize, int2 masksize_max, bool* d_maskdata, float2* d_patch_uv, float* d_hit_t, float* d_hit_fnorm, int* d_hit_ID ){
3828
@@ -4088,6 +4128,7 @@
4026
4027
4028
+
4029void LiDARcloud::calculateLeafAreaGPU_equal_weighting(bool beamoutput, bool fillAnalytic ){
4030
4031 // calculates LAD using the equal weighting method
@@ -4533,8 +4574,10 @@
4478 }
4479
4480}
+
4481
4482
+
4483void LiDARcloud::calculateLeafAreaGPU_equal_weighting(bool beamoutput, bool fillAnalytic, std::vector<float> constant_G){
4484
4485 // calculates LAD using the equal weighting method
@@ -5028,7 +5071,9 @@
4980 }
4981
4982}
+
4983
+
4984std::vector<uint> LiDARcloud::peakFinder(std::vector<float> signal){
4985
4986 for(uint i=0;i<signal.size();i++)
@@ -5093,103 +5138,105 @@
5045
5046 return peakIndices;
5047}
+
5048
5049
5050
5051
-
d_rotatePoint
__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
Definition: RayTracing.cu.h:106
-
LiDARcloud::getGridBoundingBox
void getGridBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all grid cells in the point cloud.
Definition: LiDAR.cpp:988
-
LiDARcloud::setHitGridCell
void setHitGridCell(uint index, int cell)
Set the grid cell in which the hit point resides.
Definition: LiDAR.cpp:426
-
LiDARcloud::calculateSyntheticLeafArea
std::vector< float > calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition: LiDAR.cu:3712
-
LiDARcloud::getHitGridCell
int getHitGridCell(uint index) const
Get the grid cell in which the hit point resides.
Definition: LiDAR.cpp:413
-
LiDARcloud::getHitData
double getHitData(uint index, const char *label) const
Set floating point data value associated with a hit point.
Definition: LiDAR.cpp:345
-
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition: LiDAR.cpp:1791
-
LiDARcloud::setCellLeafArea
void setCellLeafArea(float area, uint index)
Set the leaf area of a grid cell in m^2.
Definition: LiDAR.cpp:1918
-
LiDARcloud::getScanSizeTheta
uint getScanSizeTheta(uint scanID) const
Get the number of scan points in the theta (zenithal) direction.
Definition: LiDAR.cpp:265
-
LiDARcloud::setHitData
void setHitData(uint index, const char *label, double value)
Get floating point data value associated with a hit point.
Definition: LiDAR.cpp:335
-
LiDARcloud::setCellGtheta
void setCellGtheta(float Gtheta, uint index)
Set the average G(theta) value of a grid cell.
Definition: LiDAR.cpp:1949
-
LiDARcloud::gapfillMisses
std::vector< helios::vec3 > gapfillMisses()
For scans that are missing points (e.g., sky points), this function will attempt to fill in missing p...
Definition: LiDAR.cu:492
-
LiDARcloud::getHitScanID
int getHitScanID(uint index) const
Get the scan with which a hit is associated.
Definition: LiDAR.cpp:385
-
LiDARcloud::getCellSize
helios::vec3 getCellSize(uint index) const
Get the size of a grid cell by its index.
Definition: LiDAR.cpp:1829
-
LiDARcloud::getHitCount
uint getHitCount() const
Get the number of hit points in the point cloud.
Definition: LiDAR.cpp:254
-
LiDARcloud::getCellCenter
helios::vec3 getCellCenter(uint index) const
Get the (x,y,z) coordinate of a grid cell by its index.
Definition: LiDAR.cpp:1809
-
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
Definition: LiDAR.cpp:171
-
LiDARcloud::calculateLeafAreaGPU_equal_weighting
void calculateLeafAreaGPU_equal_weighting(bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume using equal weighting method.
Definition: LiDAR.cu:4029
-
LiDARcloud::getScanRangeTheta
helios::vec2 getScanRangeTheta(uint scanID) const
Get the range of scan directions in the theta (zenithal) direction.
Definition: LiDAR.cpp:279
-
LiDARcloud::calculateSyntheticGtheta
std::vector< float > calculateSyntheticGtheta(helios::Context *context)
Calculate the G(theta) of all primitives in the context.
Definition: LiDAR.cpp:1849
-
LiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(uint scanID) const
Divergence angle of the laser beam in radians.
Definition: LiDAR.cpp:300
-
LiDARcloud::getTriangle
Triangulation getTriangle(uint index) const
Get hit point corresponding to first vertex of triangle.
Definition: LiDAR.cpp:512
-
LiDARcloud::getCellRotation
float getCellRotation(uint index) const
Get the size of a grid cell by its index.
Definition: LiDAR.cpp:1839
-
LiDARcloud::getScanOrigin
helios::vec3 getScanOrigin(uint scanID) const
Get the (x,y,z) scan origin.
Definition: LiDAR.cpp:258
-
LiDARcloud::calculateLeafAreaGPU_testing
void calculateLeafAreaGPU_testing(int min_voxel_hits)
Calculate the leaf area for each grid volume.
Definition: LiDAR.cu:1359
-
LiDARcloud::trunkReconstruction
void trunkReconstruction(const helios::vec3 &box_center, const helios::vec3 &box_size, float Lmax, float max_aspect_ratio)
Reconstruct the trunk of the tree. In order to do this, you must specify the center and size of a rec...
Definition: LiDAR.cu:2838
-
LiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(uint index) const
Get ray direction of hit point in the scan based on its index.
Definition: LiDAR.cpp:324
-
LiDARcloud::getScanCount
uint getScanCount()
Get number of scans in point cloud.
Definition: LiDAR.cpp:135
-
LiDARcloud::doesHitDataExist
bool doesHitDataExist(uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition: LiDAR.cpp:360
-
LiDARcloud::syntheticScan
void syntheticScan(helios::Context *context)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
Definition: LiDAR.cu:3093
-
LiDARcloud::getScanSizePhi
uint getScanSizePhi(uint scanID) const
Get the number of scan points in the phi (azimuthal) direction.
Definition: LiDAR.cpp:272
-
LiDARcloud::calculateHitGridCellGPU
void calculateHitGridCellGPU()
Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated v...
Definition: LiDAR.cu:268
-
LiDARcloud::getScanRangePhi
helios::vec2 getScanRangePhi(uint scanID) const
Get the range of scan directions in the phi (azimuthal) direction.
Definition: LiDAR.cpp:286
-
LiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition: LiDAR.cpp:293
-
LiDARcloud::getScanColumnFormat
std::vector< std::string > getScanColumnFormat(uint scanID) const
Get the labels for columns in ASCII input/output file.
Definition: LiDAR.cpp:307
-
LiDARcloud::getTriangleCount
uint getTriangleCount() const
Get the number of triangles formed by the triangulation.
Definition: LiDAR.cpp:508
-
LiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition: LiDAR.cpp:314
-
LiDARcloud::calculateLeafAreaGPU_synthetic
void calculateLeafAreaGPU_synthetic(helios::Context *context, bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume in a synthetic scan using several different method for e...
Definition: LiDAR.cu:1690
-
LiDARcloud::peakFinder
std::vector< uint > peakFinder(std::vector< float > signal)
find the indices of the peaks of a vector of floats
Definition: LiDAR.cu:4984
-
LiDARcloud::getCellGlobalAnchor
helios::vec3 getCellGlobalAnchor(uint index) const
Get the (x,y,z) coordinate of a grid global anchor by its index.
Definition: LiDAR.cpp:1819
-
LiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU()
Calculate the leaf area for each grid volume.
Definition: LiDAR.cu:897
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveColor
helios::RGBcolor getPrimitiveColor(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition: Context.cpp:7127
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition: Context.cpp:7179
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition: Context.cpp:7167
-
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Context.cpp:2046
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition: Context.cpp:7187
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::atan2_2pi
float atan2_2pi(float y, float x)
Four quadrant arc tangent between 0 and 2*pi.
Definition: global.cpp:584
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition: global.cpp:1084
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
Shx
Definition: s_hull_pro.h:72
- -
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
+
d_rotatePoint
__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
Definition RayTracing.cu.h:106
+
LiDARcloud::getGridBoundingBox
void getGridBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all grid cells in the point cloud.
Definition LiDAR.cpp:988
+
LiDARcloud::setHitGridCell
void setHitGridCell(uint index, int cell)
Set the grid cell in which the hit point resides.
Definition LiDAR.cpp:426
+
LiDARcloud::calculateSyntheticLeafArea
std::vector< float > calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition LiDAR.cu:3712
+
LiDARcloud::getHitGridCell
int getHitGridCell(uint index) const
Get the grid cell in which the hit point resides.
Definition LiDAR.cpp:413
+
LiDARcloud::getHitData
double getHitData(uint index, const char *label) const
Set floating point data value associated with a hit point.
Definition LiDAR.cpp:345
+
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition LiDAR.cpp:1791
+
LiDARcloud::setCellLeafArea
void setCellLeafArea(float area, uint index)
Set the leaf area of a grid cell in m^2.
Definition LiDAR.cpp:1918
+
LiDARcloud::getScanSizeTheta
uint getScanSizeTheta(uint scanID) const
Get the number of scan points in the theta (zenithal) direction.
Definition LiDAR.cpp:265
+
LiDARcloud::setHitData
void setHitData(uint index, const char *label, double value)
Get floating point data value associated with a hit point.
Definition LiDAR.cpp:335
+
LiDARcloud::setCellGtheta
void setCellGtheta(float Gtheta, uint index)
Set the average G(theta) value of a grid cell.
Definition LiDAR.cpp:1949
+
LiDARcloud::gapfillMisses
std::vector< helios::vec3 > gapfillMisses()
For scans that are missing points (e.g., sky points), this function will attempt to fill in missing p...
Definition LiDAR.cu:492
+
LiDARcloud::getHitScanID
int getHitScanID(uint index) const
Get the scan with which a hit is associated.
Definition LiDAR.cpp:385
+
LiDARcloud::getCellSize
helios::vec3 getCellSize(uint index) const
Get the size of a grid cell by its index.
Definition LiDAR.cpp:1829
+
LiDARcloud::getHitCount
uint getHitCount() const
Get the number of hit points in the point cloud.
Definition LiDAR.cpp:254
+
LiDARcloud::getCellCenter
helios::vec3 getCellCenter(uint index) const
Get the (x,y,z) coordinate of a grid cell by its index.
Definition LiDAR.cpp:1809
+
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
Definition LiDAR.cpp:171
+
LiDARcloud::calculateLeafAreaGPU_equal_weighting
void calculateLeafAreaGPU_equal_weighting(bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume using equal weighting method.
Definition LiDAR.cu:4029
+
LiDARcloud::getScanRangeTheta
helios::vec2 getScanRangeTheta(uint scanID) const
Get the range of scan directions in the theta (zenithal) direction.
Definition LiDAR.cpp:279
+
LiDARcloud::calculateSyntheticGtheta
std::vector< float > calculateSyntheticGtheta(helios::Context *context)
Calculate the G(theta) of all primitives in the context.
Definition LiDAR.cpp:1849
+
LiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(uint scanID) const
Divergence angle of the laser beam in radians.
Definition LiDAR.cpp:300
+
LiDARcloud::getTriangle
Triangulation getTriangle(uint index) const
Get hit point corresponding to first vertex of triangle.
Definition LiDAR.cpp:512
+
LiDARcloud::getCellRotation
float getCellRotation(uint index) const
Get the size of a grid cell by its index.
Definition LiDAR.cpp:1839
+
LiDARcloud::getScanOrigin
helios::vec3 getScanOrigin(uint scanID) const
Get the (x,y,z) scan origin.
Definition LiDAR.cpp:258
+
LiDARcloud::calculateLeafAreaGPU_testing
void calculateLeafAreaGPU_testing(int min_voxel_hits)
Calculate the leaf area for each grid volume.
Definition LiDAR.cu:1359
+
LiDARcloud::trunkReconstruction
void trunkReconstruction(const helios::vec3 &box_center, const helios::vec3 &box_size, float Lmax, float max_aspect_ratio)
Reconstruct the trunk of the tree. In order to do this, you must specify the center and size of a rec...
Definition LiDAR.cu:2838
+
LiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(uint index) const
Get ray direction of hit point in the scan based on its index.
Definition LiDAR.cpp:324
+
LiDARcloud::getScanCount
uint getScanCount()
Get number of scans in point cloud.
Definition LiDAR.cpp:135
+
LiDARcloud::doesHitDataExist
bool doesHitDataExist(uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition LiDAR.cpp:360
+
LiDARcloud::syntheticScan
void syntheticScan(helios::Context *context)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
Definition LiDAR.cu:3093
+
LiDARcloud::getScanSizePhi
uint getScanSizePhi(uint scanID) const
Get the number of scan points in the phi (azimuthal) direction.
Definition LiDAR.cpp:272
+
LiDARcloud::calculateHitGridCellGPU
void calculateHitGridCellGPU()
Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated v...
Definition LiDAR.cu:268
+
LiDARcloud::getScanRangePhi
helios::vec2 getScanRangePhi(uint scanID) const
Get the range of scan directions in the phi (azimuthal) direction.
Definition LiDAR.cpp:286
+
LiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition LiDAR.cpp:293
+
LiDARcloud::getScanColumnFormat
std::vector< std::string > getScanColumnFormat(uint scanID) const
Get the labels for columns in ASCII input/output file.
Definition LiDAR.cpp:307
+
LiDARcloud::getTriangleCount
uint getTriangleCount() const
Get the number of triangles formed by the triangulation.
Definition LiDAR.cpp:508
+
LiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition LiDAR.cpp:314
+
LiDARcloud::calculateLeafAreaGPU_synthetic
void calculateLeafAreaGPU_synthetic(helios::Context *context, bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume in a synthetic scan using several different method for e...
Definition LiDAR.cu:1690
+
LiDARcloud::peakFinder
std::vector< uint > peakFinder(std::vector< float > signal)
find the indices of the peaks of a vector of floats
Definition LiDAR.cu:4984
+
LiDARcloud::getCellGlobalAnchor
helios::vec3 getCellGlobalAnchor(uint index) const
Get the (x,y,z) coordinate of a grid global anchor by its index.
Definition LiDAR.cpp:1819
+
LiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU()
Calculate the leaf area for each grid volume.
Definition LiDAR.cu:897
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveColor
helios::RGBcolor getPrimitiveColor(uint UUID) const
Method to return the diffuse color of a Primitive.
Definition Context.cpp:7127
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition Context.cpp:7179
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getPrimitiveTextureSize
helios::int2 getPrimitiveTextureSize(uint UUID) const
Get the size (number of pixels) of primitive texture map image.
Definition Context.cpp:7167
+
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Context.cpp:2046
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition Context.cpp:7187
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::atan2_2pi
float atan2_2pi(float y, float x)
Four quadrant arc tangent between 0 and 2*pi.
Definition global.cpp:584
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition global.cpp:1084
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+ + +
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_li_d_a_r_8h.html b/doc/html/_li_d_a_r_8h.html index d8cb2851d..b6a9a92a4 100644 --- a/doc/html/_li_d_a_r_8h.html +++ b/doc/html/_li_d_a_r_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | @@ -120,9 +132,9 @@ - + - +

Functions

bool sortcol0 (const std::vector< double > &v0, const std::vector< double > &v1)
bool sortcol0 (const std::vector< double > &v0, const std::vector< double > &v1)
 
bool sortcol1 (const std::vector< double > &v0, const std::vector< double > &v1)
bool sortcol1 (const std::vector< double > &v0, const std::vector< double > &v1)
 

Detailed Description

@@ -142,19 +154,12 @@

bool sortcol0 ( - const std::vector< double > &  - v0, + const std::vector< double > & v0, - const std::vector< double > &  - v1  - - - - ) - + const std::vector< double > & v1 )

@@ -172,19 +177,12 @@

bool sortcol1 ( - const std::vector< double > &  - v0, + const std::vector< double > & v0, - const std::vector< double > &  - v1  - - - - ) - + const std::vector< double > & v1 )

@@ -196,7 +194,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_li_d_a_r_8h_source.html b/doc/html/_li_d_a_r_8h_source.html index de0f1f9c5..5c754aacb 100644 --- a/doc/html/_li_d_a_r_8h_source.html +++ b/doc/html/_li_d_a_r_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
LiDAR.h
@@ -101,6 +113,7 @@
21
22#include "s_hull_pro.h"
23
+
24template <class datatype> class HitTable {
25public:
26
@@ -160,7 +173,9 @@
80 std::vector<std::vector<datatype> > data;
81
82};
+
83
+
84struct HitPoint{
85 helios::vec3 position;
86 helios::SphericalCoord direction;
@@ -186,7 +201,9 @@
106 data = __data;
107 }
108};
+
109
+
110struct Triangulation{
111 helios::vec3 vertex0, vertex1, vertex2;
112 int ID0, ID1, ID2;
@@ -231,7 +248,9 @@
151
152 }
153};
+
154
+
155struct GridCell{
156 helios::vec3 center;
157 helios::vec3 global_anchor;
@@ -260,8 +279,10 @@
180 maximum_height = 0;
181 }
182};
+
183
185
+
188struct ScanMetadata{
189
191 ScanMetadata();
@@ -300,7 +321,9 @@
265 helios::int2 direction2rc(const helios::SphericalCoord &direction ) const;
266
267};
+
268
+
270class LiDARcloud{
271 private:
272
@@ -596,7 +619,7 @@
874 void triangulateHitPoints( float Lmax, float max_aspect_ratio );
875
876 //ERK
-
878
+
878
886 void triangulateHitPoints( float Lmax, float max_aspect_ratio, const char* scalar_field, float threshold, const char* comparator );
887
888
@@ -711,6 +734,7 @@
1141 std::vector<uint> peakFinder(std::vector<float> signal);
1142
1143};
+
1144
1145bool sortcol0( const std::vector<double>& v0, const std::vector<double>& v1 );
1146
@@ -719,131 +743,132 @@
1149#endif
-
HitTable
Definition: LiDAR.h:24
-
LiDARcloud
Primary class for terrestrial LiDAR scan.
Definition: LiDAR.h:270
-
LiDARcloud::getGridBoundingBox
void getGridBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all grid cells in the point cloud.
Definition: LiDAR.cpp:988
-
LiDARcloud::addTrianglesToVisualizer
void addTrianglesToVisualizer(Visualizer *visualizer) const
Add all triangles to the visualizer plug-in, and color them by their r-g-b color.
Definition: LiDAR.cpp:638
-
LiDARcloud::setHitGridCell
void setHitGridCell(uint index, int cell)
Set the grid cell in which the hit point resides.
Definition: LiDAR.cpp:426
-
LiDARcloud::LiDARcloud
LiDARcloud()
LiDAR point cloud constructor.
Definition: LiDAR.cpp:89
-
LiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition: LiDAR.cpp:521
-
LiDARcloud::calculateSyntheticLeafArea
std::vector< float > calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition: LiDAR.cu:3712
+ +
LiDARcloud
Primary class for terrestrial LiDAR scan.
Definition LiDAR.h:270
+
LiDARcloud::getGridBoundingBox
void getGridBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all grid cells in the point cloud.
Definition LiDAR.cpp:988
+
LiDARcloud::addTrianglesToVisualizer
void addTrianglesToVisualizer(Visualizer *visualizer) const
Add all triangles to the visualizer plug-in, and color them by their r-g-b color.
Definition LiDAR.cpp:638
+
LiDARcloud::setHitGridCell
void setHitGridCell(uint index, int cell)
Set the grid cell in which the hit point resides.
Definition LiDAR.cpp:426
+
LiDARcloud::LiDARcloud
LiDARcloud()
LiDAR point cloud constructor.
Definition LiDAR.cpp:89
+
LiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition LiDAR.cpp:521
+
LiDARcloud::calculateSyntheticLeafArea
std::vector< float > calculateSyntheticLeafArea(helios::Context *context)
Calculate the surface area of all primitives in the context.
Definition LiDAR.cu:3712
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::int2 &row_column, const helios::RGBcolor &color, const std::map< std::string, double > &data)
Specify a scan point as a hit by providing the (x,y,z) coordinates and row,column in scan table.
-
LiDARcloud::getHitGridCell
int getHitGridCell(uint index) const
Get the grid cell in which the hit point resides.
Definition: LiDAR.cpp:413
-
LiDARcloud::coordinateRotation
void coordinateRotation(const helios::SphericalCoord &rotation)
Rotate all points in the point cloud about the origin.
Definition: LiDAR.cpp:464
-
LiDARcloud::getHitData
double getHitData(uint index, const char *label) const
Set floating point data value associated with a hit point.
Definition: LiDAR.cpp:345
-
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition: LiDAR.cpp:1791
-
LiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition: LiDAR.cpp:585
-
LiDARcloud::exportPointCloud
void exportPointCloud(const char *filename)
Export to file all points in the point cloud to an ASCII text file following the column format specif...
Definition: fileIO.cpp:728
-
LiDARcloud::enableMessages
void enableMessages()
Enable all print messages to the screen.
Definition: LiDAR.cpp:104
-
LiDARcloud::setCellLeafArea
void setCellLeafArea(float area, uint index)
Set the leaf area of a grid cell in m^2.
Definition: LiDAR.cpp:1918
-
LiDARcloud::getHitIndex
int getHitIndex(uint scanID, uint row, uint column) const
Get the index of a scan point based on its row and column in the hit table.
Definition: LiDAR.cpp:395
-
LiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(uint index) const
Get the leaf area density of a grid cell in 1/m.
Definition: LiDAR.cpp:1938
-
LiDARcloud::getScanSizeTheta
uint getScanSizeTheta(uint scanID) const
Get the number of scan points in the theta (zenithal) direction.
Definition: LiDAR.cpp:265
-
LiDARcloud::exportTriangleAreas
void exportTriangleAreas(const char *filename)
Export to file the area of all triangles formed.
Definition: fileIO.cpp:562
-
LiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition: LiDAR.cpp:951
-
LiDARcloud::setHitData
void setHitData(uint index, const char *label, double value)
Get floating point data value associated with a hit point.
Definition: LiDAR.cpp:335
-
LiDARcloud::addTrunkReconstructionToContext
std::vector< uint > addTrunkReconstructionToContext(helios::Context *context) const
Add reconstructed trunk triangles to the Context.
Definition: LiDAR.cpp:925
-
LiDARcloud::setCellGtheta
void setCellGtheta(float Gtheta, uint index)
Set the average G(theta) value of a grid cell.
Definition: LiDAR.cpp:1949
-
LiDARcloud::addReconstructedTriangleGroupsToContext
std::vector< uint > addReconstructedTriangleGroupsToContext(helios::Context *context) const
Add triangle groups used in the direct reconstruction to the Context.
Definition: LiDAR.cpp:892
-
LiDARcloud::minPulseFilter
void minPulseFilter(const char *scalar)
Filter full-waveform data according to the minimum scalar value along each pulse. Any scalar value ca...
Definition: LiDAR.cpp:1230
-
LiDARcloud::gapfillMisses
std::vector< helios::vec3 > gapfillMisses()
For scans that are missing points (e.g., sky points), this function will attempt to fill in missing p...
Definition: LiDAR.cu:492
-
LiDARcloud::getCellGtheta
float getCellGtheta(uint index) const
Get the G(theta) of a grid cell.
Definition: LiDAR.cpp:1959
-
LiDARcloud::getHitScanID
int getHitScanID(uint index) const
Get the scan with which a hit is associated.
Definition: LiDAR.cpp:385
-
LiDARcloud::addTrianglesToContext
void addTrianglesToContext(helios::Context *context) const
Add triangle geometry to Helios context.
Definition: LiDAR.cpp:1772
-
LiDARcloud::getCellSize
helios::vec3 getCellSize(uint index) const
Get the size of a grid cell by its index.
Definition: LiDAR.cpp:1829
-
LiDARcloud::getHitCount
uint getHitCount() const
Get the number of hit points in the point cloud.
Definition: LiDAR.cpp:254
-
LiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition: fileIO.cpp:22
-
LiDARcloud::getCellCenter
helios::vec3 getCellCenter(uint index) const
Get the (x,y,z) coordinate of a grid cell by its index.
Definition: LiDAR.cpp:1809
-
LiDARcloud::exportLeafAreaDensities
void exportLeafAreaDensities(const char *filename)
Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid...
Definition: fileIO.cpp:688
-
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
Definition: LiDAR.cpp:171
-
LiDARcloud::coordinateShift
void coordinateShift(const helios::vec3 &shift)
Apply a translation to all points in the point cloud.
Definition: LiDAR.cpp:436
-
LiDARcloud::addGrid
void addGrid(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &ndiv, float rotation)
Add a grid to point cloud instead of reading in from an xml file.
Definition: LiDAR.cpp:674
+
LiDARcloud::getHitGridCell
int getHitGridCell(uint index) const
Get the grid cell in which the hit point resides.
Definition LiDAR.cpp:413
+
LiDARcloud::coordinateRotation
void coordinateRotation(const helios::SphericalCoord &rotation)
Rotate all points in the point cloud about the origin.
Definition LiDAR.cpp:464
+
LiDARcloud::getHitData
double getHitData(uint index, const char *label) const
Set floating point data value associated with a hit point.
Definition LiDAR.cpp:345
+
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition LiDAR.cpp:1791
+
LiDARcloud::addGridToVisualizer
void addGridToVisualizer(Visualizer *visualizer) const
Add all grid cells to the visualizer plug-in.
Definition LiDAR.cpp:585
+
LiDARcloud::exportPointCloud
void exportPointCloud(const char *filename)
Export to file all points in the point cloud to an ASCII text file following the column format specif...
Definition fileIO.cpp:728
+
LiDARcloud::enableMessages
void enableMessages()
Enable all print messages to the screen.
Definition LiDAR.cpp:104
+
LiDARcloud::setCellLeafArea
void setCellLeafArea(float area, uint index)
Set the leaf area of a grid cell in m^2.
Definition LiDAR.cpp:1918
+
LiDARcloud::getHitIndex
int getHitIndex(uint scanID, uint row, uint column) const
Get the index of a scan point based on its row and column in the hit table.
Definition LiDAR.cpp:395
+
LiDARcloud::getCellLeafAreaDensity
float getCellLeafAreaDensity(uint index) const
Get the leaf area density of a grid cell in 1/m.
Definition LiDAR.cpp:1938
+
LiDARcloud::getScanSizeTheta
uint getScanSizeTheta(uint scanID) const
Get the number of scan points in the theta (zenithal) direction.
Definition LiDAR.cpp:265
+
LiDARcloud::exportTriangleAreas
void exportTriangleAreas(const char *filename)
Export to file the area of all triangles formed.
Definition fileIO.cpp:562
+
LiDARcloud::getHitBoundingBox
void getHitBoundingBox(helios::vec3 &boxmin, helios::vec3 &boxmax) const
Form an axis-aligned bounding box for all hit points in the point cloud.
Definition LiDAR.cpp:951
+
LiDARcloud::setHitData
void setHitData(uint index, const char *label, double value)
Get floating point data value associated with a hit point.
Definition LiDAR.cpp:335
+
LiDARcloud::addTrunkReconstructionToContext
std::vector< uint > addTrunkReconstructionToContext(helios::Context *context) const
Add reconstructed trunk triangles to the Context.
Definition LiDAR.cpp:925
+
LiDARcloud::setCellGtheta
void setCellGtheta(float Gtheta, uint index)
Set the average G(theta) value of a grid cell.
Definition LiDAR.cpp:1949
+
LiDARcloud::addReconstructedTriangleGroupsToContext
std::vector< uint > addReconstructedTriangleGroupsToContext(helios::Context *context) const
Add triangle groups used in the direct reconstruction to the Context.
Definition LiDAR.cpp:892
+
LiDARcloud::minPulseFilter
void minPulseFilter(const char *scalar)
Filter full-waveform data according to the minimum scalar value along each pulse. Any scalar value ca...
Definition LiDAR.cpp:1230
+
LiDARcloud::gapfillMisses
std::vector< helios::vec3 > gapfillMisses()
For scans that are missing points (e.g., sky points), this function will attempt to fill in missing p...
Definition LiDAR.cu:492
+
LiDARcloud::getCellGtheta
float getCellGtheta(uint index) const
Get the G(theta) of a grid cell.
Definition LiDAR.cpp:1959
+
LiDARcloud::getHitScanID
int getHitScanID(uint index) const
Get the scan with which a hit is associated.
Definition LiDAR.cpp:385
+
LiDARcloud::addTrianglesToContext
void addTrianglesToContext(helios::Context *context) const
Add triangle geometry to Helios context.
Definition LiDAR.cpp:1772
+
LiDARcloud::getCellSize
helios::vec3 getCellSize(uint index) const
Get the size of a grid cell by its index.
Definition LiDAR.cpp:1829
+
LiDARcloud::getHitCount
uint getHitCount() const
Get the number of hit points in the point cloud.
Definition LiDAR.cpp:254
+
LiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition fileIO.cpp:22
+
LiDARcloud::getCellCenter
helios::vec3 getCellCenter(uint index) const
Get the (x,y,z) coordinate of a grid cell by its index.
Definition LiDAR.cpp:1809
+
LiDARcloud::exportLeafAreaDensities
void exportLeafAreaDensities(const char *filename)
Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid...
Definition fileIO.cpp:688
+
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
Definition LiDAR.cpp:171
+
LiDARcloud::coordinateShift
void coordinateShift(const helios::vec3 &shift)
Apply a translation to all points in the point cloud.
Definition LiDAR.cpp:436
+
LiDARcloud::addGrid
void addGrid(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &ndiv, float rotation)
Add a grid to point cloud instead of reading in from an xml file.
Definition LiDAR.cpp:674
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const helios::RGBcolor &color, const std::map< std::string, double > &data)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
-
LiDARcloud::calculateLeafAreaGPU_equal_weighting
void calculateLeafAreaGPU_equal_weighting(bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume using equal weighting method.
Definition: LiDAR.cu:4029
-
LiDARcloud::getScanRangeTheta
helios::vec2 getScanRangeTheta(uint scanID) const
Get the range of scan directions in the theta (zenithal) direction.
Definition: LiDAR.cpp:279
+
LiDARcloud::calculateLeafAreaGPU_equal_weighting
void calculateLeafAreaGPU_equal_weighting(bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume using equal weighting method.
Definition LiDAR.cu:4029
+
LiDARcloud::getScanRangeTheta
helios::vec2 getScanRangeTheta(uint scanID) const
Get the range of scan directions in the theta (zenithal) direction.
Definition LiDAR.cpp:279
LiDARcloud::~LiDARcloud
~LiDARcloud()
LiDAR point cloud destructor.
-
LiDARcloud::cropBeamsToGridAngleRange
void cropBeamsToGridAngleRange(uint source)
Delete hitpoints that do not pass through / intersect the voxel grid.
Definition: LiDAR.cpp:2494
-
LiDARcloud::firstHitFilter
void firstHitFilter()
Filter full-waveform data to include only the first hit per laser pulse. The resulting point cloud wi...
Definition: LiDAR.cpp:1296
-
LiDARcloud::exportLeafAreas
void exportLeafAreas(const char *filename)
Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
Definition: fileIO.cpp:668
-
LiDARcloud::calculateSyntheticGtheta
std::vector< float > calculateSyntheticGtheta(helios::Context *context)
Calculate the G(theta) of all primitives in the context.
Definition: LiDAR.cpp:1849
-
LiDARcloud::addLeafReconstructionToVisualizer
void addLeafReconstructionToVisualizer(Visualizer *visualizer) const
Add reconstructed leaves (triangles or alpha masks) to the visualizer plug-in.
Definition: LiDAR.cpp:751
-
LiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(uint scanID) const
Divergence angle of the laser beam in radians.
Definition: LiDAR.cpp:300
-
LiDARcloud::getTriangle
Triangulation getTriangle(uint index) const
Get hit point corresponding to first vertex of triangle.
Definition: LiDAR.cpp:512
-
LiDARcloud::addTrunkReconstructionToVisualizer
void addTrunkReconstructionToVisualizer(Visualizer *visualizer) const
Add trunk reconstruction to the visualizer plug-in. Colors reconstructed triangles by hit point color...
Definition: LiDAR.cpp:803
-
LiDARcloud::getCellRotation
float getCellRotation(uint index) const
Get the size of a grid cell by its index.
Definition: LiDAR.cpp:1839
-
LiDARcloud::scalarFilter
void scalarFilter(const char *scalar_field, float threshold, const char *comparator)
Filter hit points based on a scalar field given by a column in the ASCII data.
Definition: LiDAR.cpp:1074
-
LiDARcloud::maxPulseFilter
void maxPulseFilter(const char *scalar)
Filter full-waveform data according to the maximum scalar value along each pulse. Any scalar value ca...
Definition: LiDAR.cpp:1164
-
LiDARcloud::getScanOrigin
helios::vec3 getScanOrigin(uint scanID) const
Get the (x,y,z) scan origin.
Definition: LiDAR.cpp:258
-
LiDARcloud::calculateLeafAreaGPU_testing
void calculateLeafAreaGPU_testing(int min_voxel_hits)
Calculate the leaf area for each grid volume.
Definition: LiDAR.cu:1359
-
LiDARcloud::trunkReconstruction
void trunkReconstruction(const helios::vec3 &box_center, const helios::vec3 &box_size, float Lmax, float max_aspect_ratio)
Reconstruct the trunk of the tree. In order to do this, you must specify the center and size of a rec...
Definition: LiDAR.cu:2838
-
LiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(uint index) const
Get ray direction of hit point in the scan based on its index.
Definition: LiDAR.cpp:324
-
LiDARcloud::selfTest
int selfTest()
Self-test (unit test) function.
Definition: selfTest.cpp:21
-
LiDARcloud::getScanCount
uint getScanCount()
Get number of scans in point cloud.
Definition: LiDAR.cpp:135
-
LiDARcloud::doesHitDataExist
bool doesHitDataExist(uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition: LiDAR.cpp:360
-
LiDARcloud::syntheticScan
void syntheticScan(helios::Context *context)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
Definition: LiDAR.cu:3093
-
LiDARcloud::exportTriangleInclinationDistribution
void exportTriangleInclinationDistribution(const char *filename, uint Nbins)
Export to file discrete area-weighted inclination angle probability distribution based on the triangu...
Definition: fileIO.cpp:610
-
LiDARcloud::getScanSizePhi
uint getScanSizePhi(uint scanID) const
Get the number of scan points in the phi (azimuthal) direction.
Definition: LiDAR.cpp:272
-
LiDARcloud::getHitColor
helios::RGBcolor getHitColor(uint index) const
Get color of hit point.
Definition: LiDAR.cpp:375
-
LiDARcloud::calculateHitGridCellGPU
void calculateHitGridCellGPU()
Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated v...
Definition: LiDAR.cu:268
-
LiDARcloud::getScanRangePhi
helios::vec2 getScanRangePhi(uint scanID) const
Get the range of scan directions in the phi (azimuthal) direction.
Definition: LiDAR.cpp:286
-
LiDARcloud::lastHitFilter
void lastHitFilter()
Filter full-waveform data to include only the last hit per laser pulse. The resulting point cloud wil...
Definition: LiDAR.cpp:1336
-
LiDARcloud::leafReconstructionAlphaMask
void leafReconstructionAlphaMask(float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
Perform a leaf reconstruction based on texture-masked Patches within each gridcell....
Definition: LiDAR.cpp:2074
-
LiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition: LiDAR.cpp:293
-
LiDARcloud::addScan
uint addScan(ScanMetadata &newscan)
Add a LiDAR scan to the point cloud.
Definition: LiDAR.cpp:139
-
LiDARcloud::getScanColumnFormat
std::vector< std::string > getScanColumnFormat(uint scanID) const
Get the labels for columns in ASCII input/output file.
Definition: LiDAR.cpp:307
-
LiDARcloud::getTriangleCount
uint getTriangleCount() const
Get the number of triangles formed by the triangulation.
Definition: LiDAR.cpp:508
-
LiDARcloud::xyzFilter
void xyzFilter(float xmin, float xmax, float ymin, float ymax, float zmin, float zmax)
overloaded version of xyzFilter that defaults to deleting points outside the provided bounding box
Definition: LiDAR.cpp:1105
-
LiDARcloud::exportPointCloudPTX
void exportPointCloudPTX(const char *filename, uint scanID)
Export to file all points from a given scan to PTX file.
Definition: fileIO.cpp:843
-
LiDARcloud::triangulateHitPoints
void triangulateHitPoints(float Lmax, float max_aspect_ratio)
Perform triangulation on all hit points in point cloud.
Definition: LiDAR.cpp:1382
-
LiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition: LiDAR.cpp:314
-
LiDARcloud::calculateLeafAreaGPU_synthetic
void calculateLeafAreaGPU_synthetic(helios::Context *context, bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume in a synthetic scan using several different method for e...
Definition: LiDAR.cu:1690
-
LiDARcloud::addGridCell
void addGridCell(const helios::vec3 &center, const helios::vec3 &size, float rotation)
Add a cell to the grid.
Definition: LiDAR.cpp:1795
-
LiDARcloud::getCellLeafArea
float getCellLeafArea(uint index) const
Get the leaf area of a grid cell in m^2.
Definition: LiDAR.cpp:1928
-
LiDARcloud::deleteHitPoint
void deleteHitPoint(uint index)
Delete a hit point in the scan.
Definition: LiDAR.cpp:237
-
LiDARcloud::peakFinder
std::vector< uint > peakFinder(std::vector< float > signal)
find the indices of the peaks of a vector of floats
Definition: LiDAR.cu:4984
-
LiDARcloud::exportTriangleNormals
void exportTriangleNormals(const char *filename)
Export to file the normal vectors (nx,ny,nz) for all triangles formed.
Definition: fileIO.cpp:499
-
LiDARcloud::getCellGlobalAnchor
helios::vec3 getCellGlobalAnchor(uint index) const
Get the (x,y,z) coordinate of a grid global anchor by its index.
Definition: LiDAR.cpp:1819
-
LiDARcloud::reflectanceFilter
void reflectanceFilter(float minreflectance)
Filter scan by imposing a minimum reflectance value.
Definition: LiDAR.cpp:1055
-
LiDARcloud::addLeafReconstructionToContext
std::vector< uint > addLeafReconstructionToContext(helios::Context *context) const
Add reconstructed leaves (texture-masked patches) to the Context.
Definition: LiDAR.cpp:845
+
LiDARcloud::cropBeamsToGridAngleRange
void cropBeamsToGridAngleRange(uint source)
Delete hitpoints that do not pass through / intersect the voxel grid.
Definition LiDAR.cpp:2494
+
LiDARcloud::firstHitFilter
void firstHitFilter()
Filter full-waveform data to include only the first hit per laser pulse. The resulting point cloud wi...
Definition LiDAR.cpp:1296
+
LiDARcloud::exportLeafAreas
void exportLeafAreas(const char *filename)
Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
Definition fileIO.cpp:668
+
LiDARcloud::calculateSyntheticGtheta
std::vector< float > calculateSyntheticGtheta(helios::Context *context)
Calculate the G(theta) of all primitives in the context.
Definition LiDAR.cpp:1849
+
LiDARcloud::addLeafReconstructionToVisualizer
void addLeafReconstructionToVisualizer(Visualizer *visualizer) const
Add reconstructed leaves (triangles or alpha masks) to the visualizer plug-in.
Definition LiDAR.cpp:751
+
LiDARcloud::getScanBeamDivergence
float getScanBeamDivergence(uint scanID) const
Divergence angle of the laser beam in radians.
Definition LiDAR.cpp:300
+
LiDARcloud::getTriangle
Triangulation getTriangle(uint index) const
Get hit point corresponding to first vertex of triangle.
Definition LiDAR.cpp:512
+
LiDARcloud::addTrunkReconstructionToVisualizer
void addTrunkReconstructionToVisualizer(Visualizer *visualizer) const
Add trunk reconstruction to the visualizer plug-in. Colors reconstructed triangles by hit point color...
Definition LiDAR.cpp:803
+
LiDARcloud::getCellRotation
float getCellRotation(uint index) const
Get the size of a grid cell by its index.
Definition LiDAR.cpp:1839
+
LiDARcloud::scalarFilter
void scalarFilter(const char *scalar_field, float threshold, const char *comparator)
Filter hit points based on a scalar field given by a column in the ASCII data.
Definition LiDAR.cpp:1074
+
LiDARcloud::maxPulseFilter
void maxPulseFilter(const char *scalar)
Filter full-waveform data according to the maximum scalar value along each pulse. Any scalar value ca...
Definition LiDAR.cpp:1164
+
LiDARcloud::getScanOrigin
helios::vec3 getScanOrigin(uint scanID) const
Get the (x,y,z) scan origin.
Definition LiDAR.cpp:258
+
LiDARcloud::calculateLeafAreaGPU_testing
void calculateLeafAreaGPU_testing(int min_voxel_hits)
Calculate the leaf area for each grid volume.
Definition LiDAR.cu:1359
+
LiDARcloud::trunkReconstruction
void trunkReconstruction(const helios::vec3 &box_center, const helios::vec3 &box_size, float Lmax, float max_aspect_ratio)
Reconstruct the trunk of the tree. In order to do this, you must specify the center and size of a rec...
Definition LiDAR.cu:2838
+
LiDARcloud::getHitRaydir
helios::SphericalCoord getHitRaydir(uint index) const
Get ray direction of hit point in the scan based on its index.
Definition LiDAR.cpp:324
+
LiDARcloud::selfTest
int selfTest()
Self-test (unit test) function.
Definition selfTest.cpp:21
+
LiDARcloud::getScanCount
uint getScanCount()
Get number of scans in point cloud.
Definition LiDAR.cpp:135
+
LiDARcloud::doesHitDataExist
bool doesHitDataExist(uint index, const char *label) const
Check if scalar data exists for a hit point.
Definition LiDAR.cpp:360
+
LiDARcloud::syntheticScan
void syntheticScan(helios::Context *context)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
Definition LiDAR.cu:3093
+
LiDARcloud::exportTriangleInclinationDistribution
void exportTriangleInclinationDistribution(const char *filename, uint Nbins)
Export to file discrete area-weighted inclination angle probability distribution based on the triangu...
Definition fileIO.cpp:610
+
LiDARcloud::getScanSizePhi
uint getScanSizePhi(uint scanID) const
Get the number of scan points in the phi (azimuthal) direction.
Definition LiDAR.cpp:272
+
LiDARcloud::getHitColor
helios::RGBcolor getHitColor(uint index) const
Get color of hit point.
Definition LiDAR.cpp:375
+
LiDARcloud::calculateHitGridCellGPU
void calculateHitGridCellGPU()
Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated v...
Definition LiDAR.cu:268
+
LiDARcloud::getScanRangePhi
helios::vec2 getScanRangePhi(uint scanID) const
Get the range of scan directions in the phi (azimuthal) direction.
Definition LiDAR.cpp:286
+
LiDARcloud::lastHitFilter
void lastHitFilter()
Filter full-waveform data to include only the last hit per laser pulse. The resulting point cloud wil...
Definition LiDAR.cpp:1336
+
LiDARcloud::leafReconstructionAlphaMask
void leafReconstructionAlphaMask(float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
Perform a leaf reconstruction based on texture-masked Patches within each gridcell....
Definition LiDAR.cpp:2074
+
LiDARcloud::getScanBeamExitDiameter
float getScanBeamExitDiameter(uint scanID) const
Get the diameter of the laser beam at exit from the instrument.
Definition LiDAR.cpp:293
+
LiDARcloud::addScan
uint addScan(ScanMetadata &newscan)
Add a LiDAR scan to the point cloud.
Definition LiDAR.cpp:139
+
LiDARcloud::getScanColumnFormat
std::vector< std::string > getScanColumnFormat(uint scanID) const
Get the labels for columns in ASCII input/output file.
Definition LiDAR.cpp:307
+
LiDARcloud::getTriangleCount
uint getTriangleCount() const
Get the number of triangles formed by the triangulation.
Definition LiDAR.cpp:508
+
LiDARcloud::xyzFilter
void xyzFilter(float xmin, float xmax, float ymin, float ymax, float zmin, float zmax)
overloaded version of xyzFilter that defaults to deleting points outside the provided bounding box
Definition LiDAR.cpp:1105
+
LiDARcloud::exportPointCloudPTX
void exportPointCloudPTX(const char *filename, uint scanID)
Export to file all points from a given scan to PTX file.
Definition fileIO.cpp:843
+
LiDARcloud::triangulateHitPoints
void triangulateHitPoints(float Lmax, float max_aspect_ratio)
Perform triangulation on all hit points in point cloud.
Definition LiDAR.cpp:1382
+
LiDARcloud::getHitXYZ
helios::vec3 getHitXYZ(uint index) const
Get (x,y,z) coordinate of hit point by index.
Definition LiDAR.cpp:314
+
LiDARcloud::calculateLeafAreaGPU_synthetic
void calculateLeafAreaGPU_synthetic(helios::Context *context, bool beamoutput, bool fillAnalytic)
Calculate the leaf area for each grid volume in a synthetic scan using several different method for e...
Definition LiDAR.cu:1690
+
LiDARcloud::addGridCell
void addGridCell(const helios::vec3 &center, const helios::vec3 &size, float rotation)
Add a cell to the grid.
Definition LiDAR.cpp:1795
+
LiDARcloud::getCellLeafArea
float getCellLeafArea(uint index) const
Get the leaf area of a grid cell in m^2.
Definition LiDAR.cpp:1928
+
LiDARcloud::deleteHitPoint
void deleteHitPoint(uint index)
Delete a hit point in the scan.
Definition LiDAR.cpp:237
+
LiDARcloud::peakFinder
std::vector< uint > peakFinder(std::vector< float > signal)
find the indices of the peaks of a vector of floats
Definition LiDAR.cu:4984
+
LiDARcloud::exportTriangleNormals
void exportTriangleNormals(const char *filename)
Export to file the normal vectors (nx,ny,nz) for all triangles formed.
Definition fileIO.cpp:499
+
LiDARcloud::getCellGlobalAnchor
helios::vec3 getCellGlobalAnchor(uint index) const
Get the (x,y,z) coordinate of a grid global anchor by its index.
Definition LiDAR.cpp:1819
+
LiDARcloud::reflectanceFilter
void reflectanceFilter(float minreflectance)
Filter scan by imposing a minimum reflectance value.
Definition LiDAR.cpp:1055
+
LiDARcloud::addLeafReconstructionToContext
std::vector< uint > addLeafReconstructionToContext(helios::Context *context) const
Add reconstructed leaves (texture-masked patches) to the Context.
Definition LiDAR.cpp:845
LiDARcloud::addHitPoint
void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const std::map< std::string, double > &data)
Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
-
LiDARcloud::distanceFilter
void distanceFilter(float maxdistance)
Filter scan by imposing a maximum distance from the scanner.
Definition: LiDAR.cpp:1035
-
LiDARcloud::disableMessages
void disableMessages()
Disable all print messages to the screen except for fatal error messages.
Definition: LiDAR.cpp:100
-
LiDARcloud::exportGtheta
void exportGtheta(const char *filename)
Export to file the G(theta) value within each grid cell. Lines of the file correspond to each grid ce...
Definition: fileIO.cpp:708
-
LiDARcloud::addGridWireFrametoVisualizer
void addGridWireFrametoVisualizer(Visualizer *visualizer) const
Add wire frame of the grid to the visualizer plug-in.
Definition: LiDAR.cpp:716
-
LiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU()
Calculate the leaf area for each grid volume.
Definition: LiDAR.cu:897
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
- -
HitPoint
Definition: LiDAR.h:84
-
ScanMetadata
Structure containing metadata for a terrestrial scan.
Definition: LiDAR.h:188
-
ScanMetadata::phiMin
float phiMin
Minimum azimuthal angle of scan in radians.
Definition: LiDAR.h:227
-
ScanMetadata::thetaMin
float thetaMin
Minimum zenithal angle of scan in radians
Definition: LiDAR.h:214
-
ScanMetadata::origin
helios::vec3 origin
(x,y,z) coordinate of scanner location
Definition: LiDAR.h:235
-
ScanMetadata::thetaMax
float thetaMax
Maximum zenithal angle of scan in radians.
Definition: LiDAR.h:219
-
ScanMetadata::phiMax
float phiMax
Maximum azimuthal angle of scan in radians.
Definition: LiDAR.h:232
-
ScanMetadata::ScanMetadata
ScanMetadata()
Default LiDAR scan data structure.
Definition: LiDAR.cpp:21
+
LiDARcloud::distanceFilter
void distanceFilter(float maxdistance)
Filter scan by imposing a maximum distance from the scanner.
Definition LiDAR.cpp:1035
+
LiDARcloud::disableMessages
void disableMessages()
Disable all print messages to the screen except for fatal error messages.
Definition LiDAR.cpp:100
+
LiDARcloud::exportGtheta
void exportGtheta(const char *filename)
Export to file the G(theta) value within each grid cell. Lines of the file correspond to each grid ce...
Definition fileIO.cpp:708
+
LiDARcloud::addGridWireFrametoVisualizer
void addGridWireFrametoVisualizer(Visualizer *visualizer) const
Add wire frame of the grid to the visualizer plug-in.
Definition LiDAR.cpp:716
+
LiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU()
Calculate the leaf area for each grid volume.
Definition LiDAR.cu:897
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+ + +
ScanMetadata
Structure containing metadata for a terrestrial scan.
Definition LiDAR.h:188
+
ScanMetadata::phiMin
float phiMin
Minimum azimuthal angle of scan in radians.
Definition LiDAR.h:227
+
ScanMetadata::thetaMin
float thetaMin
Minimum zenithal angle of scan in radians
Definition LiDAR.h:214
+
ScanMetadata::origin
helios::vec3 origin
(x,y,z) coordinate of scanner location
Definition LiDAR.h:235
+
ScanMetadata::thetaMax
float thetaMax
Maximum zenithal angle of scan in radians.
Definition LiDAR.h:219
+
ScanMetadata::phiMax
float phiMax
Maximum azimuthal angle of scan in radians.
Definition LiDAR.h:232
+
ScanMetadata::ScanMetadata
ScanMetadata()
Default LiDAR scan data structure.
Definition LiDAR.cpp:21
ScanMetadata::ScanMetadata
ScanMetadata(const helios::vec3 &a_origin, uint a_Ntheta, float a_thetaMin, float a_thetaMax, uint a_Nphi, float a_phiMin, float a_phiMax, float a_exitDiameter, float a_beamDivergence, const std::vector< std::string > &a_columnFormat)
Create a LiDAR scan data structure.
-
ScanMetadata::Ntheta
uint Ntheta
Number of zenithal angles in scan (rows)
Definition: LiDAR.h:209
-
ScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition: LiDAR.h:241
-
ScanMetadata::Nphi
uint Nphi
Number of azimuthal angles in scan (columns)
Definition: LiDAR.h:222
-
ScanMetadata::data_file
std::string data_file
File containing hit point data.
Definition: LiDAR.h:206
-
ScanMetadata::direction2rc
helios::int2 direction2rc(const helios::SphericalCoord &direction) const
Convert the scan ray direction into (row,column) table index.
Definition: LiDAR.cpp:66
-
ScanMetadata::columnFormat
std::vector< std::string > columnFormat
Vector of strings specifying the columns of the scan ASCII file for input/output.
Definition: LiDAR.h:250
-
ScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition: LiDAR.h:247
-
ScanMetadata::rc2direction
helios::SphericalCoord rc2direction(uint row, uint column) const
Convert the (row,column) of hit point in a scan to a direction vector.
Definition: LiDAR.cpp:57
- -
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
+
ScanMetadata::Ntheta
uint Ntheta
Number of zenithal angles in scan (rows)
Definition LiDAR.h:209
+
ScanMetadata::exitDiameter
float exitDiameter
Diameter of laser pulse at exit from the scanner.
Definition LiDAR.h:241
+
ScanMetadata::Nphi
uint Nphi
Number of azimuthal angles in scan (columns)
Definition LiDAR.h:222
+
ScanMetadata::data_file
std::string data_file
File containing hit point data.
Definition LiDAR.h:206
+
ScanMetadata::direction2rc
helios::int2 direction2rc(const helios::SphericalCoord &direction) const
Convert the scan ray direction into (row,column) table index.
Definition LiDAR.cpp:66
+
ScanMetadata::columnFormat
std::vector< std::string > columnFormat
Vector of strings specifying the columns of the scan ASCII file for input/output.
Definition LiDAR.h:250
+
ScanMetadata::beamDivergence
float beamDivergence
Divergence angle of the laser beam in radians.
Definition LiDAR.h:247
+
ScanMetadata::rc2direction
helios::SphericalCoord rc2direction(uint row, uint column) const
Convert the (row,column) of hit point in a scan to a direction vector.
Definition LiDAR.cpp:57
+ +
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_li_d_a_r_doc.html b/doc/html/_li_d_a_r_doc.html index a8ac209f1..928fae3f8 100644 --- a/doc/html/_li_d_a_r_doc.html +++ b/doc/html/_li_d_a_r_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
LiDAR Point Cloud Plugin Documentation
+
LiDAR Point Cloud Plugin Documentation

Table of Contents

-
@@ -154,13 +214,13 @@

Package
-td
+
-td
+
-td + NVIDIA CUDA 9.0+ Mac OSX:
$ brew install Caskroom/cask/cuda
Use CUDA installer Use CUDA installer @@ -316,8 +376,8 @@

}
-
LiDARcloud
Primary class for terrestrial LiDAR scan.
Definition: LiDAR.h:270
-
LiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition: fileIO.cpp:22
+
LiDARcloud
Primary class for terrestrial LiDAR scan.
Definition LiDAR.h:270
+
LiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition fileIO.cpp:22

Establishing grid cells

Rectangular grid cells are used as the basis for processing point cloud data. For example, total leaf area (or leaf area density) may be calculated for each grid cell. Grid cells or "voxels" are parallelpiped volumes. The top and bottom faces are always horizontal, but the cells can be rotated in the azimuthal direction.

@@ -373,7 +433,7 @@

pointcloud.triangulateHitPoints( 0.05, 5 ); //Perform triangulation with Lmax=0.05 and maximum aspect ratio of 5
}
-
LiDARcloud::triangulateHitPoints
void triangulateHitPoints(float Lmax, float max_aspect_ratio)
Perform triangulation on all hit points in point cloud.
Definition: LiDAR.cpp:1382
+
LiDARcloud::triangulateHitPoints
void triangulateHitPoints(float Lmax, float max_aspect_ratio)
Perform triangulation on all hit points in point cloud.
Definition LiDAR.cpp:1382

Calculating leaf area for each grid cell

Using the triangulation and defined grid cells, the plug-in can calculate the leaf area (and leaf area density) for each grid cell. The algorithm for calculating leaf area is described in detail in Bailey and Mahaffee (2017b) (except that in the current implementation, weighting by the sine of the scan zenith direction has been removed).

@@ -395,8 +455,8 @@

pointcloud.calculateLeafAreaGPU(); //Calculate leaf area for each grid cell
}
-
LiDARcloud::gapfillMisses
std::vector< helios::vec3 > gapfillMisses()
For scans that are missing points (e.g., sky points), this function will attempt to fill in missing p...
Definition: LiDAR.cu:492
-
LiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU()
Calculate the leaf area for each grid volume.
Definition: LiDAR.cu:897
+
LiDARcloud::gapfillMisses
std::vector< helios::vec3 > gapfillMisses()
For scans that are missing points (e.g., sky points), this function will attempt to fill in missing p...
Definition LiDAR.cu:492
+
LiDARcloud::calculateLeafAreaGPU
void calculateLeafAreaGPU()
Calculate the leaf area for each grid volume.
Definition LiDAR.cu:897

Plant reconstruction

A leaf-by-leaf reconstruction can be performed for the plant of interest using the method described in Bailey and Ochoa (2018). The reconstruction utilizes the triangulation and leaf area computations to ensure the correct leaf angle and area distributions on average, and thus requires that these routines have been run before performing the reconstruction.

@@ -424,9 +484,9 @@

pointcloud.addLeafReconstructionToContext( &context );
}
-
LiDARcloud::leafReconstructionAlphaMask
void leafReconstructionAlphaMask(float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
Perform a leaf reconstruction based on texture-masked Patches within each gridcell....
Definition: LiDAR.cpp:2074
-
LiDARcloud::addLeafReconstructionToContext
std::vector< uint > addLeafReconstructionToContext(helios::Context *context) const
Add reconstructed leaves (texture-masked patches) to the Context.
Definition: LiDAR.cpp:845
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
+
LiDARcloud::leafReconstructionAlphaMask
void leafReconstructionAlphaMask(float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
Perform a leaf reconstruction based on texture-masked Patches within each gridcell....
Definition LiDAR.cpp:2074
+
LiDARcloud::addLeafReconstructionToContext
std::vector< uint > addLeafReconstructionToContext(helios::Context *context) const
Add reconstructed leaves (texture-masked patches) to the Context.
Definition LiDAR.cpp:845
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882

Generating Synthetic (Simulated) LiDAR Data

The LiDAR plug-in can simulate the measurements of discrete-return and full-waveform instruments based on the geometry in the Context. Ray-tracing is used to simulate the emission of radiation from the instrument, and based on ray-object intersection tests with primitive geometry in the model domain, the simulated hit points can be determined. Currently, only a rectangular scan pattern is supported.

@@ -434,7 +494,7 @@

For full-waveform data simulation, multiple rays are cast for a single laser beam pulse. The density of rays is Gaussian, with the peak at the center of the beam. The model will also record the target count, target index, and timestamp associated with each hit point.

XML parameter file

-

To generate synthetic discrete-return LiDAR data, first add all desired model geometry to the Context. Then declare an instance of the LiDARcloud class as above, and load an XML file containing the scan parameters. As in the case of importing a real point cloud dataset, the XML file must specify the scan origin and the scan resolution at a minimum (see above). However, in the case of synthetic data generation, you will not specify a filename to read containing point cloud data, as this data will be generated by the simulation. You can optionally specify the ASCII_format tag, which will determine which additional data fields should be recorded for each hit point. Valid hit point data fields are listed above in Loading scan data from file.

+

To generate synthetic discrete-return LiDAR data, first add all desired model geometry to the Context. Then declare an instance of the LiDARcloud class as above, and load an XML file containing the scan parameters. As in the case of importing a real point cloud dataset, the XML file must specify the scan origin and the scan resolution at a minimum (see above). However, in the case of synthetic data generation, you will not specify a filename to read containing point cloud data, as this data will be generated by the simulation. You can optionally specify the ASCII_format tag, which will determine which additional data fields should be recorded for each hit point. Valid hit point data fields are listed above in Loading scan data from file.

If no ASCII_format tag is provided in the XML file, the default is to record the (x,y,z) position of the hit point. If the function LiDARcloud::exportPointCloud() is called, it will export the simulated point cloud according to the provided ASCII_format tag (or the default if not provided).

Note that you can add multiple <scan></scan> blocks in a single XML file to perform multiple scans.

@@ -473,9 +533,9 @@

pointcloud.exportPointCloud( "/path/to/file.xyz" ); //write to ASCII file
}
-
LiDARcloud::exportPointCloud
void exportPointCloud(const char *filename)
Export to file all points in the point cloud to an ASCII text file following the column format specif...
Definition: fileIO.cpp:728
-
LiDARcloud::syntheticScan
void syntheticScan(helios::Context *context)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
Definition: LiDAR.cu:3093
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
+
LiDARcloud::exportPointCloud
void exportPointCloud(const char *filename)
Export to file all points in the point cloud to an ASCII text file following the column format specif...
Definition fileIO.cpp:728
+
LiDARcloud::syntheticScan
void syntheticScan(helios::Context *context)
Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
Definition LiDAR.cu:3093
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212

Synthetic waveform data

Generation of synthetic full-waveform data is similar to discrete-return, except that additional information is needed to define the scan and simulation. In the XML file, the user must specify the diameter of the laser beam at the scan origin using the <exitDiameter> </exitDiameter> tags, as well as the angle of beam divergence in radians using the <beamDivergence> </beamDivergence> tags. If the exit diameter value is not specified, the default value of 0 is used, which means that the model will revert to discrete-return data generation. If the beam divergence value is not specified, a default beam divergence of 0 will be assumed, which effectively just means that the beam will remain perfectly cylindrical with diameter of exitDiameter.

@@ -555,8 +615,8 @@

}
-
LiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition: LiDAR.cpp:521
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
+
LiDARcloud::addHitsToVisualizer
void addHitsToVisualizer(Visualizer *visualizer, uint pointsize) const
Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
Definition LiDAR.cpp:521
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275

Writing results to file

Results of data processing can be easily written to file for external analysis. The following table lists these functions. Data is written to an ASCII text file, where each line in the file corresponds to a different data point (e.g., hit point, triangle, etc.).

@@ -609,16 +669,17 @@

pointcloud.exportPointCloud( "../output/pointcloud.xyz" );
}
-
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition: LiDAR.cpp:1791
-
LiDARcloud::exportTriangleAreas
void exportTriangleAreas(const char *filename)
Export to file the area of all triangles formed.
Definition: fileIO.cpp:562
-
LiDARcloud::exportLeafAreaDensities
void exportLeafAreaDensities(const char *filename)
Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid...
Definition: fileIO.cpp:688
-
LiDARcloud::exportLeafAreas
void exportLeafAreas(const char *filename)
Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
Definition: fileIO.cpp:668
-
LiDARcloud::exportTriangleNormals
void exportTriangleNormals(const char *filename)
Export to file the normal vectors (nx,ny,nz) for all triangles formed.
Definition: fileIO.cpp:499
+
LiDARcloud::getGridCellCount
uint getGridCellCount() const
Get the number of cells in the grid.
Definition LiDAR.cpp:1791
+
LiDARcloud::exportTriangleAreas
void exportTriangleAreas(const char *filename)
Export to file the area of all triangles formed.
Definition fileIO.cpp:562
+
LiDARcloud::exportLeafAreaDensities
void exportLeafAreaDensities(const char *filename)
Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid...
Definition fileIO.cpp:688
+
LiDARcloud::exportLeafAreas
void exportLeafAreas(const char *filename)
Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
Definition fileIO.cpp:668
+
LiDARcloud::exportTriangleNormals
void exportTriangleNormals(const char *filename)
Export to file the normal vectors (nx,ny,nz) for all triangles formed.
Definition fileIO.cpp:499

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_making_masks.html b/doc/html/_making_masks.html index 68ed970b7..c24fe9906 100644 --- a/doc/html/_making_masks.html +++ b/doc/html/_making_masks.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Making texture mask files with transparency using GIMP
+
Making texture mask files with transparency using GIMP

GIMP (GNU Image Processing Program) is a free image processing program that makes creating mask files easy. The example below shows how to make a mask file for a leaf.

@@ -121,7 +133,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_overview.html b/doc/html/_overview.html index 45d681857..3b5028ee6 100644 --- a/doc/html/_overview.html +++ b/doc/html/_overview.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Overview
+
Overview

Table of Contents

-

@@ -139,7 +166,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_p_c_g_p_u_timeout.html b/doc/html/_p_c_g_p_u_timeout.html index 36ea111de..dcd2df5e2 100644 --- a/doc/html/_p_c_g_p_u_timeout.html +++ b/doc/html/_p_c_g_p_u_timeout.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Increasing graphics driver timeout
+
Increasing graphics driver timeout

By default, Windows constantly monitors the GPU and driver to make sure it is responding as expected (called Timeout Detection and Recovery, or TDR). If it does not respond after 2 seconds, it will reset the driver. This is problematic for general purpose GPU computing because intensive calculations may take longer than 2 seconds.

@@ -104,7 +116,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_photosynthesis_doc.html b/doc/html/_photosynthesis_doc.html index 4415bf2a5..4503c4ccf 100644 --- a/doc/html/_photosynthesis_doc.html +++ b/doc/html/_photosynthesis_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Photosynthesis Model Plugin Documentation
+
Photosynthesis Model Plugin Documentation

Table of Contents

-
@@ -202,7 +266,7 @@

photosynthesismodel.setModelType_Empirical();
}
- +

Farquhar, von Caemmerer, Berry Model Description

The model of Farquhar, von Caemmerer, and Berry (1980) is a biochemical model of photosynthesis. The form used here predicts photosynthetic production as a function of photoshynthetically active radiation flux, ambient CO2 concentration, and stomatal conductance, which may itself provide responses to a number of additional environmental variables.

@@ -366,7 +430,7 @@

afmc.setVcmax(1.5*fmc.getVcmaxTempResponse().value_at_25C, fmc.getVcmaxTempResponse().dHa);
photosynthesis.setModelCoefficients(afmc,almondleaves);
}
- +

Empirical Model Description

The net photosynthetic rate is described by the equation:

@@ -464,7 +528,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_photosynthesis_model_8cpp.html b/doc/html/_photosynthesis_model_8cpp.html index c526b8594..1de01f528 100644 --- a/doc/html/_photosynthesis_model_8cpp.html +++ b/doc/html/_photosynthesis_model_8cpp.html @@ -38,30 +38,41 @@

-
 v1.3.25 +
 v1.3.26
- + + + +
+
PhotosynthesisModel.cpp File Reference
@@ -106,7 +118,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_photosynthesis_model_8cpp_source.html b/doc/html/_photosynthesis_model_8cpp_source.html index 12f5ec21f..296462e45 100644 --- a/doc/html/_photosynthesis_model_8cpp_source.html +++ b/doc/html/_photosynthesis_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
PhotosynthesisModel.cpp
@@ -99,6 +111,7 @@
19using namespace std;
20using namespace helios;
21
+
22PhotosynthesisModel::PhotosynthesisModel(helios::Context *a_context) {
23 context = a_context;
24
@@ -113,6 +126,7 @@
33
34
35}
+
36
37int PhotosynthesisModel::selfTest() {
38
@@ -234,21 +248,28 @@
154 return 0;
155}
156
+
157void PhotosynthesisModel::setModelType_Empirical() {
158 model = "empirical";
159}
+
160
+
161void PhotosynthesisModel::setModelType_Farquhar() {
162 model = "farquhar";
163}
+
164
165
+
166void PhotosynthesisModel::setModelCoefficients(const EmpiricalModelCoefficients &modelcoefficients) {
167 empiricalmodelcoeffs = modelcoefficients;
168 empiricalmodel_coefficients.clear();
169 model = "empirical";
170}
+
171
+
172void PhotosynthesisModel::setModelCoefficients(const EmpiricalModelCoefficients &modelcoefficients,
173 const std::vector<uint> &UUIDs) {
174 for (uint UUID: UUIDs) {
@@ -256,13 +277,17 @@
176 }
177 model = "empirical";
178}
+
179
+
180void PhotosynthesisModel::setModelCoefficients(const FarquharModelCoefficients &modelcoefficients) {
181 farquharmodelcoeffs = modelcoefficients;
182 farquharmodel_coefficients.clear();
183 model = "farquhar";
184}
+
185
+
186void PhotosynthesisModel::setModelCoefficients(const FarquharModelCoefficients &modelcoefficients,
187 const std::vector<uint> &UUIDs) {
188 for (uint UUID: UUIDs) {
@@ -270,7 +295,9 @@
190 }
191 model = "farquhar";
192}
+
193
+
194void PhotosynthesisModel::setModelCoefficients(const std::vector<FarquharModelCoefficients> &modelcoefficients, const std::vector<uint> &UUIDs) {
195 if (modelcoefficients.size() != UUIDs.size()) {
196 printf("WARNING (PhotosynthesisModel::setModelCoefficients): number of model coefficients (%zu) does not match number of UUIDs (%zu).",
@@ -282,7 +309,9 @@
202 }
203 model = "farquhar";
204}
+
205
+
206void PhotosynthesisModel::setFarquharCoefficientsFromLibrary(const std::string &species) {
207 FarquharModelCoefficients fmc;
208 fmc = getFarquharCoefficientsFromLibrary(species);
@@ -290,7 +319,9 @@
210 farquharmodel_coefficients.clear();
211 model = "farquhar";
212}
+
213
+
214void PhotosynthesisModel::setFarquharCoefficientsFromLibrary(const std::string &species, const std::vector<uint> &UUIDs) {
215 FarquharModelCoefficients fmc;
216 fmc = getFarquharCoefficientsFromLibrary(species);
@@ -299,7 +330,9 @@
219 }
220 model = "farquhar";
221}
+
222
+
223FarquharModelCoefficients PhotosynthesisModel::getFarquharCoefficientsFromLibrary(const std::string &species) {
224 std::string s = std::move(species);
225 FarquharModelCoefficients fmc;
@@ -423,11 +456,15 @@
343 }
344 return fmc;
345}
+
346
+
347void PhotosynthesisModel::run() {
348 run(context->getAllUUIDs());
349}
+
350
+
351void PhotosynthesisModel::run(const std::vector<uint> &lUUIDs) {
352
353 for (uint UUID: lUUIDs) {
@@ -579,6 +616,7 @@
499
500
501}
+
502
503float PhotosynthesisModel::evaluateCi_Empirical(const EmpiricalModelCoefficients &params, float Ci, float CO2, float fL,
504 float Rd, float gM) const {
@@ -802,6 +840,7 @@
722
723}
724
+
725EmpiricalModelCoefficients PhotosynthesisModel::getEmpiricalModelCoefficients(uint UUID) {
726
727 EmpiricalModelCoefficients coeffs;
@@ -815,7 +854,9 @@
735 return coeffs;
736
737}
+
738
+
739FarquharModelCoefficients PhotosynthesisModel::getFarquharModelCoefficients(uint UUID) {
740
741 FarquharModelCoefficients coeffs;
@@ -829,15 +870,21 @@
749 return coeffs;
750
751}
+
752
+
753void PhotosynthesisModel::disableMessages(){
754 message_flag = false;
755}
+
756
+
757void PhotosynthesisModel::enableMessages(){
758 message_flag = true;
759}
+
760
+
761void PhotosynthesisModel::optionalOutputPrimitiveData(const char *label) {
762
763 if (strcmp(label, "Ci") == 0 || strcmp(label, "limitation_state") == 0 || strcmp(label, "Gamma_CO2") == 0) {
@@ -849,11 +896,15 @@
769 }
770
771}
+
772
+
776
+
777void PhotosynthesisModel::printDefaultValueReport(const std::vector<uint> &UUIDs) const {
778
779 size_t assumed_default_i = 0;
@@ -916,41 +967,43 @@
836 std::cout << "--------------------------------------------------" << std::endl;
837
838}
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
+
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
- -
PhotosynthesisModel::PhotosynthesisModel
PhotosynthesisModel(helios::Context *a_context)
Default constructor.
Definition: PhotosynthesisModel.cpp:22
-
PhotosynthesisModel::setFarquharCoefficientsFromLibrary
void setFarquharCoefficientsFromLibrary(const std::string &species)
Set the Farquhar-von Caemmerer-Berry model coefficients for all primitives based on a species from th...
Definition: PhotosynthesisModel.cpp:206
-
PhotosynthesisModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition: PhotosynthesisModel.cpp:753
-
PhotosynthesisModel::setModelType_Farquhar
void setModelType_Farquhar()
Sets photosynthesis to be calculated according to the Farquhar-von Caemmerer-Berry model.
Definition: PhotosynthesisModel.cpp:161
-
PhotosynthesisModel::setModelCoefficients
void setModelCoefficients(const EmpiricalModelCoefficients &modelcoefficients)
Set the empirical model coefficients for all primitives.
Definition: PhotosynthesisModel.cpp:166
-
PhotosynthesisModel::getEmpiricalModelCoefficients
EmpiricalModelCoefficients getEmpiricalModelCoefficients(uint UUID)
Get the current model coefficients for the empirical model.
Definition: PhotosynthesisModel.cpp:725
-
PhotosynthesisModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: PhotosynthesisModel.cpp:761
-
PhotosynthesisModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition: PhotosynthesisModel.cpp:773
-
PhotosynthesisModel::run
void run()
Run the model for all UUIDs in the Context.
Definition: PhotosynthesisModel.cpp:347
-
PhotosynthesisModel::enableMessages
void enableMessages()
Enable output messages to the standard output.
Definition: PhotosynthesisModel.cpp:757
-
PhotosynthesisModel::getFarquharCoefficientsFromLibrary
FarquharModelCoefficients getFarquharCoefficientsFromLibrary(const std::string &species)
Get Farquhar-von Caemmerer-Berry model coefficients for a species from the library.
Definition: PhotosynthesisModel.cpp:223
-
PhotosynthesisModel::setModelType_Empirical
void setModelType_Empirical()
Sets photosynthesis to be calculated according to the empirical model.
Definition: PhotosynthesisModel.cpp:157
-
PhotosynthesisModel::getFarquharModelCoefficients
FarquharModelCoefficients getFarquharModelCoefficients(uint UUID)
Get the current model coefficients for the Farquhar-von Caemmerer-Berry model.
Definition: PhotosynthesisModel.cpp:739
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition: global.cpp:2977
-
helios::clamp
anytype clamp(anytype value, anytype min, anytype max)
Clamp value to be within some specified bounds.
Definition: global.cpp:1055
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
- - - + +
PhotosynthesisModel::PhotosynthesisModel
PhotosynthesisModel(helios::Context *a_context)
Default constructor.
Definition PhotosynthesisModel.cpp:22
+
PhotosynthesisModel::setFarquharCoefficientsFromLibrary
void setFarquharCoefficientsFromLibrary(const std::string &species)
Set the Farquhar-von Caemmerer-Berry model coefficients for all primitives based on a species from th...
Definition PhotosynthesisModel.cpp:206
+
PhotosynthesisModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition PhotosynthesisModel.cpp:753
+
PhotosynthesisModel::setModelType_Farquhar
void setModelType_Farquhar()
Sets photosynthesis to be calculated according to the Farquhar-von Caemmerer-Berry model.
Definition PhotosynthesisModel.cpp:161
+
PhotosynthesisModel::setModelCoefficients
void setModelCoefficients(const EmpiricalModelCoefficients &modelcoefficients)
Set the empirical model coefficients for all primitives.
Definition PhotosynthesisModel.cpp:166
+
PhotosynthesisModel::getEmpiricalModelCoefficients
EmpiricalModelCoefficients getEmpiricalModelCoefficients(uint UUID)
Get the current model coefficients for the empirical model.
Definition PhotosynthesisModel.cpp:725
+
PhotosynthesisModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition PhotosynthesisModel.cpp:761
+
PhotosynthesisModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition PhotosynthesisModel.cpp:773
+
PhotosynthesisModel::run
void run()
Run the model for all UUIDs in the Context.
Definition PhotosynthesisModel.cpp:347
+
PhotosynthesisModel::enableMessages
void enableMessages()
Enable output messages to the standard output.
Definition PhotosynthesisModel.cpp:757
+
PhotosynthesisModel::getFarquharCoefficientsFromLibrary
FarquharModelCoefficients getFarquharCoefficientsFromLibrary(const std::string &species)
Get Farquhar-von Caemmerer-Berry model coefficients for a species from the library.
Definition PhotosynthesisModel.cpp:223
+
PhotosynthesisModel::setModelType_Empirical
void setModelType_Empirical()
Sets photosynthesis to be calculated according to the empirical model.
Definition PhotosynthesisModel.cpp:157
+
PhotosynthesisModel::getFarquharModelCoefficients
FarquharModelCoefficients getFarquharModelCoefficients(uint UUID)
Get the current model coefficients for the Farquhar-von Caemmerer-Berry model.
Definition PhotosynthesisModel.cpp:739
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition global.cpp:2977
+
helios::clamp
anytype clamp(anytype value, anytype min, anytype max)
Clamp value to be within some specified bounds.
Definition global.cpp:1055
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+ + +
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_photosynthesis_model_8h.html b/doc/html/_photosynthesis_model_8h.html index 931133cc8..b1e3bb70f 100644 --- a/doc/html/_photosynthesis_model_8h.html +++ b/doc/html/_photosynthesis_model_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Data Structures
@@ -119,7 +131,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_photosynthesis_model_8h_source.html b/doc/html/_photosynthesis_model_8h_source.html index cb4007ced..94f1cc648 100644 --- a/doc/html/_photosynthesis_model_8h_source.html +++ b/doc/html/_photosynthesis_model_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
PhotosynthesisModel.h
@@ -98,6 +110,7 @@
18
19#include "Context.h"
20
+
21struct PhotosyntheticTemperatureResponseParameters {
22 PhotosyntheticTemperatureResponseParameters() {
23 value_at_25C = 100.0f;
@@ -150,8 +163,10 @@
70 float Topt;
71
72};
+
73
74
+
75struct EmpiricalModelCoefficients {
76
77 EmpiricalModelCoefficients() {
@@ -188,7 +203,9 @@
108 float kC;
109
110};
+
111
+
112struct FarquharModelCoefficients {
113public:
114 FarquharModelCoefficients() {
@@ -322,13 +339,15 @@
242
243 friend class PhotosynthesisModel;
244};
+
245
246
+
247class PhotosynthesisModel {
248public:
249
251
-
254 explicit PhotosynthesisModel(helios::Context *a_context);
+
254 explicit PhotosynthesisModel(helios::Context *a_context);
255
256 int selfTest();
257
@@ -419,30 +438,33 @@
401 std::vector<std::string> output_prim_data;
402
403};
+
404
405#endif
- -
PhotosynthesisModel::setFarquharCoefficientsFromLibrary
void setFarquharCoefficientsFromLibrary(const std::string &species)
Set the Farquhar-von Caemmerer-Berry model coefficients for all primitives based on a species from th...
Definition: PhotosynthesisModel.cpp:206
-
PhotosynthesisModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition: PhotosynthesisModel.cpp:753
-
PhotosynthesisModel::setModelType_Farquhar
void setModelType_Farquhar()
Sets photosynthesis to be calculated according to the Farquhar-von Caemmerer-Berry model.
Definition: PhotosynthesisModel.cpp:161
-
PhotosynthesisModel::setModelCoefficients
void setModelCoefficients(const EmpiricalModelCoefficients &modelcoefficients)
Set the empirical model coefficients for all primitives.
Definition: PhotosynthesisModel.cpp:166
-
PhotosynthesisModel::getEmpiricalModelCoefficients
EmpiricalModelCoefficients getEmpiricalModelCoefficients(uint UUID)
Get the current model coefficients for the empirical model.
Definition: PhotosynthesisModel.cpp:725
-
PhotosynthesisModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: PhotosynthesisModel.cpp:761
-
PhotosynthesisModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition: PhotosynthesisModel.cpp:773
-
PhotosynthesisModel::run
void run()
Run the model for all UUIDs in the Context.
Definition: PhotosynthesisModel.cpp:347
-
PhotosynthesisModel::enableMessages
void enableMessages()
Enable output messages to the standard output.
Definition: PhotosynthesisModel.cpp:757
-
PhotosynthesisModel::getFarquharCoefficientsFromLibrary
FarquharModelCoefficients getFarquharCoefficientsFromLibrary(const std::string &species)
Get Farquhar-von Caemmerer-Berry model coefficients for a species from the library.
Definition: PhotosynthesisModel.cpp:223
-
PhotosynthesisModel::setModelType_Empirical
void setModelType_Empirical()
Sets photosynthesis to be calculated according to the empirical model.
Definition: PhotosynthesisModel.cpp:157
-
PhotosynthesisModel::getFarquharModelCoefficients
FarquharModelCoefficients getFarquharModelCoefficients(uint UUID)
Get the current model coefficients for the Farquhar-von Caemmerer-Berry model.
Definition: PhotosynthesisModel.cpp:739
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
- - - + +
PhotosynthesisModel::PhotosynthesisModel
PhotosynthesisModel(helios::Context *a_context)
Default constructor.
Definition PhotosynthesisModel.cpp:22
+
PhotosynthesisModel::setFarquharCoefficientsFromLibrary
void setFarquharCoefficientsFromLibrary(const std::string &species)
Set the Farquhar-von Caemmerer-Berry model coefficients for all primitives based on a species from th...
Definition PhotosynthesisModel.cpp:206
+
PhotosynthesisModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition PhotosynthesisModel.cpp:753
+
PhotosynthesisModel::setModelType_Farquhar
void setModelType_Farquhar()
Sets photosynthesis to be calculated according to the Farquhar-von Caemmerer-Berry model.
Definition PhotosynthesisModel.cpp:161
+
PhotosynthesisModel::setModelCoefficients
void setModelCoefficients(const EmpiricalModelCoefficients &modelcoefficients)
Set the empirical model coefficients for all primitives.
Definition PhotosynthesisModel.cpp:166
+
PhotosynthesisModel::getEmpiricalModelCoefficients
EmpiricalModelCoefficients getEmpiricalModelCoefficients(uint UUID)
Get the current model coefficients for the empirical model.
Definition PhotosynthesisModel.cpp:725
+
PhotosynthesisModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition PhotosynthesisModel.cpp:761
+
PhotosynthesisModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition PhotosynthesisModel.cpp:773
+
PhotosynthesisModel::run
void run()
Run the model for all UUIDs in the Context.
Definition PhotosynthesisModel.cpp:347
+
PhotosynthesisModel::enableMessages
void enableMessages()
Enable output messages to the standard output.
Definition PhotosynthesisModel.cpp:757
+
PhotosynthesisModel::getFarquharCoefficientsFromLibrary
FarquharModelCoefficients getFarquharCoefficientsFromLibrary(const std::string &species)
Get Farquhar-von Caemmerer-Berry model coefficients for a species from the library.
Definition PhotosynthesisModel.cpp:223
+
PhotosynthesisModel::setModelType_Empirical
void setModelType_Empirical()
Sets photosynthesis to be calculated according to the empirical model.
Definition PhotosynthesisModel.cpp:157
+
PhotosynthesisModel::getFarquharModelCoefficients
FarquharModelCoefficients getFarquharModelCoefficients(uint UUID)
Get the current model coefficients for the Farquhar-von Caemmerer-Berry model.
Definition PhotosynthesisModel.cpp:739
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+ + +
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_plant_architecture_8cpp.html b/doc/html/_plant_architecture_8cpp.html index 85982ee85..7d5cdf51b 100644 --- a/doc/html/_plant_architecture_8cpp.html +++ b/doc/html/_plant_architecture_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Functions
@@ -101,13 +113,13 @@ - + - + - +

Functions

float interpolateTube (const std::vector< float > &P, float frac)
float interpolateTube (const std::vector< float > &P, float frac)
 Interpolate the radius of a point along a tube.
 
helios::vec3 interpolateTube (const std::vector< vec3 > &P, float frac)
helios::vec3 interpolateTube (const std::vector< vec3 > &P, float frac)
 Interpolate the position of a point along a tube.
 
std::vector< uint > makeTubeFromCones (uint radial_subdivisions, const std::vector< helios::vec3 > &vertices, const std::vector< float > &radii, const std::vector< helios::RGBcolor > &colors, helios::Context *context_ptr)
std::vector< uint > makeTubeFromCones (uint radial_subdivisions, const std::vector< helios::vec3 > &vertices, const std::vector< float > &radii, const std::vector< helios::RGBcolor > &colors, helios::Context *context_ptr)
 

Detailed Description

@@ -127,19 +139,12 @@

float interpolateTube ( - const std::vector< float > &  - P, + const std::vector< float > & P, - float  - frac  - - - - ) - + float frac )

@@ -166,19 +171,12 @@

helios::vec3 interpolateTube ( - const std::vector< helios::vec3 > &  - P, + const std::vector< helios::vec3 > & P, - float  - frac  - - - - ) - + float frac )

@@ -205,37 +203,27 @@

std::vector< uint > makeTubeFromCones ( - uint  - radial_subdivisions, + uint radial_subdivisions, - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const std::vector< float > &  - radii, + const std::vector< float > & radii, - const std::vector< helios::RGBcolor > &  - colors, + const std::vector< helios::RGBcolor > & colors, - helios::Context *  - context_ptr  - - - - ) - + helios::Context * context_ptr )

@@ -247,7 +235,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_plant_architecture_8cpp_source.html b/doc/html/_plant_architecture_8cpp_source.html index c34d68e16..e00aec560 100644 --- a/doc/html/_plant_architecture_8cpp_source.html +++ b/doc/html/_plant_architecture_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
PlantArchitecture.cpp
@@ -99,6 +111,7 @@
19
20using namespace helios;
21
+
22float interpolateTube(const std::vector<float> &P, float frac) {
23 assert(frac>=0 && frac<=1);
24 assert(!P.empty());
@@ -124,7 +137,9 @@
44
45 return P.front();
46}
+
47
+
48helios::vec3 interpolateTube(const std::vector<vec3> &P, float frac) {
49 assert(frac>=0 && frac<=1);
50 assert(!P.empty());
@@ -155,7 +170,9 @@
75
76 return P.front();
77}
+
78
+
79PlantArchitecture::PlantArchitecture(helios::Context *context_ptr) : context_ptr(context_ptr) {
80 generator = context_ptr->getRandomGenerator();
81
@@ -169,7 +186,9 @@
89 output_object_data["fruitID"] = false;
90 output_object_data["carbohydrate_concentration"] = false;
91}
+
92
+
93LeafPrototype::LeafPrototype(std::minstd_rand0 *generator) : generator(generator) {
94
95 leaf_aspect_ratio.initialize( 1.f, generator);
@@ -191,10 +210,14 @@
111 }
112
113}
+
114
+
117
+
118PhytomerParameters::PhytomerParameters(std::minstd_rand0 *generator) {
119 //--- internode ---//
120 internode.pitch.initialize(20, generator);
@@ -245,10 +268,14 @@
165 inflorescence.fruit_gravity_factor_fraction.initialize(0, generator);
166 inflorescence.unique_prototypes = 1;
167}
+
168
+
171
+
172ShootParameters::ShootParameters(std::minstd_rand0 *generator) {
173 // ---- Geometric Parameters ---- //
174
@@ -288,6 +315,7 @@
208
209 determinate_shoot_growth = true;
210}
+
211
212void ShootParameters::defineChildShootTypes( const std::vector<std::string> &a_child_shoot_type_labels, const std::vector<float> &a_child_shoot_type_probabilities ){
213
@@ -303,6 +331,7 @@
223 this->child_shoot_type_probabilities = a_child_shoot_type_probabilities;
224}
225
+
226std::vector<uint> PlantArchitecture::buildPlantCanopyFromLibrary(const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate) {
227
228 if( plant_count_xy.x<=0 || plant_count_xy.y<=0 ){
@@ -323,7 +352,9 @@
243
244 return plantIDs;
245}
+
246
+
247void PlantArchitecture::defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params) {
248 if (this->shoot_types.find(shoot_type_label) != this->shoot_types.end()) { //shoot type already exists
249 this->shoot_types.at(shoot_type_label) = shoot_params;
@@ -331,6 +362,7 @@
251 this->shoot_types.emplace(shoot_type_label, shoot_params);
252 }
253}
+
254
255std::vector<helios::vec3> Phytomer::getInternodeNodePositions() const {
256 std::vector<vec3> nodes = parent_shoot_ptr->shoot_internode_vertices.at(shoot_index.x);
@@ -504,6 +536,7 @@
424 }
425}
426
+
427int Shoot::appendPhytomer(float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters) {
428
429 auto shoot_tree_ptr = &plantarchitecture_ptr->plant_instances.at(plantID).shoot_tree;
@@ -628,6 +661,7 @@
548
549 return (int) phytomers.size() - 1;
550}
+
551
552void Shoot::breakDormancy() {
553
@@ -752,6 +786,7 @@
672 return shoot_length;
673}
674
+
675void Shoot::updateShootNodes(bool update_context_geometry) {
676 // make shoot origin consistent with parent shoot node position
677 if( parent_shoot_ID>=0 ) { //only if not the base shoot
@@ -796,6 +831,7 @@
716 }
717 }
718}
+
719
720helios::vec3 Shoot::getShootAxisVector(float shoot_fraction) const {
721 uint phytomer_count = this->phytomers.size();
@@ -1132,7 +1168,7 @@
1052
1053 petiole_vertices.at(petiole).at(j) = petiole_vertices.at(petiole).at(j - 1) + dr_petiole.at(petiole) * petiole_axis_actual;
1054
-
1055 petiole_radii.at(petiole).at(j) = leaf_scale_factor_fraction * phytomer_parameters.petiole.radius.val() * (1.f - phytomer_parameters.petiole.taper.val() / float(Ndiv_petiole_length) * float(j) );
+
1055 petiole_radii.at(petiole).at(j) = leaf_scale_factor_fraction * phytomer_parameters.petiole.radius.val() * (1.f - phytomer_parameters.petiole.taper.val() / float(Ndiv_petiole_length) * float(j) );
1056 petiole_colors.at(j) = phytomer_parameters.petiole.color;
1057 }
1058
@@ -1663,6 +1699,7 @@
1583 parent_shoot_ptr->updateShootNodes(update_context_geometry);
1584}
1585
+
1586void Phytomer::scaleInternodeMaxLength(float scale_factor) {
1587 this->internode_length_max *= scale_factor;
1588
@@ -1673,16 +1710,22 @@
1593 current_internode_scale_factor = 1.f;
1594 }
1595}
+
1596
+
1597void Phytomer::setInternodeMaxLength(float internode_length_max_new) {
1598 float scale_factor = internode_length_max_new / this->internode_length_max;
1599 scaleInternodeMaxLength(scale_factor);
1600}
+
1601
+
1602void Phytomer::setInternodeMaxRadius(float internode_radius_max_new) {
1603 this->internode_radius_max = internode_radius_max_new;
1604}
+
1605
+
1606void Phytomer::setLeafScaleFraction(float leaf_scale_factor_fraction) {
1607 assert(leaf_scale_factor_fraction >= 0 && leaf_scale_factor_fraction <= 1);
1608
@@ -1746,7 +1789,9 @@
1666 }
1667 }
1668}
+
1669
+
1670void Phytomer::setLeafPrototypeScale(float leaf_prototype_scale) {
1671 float tip_ind = ceil(float(leaf_size_max.front().size() - 1) / 2.f);
1672 float scale_factor = leaf_prototype_scale / leaf_size_max.front().at(tip_ind);
@@ -1766,6 +1811,7 @@
1686 current_leaf_scale_factor = 1.f;
1687 }
1688}
+
1689
1690void Phytomer::scaleLeafPrototypeScale(float scale_factor) {
1691 if (scale_factor < 0.f) {
@@ -1874,6 +1920,7 @@
1794 }
1795}
1796
+
1797std::string Shoot::sampleChildShootType() const {
1798 auto shoot_ptr = this;
1799
@@ -1908,7 +1955,9 @@
1828 return child_shoot_type_label;
1829
1830}
+
1831
+
1832bool Shoot::sampleVegetativeBudBreak( uint node_index ) const {
1833
1834 if ( node_index>=phytomers.size() ) {
@@ -1922,9 +1971,9 @@
1842 if ( !shoot_parameters.growth_requires_dormancy && probability_decay<0 ) {
1843 bud_break_probability = probability_min;
1844 } else if ( probability_decay>0 ) { //probability maximum at apex
-
1845 bud_break_probability = std::max( probability_min, 1.f - probability_decay * float(this->current_node_number - node_index - 1) );
+
1845 bud_break_probability = std::fmax( probability_min, 1.f - probability_decay * float(this->current_node_number - node_index - 1) );
1846 } else if ( probability_decay<0 ) { //probability maximum at base
-
1847 bud_break_probability = std::max( probability_min, 1.f - fabs(probability_decay) * float(node_index) );
+
1847 bud_break_probability = std::fmax( probability_min, 1.f - fabs(probability_decay) * float(node_index) );
1848 } else {
1849 bud_break_probability = 1.f;
1850 }
@@ -1937,7 +1986,9 @@
1857 return bud_break;
1858
1859}
+
1860
+
1861uint Shoot::sampleEpicormicShoot( float dt, std::vector<float> &epicormic_positions_fraction ){
1862
1863 std::string epicormic_shoot_label = plantarchitecture_ptr->plant_instances.at(this->plantID).epicormic_shoot_probability_perlength_per_day.first;
@@ -1981,7 +2032,9 @@
1901
1902 return Nshoots;
1903}
+
1904
+
1905uint PlantArchitecture::addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction,
1906 float radius_taper, const std::string &shoot_type_label) {
1907
@@ -2012,7 +2065,9 @@
1932
1933 return shootID;
1934}
+
1935
+
1936uint PlantArchitecture::appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction,
1937 float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label) {
1938
@@ -2056,7 +2111,9 @@
1976
1977 return appended_shootID;
1978}
+
1979
+
1980uint PlantArchitecture::addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max,
1981 float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index) {
1982
@@ -2099,7 +2156,9 @@
2019
2020 return childID;
2021}
+
2022
+
2023uint PlantArchitecture::addEpicormicShoot(uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max,
2024 float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label) {
2025
@@ -2124,6 +2183,7 @@
2044 return addChildShoot(plantID, parent_shoot_ID, parent_node_index, current_node_number, base_rotation, internode_radius, internode_length_max, internode_length_scale_factor_fraction, leaf_scale_factor_fraction, radius_taper, shoot_type_label, 0);
2045
2046}
+
2047
2048void PlantArchitecture::validateShootTypes(ShootParameters &shoot_parameters) const {
2049 assert(shoot_parameters.child_shoot_type_probabilities.size() == shoot_parameters.child_shoot_type_labels.size());
@@ -2136,6 +2196,7 @@
2056 }
2057}
2058
+
2059int PlantArchitecture::appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction) {
2060
2061 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2200,7 +2261,9 @@
2120
2121 return pID;
2122}
+
2123
+
2124void PlantArchitecture::enableEpicormicChildShoots(uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday) {
2125
2126 if(shoot_types.find(epicormic_shoot_type_label) == shoot_types.end() ){
@@ -2214,22 +2277,31 @@
2134 plant_instances.at(plantID).epicormic_shoot_probability_perlength_per_day = std::make_pair(epicormic_shoot_type_label, epicormic_probability_perlength_perday);
2135
2136}
+
2137
+
2138void PlantArchitecture::disableInternodeContextBuild() {
2139 build_context_geometry_internode = false;
2140}
+
2141
+
2142void PlantArchitecture::disablePetioleContextBuild() {
2143 build_context_geometry_petiole = false;
2144}
+
2145
+
2146void PlantArchitecture::disablePeduncleContextBuild() {
2147 build_context_geometry_peduncle = false;
2148}
+
2149
+
2150void PlantArchitecture::enableGroundClipping(float ground_height) {
2151 ground_clipping_height = ground_height;
2152}
+
2153
2154void PlantArchitecture::incrementPhytomerInternodeGirth(uint plantID, uint shootID, uint node_number, bool update_context_geometry) {
2155
@@ -2315,6 +2387,7 @@
2235 return plant_instances.at(plantID).base_position;
2236}
2237
+
2238float PlantArchitecture::sumPlantLeafArea(uint plantID) const{
2239
2240 if( plantID>=plant_instances.size() ){
@@ -2330,6 +2403,7 @@
2250
2251 return area;
2252}
+
2253
2254void PlantArchitecture::setPlantAge(uint plantID, float a_current_age) {
2255 //\todo
@@ -2445,6 +2519,7 @@
2365 return taper;
2366}
2367
+
2368std::vector<uint> PlantArchitecture::getAllPlantObjectIDs(uint plantID) const{
2369
2370 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2475,11 +2550,15 @@
2395
2396 return objIDs;
2397}
+
2398
+
2399std::vector<uint> PlantArchitecture::getAllPlantUUIDs(uint plantID) const {
2400 return context_ptr->getObjectPrimitiveUUIDs(getAllPlantObjectIDs(plantID));
2401}
+
2402
+
2403std::vector<uint> PlantArchitecture::getPlantInternodeObjectIDs(uint plantID) const{
2404
2405 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2498,7 +2577,9 @@
2418
2419 return objIDs;
2420}
+
2421
+
2422std::vector<uint> PlantArchitecture::getPlantPetioleObjectIDs(uint plantID) const{
2423 if( plant_instances.find(plantID) == plant_instances.end() ){
2424 helios_runtime_error("ERROR (PlantArchitecture::getPlantPetioleObjectIDs): Plant with ID of " + std::to_string(plantID) + " does not exist.");
@@ -2518,7 +2599,9 @@
2438
2439 return objIDs;
2440}
+
2441
+
2442std::vector<uint> PlantArchitecture::getPlantLeafObjectIDs(uint plantID) const{
2443 if( plant_instances.find(plantID) == plant_instances.end() ){
2444 helios_runtime_error("ERROR (PlantArchitecture::getPlantLeafObjectIDs): Plant with ID of " + std::to_string(plantID) + " does not exist.");
@@ -2538,7 +2621,9 @@
2458
2459 return objIDs;
2460}
+
2461
+
2462std::vector<uint> PlantArchitecture::getPlantPeduncleObjectIDs(uint plantID) const{
2463
2464 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2561,7 +2646,9 @@
2481
2482 return objIDs;
2483}
+
2484
+
2485std::vector<uint> PlantArchitecture::getPlantFlowerObjectIDs(uint plantID) const{
2486
2487 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2586,7 +2673,9 @@
2506
2507 return objIDs;
2508}
+
2509
+
2510std::vector<uint> PlantArchitecture::getPlantFruitObjectIDs(uint plantID) const{
2511
2512 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2611,7 +2700,9 @@
2531
2532 return objIDs;
2533}
+
2534
+
2535std::vector<uint> PlantArchitecture::getAllUUIDs() const {
2536 std::vector<uint> UUIDs_all;
2537 for (const auto &instance: plant_instances) {
@@ -2620,7 +2711,9 @@
2540 }
2541 return UUIDs_all;
2542}
+
2543
+
2544std::vector<uint> PlantArchitecture::getAllLeafUUIDs() const {
2545 std::vector<uint> UUIDs_all;
2546 for (const auto &instance: plant_instances) {
@@ -2630,7 +2723,9 @@
2550 }
2551 return UUIDs_all;
2552}
+
2553
+
2554std::vector<uint> PlantArchitecture::getAllInternodeUUIDs() const {
2555 std::vector<uint> UUIDs_all;
2556 for (const auto &instance: plant_instances) {
@@ -2640,7 +2735,9 @@
2560 }
2561 return UUIDs_all;
2562}
+
2563
+
2564std::vector<uint> PlantArchitecture::getAllPetioleUUIDs() const {
2565 std::vector<uint> UUIDs_all;
2566 for (const auto &instance: plant_instances) {
@@ -2650,7 +2747,9 @@
2570 }
2571 return UUIDs_all;
2572}
+
2573
+
2574std::vector<uint> PlantArchitecture::getAllPeduncleUUIDs() const {
2575 std::vector<uint> UUIDs_all;
2576 for (const auto &instance: plant_instances) {
@@ -2660,7 +2759,9 @@
2580 }
2581 return UUIDs_all;
2582}
+
2583
+
2584std::vector<uint> PlantArchitecture::getAllFlowerUUIDs() const {
2585 std::vector<uint> UUIDs_all;
2586 for (const auto &instance: plant_instances) {
@@ -2670,7 +2771,9 @@
2590 }
2591 return UUIDs_all;
2592}
+
2593
+
2594std::vector<uint> PlantArchitecture::getAllFruitUUIDs() const {
2595 std::vector<uint> UUIDs_all;
2596 for (const auto &instance: plant_instances) {
@@ -2680,7 +2783,9 @@
2600 }
2601 return UUIDs_all;
2602}
+
2603
+
2604std::vector<uint> PlantArchitecture::getAllObjectIDs() const {
2605 std::vector<uint> objIDs_all;
2606 for (const auto &instance: plant_instances) {
@@ -2689,7 +2794,9 @@
2609 }
2610 return objIDs_all;
2611}
+
2612
+
2613uint PlantArchitecture::addPlantInstance(const helios::vec3 &base_position, float current_age) {
2614
2615 if( current_age<0 ){
@@ -2704,7 +2811,9 @@
2624
2625 return plant_count - 1;
2626}
+
2627
+
2628uint PlantArchitecture::duplicatePlantInstance(uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age) {
2629
2630 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2752,7 +2861,9 @@
2672
2673 return plantID_new;
2674}
+
2675
+
2676void PlantArchitecture::deletePlantInstance(uint plantID) {
2677 if (plant_instances.find(plantID) == plant_instances.end()) {
2678 return;
@@ -2762,13 +2873,17 @@
2682
2683 plant_instances.erase(plantID);
2684}
+
2685
+
2686void PlantArchitecture::deletePlantInstance(const std::vector<uint> &plantIDs) {
2687 for (uint ID: plantIDs) {
2688 deletePlantInstance(ID);
2689 }
2690}
+
2691
+
2692void PlantArchitecture::setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy,float max_leaf_lifespan, bool is_evergreen) {
2693
2694 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -2788,6 +2903,7 @@
2708 }
2709 plant_instances.at(plantID).is_evergreen = is_evergreen;
2710}
+
2711
2712void PlantArchitecture::disablePlantPhenology(uint plantID) {
2713 plant_instances.at(plantID).dd_to_dormancy_break = 0;
@@ -2798,6 +2914,7 @@
2718 plant_instances.at(plantID).dd_to_dormancy = 1e6;
2719}
2720
+
2721void PlantArchitecture::advanceTime(float time_step_days) {
2722 for (auto &plant: plant_instances) {
2723 uint plantID = plant.first;
@@ -2805,7 +2922,9 @@
2725 advanceTime(plantID, time_step_days);
2726 }
2727}
+
2728
+
2729void PlantArchitecture::advanceTime( int time_step_years, float time_step_days ) {
2730 for (auto &plant: plant_instances) {
2731 uint plantID = plant.first;
@@ -2813,7 +2932,9 @@
2733 advanceTime(plantID, float(time_step_years)*365.f+time_step_days);
2734 }
2735}
+
2736
+
2737void PlantArchitecture::advanceTime( uint plantID, float time_step_days ) {
2738
2739 if( plant_instances.find(plantID) == plant_instances.end() ){
@@ -3174,6 +3295,7 @@
3094 shoot_tree->front()->updateShootNodes(true);
3095
3096}
+
3097
3098std::vector<uint> makeTubeFromCones(uint radial_subdivisions, const std::vector<helios::vec3> &vertices, const std::vector<float> &radii, const std::vector<helios::RGBcolor> &colors, helios::Context *context_ptr) {
3099
@@ -3216,6 +3338,7 @@
3136 return false;
3137}
3138
+
3139void PlantArchitecture::optionalOutputObjectData( const std::string &object_data_label ){
3140 if( output_object_data.find(object_data_label)==output_object_data.end() ){
3141 std::cerr << "WARNING (PlantArchitecture::optionalOutputObjectData): Output object data of '" << object_data_label << "' is not a valid option." << std::endl;
@@ -3223,7 +3346,9 @@
3143 }
3144 output_object_data.at(object_data_label) = true;
3145}
+
3146
+
3147void PlantArchitecture::optionalOutputObjectData( const std::vector<std::string> &object_data_labels ){
3148 for( auto &label : object_data_labels){
3149 if( output_object_data.find(label)==output_object_data.end() ){
@@ -3233,144 +3358,146 @@
3153 output_object_data.at(label) = true;
3154 }
3155}
-
interpolateTube
helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition: CanopyGenerator.cpp:3251
-
interpolateTube
float interpolateTube(const std::vector< float > &P, float frac)
Interpolate the radius of a point along a tube.
Definition: PlantArchitecture.cpp:22
+
+
interpolateTube
helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition CanopyGenerator.cpp:3251
+
interpolateTube
float interpolateTube(const std::vector< float > &P, float frac)
Interpolate the radius of a point along a tube.
Definition PlantArchitecture.cpp:22
makeTubeFromCones
std::vector< uint > makeTubeFromCones(uint radial_subdivisions, const std::vector< helios::vec3 > &vertices, const std::vector< float > &radii, const std::vector< helios::RGBcolor > &colors, helios::Context *context_ptr)
Add geometry to the Context consisting of a series of Cone objects to form a tube-like shape.
- -
PlantArchitecture::setPlantPhenologicalThresholds
void setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
Specify the threshold values for plant phenological stages.
Definition: PlantArchitecture.cpp:2692
-
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition: PlantArchitecture.cpp:2613
-
PlantArchitecture::getAllFlowerUUIDs
std::vector< uint > getAllFlowerUUIDs() const
Get UUIDs for all existing flower primitives.
Definition: PlantArchitecture.cpp:2584
-
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition: PlantArchitecture.cpp:1980
-
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition: PlantArchitecture.cpp:2059
-
PlantArchitecture::getPlantFlowerObjectIDs
std::vector< uint > getPlantFlowerObjectIDs(uint plantID) const
Get object IDs for all inflorescence objects for a given plant.
Definition: PlantArchitecture.cpp:2485
-
PlantArchitecture::advanceTime
void advanceTime(float time_step_days)
Advance plant growth by a specified time interval for all plants.
Definition: PlantArchitecture.cpp:2721
-
PlantArchitecture::appendShoot
uint appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of...
Definition: PlantArchitecture.cpp:1936
-
PlantArchitecture::enableGroundClipping
void enableGroundClipping(float ground_height=0.f)
Enable automatic removal of organs that are below the ground plane.
Definition: PlantArchitecture.cpp:2150
-
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition: PlantArchitecture.cpp:1905
-
PlantArchitecture::getAllPlantUUIDs
std::vector< uint > getAllPlantUUIDs(uint plantID) const
Get primitive UUIDs for all primitives in a given plant.
Definition: PlantArchitecture.cpp:2399
-
PlantArchitecture::getPlantInternodeObjectIDs
std::vector< uint > getPlantInternodeObjectIDs(uint plantID) const
Get object IDs for all internode (Tube) objects for a given plant.
Definition: PlantArchitecture.cpp:2403
-
PlantArchitecture::getAllLeafUUIDs
std::vector< uint > getAllLeafUUIDs() const
Get UUIDs for all existing leaf primitives.
Definition: PlantArchitecture.cpp:2544
-
PlantArchitecture::getAllInternodeUUIDs
std::vector< uint > getAllInternodeUUIDs() const
Get UUIDs for all existing internode primitives.
Definition: PlantArchitecture.cpp:2554
-
PlantArchitecture::disablePeduncleContextBuild
void disablePeduncleContextBuild()
Do not build peduncle primitive geometry in the Context.
Definition: PlantArchitecture.cpp:2146
-
PlantArchitecture::deletePlantInstance
void deletePlantInstance(uint plantID)
Delete an existing plant instance.
Definition: PlantArchitecture.cpp:2676
-
PlantArchitecture::enableEpicormicChildShoots
void enableEpicormicChildShoots(uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday)
Enable shoot type to produce epicormic child shoots (water sprouts)
Definition: PlantArchitecture.cpp:2124
-
PlantArchitecture::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get object IDs for all existing plant compound objects.
Definition: PlantArchitecture.cpp:2604
-
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition: PlantArchitecture.cpp:247
-
PlantArchitecture::buildPlantCanopyFromLibrary
std::vector< uint > buildPlantCanopyFromLibrary(const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate=1.f)
Build a canopy of regularly spaced plants based on the model currently loaded from the library.
Definition: PlantArchitecture.cpp:226
-
PlantArchitecture::getAllFruitUUIDs
std::vector< uint > getAllFruitUUIDs() const
Get UUIDs for all existing fruit primitives.
Definition: PlantArchitecture.cpp:2594
-
PlantArchitecture::getPlantFruitObjectIDs
std::vector< uint > getPlantFruitObjectIDs(uint plantID) const
Get object IDs for all fruit objects for a given plant.
Definition: PlantArchitecture.cpp:2510
-
PlantArchitecture::disablePetioleContextBuild
void disablePetioleContextBuild()
Do not build petiole primitive geometry in the Context.
Definition: PlantArchitecture.cpp:2142
-
PlantArchitecture::PlantArchitecture
PlantArchitecture(helios::Context *context_ptr)
Main architectural model class constructor.
Definition: PlantArchitecture.cpp:79
-
PlantArchitecture::buildPlantInstanceFromLibrary
uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
Build a plant instance based on the model currently loaded from the library.
Definition: PlantLibrary.cpp:27
-
PlantArchitecture::optionalOutputObjectData
void optionalOutputObjectData(const std::string &object_data_label)
Add optional output object data values to the Context.
Definition: PlantArchitecture.cpp:3139
-
PlantArchitecture::duplicatePlantInstance
uint duplicatePlantInstance(uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age)
Duplicate an existing plant instance and specify its base position and age.
Definition: PlantArchitecture.cpp:2628
-
PlantArchitecture::getAllPlantObjectIDs
std::vector< uint > getAllPlantObjectIDs(uint plantID) const
Get object IDs for all organs objects for a given plant.
Definition: PlantArchitecture.cpp:2368
-
PlantArchitecture::getAllPeduncleUUIDs
std::vector< uint > getAllPeduncleUUIDs() const
Get UUIDs for all existing peduncle primitives.
Definition: PlantArchitecture.cpp:2574
-
PlantArchitecture::addEpicormicShoot
uint addEpicormicShoot(uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually add a child epicormic shoot (water sprout) at an arbitrary position along the shoot.
Definition: PlantArchitecture.cpp:2023
-
PlantArchitecture::sumPlantLeafArea
float sumPlantLeafArea(uint plantID) const
Sum the one-sided leaf area of all leaves in the plant.
Definition: PlantArchitecture.cpp:2238
-
PlantArchitecture::getPlantPetioleObjectIDs
std::vector< uint > getPlantPetioleObjectIDs(uint plantID) const
Get object IDs for all petiole (Tube) objects for a given plant.
Definition: PlantArchitecture.cpp:2422
-
PlantArchitecture::disableInternodeContextBuild
void disableInternodeContextBuild()
Do not build internode primitive geometry in the Context.
Definition: PlantArchitecture.cpp:2138
-
PlantArchitecture::getPlantPeduncleObjectIDs
std::vector< uint > getPlantPeduncleObjectIDs(uint plantID) const
Get object IDs for all peduncle (Tube) objects for a given plant.
Definition: PlantArchitecture.cpp:2462
-
PlantArchitecture::getPlantLeafObjectIDs
std::vector< uint > getPlantLeafObjectIDs(uint plantID) const
Get object IDs for all leaf objects for a given plant.
Definition: PlantArchitecture.cpp:2442
-
PlantArchitecture::getAllPetioleUUIDs
std::vector< uint > getAllPetioleUUIDs() const
Get UUIDs for all existing petiole primitives.
Definition: PlantArchitecture.cpp:2564
-
PlantArchitecture::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get UUIDs for all existing plant primitives.
Definition: PlantArchitecture.cpp:2535
-
helios::Cone::scaleLength
void scaleLength(float S)
Method to scale the length of the cone.
Definition: Context.cpp:4212
-
helios::Cone::scaleGirth
void scaleGirth(float S)
Method to scale the girth of the cone.
Definition: Context.cpp:4261
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition: Context.cpp:7139
-
helios::Context::scaleObjectAboutPoint
void scaleObjectAboutPoint(uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2897
-
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition: Context.cpp:2642
-
helios::Context::randn
float randn()
Draw a random number from a normal distribution with mean = 0, stddev = 1.
Definition: Context.cpp:1204
-
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition: Context.cpp:4123
-
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition: Context.cpp:2847
-
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition: Context_data.cpp:2299
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::getConeObjectNode
helios::vec3 getConeObjectNode(uint ObjID, int number) const
get a node of a Cone object from the context
Definition: Context.cpp:8262
-
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition: Context.cpp:8172
-
helios::Context::appendTubeSegment
void appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
Append a tube segment to an existing tube object.
Definition: Context.cpp:8180
-
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition: Context_data.cpp:2467
-
helios::Context::clearObjectData
void clearObjectData(uint objID, const char *label)
Clear primitive data for a single primitive based on its objID.
Definition: Context_data.cpp:3067
-
helios::Context::translateObject
void translateObject(uint ObjID, const vec3 &shift)
Translate a single compound object.
Definition: Context.cpp:2837
-
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition: Context.cpp:2907
-
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition: Context.cpp:49
-
helios::Context::hideObject
void hideObject(const std::vector< uint > &ObjIDs)
Hide compound objects in the Context such that their object IDs are not returned in Context::getAllOb...
Definition: Context.cpp:7901
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition: Context.cpp:2609
-
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition: Context.cpp:7920
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::Context::setTubeNodes
void setTubeNodes(uint ObjID, const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition: Context.cpp:8215
-
helios::Context::setTubeRadii
void setTubeRadii(uint ObjID, const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition: Context.cpp:8201
-
helios::Context::scaleObject
void scaleObject(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition: Context.cpp:2877
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::nullorigin
vec3 nullorigin
Default null vec3 that gives the origin (0,0,0)
Definition: global.cpp:58
-
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:4728
-
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition: Context.cpp:5426
-
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition: global.cpp:1943
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition: global.cpp:576
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition: global.cpp:1069
-
helios::asin_safe
float asin_safe(float x)
arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:247
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
- - - -
LeafPrototype::LeafPrototype
LeafPrototype()
Constructor - does not set random number generator.
Definition: PlantArchitecture.h:327
-
LeafPrototype::subdivisions
uint subdivisions
Leaf subdivision count in each direction.
Definition: PlantArchitecture.h:375
-
LeafPrototype::lateral_curvature
RandomParameter_float lateral_curvature
Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
Definition: PlantArchitecture.h:354
-
LeafPrototype::petiole_roll
RandomParameter_float petiole_roll
Creates a rolling at the leaf where the petiole attaches to the leaf blade.
Definition: PlantArchitecture.h:357
-
LeafPrototype::unique_prototypes
uint unique_prototypes
Number of unique prototypes to generate.
Definition: PlantArchitecture.h:378
-
LeafPrototype::build_petiolule
bool build_petiolule
Add a petiolule to the base of the leaflet.
Definition: PlantArchitecture.h:381
-
LeafPrototype::wave_period
RandomParameter_float wave_period
Period factor of leaf waves (sets how many waves there are along the leaf length)
Definition: PlantArchitecture.h:361
-
LeafPrototype::leaf_offset
helios::vec3 leaf_offset
Amount to shift the leaf.
Definition: PlantArchitecture.h:372
-
LeafPrototype::leaf_buckle_angle
RandomParameter_float leaf_buckle_angle
Angle of the leaf buckle (degrees)
Definition: PlantArchitecture.h:369
-
LeafPrototype::leaf_buckle_length
RandomParameter_float leaf_buckle_length
Fraction of the leaf length where the leaf buckles under its weight.
Definition: PlantArchitecture.h:367
-
LeafPrototype::midrib_fold_fraction
RandomParameter_float midrib_fold_fraction
Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded ...
Definition: PlantArchitecture.h:348
-
LeafPrototype::prototype_function
uint(* prototype_function)(helios::Context *, LeafPrototype *prototype_parameters, int compound_leaf_index)
Custom prototype function for creating leaf prototypes.
Definition: PlantArchitecture.h:330
-
LeafPrototype::wave_amplitude
RandomParameter_float wave_amplitude
Amplitude of leaf waves (sets the height of leaf waves)
Definition: PlantArchitecture.h:363
-
LeafPrototype::longitudinal_curvature
RandomParameter_float longitudinal_curvature
Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward,...
Definition: PlantArchitecture.h:352
-
Phytomer::setInternodeMaxLength
void setInternodeMaxLength(float internode_length_max_new)
Set the fully-elongated (maximum) internode length.
Definition: PlantArchitecture.cpp:1597
-
Phytomer::petiole_vertices
std::vector< std::vector< helios::vec3 > > petiole_vertices
Coordinates of internode tube segments. Index is tube segment within internode.
Definition: PlantArchitecture.h:896
-
Phytomer::setInternodeMaxRadius
void setInternodeMaxRadius(float internode_radius_max_new)
Set the maximum radius of the internode.
Definition: PlantArchitecture.cpp:1602
-
Phytomer::shoot_index
helios::int3 shoot_index
.x = index of phytomer along shoot, .y = current number of phytomers on parent shoot,...
Definition: PlantArchitecture.h:917
-
Phytomer::setLeafScaleFraction
void setLeafScaleFraction(float leaf_scale_factor_fraction)
Set the leaf scale as a fraction of its total fully-elongated scale factor. Value is uniformly applie...
Definition: PlantArchitecture.cpp:1606
-
Phytomer::setLeafPrototypeScale
void setLeafPrototypeScale(float leaf_prototype_scale)
Set the fully-elongated (maximum) leaf prototype scale. Value is uniformly applied for all leaves/lea...
Definition: PlantArchitecture.cpp:1670
-
Phytomer::scaleInternodeMaxLength
void scaleInternodeMaxLength(float scale_factor)
Scale the fully-elongated (maximum) internode length as a fraction of its current fully-elongated len...
Definition: PlantArchitecture.cpp:1586
- -
PhytomerParameters::PhytomerParameters
PhytomerParameters()
Default constructor - does not set random number generator.
Definition: PlantArchitecture.cpp:115
-
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition: PlantArchitecture.h:640
- - -
Shoot::updateShootNodes
void updateShootNodes(bool update_context_geometry=true)
Recalculate and apply the shoot's origin position and shift all downstream shoots.
Definition: PlantArchitecture.cpp:675
-
Shoot::appendPhytomer
int appendPhytomer(float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters)
Append a phytomer at the shoot apex.
Definition: PlantArchitecture.cpp:427
-
Shoot::sampleVegetativeBudBreak
bool sampleVegetativeBudBreak(uint node_index) const
Randomly sample whether a vegetative bud should break into a new shoot.
Definition: PlantArchitecture.cpp:1832
-
Shoot::sampleChildShootType
std::string sampleChildShootType() const
Randomly sample the type of a child shoot based on the probabilities defined in the shoot parameters.
Definition: PlantArchitecture.cpp:1797
-
Shoot::sampleEpicormicShoot
uint sampleEpicormicShoot(float dt, std::vector< float > &epicormic_positions_fraction)
Randomly sample whether the shoot should produce an epicormic shoot (water sprout) over timestep.
Definition: PlantArchitecture.cpp:1861
- -
ShootParameters::ShootParameters
ShootParameters()
Default constructor - does not set random number generator.
Definition: PlantArchitecture.cpp:169
-
ShootParameters::vegetative_bud_break_probability_decay_rate
RandomParameter_float vegetative_bud_break_probability_decay_rate
Definition: PlantArchitecture.h:709
- -
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
+ +
PlantArchitecture::setPlantPhenologicalThresholds
void setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
Specify the threshold values for plant phenological stages.
Definition PlantArchitecture.cpp:2692
+
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition PlantArchitecture.cpp:2613
+
PlantArchitecture::getAllFlowerUUIDs
std::vector< uint > getAllFlowerUUIDs() const
Get UUIDs for all existing flower primitives.
Definition PlantArchitecture.cpp:2584
+
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition PlantArchitecture.cpp:1980
+
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition PlantArchitecture.cpp:2059
+
PlantArchitecture::getPlantFlowerObjectIDs
std::vector< uint > getPlantFlowerObjectIDs(uint plantID) const
Get object IDs for all inflorescence objects for a given plant.
Definition PlantArchitecture.cpp:2485
+
PlantArchitecture::advanceTime
void advanceTime(float time_step_days)
Advance plant growth by a specified time interval for all plants.
Definition PlantArchitecture.cpp:2721
+
PlantArchitecture::appendShoot
uint appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of...
Definition PlantArchitecture.cpp:1936
+
PlantArchitecture::enableGroundClipping
void enableGroundClipping(float ground_height=0.f)
Enable automatic removal of organs that are below the ground plane.
Definition PlantArchitecture.cpp:2150
+
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition PlantArchitecture.cpp:1905
+
PlantArchitecture::getAllPlantUUIDs
std::vector< uint > getAllPlantUUIDs(uint plantID) const
Get primitive UUIDs for all primitives in a given plant.
Definition PlantArchitecture.cpp:2399
+
PlantArchitecture::getPlantInternodeObjectIDs
std::vector< uint > getPlantInternodeObjectIDs(uint plantID) const
Get object IDs for all internode (Tube) objects for a given plant.
Definition PlantArchitecture.cpp:2403
+
PlantArchitecture::getAllLeafUUIDs
std::vector< uint > getAllLeafUUIDs() const
Get UUIDs for all existing leaf primitives.
Definition PlantArchitecture.cpp:2544
+
PlantArchitecture::getAllInternodeUUIDs
std::vector< uint > getAllInternodeUUIDs() const
Get UUIDs for all existing internode primitives.
Definition PlantArchitecture.cpp:2554
+
PlantArchitecture::disablePeduncleContextBuild
void disablePeduncleContextBuild()
Do not build peduncle primitive geometry in the Context.
Definition PlantArchitecture.cpp:2146
+
PlantArchitecture::deletePlantInstance
void deletePlantInstance(uint plantID)
Delete an existing plant instance.
Definition PlantArchitecture.cpp:2676
+
PlantArchitecture::enableEpicormicChildShoots
void enableEpicormicChildShoots(uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday)
Enable shoot type to produce epicormic child shoots (water sprouts)
Definition PlantArchitecture.cpp:2124
+
PlantArchitecture::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get object IDs for all existing plant compound objects.
Definition PlantArchitecture.cpp:2604
+
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition PlantArchitecture.cpp:247
+
PlantArchitecture::buildPlantCanopyFromLibrary
std::vector< uint > buildPlantCanopyFromLibrary(const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate=1.f)
Build a canopy of regularly spaced plants based on the model currently loaded from the library.
Definition PlantArchitecture.cpp:226
+
PlantArchitecture::getAllFruitUUIDs
std::vector< uint > getAllFruitUUIDs() const
Get UUIDs for all existing fruit primitives.
Definition PlantArchitecture.cpp:2594
+
PlantArchitecture::getPlantFruitObjectIDs
std::vector< uint > getPlantFruitObjectIDs(uint plantID) const
Get object IDs for all fruit objects for a given plant.
Definition PlantArchitecture.cpp:2510
+
PlantArchitecture::disablePetioleContextBuild
void disablePetioleContextBuild()
Do not build petiole primitive geometry in the Context.
Definition PlantArchitecture.cpp:2142
+
PlantArchitecture::PlantArchitecture
PlantArchitecture(helios::Context *context_ptr)
Main architectural model class constructor.
Definition PlantArchitecture.cpp:79
+
PlantArchitecture::buildPlantInstanceFromLibrary
uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
Build a plant instance based on the model currently loaded from the library.
Definition PlantLibrary.cpp:27
+
PlantArchitecture::optionalOutputObjectData
void optionalOutputObjectData(const std::string &object_data_label)
Add optional output object data values to the Context.
Definition PlantArchitecture.cpp:3139
+
PlantArchitecture::duplicatePlantInstance
uint duplicatePlantInstance(uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age)
Duplicate an existing plant instance and specify its base position and age.
Definition PlantArchitecture.cpp:2628
+
PlantArchitecture::getAllPlantObjectIDs
std::vector< uint > getAllPlantObjectIDs(uint plantID) const
Get object IDs for all organs objects for a given plant.
Definition PlantArchitecture.cpp:2368
+
PlantArchitecture::getAllPeduncleUUIDs
std::vector< uint > getAllPeduncleUUIDs() const
Get UUIDs for all existing peduncle primitives.
Definition PlantArchitecture.cpp:2574
+
PlantArchitecture::addEpicormicShoot
uint addEpicormicShoot(uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually add a child epicormic shoot (water sprout) at an arbitrary position along the shoot.
Definition PlantArchitecture.cpp:2023
+
PlantArchitecture::sumPlantLeafArea
float sumPlantLeafArea(uint plantID) const
Sum the one-sided leaf area of all leaves in the plant.
Definition PlantArchitecture.cpp:2238
+
PlantArchitecture::getPlantPetioleObjectIDs
std::vector< uint > getPlantPetioleObjectIDs(uint plantID) const
Get object IDs for all petiole (Tube) objects for a given plant.
Definition PlantArchitecture.cpp:2422
+
PlantArchitecture::disableInternodeContextBuild
void disableInternodeContextBuild()
Do not build internode primitive geometry in the Context.
Definition PlantArchitecture.cpp:2138
+
PlantArchitecture::getPlantPeduncleObjectIDs
std::vector< uint > getPlantPeduncleObjectIDs(uint plantID) const
Get object IDs for all peduncle (Tube) objects for a given plant.
Definition PlantArchitecture.cpp:2462
+
PlantArchitecture::getPlantLeafObjectIDs
std::vector< uint > getPlantLeafObjectIDs(uint plantID) const
Get object IDs for all leaf objects for a given plant.
Definition PlantArchitecture.cpp:2442
+
PlantArchitecture::getAllPetioleUUIDs
std::vector< uint > getAllPetioleUUIDs() const
Get UUIDs for all existing petiole primitives.
Definition PlantArchitecture.cpp:2564
+
PlantArchitecture::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get UUIDs for all existing plant primitives.
Definition PlantArchitecture.cpp:2535
+
helios::Cone::scaleLength
void scaleLength(float S)
Method to scale the length of the cone.
Definition Context.cpp:4212
+
helios::Cone::scaleGirth
void scaleGirth(float S)
Method to scale the girth of the cone.
Definition Context.cpp:4261
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition Context.cpp:7139
+
helios::Context::scaleObjectAboutPoint
void scaleObjectAboutPoint(uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2897
+
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition Context.cpp:2642
+
helios::Context::randn
float randn()
Draw a random number from a normal distribution with mean = 0, stddev = 1.
Definition Context.cpp:1204
+
helios::Context::getConeObjectPointer
Cone * getConeObjectPointer(uint ObjID) const
Get a pointer to a Cone Compound Object.
Definition Context.cpp:4123
+
helios::Context::rotateObject
void rotateObject(uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
Rotate a single compound object about the x, y, or z axis.
Definition Context.cpp:2847
+
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition Context_data.cpp:2299
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::getConeObjectNode
helios::vec3 getConeObjectNode(uint ObjID, int number) const
get a node of a Cone object from the context
Definition Context.cpp:8262
+
helios::Context::getTubeObjectVolume
float getTubeObjectVolume(uint ObjID) const
get the volume of a Tube object from the context
Definition Context.cpp:8172
+
helios::Context::appendTubeSegment
void appendTubeSegment(uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
Append a tube segment to an existing tube object.
Definition Context.cpp:8180
+
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition Context_data.cpp:2467
+
helios::Context::clearObjectData
void clearObjectData(uint objID, const char *label)
Clear primitive data for a single primitive based on its objID.
Definition Context_data.cpp:3067
+
helios::Context::translateObject
void translateObject(uint ObjID, const vec3 &shift)
Translate a single compound object.
Definition Context.cpp:2837
+
helios::Context::getObjectPrimitiveUUIDs
std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
Get primitive UUIDs associated with compound object (single object ID input)
Definition Context.cpp:2907
+
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition Context.cpp:49
+
helios::Context::hideObject
void hideObject(const std::vector< uint > &ObjIDs)
Hide compound objects in the Context such that their object IDs are not returned in Context::getAllOb...
Definition Context.cpp:7901
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition Context.cpp:2609
+
helios::Context::getObjectArea
float getObjectArea(uint ObjID) const
Method to return the one-sided surface area of an object.
Definition Context.cpp:7920
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::Context::setTubeNodes
void setTubeNodes(uint ObjID, const std::vector< helios::vec3 > &node_xyz)
Set tube vertex coordinates at each segment node.
Definition Context.cpp:8215
+
helios::Context::setTubeRadii
void setTubeRadii(uint ObjID, const std::vector< float > &node_radii)
Set tube radii at each segment node.
Definition Context.cpp:8201
+
helios::Context::scaleObject
void scaleObject(uint ObjID, const helios::vec3 &scalefact)
Method to scale a compound object in the x-, y- and z-directions.
Definition Context.cpp:2877
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::nullorigin
vec3 nullorigin
Default null vec3 that gives the origin (0,0,0)
Definition global.cpp:58
+
helios::Context::addTubeObject
uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:4728
+
helios::Context::addConeObject
uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
Add a 3D cone compound object to the Context.
Definition Context.cpp:5426
+
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition global.cpp:1943
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition global.cpp:576
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition global.cpp:1069
+
helios::asin_safe
float asin_safe(float x)
arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:247
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+ + + +
LeafPrototype::LeafPrototype
LeafPrototype()
Constructor - does not set random number generator.
Definition PlantArchitecture.h:327
+
LeafPrototype::subdivisions
uint subdivisions
Leaf subdivision count in each direction.
Definition PlantArchitecture.h:375
+
LeafPrototype::lateral_curvature
RandomParameter_float lateral_curvature
Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
Definition PlantArchitecture.h:354
+
LeafPrototype::petiole_roll
RandomParameter_float petiole_roll
Creates a rolling at the leaf where the petiole attaches to the leaf blade.
Definition PlantArchitecture.h:357
+
LeafPrototype::unique_prototypes
uint unique_prototypes
Number of unique prototypes to generate.
Definition PlantArchitecture.h:378
+
LeafPrototype::build_petiolule
bool build_petiolule
Add a petiolule to the base of the leaflet.
Definition PlantArchitecture.h:381
+
LeafPrototype::wave_period
RandomParameter_float wave_period
Period factor of leaf waves (sets how many waves there are along the leaf length)
Definition PlantArchitecture.h:361
+
LeafPrototype::leaf_offset
helios::vec3 leaf_offset
Amount to shift the leaf.
Definition PlantArchitecture.h:372
+
LeafPrototype::leaf_buckle_angle
RandomParameter_float leaf_buckle_angle
Angle of the leaf buckle (degrees)
Definition PlantArchitecture.h:369
+
LeafPrototype::leaf_buckle_length
RandomParameter_float leaf_buckle_length
Fraction of the leaf length where the leaf buckles under its weight.
Definition PlantArchitecture.h:367
+
LeafPrototype::midrib_fold_fraction
RandomParameter_float midrib_fold_fraction
Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded ...
Definition PlantArchitecture.h:348
+
LeafPrototype::prototype_function
uint(* prototype_function)(helios::Context *, LeafPrototype *prototype_parameters, int compound_leaf_index)
Custom prototype function for creating leaf prototypes.
Definition PlantArchitecture.h:330
+
LeafPrototype::wave_amplitude
RandomParameter_float wave_amplitude
Amplitude of leaf waves (sets the height of leaf waves)
Definition PlantArchitecture.h:363
+
LeafPrototype::longitudinal_curvature
RandomParameter_float longitudinal_curvature
Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward,...
Definition PlantArchitecture.h:352
+
Phytomer::setInternodeMaxLength
void setInternodeMaxLength(float internode_length_max_new)
Set the fully-elongated (maximum) internode length.
Definition PlantArchitecture.cpp:1597
+
Phytomer::petiole_vertices
std::vector< std::vector< helios::vec3 > > petiole_vertices
Coordinates of internode tube segments. Index is tube segment within internode.
Definition PlantArchitecture.h:896
+
Phytomer::setInternodeMaxRadius
void setInternodeMaxRadius(float internode_radius_max_new)
Set the maximum radius of the internode.
Definition PlantArchitecture.cpp:1602
+
Phytomer::shoot_index
helios::int3 shoot_index
.x = index of phytomer along shoot, .y = current number of phytomers on parent shoot,...
Definition PlantArchitecture.h:917
+
Phytomer::setLeafScaleFraction
void setLeafScaleFraction(float leaf_scale_factor_fraction)
Set the leaf scale as a fraction of its total fully-elongated scale factor. Value is uniformly applie...
Definition PlantArchitecture.cpp:1606
+
Phytomer::setLeafPrototypeScale
void setLeafPrototypeScale(float leaf_prototype_scale)
Set the fully-elongated (maximum) leaf prototype scale. Value is uniformly applied for all leaves/lea...
Definition PlantArchitecture.cpp:1670
+
Phytomer::scaleInternodeMaxLength
void scaleInternodeMaxLength(float scale_factor)
Scale the fully-elongated (maximum) internode length as a fraction of its current fully-elongated len...
Definition PlantArchitecture.cpp:1586
+ +
PhytomerParameters::PhytomerParameters
PhytomerParameters()
Default constructor - does not set random number generator.
Definition PlantArchitecture.cpp:115
+
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition PlantArchitecture.h:640
+ + +
Shoot::updateShootNodes
void updateShootNodes(bool update_context_geometry=true)
Recalculate and apply the shoot's origin position and shift all downstream shoots.
Definition PlantArchitecture.cpp:675
+
Shoot::appendPhytomer
int appendPhytomer(float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters)
Append a phytomer at the shoot apex.
Definition PlantArchitecture.cpp:427
+
Shoot::sampleVegetativeBudBreak
bool sampleVegetativeBudBreak(uint node_index) const
Randomly sample whether a vegetative bud should break into a new shoot.
Definition PlantArchitecture.cpp:1832
+
Shoot::sampleChildShootType
std::string sampleChildShootType() const
Randomly sample the type of a child shoot based on the probabilities defined in the shoot parameters.
Definition PlantArchitecture.cpp:1797
+
Shoot::sampleEpicormicShoot
uint sampleEpicormicShoot(float dt, std::vector< float > &epicormic_positions_fraction)
Randomly sample whether the shoot should produce an epicormic shoot (water sprout) over timestep.
Definition PlantArchitecture.cpp:1861
+ +
ShootParameters::ShootParameters
ShootParameters()
Default constructor - does not set random number generator.
Definition PlantArchitecture.cpp:169
+
ShootParameters::vegetative_bud_break_probability_decay_rate
RandomParameter_float vegetative_bud_break_probability_decay_rate
Definition PlantArchitecture.h:709
+ +
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_plant_architecture_8h.html b/doc/html/_plant_architecture_8h.html index 2c1c7c49f..3eead998d 100644 --- a/doc/html/_plant_architecture_8h.html +++ b/doc/html/_plant_architecture_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | @@ -131,7 +143,7 @@ -

Enumerations

enum  BudState {
+
enum  BudState {
  BUD_DORMANT = 0 , BUD_ACTIVE = 1 , BUD_FLOWER_CLOSED = 2 @@ -145,9 +157,9 @@
- + - +

Functions

AxisRotation make_AxisRotation (float a_pitch, float a_yaw, float a_roll)
AxisRotation make_AxisRotation (float a_pitch, float a_yaw, float a_roll)
 
std::vector< uint > makeTubeFromCones (uint radial_subdivisions, const std::vector< helios::vec3 > &vertices, const std::vector< float > &radii, const std::vector< helios::RGBcolor > &colors, helios::Context *context_ptr)
std::vector< uint > makeTubeFromCones (uint radial_subdivisions, const std::vector< helios::vec3 > &vertices, const std::vector< float > &radii, const std::vector< helios::RGBcolor > &colors, helios::Context *context_ptr)
 Add geometry to the Context consisting of a series of Cone objects to form a tube-like shape.
 
@@ -188,25 +200,17 @@

AxisRotation make_AxisRotation ( - float  - a_pitch, + float a_pitch, - float  - a_yaw, + float a_yaw, - float  - a_roll  - - - - ) - + float a_roll ) @@ -229,37 +233,27 @@

std::vector< uint > makeTubeFromCones ( - uint  - radial_subdivisions, + uint radial_subdivisions, - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const std::vector< float > &  - radii, + const std::vector< float > & radii, - const std::vector< helios::RGBcolor > &  - colors, + const std::vector< helios::RGBcolor > & colors, - helios::Context *  - context_ptr  - - - - ) - + helios::Context * context_ptr )

@@ -282,7 +276,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_plant_architecture_8h_source.html b/doc/html/_plant_architecture_8h_source.html index 8a00cd952..c07e4da8c 100644 --- a/doc/html/_plant_architecture_8h_source.html +++ b/doc/html/_plant_architecture_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
PlantArchitecture.h
@@ -104,32 +116,39 @@
24struct Shoot;
25struct Phytomer;
26
+
27struct RandomParameter_float {
28public:
29
31
+
34 explicit RandomParameter_float(){
35 constval = 0.f;
36 distribution = "constant";
37 generator = nullptr;
38 sampled = false;
39 }
+
40
42
+
45 explicit RandomParameter_float( float val ){
46 constval = val;
47 distribution = "constant";
48 generator = nullptr;
49 sampled = false;
50 }
+
51
53
+
56 explicit RandomParameter_float( std::minstd_rand0 *rand_generator ){
57 constval = 0.f;
58 distribution = "constant";
59 generator = rand_generator;
60 sampled = false;
61 }
+
62
63 void initialize( float a_val, std::minstd_rand0 *rand_generator){
64 constval = a_val;
@@ -210,7 +229,9 @@
139
140 std::minstd_rand0 *generator;
141};
+
142
+
143struct RandomParameter_int {
144public:
145
@@ -288,7 +309,9 @@
217 std::vector<int> distribution_parameters;
218 std::minstd_rand0 *generator;
219};
+
220
+
221struct AxisRotation{
222public:
223
@@ -316,6 +339,7 @@
245 }
246
247};
+
248
249inline AxisRotation make_AxisRotation( float a_pitch, float a_yaw, float a_roll ) {
250 return {a_pitch,a_yaw,a_roll};
@@ -341,6 +365,7 @@
271
279std::vector<uint> makeTubeFromCones(uint radial_subdivisions, const std::vector<helios::vec3> &vertices, const std::vector<float> &radii, const std::vector<helios::RGBcolor> &colors, helios::Context *context_ptr);
280
+
281struct VegetativeBud{
282
283 //state of the bud
@@ -351,7 +376,9 @@
288 uint shoot_ID = -1;
289
290};
+
291
+
292struct FloralBud{
293
294 //state of the bud
@@ -379,7 +406,9 @@
316 std::vector<uint> peduncle_objIDs;
317 std::vector<uint> inflorescence_objIDs;
318};
+
319
+
320struct LeafPrototype {
321public:
322
@@ -401,17 +430,17 @@
348 RandomParameter_float midrib_fold_fraction;
349
350 // Parameters for leaf curvature
-
352 RandomParameter_float longitudinal_curvature;
+
352 RandomParameter_float longitudinal_curvature;
354 RandomParameter_float lateral_curvature;
355
357 RandomParameter_float petiole_roll;
358
359 // Parameters for leaf wave/wrinkles
-
361 RandomParameter_float wave_period;
+
361 RandomParameter_float wave_period;
363 RandomParameter_float wave_amplitude;
364
365 // Parameters for leaf buckling
-
367 RandomParameter_float leaf_buckle_length;
+
367 RandomParameter_float leaf_buckle_length;
369 RandomParameter_float leaf_buckle_angle;
370
372 helios::vec3 leaf_offset;
@@ -445,6 +474,7 @@
403 this->generator = a.generator;
404 }
405
+
407 LeafPrototype& operator=(const LeafPrototype &a){
408 if (this != &a) {
409 this->leaf_texture_file = a.leaf_texture_file;
@@ -480,6 +510,7 @@
439 }
440 return *this;
441 }
+
442
443 void sampleIdentifier() {
444 assert(generator!=nullptr);
@@ -492,7 +523,9 @@
451 std::minstd_rand0 *generator;
452
453};
+
454
+
455struct PhytomerParameters{
456private:
457
@@ -671,10 +704,10 @@
630 InflorescenceParameters inflorescence;
631
632 //Custom user-defined function that is called when a phytomer is created
-
640 void (*phytomer_creation_function)(std::shared_ptr<Phytomer> phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age) = nullptr;
+
640 void (*phytomer_creation_function)(std::shared_ptr<Phytomer> phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age) = nullptr;
641
642 //Custom user-defined function that is called for each phytomer on every time step
-
646 void (*phytomer_callback_function)(std::shared_ptr<Phytomer> phytomer_ptr) = nullptr;
+
646 void (*phytomer_callback_function)(std::shared_ptr<Phytomer> phytomer_ptr) = nullptr;
647
648
650 PhytomerParameters();
@@ -686,7 +719,9 @@
657 friend struct Shoot;
658
659};
+
660
+
661struct ShootParameters{
662
664 ShootParameters();
@@ -730,7 +765,7 @@
703 RandomParameter_float vegetative_bud_break_probability_min;
704
705 // Decay rate of the probability that a bud will break and form a new shoot
-
709 RandomParameter_float vegetative_bud_break_probability_decay_rate;
+
709 RandomParameter_float vegetative_bud_break_probability_decay_rate;
710
711 // Maximum number of floral buds at the shoot apex
712 RandomParameter_int max_terminal_floral_buds;
@@ -819,7 +854,9 @@
795 std::vector<float> child_shoot_type_probabilities;
796
797};
+
798
+
799struct Phytomer {
800public:
801
@@ -962,7 +999,9 @@
956 friend class PlantArchitecture;
957
958};
+
959
+
960struct Shoot {
961
962 Shoot(uint plant_ID, int shoot_ID, int parent_shoot_ID, uint parent_node, uint parent_petiole_index, uint rank, const helios::vec3 &shoot_base_position, const AxisRotation &shoot_base_rotation, uint current_node_number,
@@ -1057,7 +1096,9 @@
1071 helios::Context *context_ptr;
1072
1073};
+
1074
+
1075struct PlantInstance{
1076
1077 PlantInstance(const helios::vec3 &a_base_position, float a_current_age, helios::Context *a_context_ptr) : base_position(a_base_position), current_age(a_current_age), context_ptr(a_context_ptr) {}
@@ -1081,12 +1122,14 @@
1095 float max_age = 999;
1096
1097};
+
1098
+
1099class PlantArchitecture{
1100public:
1101
1103
-
1106 explicit PlantArchitecture( helios::Context* context_ptr );
+
1106 explicit PlantArchitecture( helios::Context* context_ptr );
1107
1109 static int selfTest();
1110
@@ -1446,114 +1489,117 @@
1687
1688
1689};
+
1690
1691#include "Assets.h"
1692
1693#endif //PLANT_ARCHITECTURE
makeTubeFromCones
std::vector< uint > makeTubeFromCones(uint radial_subdivisions, const std::vector< helios::vec3 > &vertices, const std::vector< float > &radii, const std::vector< helios::RGBcolor > &colors, helios::Context *context_ptr)
Add geometry to the Context consisting of a series of Cone objects to form a tube-like shape.
- -
PlantArchitecture::setPlantPhenologicalThresholds
void setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
Specify the threshold values for plant phenological stages.
Definition: PlantArchitecture.cpp:2692
-
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition: PlantArchitecture.cpp:2613
-
PlantArchitecture::getAllFlowerUUIDs
std::vector< uint > getAllFlowerUUIDs() const
Get UUIDs for all existing flower primitives.
Definition: PlantArchitecture.cpp:2584
-
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition: PlantArchitecture.cpp:1980
-
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition: PlantArchitecture.cpp:2059
-
PlantArchitecture::getCurrentShootParameters
std::map< std::string, ShootParameters > getCurrentShootParameters()
Get the shoot parameters structure for all shoot types in the current plant model.
Definition: PlantLibrary.cpp:99
-
PlantArchitecture::getPlantFlowerObjectIDs
std::vector< uint > getPlantFlowerObjectIDs(uint plantID) const
Get object IDs for all inflorescence objects for a given plant.
Definition: PlantArchitecture.cpp:2485
-
PlantArchitecture::advanceTime
void advanceTime(float time_step_days)
Advance plant growth by a specified time interval for all plants.
Definition: PlantArchitecture.cpp:2721
-
PlantArchitecture::updateCurrentShootParameters
void updateCurrentShootParameters(const std::string &shoot_type_label, const ShootParameters &params)
Update the parameters of a single shoot type in the current plant model.
Definition: PlantLibrary.cpp:117
-
PlantArchitecture::appendShoot
uint appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of...
Definition: PlantArchitecture.cpp:1936
-
PlantArchitecture::enableGroundClipping
void enableGroundClipping(float ground_height=0.f)
Enable automatic removal of organs that are below the ground plane.
Definition: PlantArchitecture.cpp:2150
-
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition: PlantArchitecture.cpp:1905
-
PlantArchitecture::getAllPlantUUIDs
std::vector< uint > getAllPlantUUIDs(uint plantID) const
Get primitive UUIDs for all primitives in a given plant.
Definition: PlantArchitecture.cpp:2399
-
PlantArchitecture::getPlantInternodeObjectIDs
std::vector< uint > getPlantInternodeObjectIDs(uint plantID) const
Get object IDs for all internode (Tube) objects for a given plant.
Definition: PlantArchitecture.cpp:2403
-
PlantArchitecture::getAllLeafUUIDs
std::vector< uint > getAllLeafUUIDs() const
Get UUIDs for all existing leaf primitives.
Definition: PlantArchitecture.cpp:2544
-
PlantArchitecture::selfTest
static int selfTest()
Unit test routines.
Definition: selfTest.cpp:21
-
PlantArchitecture::getAllInternodeUUIDs
std::vector< uint > getAllInternodeUUIDs() const
Get UUIDs for all existing internode primitives.
Definition: PlantArchitecture.cpp:2554
-
PlantArchitecture::disablePeduncleContextBuild
void disablePeduncleContextBuild()
Do not build peduncle primitive geometry in the Context.
Definition: PlantArchitecture.cpp:2146
-
PlantArchitecture::deletePlantInstance
void deletePlantInstance(uint plantID)
Delete an existing plant instance.
Definition: PlantArchitecture.cpp:2676
-
PlantArchitecture::enableEpicormicChildShoots
void enableEpicormicChildShoots(uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday)
Enable shoot type to produce epicormic child shoots (water sprouts)
Definition: PlantArchitecture.cpp:2124
-
PlantArchitecture::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get object IDs for all existing plant compound objects.
Definition: PlantArchitecture.cpp:2604
-
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition: PlantArchitecture.cpp:247
-
PlantArchitecture::buildPlantCanopyFromLibrary
std::vector< uint > buildPlantCanopyFromLibrary(const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate=1.f)
Build a canopy of regularly spaced plants based on the model currently loaded from the library.
Definition: PlantArchitecture.cpp:226
-
PlantArchitecture::getAllFruitUUIDs
std::vector< uint > getAllFruitUUIDs() const
Get UUIDs for all existing fruit primitives.
Definition: PlantArchitecture.cpp:2594
-
PlantArchitecture::getCurrentPhytomerParameters
std::map< std::string, PhytomerParameters > getCurrentPhytomerParameters()
Get the phytomer parameters structure for all shoot types in the current plant model.
Definition: PlantLibrary.cpp:106
-
PlantArchitecture::getPlantFruitObjectIDs
std::vector< uint > getPlantFruitObjectIDs(uint plantID) const
Get object IDs for all fruit objects for a given plant.
Definition: PlantArchitecture.cpp:2510
-
PlantArchitecture::disablePetioleContextBuild
void disablePetioleContextBuild()
Do not build petiole primitive geometry in the Context.
Definition: PlantArchitecture.cpp:2142
-
PlantArchitecture::buildPlantInstanceFromLibrary
uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
Build a plant instance based on the model currently loaded from the library.
Definition: PlantLibrary.cpp:27
-
PlantArchitecture::optionalOutputObjectData
void optionalOutputObjectData(const std::string &object_data_label)
Add optional output object data values to the Context.
Definition: PlantArchitecture.cpp:3139
-
PlantArchitecture::duplicatePlantInstance
uint duplicatePlantInstance(uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age)
Duplicate an existing plant instance and specify its base position and age.
Definition: PlantArchitecture.cpp:2628
-
PlantArchitecture::getAllPlantObjectIDs
std::vector< uint > getAllPlantObjectIDs(uint plantID) const
Get object IDs for all organs objects for a given plant.
Definition: PlantArchitecture.cpp:2368
-
PlantArchitecture::getAllPeduncleUUIDs
std::vector< uint > getAllPeduncleUUIDs() const
Get UUIDs for all existing peduncle primitives.
Definition: PlantArchitecture.cpp:2574
-
PlantArchitecture::loadPlantModelFromLibrary
void loadPlantModelFromLibrary(const std::string &plant_label)
Load an existing plant model from the library.
Definition: PlantLibrary.cpp:20
-
PlantArchitecture::addEpicormicShoot
uint addEpicormicShoot(uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually add a child epicormic shoot (water sprout) at an arbitrary position along the shoot.
Definition: PlantArchitecture.cpp:2023
-
PlantArchitecture::sumPlantLeafArea
float sumPlantLeafArea(uint plantID) const
Sum the one-sided leaf area of all leaves in the plant.
Definition: PlantArchitecture.cpp:2238
-
PlantArchitecture::getPlantPetioleObjectIDs
std::vector< uint > getPlantPetioleObjectIDs(uint plantID) const
Get object IDs for all petiole (Tube) objects for a given plant.
Definition: PlantArchitecture.cpp:2422
-
PlantArchitecture::disableInternodeContextBuild
void disableInternodeContextBuild()
Do not build internode primitive geometry in the Context.
Definition: PlantArchitecture.cpp:2138
-
PlantArchitecture::getPlantPeduncleObjectIDs
std::vector< uint > getPlantPeduncleObjectIDs(uint plantID) const
Get object IDs for all peduncle (Tube) objects for a given plant.
Definition: PlantArchitecture.cpp:2462
-
PlantArchitecture::getPlantLeafObjectIDs
std::vector< uint > getPlantLeafObjectIDs(uint plantID) const
Get object IDs for all leaf objects for a given plant.
Definition: PlantArchitecture.cpp:2442
-
PlantArchitecture::getAllPetioleUUIDs
std::vector< uint > getAllPetioleUUIDs() const
Get UUIDs for all existing petiole primitives.
Definition: PlantArchitecture.cpp:2564
-
PlantArchitecture::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get UUIDs for all existing plant primitives.
Definition: PlantArchitecture.cpp:2535
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition: global.cpp:1084
- - - -
LeafPrototype::LeafPrototype
LeafPrototype()
Constructor - does not set random number generator.
Definition: PlantArchitecture.h:327
-
LeafPrototype::subdivisions
uint subdivisions
Leaf subdivision count in each direction.
Definition: PlantArchitecture.h:375
-
LeafPrototype::operator=
LeafPrototype & operator=(const LeafPrototype &a)
Assignment operator.
Definition: PlantArchitecture.h:407
-
LeafPrototype::leaf_texture_file
std::map< int, std::string > leaf_texture_file
Image texture file for the leaf.
Definition: PlantArchitecture.h:342
-
LeafPrototype::lateral_curvature
RandomParameter_float lateral_curvature
Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
Definition: PlantArchitecture.h:354
-
LeafPrototype::petiole_roll
RandomParameter_float petiole_roll
Creates a rolling at the leaf where the petiole attaches to the leaf blade.
Definition: PlantArchitecture.h:357
-
LeafPrototype::unique_prototypes
uint unique_prototypes
Number of unique prototypes to generate.
Definition: PlantArchitecture.h:378
-
LeafPrototype::build_petiolule
bool build_petiolule
Add a petiolule to the base of the leaflet.
Definition: PlantArchitecture.h:381
-
LeafPrototype::wave_period
RandomParameter_float wave_period
Period factor of leaf waves (sets how many waves there are along the leaf length)
Definition: PlantArchitecture.h:361
-
LeafPrototype::leaf_offset
helios::vec3 leaf_offset
Amount to shift the leaf.
Definition: PlantArchitecture.h:372
-
LeafPrototype::leaf_buckle_angle
RandomParameter_float leaf_buckle_angle
Angle of the leaf buckle (degrees)
Definition: PlantArchitecture.h:369
-
LeafPrototype::leaf_buckle_length
RandomParameter_float leaf_buckle_length
Fraction of the leaf length where the leaf buckles under its weight.
Definition: PlantArchitecture.h:367
-
LeafPrototype::midrib_fold_fraction
RandomParameter_float midrib_fold_fraction
Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded ...
Definition: PlantArchitecture.h:348
-
LeafPrototype::prototype_function
uint(* prototype_function)(helios::Context *, LeafPrototype *prototype_parameters, int compound_leaf_index)
Custom prototype function for creating leaf prototypes.
Definition: PlantArchitecture.h:330
-
LeafPrototype::wave_amplitude
RandomParameter_float wave_amplitude
Amplitude of leaf waves (sets the height of leaf waves)
Definition: PlantArchitecture.h:363
-
LeafPrototype::OBJ_model_file
std::string OBJ_model_file
OBJ model file to load for the leaf.
Definition: PlantArchitecture.h:336
-
LeafPrototype::longitudinal_curvature
RandomParameter_float longitudinal_curvature
Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward,...
Definition: PlantArchitecture.h:352
- -
Phytomer::setInternodeMaxLength
void setInternodeMaxLength(float internode_length_max_new)
Set the fully-elongated (maximum) internode length.
Definition: PlantArchitecture.cpp:1597
-
Phytomer::petiole_vertices
std::vector< std::vector< helios::vec3 > > petiole_vertices
Coordinates of internode tube segments. Index is tube segment within internode.
Definition: PlantArchitecture.h:896
-
Phytomer::setInternodeMaxRadius
void setInternodeMaxRadius(float internode_radius_max_new)
Set the maximum radius of the internode.
Definition: PlantArchitecture.cpp:1602
-
Phytomer::shoot_index
helios::int3 shoot_index
.x = index of phytomer along shoot, .y = current number of phytomers on parent shoot,...
Definition: PlantArchitecture.h:917
-
Phytomer::setLeafScaleFraction
void setLeafScaleFraction(float leaf_scale_factor_fraction)
Set the leaf scale as a fraction of its total fully-elongated scale factor. Value is uniformly applie...
Definition: PlantArchitecture.cpp:1606
-
Phytomer::age
float age
Time since the phytomer was created.
Definition: PlantArchitecture.h:924
-
Phytomer::setLeafPrototypeScale
void setLeafPrototypeScale(float leaf_prototype_scale)
Set the fully-elongated (maximum) leaf prototype scale. Value is uniformly applied for all leaves/lea...
Definition: PlantArchitecture.cpp:1670
-
Phytomer::scaleInternodeMaxLength
void scaleInternodeMaxLength(float scale_factor)
Scale the fully-elongated (maximum) internode length as a fraction of its current fully-elongated len...
Definition: PlantArchitecture.cpp:1586
- -
PhytomerParameters::PhytomerParameters
PhytomerParameters()
Default constructor - does not set random number generator.
Definition: PlantArchitecture.cpp:115
-
PhytomerParameters::phytomer_callback_function
void(* phytomer_callback_function)(std::shared_ptr< Phytomer > phytomer_ptr)
Definition: PlantArchitecture.h:646
-
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition: PlantArchitecture.h:640
- -
RandomParameter_float
Definition: PlantArchitecture.h:27
-
RandomParameter_float::RandomParameter_float
RandomParameter_float()
Constructor initializing to a constant default value of 0.
Definition: PlantArchitecture.h:34
-
RandomParameter_float::RandomParameter_float
RandomParameter_float(std::minstd_rand0 *rand_generator)
Constructor initializing the random number generator.
Definition: PlantArchitecture.h:56
-
RandomParameter_float::RandomParameter_float
RandomParameter_float(float val)
Constructor initializing to a constant value.
Definition: PlantArchitecture.h:45
-
RandomParameter_int
Definition: PlantArchitecture.h:143
- -
Shoot::updateShootNodes
void updateShootNodes(bool update_context_geometry=true)
Recalculate and apply the shoot's origin position and shift all downstream shoots.
Definition: PlantArchitecture.cpp:675
-
Shoot::appendPhytomer
int appendPhytomer(float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters)
Append a phytomer at the shoot apex.
Definition: PlantArchitecture.cpp:427
-
Shoot::sampleVegetativeBudBreak
bool sampleVegetativeBudBreak(uint node_index) const
Randomly sample whether a vegetative bud should break into a new shoot.
Definition: PlantArchitecture.cpp:1832
-
Shoot::sampleChildShootType
std::string sampleChildShootType() const
Randomly sample the type of a child shoot based on the probabilities defined in the shoot parameters.
Definition: PlantArchitecture.cpp:1797
-
Shoot::sampleEpicormicShoot
uint sampleEpicormicShoot(float dt, std::vector< float > &epicormic_positions_fraction)
Randomly sample whether the shoot should produce an epicormic shoot (water sprout) over timestep.
Definition: PlantArchitecture.cpp:1861
- -
ShootParameters::ShootParameters
ShootParameters()
Default constructor - does not set random number generator.
Definition: PlantArchitecture.cpp:169
-
ShootParameters::vegetative_bud_break_probability_decay_rate
RandomParameter_float vegetative_bud_break_probability_decay_rate
Definition: PlantArchitecture.h:709
- -
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
PlantArchitecture::setPlantPhenologicalThresholds
void setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
Specify the threshold values for plant phenological stages.
Definition PlantArchitecture.cpp:2692
+
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition PlantArchitecture.cpp:2613
+
PlantArchitecture::getAllFlowerUUIDs
std::vector< uint > getAllFlowerUUIDs() const
Get UUIDs for all existing flower primitives.
Definition PlantArchitecture.cpp:2584
+
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition PlantArchitecture.cpp:1980
+
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition PlantArchitecture.cpp:2059
+
PlantArchitecture::getCurrentShootParameters
std::map< std::string, ShootParameters > getCurrentShootParameters()
Get the shoot parameters structure for all shoot types in the current plant model.
Definition PlantLibrary.cpp:99
+
PlantArchitecture::getPlantFlowerObjectIDs
std::vector< uint > getPlantFlowerObjectIDs(uint plantID) const
Get object IDs for all inflorescence objects for a given plant.
Definition PlantArchitecture.cpp:2485
+
PlantArchitecture::advanceTime
void advanceTime(float time_step_days)
Advance plant growth by a specified time interval for all plants.
Definition PlantArchitecture.cpp:2721
+
PlantArchitecture::updateCurrentShootParameters
void updateCurrentShootParameters(const std::string &shoot_type_label, const ShootParameters &params)
Update the parameters of a single shoot type in the current plant model.
Definition PlantLibrary.cpp:117
+
PlantArchitecture::appendShoot
uint appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of...
Definition PlantArchitecture.cpp:1936
+
PlantArchitecture::enableGroundClipping
void enableGroundClipping(float ground_height=0.f)
Enable automatic removal of organs that are below the ground plane.
Definition PlantArchitecture.cpp:2150
+
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition PlantArchitecture.cpp:1905
+
PlantArchitecture::getAllPlantUUIDs
std::vector< uint > getAllPlantUUIDs(uint plantID) const
Get primitive UUIDs for all primitives in a given plant.
Definition PlantArchitecture.cpp:2399
+
PlantArchitecture::getPlantInternodeObjectIDs
std::vector< uint > getPlantInternodeObjectIDs(uint plantID) const
Get object IDs for all internode (Tube) objects for a given plant.
Definition PlantArchitecture.cpp:2403
+
PlantArchitecture::getAllLeafUUIDs
std::vector< uint > getAllLeafUUIDs() const
Get UUIDs for all existing leaf primitives.
Definition PlantArchitecture.cpp:2544
+
PlantArchitecture::selfTest
static int selfTest()
Unit test routines.
Definition selfTest.cpp:21
+
PlantArchitecture::getAllInternodeUUIDs
std::vector< uint > getAllInternodeUUIDs() const
Get UUIDs for all existing internode primitives.
Definition PlantArchitecture.cpp:2554
+
PlantArchitecture::disablePeduncleContextBuild
void disablePeduncleContextBuild()
Do not build peduncle primitive geometry in the Context.
Definition PlantArchitecture.cpp:2146
+
PlantArchitecture::deletePlantInstance
void deletePlantInstance(uint plantID)
Delete an existing plant instance.
Definition PlantArchitecture.cpp:2676
+
PlantArchitecture::enableEpicormicChildShoots
void enableEpicormicChildShoots(uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday)
Enable shoot type to produce epicormic child shoots (water sprouts)
Definition PlantArchitecture.cpp:2124
+
PlantArchitecture::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get object IDs for all existing plant compound objects.
Definition PlantArchitecture.cpp:2604
+
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition PlantArchitecture.cpp:247
+
PlantArchitecture::buildPlantCanopyFromLibrary
std::vector< uint > buildPlantCanopyFromLibrary(const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate=1.f)
Build a canopy of regularly spaced plants based on the model currently loaded from the library.
Definition PlantArchitecture.cpp:226
+
PlantArchitecture::getAllFruitUUIDs
std::vector< uint > getAllFruitUUIDs() const
Get UUIDs for all existing fruit primitives.
Definition PlantArchitecture.cpp:2594
+
PlantArchitecture::getCurrentPhytomerParameters
std::map< std::string, PhytomerParameters > getCurrentPhytomerParameters()
Get the phytomer parameters structure for all shoot types in the current plant model.
Definition PlantLibrary.cpp:106
+
PlantArchitecture::getPlantFruitObjectIDs
std::vector< uint > getPlantFruitObjectIDs(uint plantID) const
Get object IDs for all fruit objects for a given plant.
Definition PlantArchitecture.cpp:2510
+
PlantArchitecture::disablePetioleContextBuild
void disablePetioleContextBuild()
Do not build petiole primitive geometry in the Context.
Definition PlantArchitecture.cpp:2142
+
PlantArchitecture::PlantArchitecture
PlantArchitecture(helios::Context *context_ptr)
Main architectural model class constructor.
Definition PlantArchitecture.cpp:79
+
PlantArchitecture::buildPlantInstanceFromLibrary
uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
Build a plant instance based on the model currently loaded from the library.
Definition PlantLibrary.cpp:27
+
PlantArchitecture::optionalOutputObjectData
void optionalOutputObjectData(const std::string &object_data_label)
Add optional output object data values to the Context.
Definition PlantArchitecture.cpp:3139
+
PlantArchitecture::duplicatePlantInstance
uint duplicatePlantInstance(uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age)
Duplicate an existing plant instance and specify its base position and age.
Definition PlantArchitecture.cpp:2628
+
PlantArchitecture::getAllPlantObjectIDs
std::vector< uint > getAllPlantObjectIDs(uint plantID) const
Get object IDs for all organs objects for a given plant.
Definition PlantArchitecture.cpp:2368
+
PlantArchitecture::getAllPeduncleUUIDs
std::vector< uint > getAllPeduncleUUIDs() const
Get UUIDs for all existing peduncle primitives.
Definition PlantArchitecture.cpp:2574
+
PlantArchitecture::loadPlantModelFromLibrary
void loadPlantModelFromLibrary(const std::string &plant_label)
Load an existing plant model from the library.
Definition PlantLibrary.cpp:20
+
PlantArchitecture::addEpicormicShoot
uint addEpicormicShoot(uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually add a child epicormic shoot (water sprout) at an arbitrary position along the shoot.
Definition PlantArchitecture.cpp:2023
+
PlantArchitecture::sumPlantLeafArea
float sumPlantLeafArea(uint plantID) const
Sum the one-sided leaf area of all leaves in the plant.
Definition PlantArchitecture.cpp:2238
+
PlantArchitecture::getPlantPetioleObjectIDs
std::vector< uint > getPlantPetioleObjectIDs(uint plantID) const
Get object IDs for all petiole (Tube) objects for a given plant.
Definition PlantArchitecture.cpp:2422
+
PlantArchitecture::disableInternodeContextBuild
void disableInternodeContextBuild()
Do not build internode primitive geometry in the Context.
Definition PlantArchitecture.cpp:2138
+
PlantArchitecture::getPlantPeduncleObjectIDs
std::vector< uint > getPlantPeduncleObjectIDs(uint plantID) const
Get object IDs for all peduncle (Tube) objects for a given plant.
Definition PlantArchitecture.cpp:2462
+
PlantArchitecture::getPlantLeafObjectIDs
std::vector< uint > getPlantLeafObjectIDs(uint plantID) const
Get object IDs for all leaf objects for a given plant.
Definition PlantArchitecture.cpp:2442
+
PlantArchitecture::getAllPetioleUUIDs
std::vector< uint > getAllPetioleUUIDs() const
Get UUIDs for all existing petiole primitives.
Definition PlantArchitecture.cpp:2564
+
PlantArchitecture::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get UUIDs for all existing plant primitives.
Definition PlantArchitecture.cpp:2535
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::mean
float mean(const std::vector< float > &vect)
Mean value of a vector of floats.
Definition global.cpp:1084
+ + + +
LeafPrototype::LeafPrototype
LeafPrototype()
Constructor - does not set random number generator.
Definition PlantArchitecture.h:327
+
LeafPrototype::subdivisions
uint subdivisions
Leaf subdivision count in each direction.
Definition PlantArchitecture.h:375
+
LeafPrototype::operator=
LeafPrototype & operator=(const LeafPrototype &a)
Assignment operator.
Definition PlantArchitecture.h:407
+
LeafPrototype::leaf_texture_file
std::map< int, std::string > leaf_texture_file
Image texture file for the leaf.
Definition PlantArchitecture.h:342
+
LeafPrototype::lateral_curvature
RandomParameter_float lateral_curvature
Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
Definition PlantArchitecture.h:354
+
LeafPrototype::petiole_roll
RandomParameter_float petiole_roll
Creates a rolling at the leaf where the petiole attaches to the leaf blade.
Definition PlantArchitecture.h:357
+
LeafPrototype::unique_prototypes
uint unique_prototypes
Number of unique prototypes to generate.
Definition PlantArchitecture.h:378
+
LeafPrototype::build_petiolule
bool build_petiolule
Add a petiolule to the base of the leaflet.
Definition PlantArchitecture.h:381
+
LeafPrototype::wave_period
RandomParameter_float wave_period
Period factor of leaf waves (sets how many waves there are along the leaf length)
Definition PlantArchitecture.h:361
+
LeafPrototype::leaf_offset
helios::vec3 leaf_offset
Amount to shift the leaf.
Definition PlantArchitecture.h:372
+
LeafPrototype::leaf_buckle_angle
RandomParameter_float leaf_buckle_angle
Angle of the leaf buckle (degrees)
Definition PlantArchitecture.h:369
+
LeafPrototype::leaf_buckle_length
RandomParameter_float leaf_buckle_length
Fraction of the leaf length where the leaf buckles under its weight.
Definition PlantArchitecture.h:367
+
LeafPrototype::midrib_fold_fraction
RandomParameter_float midrib_fold_fraction
Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded ...
Definition PlantArchitecture.h:348
+
LeafPrototype::prototype_function
uint(* prototype_function)(helios::Context *, LeafPrototype *prototype_parameters, int compound_leaf_index)
Custom prototype function for creating leaf prototypes.
Definition PlantArchitecture.h:330
+
LeafPrototype::wave_amplitude
RandomParameter_float wave_amplitude
Amplitude of leaf waves (sets the height of leaf waves)
Definition PlantArchitecture.h:363
+
LeafPrototype::OBJ_model_file
std::string OBJ_model_file
OBJ model file to load for the leaf.
Definition PlantArchitecture.h:336
+
LeafPrototype::longitudinal_curvature
RandomParameter_float longitudinal_curvature
Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward,...
Definition PlantArchitecture.h:352
+ +
Phytomer::setInternodeMaxLength
void setInternodeMaxLength(float internode_length_max_new)
Set the fully-elongated (maximum) internode length.
Definition PlantArchitecture.cpp:1597
+
Phytomer::petiole_vertices
std::vector< std::vector< helios::vec3 > > petiole_vertices
Coordinates of internode tube segments. Index is tube segment within internode.
Definition PlantArchitecture.h:896
+
Phytomer::setInternodeMaxRadius
void setInternodeMaxRadius(float internode_radius_max_new)
Set the maximum radius of the internode.
Definition PlantArchitecture.cpp:1602
+
Phytomer::shoot_index
helios::int3 shoot_index
.x = index of phytomer along shoot, .y = current number of phytomers on parent shoot,...
Definition PlantArchitecture.h:917
+
Phytomer::setLeafScaleFraction
void setLeafScaleFraction(float leaf_scale_factor_fraction)
Set the leaf scale as a fraction of its total fully-elongated scale factor. Value is uniformly applie...
Definition PlantArchitecture.cpp:1606
+
Phytomer::age
float age
Time since the phytomer was created.
Definition PlantArchitecture.h:924
+
Phytomer::setLeafPrototypeScale
void setLeafPrototypeScale(float leaf_prototype_scale)
Set the fully-elongated (maximum) leaf prototype scale. Value is uniformly applied for all leaves/lea...
Definition PlantArchitecture.cpp:1670
+
Phytomer::scaleInternodeMaxLength
void scaleInternodeMaxLength(float scale_factor)
Scale the fully-elongated (maximum) internode length as a fraction of its current fully-elongated len...
Definition PlantArchitecture.cpp:1586
+ +
PhytomerParameters::PhytomerParameters
PhytomerParameters()
Default constructor - does not set random number generator.
Definition PlantArchitecture.cpp:115
+
PhytomerParameters::phytomer_callback_function
void(* phytomer_callback_function)(std::shared_ptr< Phytomer > phytomer_ptr)
Definition PlantArchitecture.h:646
+
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition PlantArchitecture.h:640
+ +
RandomParameter_float
Definition PlantArchitecture.h:27
+
RandomParameter_float::RandomParameter_float
RandomParameter_float()
Constructor initializing to a constant default value of 0.
Definition PlantArchitecture.h:34
+
RandomParameter_float::RandomParameter_float
RandomParameter_float(std::minstd_rand0 *rand_generator)
Constructor initializing the random number generator.
Definition PlantArchitecture.h:56
+
RandomParameter_float::RandomParameter_float
RandomParameter_float(float val)
Constructor initializing to a constant value.
Definition PlantArchitecture.h:45
+
RandomParameter_int
Definition PlantArchitecture.h:143
+ +
Shoot::updateShootNodes
void updateShootNodes(bool update_context_geometry=true)
Recalculate and apply the shoot's origin position and shift all downstream shoots.
Definition PlantArchitecture.cpp:675
+
Shoot::appendPhytomer
int appendPhytomer(float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters)
Append a phytomer at the shoot apex.
Definition PlantArchitecture.cpp:427
+
Shoot::sampleVegetativeBudBreak
bool sampleVegetativeBudBreak(uint node_index) const
Randomly sample whether a vegetative bud should break into a new shoot.
Definition PlantArchitecture.cpp:1832
+
Shoot::sampleChildShootType
std::string sampleChildShootType() const
Randomly sample the type of a child shoot based on the probabilities defined in the shoot parameters.
Definition PlantArchitecture.cpp:1797
+
Shoot::sampleEpicormicShoot
uint sampleEpicormicShoot(float dt, std::vector< float > &epicormic_positions_fraction)
Randomly sample whether the shoot should produce an epicormic shoot (water sprout) over timestep.
Definition PlantArchitecture.cpp:1861
+ +
ShootParameters::ShootParameters
ShootParameters()
Default constructor - does not set random number generator.
Definition PlantArchitecture.cpp:169
+
ShootParameters::vegetative_bud_break_probability_decay_rate
RandomParameter_float vegetative_bud_break_probability_decay_rate
Definition PlantArchitecture.h:709
+ +
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_plant_architecture_doc.html b/doc/html/_plant_architecture_doc.html index 55c10427c..63cd5d3cd 100644 --- a/doc/html/_plant_architecture_doc.html +++ b/doc/html/_plant_architecture_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Plant Architecture Model Plugin Documentation
+
Plant Architecture Model Plugin Documentation

Table of Contents

-
@@ -200,7 +300,7 @@

PlantArchitecture plantarchitecture(&context);
plantarchitecture.optionalOutputData("plantID"); //insert appropriate label from the table above
- +

Plug-in Overview

This plug-in provides a generalized framework for creating dynamic procedural plant models for a very wide range of species. The plug-in comes with a library of a number of different plant models, which have a common set of parameters that can be adjusted by the user. Parameters defining the plant can be set to constant values, or randomized based on a number of different distributions. The plant model can be grown over time, and will transition through different phenological stages such as dormancy, flowering, fruit set, and senescence. Users can also create their own plant models by changing model parameters, or build custom plants branch-by-branch.

@@ -274,7 +374,7 @@

return 0;
}
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882

This will create a default bean plant that is 45 days old (i.e., 45 days since emergence).

Multiple plants can be created manually by calling the PlantArchitecture::buildPlantInstanceFromLibrary() method multiple times with different base positions. There is also a method available to build a canopy of regularly-spaced plants: PlantArchitecture::buildPlantCanopyFromLibrary().

#include "PlantArchitecture.h"
@@ -296,9 +396,9 @@

return 0;
}
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503

Growing the Model over Time

The model can be grown over time by calling the PlantArchitecture::advanceTime() method after the plant instance has been created, where the argument to this method is the timestep to advance in days. The timestep value can be larger than the phyllochron, such that multiple phytomers and shoots can be produced in a single call to PlantArchitecture::advanceTime().

@@ -424,14 +524,14 @@

param = 5;
// Alternative approach
RandomParameter_float other_param(5);
-
RandomParameter_float
Definition: PlantArchitecture.h:27
+
RandomParameter_float
Definition PlantArchitecture.h:27

In order to randomize the variable, member methods can be called to set the distribution type and specify the distribution parameters. It is also required to initialize the variable with a random number generator. It is recommended that this be based on the Context's generator to keep everything consistent. Below is an example.

Context context;
RandomParameter_float param(context.getRandomGenerator());
param.uniformDistribution(0,7.5);
std::cout << "Random value: " << param.val() << std::endl;
-
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition: Context.cpp:49
+
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition Context.cpp:49

Available distributions for RandomParameter_float are listed below

@@ -455,7 +555,7 @@

Defining the Phytomer and its Parameters

Phytomers are defined by a set of parameters that specify its geometry. These parameters are stored in a data structure called PhytomerParameters. The phytomer parameters are parameters that are generally constant across space and time (aside from randomization), and are usually species-specific.

-

The table below lists the parameters that define the geometry of the phytomer, and their descriptions. There are some parameters that are notably absent, such as the internode length and radius. Since these parameters vary substantially with age and position along the shoot, these are considered to be parameters of the shoot and not the phytomer. Shoot parameters are described below in Defining Shoots and their Parameters.

+

The table below lists the parameters that define the geometry of the phytomer, and their descriptions. There are some parameters that are notably absent, such as the internode length and radius. Since these parameters vary substantially with age and position along the shoot, these are considered to be parameters of the shoot and not the phytomer. Shoot parameters are described below in Defining Shoots and their Parameters.

@@ -464,9 +564,96 @@

- + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Parameter Type Units Description
pitch RandomParameter_float degrees Angle of the phytomer internode with respect to the previous phytomer along the shoot. Setting this >0 creates a zig-zag shoot.
phyllotactic_angle RandomParameter_float degrees Angle between the petioles/buds of two successive phytomers along the shoot. See this page for more information on phyllotaxis.
phyllotactic_angle RandomParameter_float degrees Angle between the petioles/buds of two successive phytomers along the shoot. See this page for more information on phyllotaxis.
radius_initial RandomParameter_float meters Initial radius of the internode when it is created.
max_vegetative_buds_per_petiole RandomParameter_int - Maximum number of possible vegetative nodes per petiole. Some of these buds may not break depending on the vegetative bud break probability.
max_floral_buds_per_petiole RandomParameter_int - Maximum number of possible floral nodes per petiole. Some of these buds may not break depending on the flower bud break probability.
color helios::RGBcolor - Diffuse color of the internode tube.
length_segments uint - Number of longitudinal segment subdivisions of the internode tube.
radial_subdivisions uint - Number of radial subdivisions segments of the internode tube (e.g., =4 gives a square cross-section; =5 gives a pentagonal cross-section, etc.)
— petiole —
petioles_per_internode uint - Number of petioles emanating from a single internode (e.g., for an 'opposite' growth pattern, = 2)
pitch RandomParameter_float degrees Angle of the petiole base axis with respect to its parent phytomer axis.
radius RandomParameter_float meters Radius of petiole cross-section. (radius = 0 does not create any petiole)
length RandomParameter_float meters Length of the petiole tube. (length = 0 does not create any petiole)
curvature RandomParameter_float degrees/meter Curvature angle of the petiole per unit length of petiole. If curvature is positive, petiole curves upward toward vertical. If negative, curvature is downward.
taper RandomParameter_float - Ratio between the petiole radius at the tip to the radius at the base (e.g., =1 has no taper, =0 comes to a point at the tip).
color helios::RGBcolor - Diffuse color of the petiole tube.
length_segments uint - Number of longitudinal segment subdivisions of the petiole tube.
radial_subdivisions uint - Number of radial subdivisions segments of the petiole tube (e.g., =4 gives a square cross-section; =5 gives a pentagonal cross-section, etc.)
— leaf —
leaves_per_petiole uint - Number of leaves on each petiole. >1 creates a compound leaf.
pitch RandomParameter_float degrees Angle of the leaf axis with respect to its parent petiole axis.
yaw RandomParameter_float degrees Rotation angle of the leaf about its base along the plane of its lamina.
roll RandomParameter_float degrees Rotation angle of the leaf about it's own axis (midrib).
leaflet_offset RandomParameter_float - If a compound leaf (leaves_per_petiole>1), this sets the spacing between adjacent leaflets along the petiole as a fraction of the petiole length. Note that the first two leaves from the tip will be offset from the tip by half this value.
leaflet_scale RandomParameter_float - If a compound leaf (leaves_per_petiole>1), this sets the scaling factor of the leaflet moving down the petiole with respect to the previous leaf (<1 scales down, >1 scales up).
prototype_scale RandomParameter_float - Scaling factor applied to the leaf prototype. Usually the prototype has unit length, so this sets the physical length of the leaf.
prototype LeafPrototype struct - Structure containing information to build leaf prototypes.
— peduncle —
length RandomParameter_float meters Length of the peduncle (inflorescence supporting structure).
radius RandomParameter_float meters Radius of the peduncle.
pitch RandomParameter_float degrees Angle of the peduncle axis with respect to its parent internode axis.
roll RandomParameter_float degrees Rotation angle of the peduncle about it's own axis.
curvature RandomParameter_float degrees/meter Curvature angle of the peduncle per unit length of peduncle. If curvature is positive, peduncle curves upward toward vertical. If negative, curvature is downward.
color helios::RGBcolor - Diffuse color of the peduncle tube.
length_segments uint - Number of longitudinal segment subdivisions of the inflorescence supporting structure.
radial_subdivisions uint - Number of radial subdivisions segments of the inflorescence supporting structure (e.g., =4 gives a square cross-section; =5 gives a pentagonal cross-section, etc.)
— inflorescence —
flowers_per_peduncle RandomParameter_int - Number of flowers per peduncle (rachis).
flower_offset RandomParameter_float - If peduncle has multiple flowers/fruit (flowers_per_peduncle>1), this sets the spacing between adjacent flowers/fruit along the peduncle as a fraction of the peduncle length.
pitch RandomParameter_float degrees Angle of the fruit axis with respect to its parent peduncle axis.
roll RandomParameter_float degrees Rotation angle of the fruit about it's own axis (x-axis of fruit prototype).
flower_prototype_scale RandomParameter_float - Scaling factor applied to the flower prototype. Usually the prototype has unit length, so this sets the physical length of the flower.
flower_prototype_function function pointer - Pointer to a function that generates the flower prototype model. Function takes arguments ( helios::Context*, uint subdivisions, bool flower_is_open ) and returns an object ID (uint).
fruit_prototype_scale RandomParameter_float - Scaling factor applied to the fruit prototype. Usually the prototype has unit length, so this sets the physical length of the fruit.
fruit_prototype_function function pointer - Pointer to a function that generates the fruit prototype model. Function takes arguments ( helios::Context*, uint subdivisions, float time_since_fruit_set ) and returns an object ID (uint).
unique_prototypes uint - Number of unique flower/fruit prototypes to generate per shoot type. If = 0, every leaf will be unique. Increasing this value gives more variability across the plant, but it will take longer to initially generate the plant model.
-

| radius_initial | RandomParameter_float | 0.001 | meters | Initial radius of the internode when it is created. | | max_vegetative_buds_per_petiole | RandomParameter_int | - | Maximum number of possible vegetative nodes per petiole. Some of these buds may not break depending on the vegetative bud break probability. | | max_floral_buds_per_petiole | RandomParameter_int | - | Maximum number of possible floral nodes per petiole. Some of these buds may not break depending on the flower bud break probability. | | color | helios::RGBcolor | - | Diffuse color of the internode tube. | | length_segments | uint | - | Number of longitudinal segment subdivisions of the internode tube. | | radial_subdivisions | uint | - | Number of radial subdivisions segments of the internode tube (e.g., =4 gives a square cross-section; =5 gives a pentagonal cross-section, etc.) | | — petiole — |||| | petioles_per_internode | uint | - | Number of petioles emanating from a single internode (e.g., for an 'opposite' growth pattern, = 2) | | pitch | RandomParameter_float | degrees | Angle of the petiole base axis with respect to its parent phytomer axis. | | radius | RandomParameter_float | meters | Radius of petiole cross-section. (radius = 0 does not create any petiole) | | length | RandomParameter_float | meters | Length of the petiole tube. (length = 0 does not create any petiole) | | curvature | RandomParameter_float | degrees/meter | Curvature angle of the petiole per unit length of petiole. If curvature is positive, petiole curves upward toward vertical. If negative, curvature is downward. | | taper | RandomParameter_float | - | Ratio between the petiole radius at the tip to the radius at the base (e.g., =1 has no taper, =0 comes to a point at the tip). | | color | helios::RGBcolor | - | Diffuse color of the petiole tube. | | length_segments | uint | - | Number of longitudinal segment subdivisions of the petiole tube. | | radial_subdivisions | uint | - | Number of radial subdivisions segments of the petiole tube (e.g., =4 gives a square cross-section; =5 gives a pentagonal cross-section, etc.) | | — leaf — |||| | leaves_per_petiole | uint | - | Number of leaves on each petiole. >1 creates a compound leaf. | | pitch | RandomParameter_float | degrees | Angle of the leaf axis with respect to its parent petiole axis. | | yaw | RandomParameter_float | degrees | Rotation angle of the leaf about its base along the plane of its lamina. | | roll | RandomParameter_float | degrees | Rotation angle of the leaf about it's own axis (midrib). | | leaflet_offset | RandomParameter_float | - | If a compound leaf (leaves_per_petiole>1), this sets the spacing between adjacent leaflets along the petiole as a fraction of the petiole length. Note that the first two leaves from the tip will be offset from the tip by half this value. | | leaflet_scale | RandomParameter_float | - | If a compound leaf (leaves_per_petiole>1), this sets the scaling factor of the leaflet moving down the petiole with respect to the previous leaf (<1 scales down, >1 scales up). | | prototype_scale | RandomParameter_float | - | Scaling factor applied to the leaf prototype. Usually the prototype has unit length, so this sets the physical length of the leaf. | | prototype | LeafPrototype struct | - | Structure containing information to build leaf prototypes. | | — peduncle — |||| | length | RandomParameter_float | meters | Length of the peduncle (inflorescence supporting structure). | | radius | RandomParameter_float | meters | Radius of the peduncle. | | pitch | RandomParameter_float | degrees | Angle of the peduncle axis with respect to its parent internode axis. | | roll | RandomParameter_float | degrees | Rotation angle of the peduncle about it's own axis. | | curvature | RandomParameter_float | degrees/meter | Curvature angle of the peduncle per unit length of peduncle. If curvature is positive, peduncle curves upward toward vertical. If negative, curvature is downward. | | color | helios::RGBcolor | - | Diffuse color of the peduncle tube. | | length_segments | uint | - | Number of longitudinal segment subdivisions of the inflorescence supporting structure. | | radial_subdivisions | uint | - | Number of radial subdivisions segments of the inflorescence supporting structure (e.g., =4 gives a square cross-section; =5 gives a pentagonal cross-section, etc.) | | — inflorescence — |||| | flowers_per_peduncle | RandomParameter_int | - | Number of flowers per peduncle (rachis). | | flower_offset | RandomParameter_float | - | If peduncle has multiple flowers/fruit (flowers_per_peduncle>1), this sets the spacing between adjacent flowers/fruit along the peduncle as a fraction of the peduncle length. | | pitch | RandomParameter_float | degrees | Angle of the fruit axis with respect to its parent peduncle axis. | | roll | RandomParameter_float | degrees | Rotation angle of the fruit about it's own axis (x-axis of fruit prototype). | | flower_prototype_scale | RandomParameter_float | - | Scaling factor applied to the flower prototype. Usually the prototype has unit length, so this sets the physical length of the flower. | | flower_prototype_function | function pointer | - | Pointer to a function that generates the flower prototype model. Function takes arguments ( helios::Context*, uint subdivisions, bool flower_is_open ) and returns an object ID (uint). | | fruit_prototype_scale | RandomParameter_float | - | Scaling factor applied to the fruit prototype. Usually the prototype has unit length, so this sets the physical length of the fruit. | | fruit_prototype_function | function pointer | - | Pointer to a function that generates the fruit prototype model. Function takes arguments ( helios::Context*, uint subdivisions, float time_since_fruit_set ) and returns an object ID (uint). | | unique_prototypes | uint | - | Number of unique flower/fruit prototypes to generate per shoot type. If = 0, every leaf will be unique. Increasing this value gives more variability across the plant, but it will take longer to initially generate the plant model. |

The phytomer parameters are stored in a data structure (struct) called PhytomerParameters. This structure has sub-member structs for each of internode, leaf, petiole, and inflorescence, each containing the parameters for that element type as designated in the table above. Below is an example of how to set a few of the parameters:

PhytomerParameters phytomer;
phytomer.internode.pitch = 20;
@@ -475,7 +662,7 @@

phytomer.leaf.pitch = 10;
phytomer.leaf.prototype_scale = 0.1;
phytomer.peduncle.length = 0.1;
- +

The figure below provides some examples of how various shoot growth patterns (e.g., alternate, opposite) can be created by varying the model parameters.

@@ -696,7 +883,7 @@

plantarchitecture.updateCurrentShootParameters( "trunk", shoot_parameters );
plantarchitecture.buildPlantInstanceFromLibrary( nullorigin, 0 );
- +

Below is an example of modifying the parameters for all shoot types:

plantarchitecture.loadPlantModelFromLibrary( "almond" );
@@ -779,13 +966,14 @@

The UUIDs for a given sub-organ group can be retrieved by calling the Context method helios::Context::filterPrimitivesByData(). Below is an example for getting the leaf vein UUIDs.

std::vector<uint> plant_UUIDs = plantarchitecture.getAllPlantUUIDs( plantID );
std::vector<uint> leaf_vein_UUIDs = context.filterPrimitivesByData( plant_UUIDs, "object_label", "veins" );
-
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition: Context_data.cpp:2299
+
helios::Context::filterPrimitivesByData
std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
Filter a set of primitives based on their primitive data and a condition and float value.
Definition Context_data.cpp:2299

For custom user-defined organ prototypes, users should follow the convention of grouping the above sub-components into separate object groups with the labels given in the table above.

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_plant_library_8cpp.html b/doc/html/_plant_library_8cpp.html index 326415d9a..c631ef452 100644 --- a/doc/html/_plant_library_8cpp.html +++ b/doc/html/_plant_library_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
PlantLibrary.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_plant_library_8cpp_source.html b/doc/html/_plant_library_8cpp_source.html index 0177e9fb4..3c0c440e2 100644 --- a/doc/html/_plant_library_8cpp_source.html +++ b/doc/html/_plant_library_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
PlantLibrary.cpp
@@ -97,13 +109,16 @@
17
18using namespace helios;
19
+
20void PlantArchitecture::loadPlantModelFromLibrary( const std::string &plant_label ){
21
22 current_plant_model = plant_label;
23 initializeDefaultShoots(plant_label);
24
25}
+
26
+
27uint PlantArchitecture::buildPlantInstanceFromLibrary( const helios::vec3 &base_position, float age ){
28
29 if( current_plant_model.empty() ){
@@ -166,7 +181,9 @@
86 return plantID;
87
88}
+
89
+
90ShootParameters PlantArchitecture::getCurrentShootParameters( const std::string &shoot_type_label ){
91
92 if( shoot_types.find(shoot_type_label) == shoot_types.end() ){
@@ -175,14 +192,18 @@
95
96 return shoot_types.at(shoot_type_label);
97}
+
98
+
99std::map<std::string, ShootParameters> PlantArchitecture::getCurrentShootParameters(){
100 if( shoot_types.empty() ){
101 std::cerr << "WARNING (PlantArchitecture::getCurrentShootParameters): No plant models have been loaded. You need to first load a plant model from the library (see loadPlantModelFromLibrary()) or manually add shoot parameters (see updateCurrentShootParameters())." << std::endl;
102 }
103 return shoot_types;
104}
+
105
+
106std::map<std::string, PhytomerParameters> PlantArchitecture::getCurrentPhytomerParameters( ){
107 if( shoot_types.empty() ){
108 std::cerr << "WARNING (PlantArchitecture::getCurrentPhytomerParameters): No plant models have been loaded. You need to first load a plant model from the library (see loadPlantModelFromLibrary()) or manually add shoot parameters (see updateCurrentShootParameters())." << std::endl;
@@ -193,14 +214,19 @@
113 }
114 return phytomer_parameters;
115}
+
116
+
117void PlantArchitecture::updateCurrentShootParameters( const std::string &shoot_type_label, const ShootParameters &params ){
118 shoot_types[shoot_type_label] = params;
119}
+
120
+
121void PlantArchitecture::updateCurrentShootParameters( const std::map<std::string, ShootParameters> &params ){
122 shoot_types = params;
123}
+
124
125void PlantArchitecture::initializeDefaultShoots( const std::string &plant_label ){
126
@@ -1804,1240 +1830,1240 @@
1724 ShootParameters shoot_parameters_base = shoot_parameters_primary;
1725 shoot_parameters_base.phytomer_parameters = phytomer_parameters_puncturevine;
1726 shoot_parameters_base.phytomer_parameters.internode.phyllotactic_angle.uniformDistribution(137.5-10,137.5+10);
-
1727 shoot_parameters_base.phytomer_parameters.petiole.petioles_per_internode = 0;
-
1728 shoot_parameters_base.phytomer_parameters.internode.pitch = 0;
-
1729 shoot_parameters_base.phytomer_parameters.petiole.pitch = 0;
-
1730 shoot_parameters_base.vegetative_bud_break_probability_min = 1;
-
1731 shoot_parameters_base.vegetative_bud_break_time = 2;
-
1732 shoot_parameters_base.phyllochron_min = 2;
-
1733 shoot_parameters_base.elongation_rate = 0.15;
-
1734 shoot_parameters_base.gravitropic_curvature = 0;
-
1735 shoot_parameters_base.internode_length_max = 0.01;
-
1736 shoot_parameters_base.internode_length_decay_rate = 0;
-
1737 shoot_parameters_base.insertion_angle_tip = 90;
-
1738 shoot_parameters_base.insertion_angle_decay_rate = 0;
-
1739 shoot_parameters_base.flowers_require_dormancy = false;
-
1740 shoot_parameters_base.growth_requires_dormancy = false;
-
1741 shoot_parameters_base.flower_bud_break_probability = 0.0;
-
1742 shoot_parameters_base.max_nodes.uniformDistribution(3,5);
-
1743 shoot_parameters_base.defineChildShootTypes({"primary_puncturevine"},{1.f});
-
1744
-
1745 ShootParameters shoot_parameters_children = shoot_parameters_primary;
-
1746 shoot_parameters_children.base_roll = 0;
-
1747
-
1748 defineShootType("base_puncturevine", shoot_parameters_base);
-
1749 defineShootType("primary_puncturevine", shoot_parameters_primary);
-
1750 defineShootType("secondary_puncturevine", shoot_parameters_children);
-
1751
-
1752}
-
1753
-
1754uint PlantArchitecture::buildPuncturevinePlant(const helios::vec3 &base_position) {
-
1755
-
1756 if (shoot_types.empty()) {
-
1757 //automatically initialize puncturevine plant shoots
-
1758 initializePuncturevineShoots();
-
1759 }
-
1760
-
1761 uint plantID = addPlantInstance(base_position, 0);
-
1762
-
1763 uint uID_stem = addBaseStemShoot(plantID, 3, make_AxisRotation(0, 0.f, 0.f), 0.001, 0.001, 1, 1, 0, "base_puncturevine");
-
1764
-
1765 breakPlantDormancy(plantID);
-
1766
-
1767 plant_instances.at(plantID).max_age = 45;
-
1768
-
1769 setPlantPhenologicalThresholds(plantID, 0, -1, 14, -1, -1, 1000, false);
-
1770
-
1771 return plantID;
-
1772
-
1773}
-
1774
-
1775void PlantArchitecture::initializeEasternRedbudShoots() {
-
1776
-
1777 // ---- Leaf Prototype ---- //
-
1778
-
1779 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
1780 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/RedbudLeaf.png";
-
1781 leaf_prototype.leaf_aspect_ratio = 1.f;
-
1782 leaf_prototype.midrib_fold_fraction = 0.2f;
-
1783 leaf_prototype.longitudinal_curvature = -0.15f;
-
1784 leaf_prototype.lateral_curvature = -0.1f;
-
1785 leaf_prototype.wave_period = 0.3f;
-
1786 leaf_prototype.wave_amplitude = 0.025f;
-
1787 leaf_prototype.subdivisions = 5;
-
1788 leaf_prototype.unique_prototypes = 5;
-
1789 leaf_prototype.leaf_offset = make_vec3(-0.3, 0, 0);
-
1790
-
1791 // ---- Phytomer Parameters ---- //
-
1792
-
1793 PhytomerParameters phytomer_parameters_redbud(context_ptr->getRandomGenerator());
-
1794
-
1795 phytomer_parameters_redbud.internode.pitch = 15;
-
1796 phytomer_parameters_redbud.internode.phyllotactic_angle.uniformDistribution(170,190);
-
1797 phytomer_parameters_redbud.internode.radius_initial = 0.0015;
-
1798 phytomer_parameters_redbud.internode.image_texture = "plugins/plantarchitecture/assets/textures/WesternRedbudBark.jpg";
-
1799 phytomer_parameters_redbud.internode.color.scale(0.3);
-
1800 phytomer_parameters_redbud.internode.length_segments = 1;
-
1801 phytomer_parameters_redbud.internode.max_floral_buds_per_petiole = 5;
-
1802
-
1803 phytomer_parameters_redbud.petiole.petioles_per_internode = 1;
-
1804 phytomer_parameters_redbud.petiole.color = make_RGBcolor(0.65, 0.52, 0.39);
-
1805 phytomer_parameters_redbud.petiole.pitch.uniformDistribution(20, 40);
-
1806 phytomer_parameters_redbud.petiole.radius = 0.002;
-
1807 phytomer_parameters_redbud.petiole.length = 0.075;
-
1808 phytomer_parameters_redbud.petiole.taper = 0;
-
1809 phytomer_parameters_redbud.petiole.curvature = 0;
-
1810 phytomer_parameters_redbud.petiole.length_segments = 1;
-
1811
-
1812 phytomer_parameters_redbud.leaf.leaves_per_petiole = 1;
-
1813 phytomer_parameters_redbud.leaf.pitch.uniformDistribution(-110, -80);
-
1814 phytomer_parameters_redbud.leaf.yaw = 0;
-
1815 phytomer_parameters_redbud.leaf.roll.uniformDistribution(-5, 5);
-
1816 phytomer_parameters_redbud.leaf.prototype_scale = 0.1;
-
1817 phytomer_parameters_redbud.leaf.prototype = leaf_prototype;
-
1818
-
1819 phytomer_parameters_redbud.peduncle.length = 0.02;
-
1820 phytomer_parameters_redbud.peduncle.pitch.uniformDistribution(50,90);
-
1821 phytomer_parameters_redbud.peduncle.color = make_RGBcolor(0.32, 0.05, 0.13);
-
1822
-
1823 phytomer_parameters_redbud.inflorescence.flowers_per_peduncle = 1;
-
1824 phytomer_parameters_redbud.inflorescence.pitch = 0;
-
1825 phytomer_parameters_redbud.inflorescence.flower_prototype_function = RedbudFlowerPrototype;
-
1826 phytomer_parameters_redbud.inflorescence.flower_prototype_scale = 0.04;
-
1827 phytomer_parameters_redbud.inflorescence.fruit_prototype_function = RedbudFruitPrototype;
-
1828 phytomer_parameters_redbud.inflorescence.fruit_prototype_scale = 0.1;
-
1829 phytomer_parameters_redbud.inflorescence.fruit_gravity_factor_fraction = 0.7;
-
1830
-
1831 phytomer_parameters_redbud.phytomer_creation_function = RedbudPhytomerCreationFunction;
-
1832 phytomer_parameters_redbud.phytomer_callback_function = RedbudPhytomerCallbackFunction;
-
1833
-
1834 // ---- Shoot Parameters ---- //
-
1835
-
1836 ShootParameters shoot_parameters_main(context_ptr->getRandomGenerator());
-
1837 shoot_parameters_main.phytomer_parameters = phytomer_parameters_redbud;
-
1838 shoot_parameters_main.vegetative_bud_break_probability_min = 1.0;
-
1839 shoot_parameters_main.vegetative_bud_break_time = 2;
-
1840 shoot_parameters_main.phyllochron_min = 2;
-
1841 shoot_parameters_main.elongation_rate = 0.1;
-
1842 shoot_parameters_main.girth_area_factor = 4.f;
-
1843 shoot_parameters_main.gravitropic_curvature = 300;
-
1844 shoot_parameters_main.tortuosity = 5;
-
1845 shoot_parameters_main.internode_length_max = 0.04;
-
1846 shoot_parameters_main.internode_length_decay_rate = 0.005;
-
1847 shoot_parameters_main.internode_length_min = 0.01;
-
1848 shoot_parameters_main.insertion_angle_tip = 75;
-
1849 shoot_parameters_main.insertion_angle_decay_rate = 10;
-
1850 shoot_parameters_main.flowers_require_dormancy = true;
-
1851 shoot_parameters_main.growth_requires_dormancy = true;
-
1852 shoot_parameters_main.determinate_shoot_growth = false;
-
1853 shoot_parameters_main.max_terminal_floral_buds = 0;
-
1854 shoot_parameters_main.flower_bud_break_probability = 0.8;
-
1855 shoot_parameters_main.fruit_set_probability = 0.3;
-
1856 shoot_parameters_main.max_nodes = 25;
-
1857 shoot_parameters_main.max_nodes_per_season = 10;
-
1858 shoot_parameters_main.base_roll = 90;
-
1859
-
1860 ShootParameters shoot_parameters_trunk = shoot_parameters_main;
-
1861 shoot_parameters_trunk.phytomer_parameters.internode.pitch = 0;
-
1862 shoot_parameters_trunk.phytomer_parameters.internode.radial_subdivisions = 15;
-
1863 shoot_parameters_trunk.phytomer_parameters.internode.max_floral_buds_per_petiole = 0;
-
1864 shoot_parameters_trunk.insertion_angle_tip = 60;
-
1865 shoot_parameters_trunk.max_nodes = 75;
-
1866 shoot_parameters_trunk.max_nodes_per_season = 10;
-
1867 shoot_parameters_trunk.tortuosity = 1.5;
-
1868 shoot_parameters_trunk.defineChildShootTypes({"eastern_redbud_shoot"},{1.f});
-
1869
-
1870 defineShootType("eastern_redbud_trunk", shoot_parameters_trunk);
-
1871 defineShootType("eastern_redbud_shoot", shoot_parameters_main);
-
1872
-
1873}
-
1874
-
1875uint PlantArchitecture::buildEasternRedbudPlant(const helios::vec3 &base_position) {
-
1876
-
1877 if (shoot_types.empty()) {
-
1878 //automatically initialize redbud plant shoots
-
1879 initializeEasternRedbudShoots();
-
1880 }
-
1881
-
1882 uint plantID = addPlantInstance(base_position, 0);
-
1883
-
1884 uint uID_stem = addBaseStemShoot(plantID, 16, make_AxisRotation(context_ptr->randu(0,0.1*M_PI), context_ptr->randu(0,2*M_PI), context_ptr->randu(0,2*M_PI)), 0.0075, 0.05, 1, 1, 0.4, "eastern_redbud_trunk");
-
1885
-
1886 makePlantDormant(plantID);
-
1887 breakPlantDormancy(plantID);
-
1888
-
1889 //leave four vegetative buds on the trunk and remove the rest
-
1890 for (auto &phytomer: this->plant_instances.at(plantID).shoot_tree.at(uID_stem)->phytomers ) {
-
1891 if ( phytomer->shoot_index.x < 12 ) {
-
1892 for (auto &petiole: phytomer->axillary_vegetative_buds) {
-
1893 for (auto &vbud: petiole) {
-
1894 phytomer->setVegetativeBudState(BUD_DEAD, vbud);
-
1895 }
-
1896 }
-
1897 }
-
1898 }
-
1899
-
1900 setPlantPhenologicalThresholds(plantID, 165, -1, 3, 7, 30, 200, false);
-
1901
-
1902 plant_instances.at(plantID).max_age = 1460;
-
1903
-
1904 return plantID;
-
1905
-
1906}
-
1907
-
1908void PlantArchitecture::initializeRiceShoots() {
-
1909
-
1910 // ---- Leaf Prototype ---- //
-
1911
-
1912 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
1913 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SorghumLeaf.png";
-
1914 leaf_prototype.leaf_aspect_ratio = 0.06f;
-
1915 leaf_prototype.midrib_fold_fraction = 0.3f;
-
1916 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.2, 0);
-
1917 leaf_prototype.lateral_curvature = -0.3;
-
1918 leaf_prototype.wave_period = 0.1f;
-
1919 leaf_prototype.wave_amplitude = 0.1f;
-
1920 leaf_prototype.subdivisions = 20;
-
1921 leaf_prototype.unique_prototypes = 10;
-
1922
-
1923 // ---- Phytomer Parameters ---- //
-
1924
-
1925 PhytomerParameters phytomer_parameters_rice(context_ptr->getRandomGenerator());
-
1926
-
1927 phytomer_parameters_rice.internode.pitch = 0;
-
1928 phytomer_parameters_rice.internode.phyllotactic_angle.uniformDistribution(67, 77);
-
1929 phytomer_parameters_rice.internode.radius_initial = 0.001;
-
1930 phytomer_parameters_rice.internode.color = make_RGBcolor(0.27, 0.31, 0.16);
-
1931 phytomer_parameters_rice.internode.length_segments = 1;
-
1932 phytomer_parameters_rice.internode.radial_subdivisions = 6;
-
1933 phytomer_parameters_rice.internode.max_floral_buds_per_petiole = 0;
-
1934 phytomer_parameters_rice.internode.max_vegetative_buds_per_petiole = 0;
-
1935
-
1936 phytomer_parameters_rice.petiole.petioles_per_internode = 1;
-
1937 phytomer_parameters_rice.petiole.pitch.uniformDistribution(-40, 0);
-
1938 phytomer_parameters_rice.petiole.radius = 0.0;
-
1939 phytomer_parameters_rice.petiole.length = 0.01;
-
1940 phytomer_parameters_rice.petiole.taper = 0;
-
1941 phytomer_parameters_rice.petiole.curvature = 0;
-
1942 phytomer_parameters_rice.petiole.length_segments = 1;
-
1943
-
1944 phytomer_parameters_rice.leaf.leaves_per_petiole = 1;
-
1945 phytomer_parameters_rice.leaf.pitch = 0;
-
1946 phytomer_parameters_rice.leaf.yaw = 0;
-
1947 phytomer_parameters_rice.leaf.roll = 0;
-
1948 phytomer_parameters_rice.leaf.prototype_scale = 0.15;
-
1949 phytomer_parameters_rice.leaf.prototype = leaf_prototype;
-
1950
-
1951 phytomer_parameters_rice.peduncle.pitch = 0;
-
1952 phytomer_parameters_rice.peduncle.length.uniformDistribution(0.14,0.18);
-
1953 phytomer_parameters_rice.peduncle.radius = 0.0005;
-
1954 phytomer_parameters_rice.peduncle.color = phytomer_parameters_rice.internode.color;
-
1955 phytomer_parameters_rice.peduncle.curvature.uniformDistribution(-800,-50);
-
1956 phytomer_parameters_rice.peduncle.radial_subdivisions = 6;
-
1957 phytomer_parameters_rice.peduncle.length_segments = 8;
-
1958
-
1959 phytomer_parameters_rice.inflorescence.flowers_per_peduncle = 60;
-
1960 phytomer_parameters_rice.inflorescence.pitch.uniformDistribution(20,25);
-
1961 phytomer_parameters_rice.inflorescence.roll = 0;
-
1962 phytomer_parameters_rice.inflorescence.fruit_prototype_scale = 0.008;
-
1963 phytomer_parameters_rice.inflorescence.flower_offset = 0.012;
-
1964 phytomer_parameters_rice.inflorescence.fruit_prototype_function = RiceSpikePrototype;
-
1965
-
1966// phytomer_parameters_rice.phytomer_creation_function = RicePhytomerCreationFunction;
-
1967
-
1968 // ---- Shoot Parameters ---- //
-
1969
-
1970 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
-
1971 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_rice;
-
1972 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
-
1973 shoot_parameters_mainstem.flower_bud_break_probability = 1;
-
1974 shoot_parameters_mainstem.phyllochron_min = 2;
-
1975 shoot_parameters_mainstem.elongation_rate = 0.1;
-
1976 shoot_parameters_mainstem.girth_area_factor = 5.f;
-
1977 shoot_parameters_mainstem.gravitropic_curvature.uniformDistribution(-1000,-400);
-
1978 shoot_parameters_mainstem.internode_length_max = 0.0075;
-
1979 shoot_parameters_mainstem.internode_length_decay_rate = 0;
-
1980 shoot_parameters_mainstem.flowers_require_dormancy = false;
-
1981 shoot_parameters_mainstem.growth_requires_dormancy = false;
-
1982 shoot_parameters_mainstem.determinate_shoot_growth = false;
-
1983 shoot_parameters_mainstem.fruit_set_probability = 1.0;
-
1984 shoot_parameters_mainstem.defineChildShootTypes({"mainstem"},{1.0});
-
1985 shoot_parameters_mainstem.max_nodes = 30;
-
1986 shoot_parameters_mainstem.max_terminal_floral_buds = 5;
-
1987
-
1988 defineShootType("mainstem",shoot_parameters_mainstem);
-
1989
-
1990}
-
1991
-
1992uint PlantArchitecture::buildRicePlant(const helios::vec3 &base_position) {
-
1993
-
1994 if (shoot_types.empty()) {
-
1995 //automatically initialize rice plant shoots
-
1996 initializeRiceShoots();
-
1997 }
-
1998
-
1999 uint plantID = addPlantInstance(base_position, 0);
-
2000
-
2001 uint uID_stem = addBaseStemShoot(plantID, 1, make_AxisRotation(context_ptr->randu(0.f, 0.1f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI)), 0.001, 0.0075, 0.01, 0.01, 0, "mainstem");
-
2002
-
2003 breakPlantDormancy(plantID);
-
2004
-
2005 setPlantPhenologicalThresholds(plantID, 0, -1, -1, 4, 10, 1000, false);
-
2006
-
2007 plant_instances.at(plantID).max_age = 365;
-
2008
-
2009 return plantID;
-
2010
-
2011}
-
2012
-
2013void PlantArchitecture::initializeButterLettuceShoots() {
-
2014
-
2015 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2016 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/RomaineLettuceLeaf.png";
-
2017 leaf_prototype.leaf_aspect_ratio = 0.85f;
-
2018 leaf_prototype.midrib_fold_fraction = 0.2f;
-
2019 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.2, 0.05);
-
2020 leaf_prototype.lateral_curvature = -0.4f;
-
2021 leaf_prototype.wave_period.uniformDistribution(0.15, 0.25);
-
2022 leaf_prototype.wave_amplitude.uniformDistribution(0.05,0.1);
-
2023 leaf_prototype.subdivisions = 30;
-
2024 leaf_prototype.unique_prototypes = 10;
-
2025
-
2026 // ---- Phytomer Parameters ---- //
-
2027
-
2028 PhytomerParameters phytomer_parameters(context_ptr->getRandomGenerator());
-
2029
-
2030 phytomer_parameters.internode.pitch = 0;
-
2031 phytomer_parameters.internode.phyllotactic_angle = 137.5;
-
2032 phytomer_parameters.internode.radius_initial = 0.02;
-
2033 phytomer_parameters.internode.color = make_RGBcolor(0.402,0.423,0.413);
-
2034 phytomer_parameters.internode.length_segments = 1;
-
2035 phytomer_parameters.internode.radial_subdivisions = 10;
-
2036
-
2037 phytomer_parameters.petiole.petioles_per_internode = 1;
-
2038 phytomer_parameters.petiole.pitch.uniformDistribution(0,30);
-
2039 phytomer_parameters.petiole.radius = 0.001;
-
2040 phytomer_parameters.petiole.length = 0.001;
-
2041 phytomer_parameters.petiole.length_segments = 1;
-
2042 phytomer_parameters.petiole.radial_subdivisions = 3;
-
2043 phytomer_parameters.petiole.color = RGB::red;
-
2044
-
2045 phytomer_parameters.leaf.leaves_per_petiole = 1;
-
2046 phytomer_parameters.leaf.pitch = 10;
-
2047 phytomer_parameters.leaf.yaw = 0;
-
2048 phytomer_parameters.leaf.roll = 0;
-
2049 phytomer_parameters.leaf.prototype_scale.uniformDistribution(0.15,0.25);
-
2050 phytomer_parameters.leaf.prototype = leaf_prototype;
-
2051
-
2052 phytomer_parameters.phytomer_creation_function = ButterLettucePhytomerCreationFunction;
-
2053
-
2054 // ---- Shoot Parameters ---- //
-
2055
-
2056 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
-
2057 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters;
-
2058 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
-
2059 shoot_parameters_mainstem.phyllochron_min = 2;
-
2060 shoot_parameters_mainstem.elongation_rate = 0.15;
-
2061 shoot_parameters_mainstem.girth_area_factor = 0.f;
-
2062 shoot_parameters_mainstem.gravitropic_curvature = 10;
-
2063 shoot_parameters_mainstem.internode_length_max = 0.001;
-
2064 shoot_parameters_mainstem.internode_length_decay_rate = 0;
-
2065 shoot_parameters_mainstem.flowers_require_dormancy = false;
-
2066 shoot_parameters_mainstem.growth_requires_dormancy = false;
-
2067 shoot_parameters_mainstem.flower_bud_break_probability = 0.0;
-
2068 shoot_parameters_mainstem.max_nodes = 25;
-
2069
-
2070 defineShootType("mainstem",shoot_parameters_mainstem);
+
1727 shoot_parameters_base.phytomer_parameters.internode.pitch = 0;
+
1728 shoot_parameters_base.phytomer_parameters.petiole.pitch = 0;
+
1729 shoot_parameters_base.vegetative_bud_break_probability_min = 1;
+
1730 shoot_parameters_base.vegetative_bud_break_time = 2;
+
1731 shoot_parameters_base.phyllochron_min = 2;
+
1732 shoot_parameters_base.elongation_rate = 0.15;
+
1733 shoot_parameters_base.gravitropic_curvature = 0;
+
1734 shoot_parameters_base.internode_length_max = 0.01;
+
1735 shoot_parameters_base.internode_length_decay_rate = 0;
+
1736 shoot_parameters_base.insertion_angle_tip = 90;
+
1737 shoot_parameters_base.insertion_angle_decay_rate = 0;
+
1738 shoot_parameters_base.flowers_require_dormancy = false;
+
1739 shoot_parameters_base.growth_requires_dormancy = false;
+
1740 shoot_parameters_base.flower_bud_break_probability = 0.0;
+
1741 shoot_parameters_base.max_nodes.uniformDistribution(3,5);
+
1742 shoot_parameters_base.defineChildShootTypes({"primary_puncturevine"},{1.f});
+
1743
+
1744 ShootParameters shoot_parameters_children = shoot_parameters_primary;
+
1745 shoot_parameters_children.base_roll = 0;
+
1746
+
1747 defineShootType("base_puncturevine", shoot_parameters_base);
+
1748 defineShootType("primary_puncturevine", shoot_parameters_primary);
+
1749 defineShootType("secondary_puncturevine", shoot_parameters_children);
+
1750
+
1751}
+
1752
+
1753uint PlantArchitecture::buildPuncturevinePlant(const helios::vec3 &base_position) {
+
1754
+
1755 if (shoot_types.empty()) {
+
1756 //automatically initialize puncturevine plant shoots
+
1757 initializePuncturevineShoots();
+
1758 }
+
1759
+
1760 uint plantID = addPlantInstance(base_position, 0);
+
1761
+
1762 uint uID_stem = addBaseStemShoot(plantID, 3, make_AxisRotation(0, 0.f, 0.f), 0.001, 0.001, 1, 1, 0, "base_puncturevine");
+
1763
+
1764 breakPlantDormancy(plantID);
+
1765
+
1766 plant_instances.at(plantID).max_age = 45;
+
1767
+
1768 setPlantPhenologicalThresholds(plantID, 0, -1, 14, -1, -1, 1000, false);
+
1769
+
1770 return plantID;
+
1771
+
1772}
+
1773
+
1774void PlantArchitecture::initializeEasternRedbudShoots() {
+
1775
+
1776 // ---- Leaf Prototype ---- //
+
1777
+
1778 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
1779 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/RedbudLeaf.png";
+
1780 leaf_prototype.leaf_aspect_ratio = 1.f;
+
1781 leaf_prototype.midrib_fold_fraction = 0.2f;
+
1782 leaf_prototype.longitudinal_curvature = -0.15f;
+
1783 leaf_prototype.lateral_curvature = -0.1f;
+
1784 leaf_prototype.wave_period = 0.3f;
+
1785 leaf_prototype.wave_amplitude = 0.025f;
+
1786 leaf_prototype.subdivisions = 5;
+
1787 leaf_prototype.unique_prototypes = 5;
+
1788 leaf_prototype.leaf_offset = make_vec3(-0.3, 0, 0);
+
1789
+
1790 // ---- Phytomer Parameters ---- //
+
1791
+
1792 PhytomerParameters phytomer_parameters_redbud(context_ptr->getRandomGenerator());
+
1793
+
1794 phytomer_parameters_redbud.internode.pitch = 15;
+
1795 phytomer_parameters_redbud.internode.phyllotactic_angle.uniformDistribution(170,190);
+
1796 phytomer_parameters_redbud.internode.radius_initial = 0.0015;
+
1797 phytomer_parameters_redbud.internode.image_texture = "plugins/plantarchitecture/assets/textures/WesternRedbudBark.jpg";
+
1798 phytomer_parameters_redbud.internode.color.scale(0.3);
+
1799 phytomer_parameters_redbud.internode.length_segments = 1;
+
1800 phytomer_parameters_redbud.internode.max_floral_buds_per_petiole = 5;
+
1801
+
1802 phytomer_parameters_redbud.petiole.petioles_per_internode = 1;
+
1803 phytomer_parameters_redbud.petiole.color = make_RGBcolor(0.65, 0.52, 0.39);
+
1804 phytomer_parameters_redbud.petiole.pitch.uniformDistribution(20, 40);
+
1805 phytomer_parameters_redbud.petiole.radius = 0.002;
+
1806 phytomer_parameters_redbud.petiole.length = 0.075;
+
1807 phytomer_parameters_redbud.petiole.taper = 0;
+
1808 phytomer_parameters_redbud.petiole.curvature = 0;
+
1809 phytomer_parameters_redbud.petiole.length_segments = 1;
+
1810
+
1811 phytomer_parameters_redbud.leaf.leaves_per_petiole = 1;
+
1812 phytomer_parameters_redbud.leaf.pitch.uniformDistribution(-110, -80);
+
1813 phytomer_parameters_redbud.leaf.yaw = 0;
+
1814 phytomer_parameters_redbud.leaf.roll.uniformDistribution(-5, 5);
+
1815 phytomer_parameters_redbud.leaf.prototype_scale = 0.1;
+
1816 phytomer_parameters_redbud.leaf.prototype = leaf_prototype;
+
1817
+
1818 phytomer_parameters_redbud.peduncle.length = 0.02;
+
1819 phytomer_parameters_redbud.peduncle.pitch.uniformDistribution(50,90);
+
1820 phytomer_parameters_redbud.peduncle.color = make_RGBcolor(0.32, 0.05, 0.13);
+
1821
+
1822 phytomer_parameters_redbud.inflorescence.flowers_per_peduncle = 1;
+
1823 phytomer_parameters_redbud.inflorescence.pitch = 0;
+
1824 phytomer_parameters_redbud.inflorescence.flower_prototype_function = RedbudFlowerPrototype;
+
1825 phytomer_parameters_redbud.inflorescence.flower_prototype_scale = 0.04;
+
1826 phytomer_parameters_redbud.inflorescence.fruit_prototype_function = RedbudFruitPrototype;
+
1827 phytomer_parameters_redbud.inflorescence.fruit_prototype_scale = 0.1;
+
1828 phytomer_parameters_redbud.inflorescence.fruit_gravity_factor_fraction = 0.7;
+
1829
+
1830 phytomer_parameters_redbud.phytomer_creation_function = RedbudPhytomerCreationFunction;
+
1831 phytomer_parameters_redbud.phytomer_callback_function = RedbudPhytomerCallbackFunction;
+
1832
+
1833 // ---- Shoot Parameters ---- //
+
1834
+
1835 ShootParameters shoot_parameters_main(context_ptr->getRandomGenerator());
+
1836 shoot_parameters_main.phytomer_parameters = phytomer_parameters_redbud;
+
1837 shoot_parameters_main.vegetative_bud_break_probability_min = 1.0;
+
1838 shoot_parameters_main.vegetative_bud_break_time = 2;
+
1839 shoot_parameters_main.phyllochron_min = 2;
+
1840 shoot_parameters_main.elongation_rate = 0.1;
+
1841 shoot_parameters_main.girth_area_factor = 4.f;
+
1842 shoot_parameters_main.gravitropic_curvature = 300;
+
1843 shoot_parameters_main.tortuosity = 5;
+
1844 shoot_parameters_main.internode_length_max = 0.04;
+
1845 shoot_parameters_main.internode_length_decay_rate = 0.005;
+
1846 shoot_parameters_main.internode_length_min = 0.01;
+
1847 shoot_parameters_main.insertion_angle_tip = 75;
+
1848 shoot_parameters_main.insertion_angle_decay_rate = 10;
+
1849 shoot_parameters_main.flowers_require_dormancy = true;
+
1850 shoot_parameters_main.growth_requires_dormancy = true;
+
1851 shoot_parameters_main.determinate_shoot_growth = false;
+
1852 shoot_parameters_main.max_terminal_floral_buds = 0;
+
1853 shoot_parameters_main.flower_bud_break_probability = 0.8;
+
1854 shoot_parameters_main.fruit_set_probability = 0.3;
+
1855 shoot_parameters_main.max_nodes = 25;
+
1856 shoot_parameters_main.max_nodes_per_season = 10;
+
1857 shoot_parameters_main.base_roll = 90;
+
1858
+
1859 ShootParameters shoot_parameters_trunk = shoot_parameters_main;
+
1860 shoot_parameters_trunk.phytomer_parameters.internode.pitch = 0;
+
1861 shoot_parameters_trunk.phytomer_parameters.internode.radial_subdivisions = 15;
+
1862 shoot_parameters_trunk.phytomer_parameters.internode.max_floral_buds_per_petiole = 0;
+
1863 shoot_parameters_trunk.insertion_angle_tip = 60;
+
1864 shoot_parameters_trunk.max_nodes = 75;
+
1865 shoot_parameters_trunk.max_nodes_per_season = 10;
+
1866 shoot_parameters_trunk.tortuosity = 1.5;
+
1867 shoot_parameters_trunk.defineChildShootTypes({"eastern_redbud_shoot"},{1.f});
+
1868
+
1869 defineShootType("eastern_redbud_trunk", shoot_parameters_trunk);
+
1870 defineShootType("eastern_redbud_shoot", shoot_parameters_main);
+
1871
+
1872}
+
1873
+
1874uint PlantArchitecture::buildEasternRedbudPlant(const helios::vec3 &base_position) {
+
1875
+
1876 if (shoot_types.empty()) {
+
1877 //automatically initialize redbud plant shoots
+
1878 initializeEasternRedbudShoots();
+
1879 }
+
1880
+
1881 uint plantID = addPlantInstance(base_position, 0);
+
1882
+
1883 uint uID_stem = addBaseStemShoot(plantID, 16, make_AxisRotation(context_ptr->randu(0,0.1*M_PI), context_ptr->randu(0,2*M_PI), context_ptr->randu(0,2*M_PI)), 0.0075, 0.05, 1, 1, 0.4, "eastern_redbud_trunk");
+
1884
+
1885 makePlantDormant(plantID);
+
1886 breakPlantDormancy(plantID);
+
1887
+
1888 //leave four vegetative buds on the trunk and remove the rest
+
1889 for (auto &phytomer: this->plant_instances.at(plantID).shoot_tree.at(uID_stem)->phytomers ) {
+
1890 if ( phytomer->shoot_index.x < 12 ) {
+
1891 for (auto &petiole: phytomer->axillary_vegetative_buds) {
+
1892 for (auto &vbud: petiole) {
+
1893 phytomer->setVegetativeBudState(BUD_DEAD, vbud);
+
1894 }
+
1895 }
+
1896 }
+
1897 }
+
1898
+
1899 setPlantPhenologicalThresholds(plantID, 165, -1, 3, 7, 30, 200, false);
+
1900
+
1901 plant_instances.at(plantID).max_age = 1460;
+
1902
+
1903 return plantID;
+
1904
+
1905}
+
1906
+
1907void PlantArchitecture::initializeRiceShoots() {
+
1908
+
1909 // ---- Leaf Prototype ---- //
+
1910
+
1911 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
1912 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SorghumLeaf.png";
+
1913 leaf_prototype.leaf_aspect_ratio = 0.06f;
+
1914 leaf_prototype.midrib_fold_fraction = 0.3f;
+
1915 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.2, 0);
+
1916 leaf_prototype.lateral_curvature = -0.3;
+
1917 leaf_prototype.wave_period = 0.1f;
+
1918 leaf_prototype.wave_amplitude = 0.1f;
+
1919 leaf_prototype.subdivisions = 20;
+
1920 leaf_prototype.unique_prototypes = 10;
+
1921
+
1922 // ---- Phytomer Parameters ---- //
+
1923
+
1924 PhytomerParameters phytomer_parameters_rice(context_ptr->getRandomGenerator());
+
1925
+
1926 phytomer_parameters_rice.internode.pitch = 0;
+
1927 phytomer_parameters_rice.internode.phyllotactic_angle.uniformDistribution(67, 77);
+
1928 phytomer_parameters_rice.internode.radius_initial = 0.001;
+
1929 phytomer_parameters_rice.internode.color = make_RGBcolor(0.27, 0.31, 0.16);
+
1930 phytomer_parameters_rice.internode.length_segments = 1;
+
1931 phytomer_parameters_rice.internode.radial_subdivisions = 6;
+
1932 phytomer_parameters_rice.internode.max_floral_buds_per_petiole = 0;
+
1933 phytomer_parameters_rice.internode.max_vegetative_buds_per_petiole = 0;
+
1934
+
1935 phytomer_parameters_rice.petiole.petioles_per_internode = 1;
+
1936 phytomer_parameters_rice.petiole.pitch.uniformDistribution(-40, 0);
+
1937 phytomer_parameters_rice.petiole.radius = 0.0;
+
1938 phytomer_parameters_rice.petiole.length = 0.01;
+
1939 phytomer_parameters_rice.petiole.taper = 0;
+
1940 phytomer_parameters_rice.petiole.curvature = 0;
+
1941 phytomer_parameters_rice.petiole.length_segments = 1;
+
1942
+
1943 phytomer_parameters_rice.leaf.leaves_per_petiole = 1;
+
1944 phytomer_parameters_rice.leaf.pitch = 0;
+
1945 phytomer_parameters_rice.leaf.yaw = 0;
+
1946 phytomer_parameters_rice.leaf.roll = 0;
+
1947 phytomer_parameters_rice.leaf.prototype_scale = 0.15;
+
1948 phytomer_parameters_rice.leaf.prototype = leaf_prototype;
+
1949
+
1950 phytomer_parameters_rice.peduncle.pitch = 0;
+
1951 phytomer_parameters_rice.peduncle.length.uniformDistribution(0.14,0.18);
+
1952 phytomer_parameters_rice.peduncle.radius = 0.0005;
+
1953 phytomer_parameters_rice.peduncle.color = phytomer_parameters_rice.internode.color;
+
1954 phytomer_parameters_rice.peduncle.curvature.uniformDistribution(-800,-50);
+
1955 phytomer_parameters_rice.peduncle.radial_subdivisions = 6;
+
1956 phytomer_parameters_rice.peduncle.length_segments = 8;
+
1957
+
1958 phytomer_parameters_rice.inflorescence.flowers_per_peduncle = 60;
+
1959 phytomer_parameters_rice.inflorescence.pitch.uniformDistribution(20,25);
+
1960 phytomer_parameters_rice.inflorescence.roll = 0;
+
1961 phytomer_parameters_rice.inflorescence.fruit_prototype_scale = 0.008;
+
1962 phytomer_parameters_rice.inflorescence.flower_offset = 0.012;
+
1963 phytomer_parameters_rice.inflorescence.fruit_prototype_function = RiceSpikePrototype;
+
1964
+
1965// phytomer_parameters_rice.phytomer_creation_function = RicePhytomerCreationFunction;
+
1966
+
1967 // ---- Shoot Parameters ---- //
+
1968
+
1969 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
+
1970 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_rice;
+
1971 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
+
1972 shoot_parameters_mainstem.flower_bud_break_probability = 1;
+
1973 shoot_parameters_mainstem.phyllochron_min = 2;
+
1974 shoot_parameters_mainstem.elongation_rate = 0.1;
+
1975 shoot_parameters_mainstem.girth_area_factor = 5.f;
+
1976 shoot_parameters_mainstem.gravitropic_curvature.uniformDistribution(-1000,-400);
+
1977 shoot_parameters_mainstem.internode_length_max = 0.0075;
+
1978 shoot_parameters_mainstem.internode_length_decay_rate = 0;
+
1979 shoot_parameters_mainstem.flowers_require_dormancy = false;
+
1980 shoot_parameters_mainstem.growth_requires_dormancy = false;
+
1981 shoot_parameters_mainstem.determinate_shoot_growth = false;
+
1982 shoot_parameters_mainstem.fruit_set_probability = 1.0;
+
1983 shoot_parameters_mainstem.defineChildShootTypes({"mainstem"},{1.0});
+
1984 shoot_parameters_mainstem.max_nodes = 30;
+
1985 shoot_parameters_mainstem.max_terminal_floral_buds = 5;
+
1986
+
1987 defineShootType("mainstem",shoot_parameters_mainstem);
+
1988
+
1989}
+
1990
+
1991uint PlantArchitecture::buildRicePlant(const helios::vec3 &base_position) {
+
1992
+
1993 if (shoot_types.empty()) {
+
1994 //automatically initialize rice plant shoots
+
1995 initializeRiceShoots();
+
1996 }
+
1997
+
1998 uint plantID = addPlantInstance(base_position, 0);
+
1999
+
2000 uint uID_stem = addBaseStemShoot(plantID, 1, make_AxisRotation(context_ptr->randu(0.f, 0.1f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI)), 0.001, 0.0075, 0.01, 0.01, 0, "mainstem");
+
2001
+
2002 breakPlantDormancy(plantID);
+
2003
+
2004 setPlantPhenologicalThresholds(plantID, 0, -1, -1, 4, 10, 1000, false);
+
2005
+
2006 plant_instances.at(plantID).max_age = 365;
+
2007
+
2008 return plantID;
+
2009
+
2010}
+
2011
+
2012void PlantArchitecture::initializeButterLettuceShoots() {
+
2013
+
2014 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2015 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/RomaineLettuceLeaf.png";
+
2016 leaf_prototype.leaf_aspect_ratio = 0.85f;
+
2017 leaf_prototype.midrib_fold_fraction = 0.2f;
+
2018 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.2, 0.05);
+
2019 leaf_prototype.lateral_curvature = -0.4f;
+
2020 leaf_prototype.wave_period.uniformDistribution(0.15, 0.25);
+
2021 leaf_prototype.wave_amplitude.uniformDistribution(0.05,0.1);
+
2022 leaf_prototype.subdivisions = 30;
+
2023 leaf_prototype.unique_prototypes = 10;
+
2024
+
2025 // ---- Phytomer Parameters ---- //
+
2026
+
2027 PhytomerParameters phytomer_parameters(context_ptr->getRandomGenerator());
+
2028
+
2029 phytomer_parameters.internode.pitch = 0;
+
2030 phytomer_parameters.internode.phyllotactic_angle = 137.5;
+
2031 phytomer_parameters.internode.radius_initial = 0.02;
+
2032 phytomer_parameters.internode.color = make_RGBcolor(0.402,0.423,0.413);
+
2033 phytomer_parameters.internode.length_segments = 1;
+
2034 phytomer_parameters.internode.radial_subdivisions = 10;
+
2035
+
2036 phytomer_parameters.petiole.petioles_per_internode = 1;
+
2037 phytomer_parameters.petiole.pitch.uniformDistribution(0,30);
+
2038 phytomer_parameters.petiole.radius = 0.001;
+
2039 phytomer_parameters.petiole.length = 0.001;
+
2040 phytomer_parameters.petiole.length_segments = 1;
+
2041 phytomer_parameters.petiole.radial_subdivisions = 3;
+
2042 phytomer_parameters.petiole.color = RGB::red;
+
2043
+
2044 phytomer_parameters.leaf.leaves_per_petiole = 1;
+
2045 phytomer_parameters.leaf.pitch = 10;
+
2046 phytomer_parameters.leaf.yaw = 0;
+
2047 phytomer_parameters.leaf.roll = 0;
+
2048 phytomer_parameters.leaf.prototype_scale.uniformDistribution(0.15,0.25);
+
2049 phytomer_parameters.leaf.prototype = leaf_prototype;
+
2050
+
2051 phytomer_parameters.phytomer_creation_function = ButterLettucePhytomerCreationFunction;
+
2052
+
2053 // ---- Shoot Parameters ---- //
+
2054
+
2055 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
+
2056 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters;
+
2057 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
+
2058 shoot_parameters_mainstem.phyllochron_min = 2;
+
2059 shoot_parameters_mainstem.elongation_rate = 0.15;
+
2060 shoot_parameters_mainstem.girth_area_factor = 0.f;
+
2061 shoot_parameters_mainstem.gravitropic_curvature = 10;
+
2062 shoot_parameters_mainstem.internode_length_max = 0.001;
+
2063 shoot_parameters_mainstem.internode_length_decay_rate = 0;
+
2064 shoot_parameters_mainstem.flowers_require_dormancy = false;
+
2065 shoot_parameters_mainstem.growth_requires_dormancy = false;
+
2066 shoot_parameters_mainstem.flower_bud_break_probability = 0.0;
+
2067 shoot_parameters_mainstem.max_nodes = 25;
+
2068
+
2069 defineShootType("mainstem",shoot_parameters_mainstem);
+
2070
2071
-
2072
-
2073}
-
2074
-
2075uint PlantArchitecture::buildButterLettucePlant(const helios::vec3 &base_position) {
-
2076
-
2077 if (shoot_types.empty()) {
-
2078 //automatically initialize lettuce plant shoots
-
2079 initializeButterLettuceShoots();
-
2080 }
-
2081
-
2082 uint plantID = addPlantInstance(base_position, 0);
-
2083
-
2084 uint uID_stem = addBaseStemShoot(plantID, 3, make_AxisRotation(context_ptr->randu(0.f, 0.03f * M_PI), 0.f, context_ptr->randu(0.f, 2.f * M_PI)), 0.005, 0.001, 1, 1, 0, "mainstem");
-
2085
-
2086 breakPlantDormancy(plantID);
-
2087
-
2088 setPlantPhenologicalThresholds(plantID, 0, -1, -1, -1, -1, 1000, false);
-
2089
-
2090 plant_instances.at(plantID).max_age = 365;
-
2091
-
2092 return plantID;
-
2093
-
2094}
-
2095
-
2096void PlantArchitecture::initializeSorghumShoots() {
-
2097
-
2098 // ---- Leaf Prototype ---- //
-
2099
-
2100 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2101 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SorghumLeaf.png";
-
2102 leaf_prototype.leaf_aspect_ratio = 0.2f;
-
2103 leaf_prototype.midrib_fold_fraction = 0.3f;
-
2104 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.4, -0.2);
-
2105 leaf_prototype.lateral_curvature = -0.3f;
-
2106 leaf_prototype.petiole_roll = 0.04f;
-
2107 leaf_prototype.wave_period = 0.1f;
-
2108 leaf_prototype.wave_amplitude = 0.1f;
-
2109 leaf_prototype.leaf_buckle_length.uniformDistribution(0.4,0.6);
-
2110 leaf_prototype.leaf_buckle_angle.uniformDistribution(45,55);
-
2111 leaf_prototype.subdivisions = 50;
-
2112 leaf_prototype.unique_prototypes = 10;
-
2113
-
2114 // ---- Phytomer Parameters ---- //
-
2115
-
2116 PhytomerParameters phytomer_parameters_sorghum(context_ptr->getRandomGenerator());
-
2117
-
2118 phytomer_parameters_sorghum.internode.pitch = 0;
-
2119 phytomer_parameters_sorghum.internode.phyllotactic_angle.uniformDistribution(170,190);
-
2120 phytomer_parameters_sorghum.internode.radius_initial = 0.003;
-
2121 phytomer_parameters_sorghum.internode.color = make_RGBcolor(0.09,0.13,0.06);
-
2122 phytomer_parameters_sorghum.internode.length_segments = 2;
-
2123 phytomer_parameters_sorghum.internode.radial_subdivisions = 10;
-
2124 phytomer_parameters_sorghum.internode.max_floral_buds_per_petiole = 0;
-
2125 phytomer_parameters_sorghum.internode.max_vegetative_buds_per_petiole = 0;
-
2126
-
2127 phytomer_parameters_sorghum.petiole.petioles_per_internode = 1;
-
2128 phytomer_parameters_sorghum.petiole.pitch.uniformDistribution(-40,-20);
-
2129 phytomer_parameters_sorghum.petiole.radius = 0.0;
-
2130 phytomer_parameters_sorghum.petiole.length = 0.05;
-
2131 phytomer_parameters_sorghum.petiole.taper = 0;
-
2132 phytomer_parameters_sorghum.petiole.curvature = 0;
-
2133 phytomer_parameters_sorghum.petiole.length_segments = 1;
-
2134
-
2135 phytomer_parameters_sorghum.leaf.leaves_per_petiole = 1;
-
2136 phytomer_parameters_sorghum.leaf.pitch = 0;
-
2137 phytomer_parameters_sorghum.leaf.yaw = 0;
-
2138 phytomer_parameters_sorghum.leaf.roll = 0;
-
2139 phytomer_parameters_sorghum.leaf.prototype_scale = 0.6;
-
2140 phytomer_parameters_sorghum.leaf.prototype = leaf_prototype;
-
2141
-
2142 phytomer_parameters_sorghum.peduncle.length = 0.3;
-
2143 phytomer_parameters_sorghum.peduncle.radius = 0.008;
-
2144 phytomer_parameters_sorghum.peduncle.color = phytomer_parameters_sorghum.internode.color;
-
2145 phytomer_parameters_sorghum.peduncle.radial_subdivisions = 10;
-
2146
-
2147 phytomer_parameters_sorghum.inflorescence.flowers_per_peduncle = 1;
-
2148 phytomer_parameters_sorghum.inflorescence.pitch = 0;
-
2149 phytomer_parameters_sorghum.inflorescence.roll = 0;
-
2150 phytomer_parameters_sorghum.inflorescence.fruit_prototype_scale = 0.18;
-
2151 phytomer_parameters_sorghum.inflorescence.fruit_prototype_function = SorghumPaniclePrototype;
-
2152
-
2153 phytomer_parameters_sorghum.phytomer_creation_function = SorghumPhytomerCreationFunction;
-
2154
-
2155 // ---- Shoot Parameters ---- //
-
2156
-
2157 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
-
2158 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_sorghum;
-
2159 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
-
2160 shoot_parameters_mainstem.flower_bud_break_probability = 1;
-
2161 shoot_parameters_mainstem.phyllochron_min = 2;
-
2162 shoot_parameters_mainstem.elongation_rate = 0.1;
-
2163 shoot_parameters_mainstem.girth_area_factor = 5.f;
-
2164 shoot_parameters_mainstem.gravitropic_curvature.uniformDistribution(-1000,-400);
-
2165 shoot_parameters_mainstem.internode_length_max = 0.26;
-
2166 shoot_parameters_mainstem.internode_length_decay_rate = 0;
-
2167 shoot_parameters_mainstem.flowers_require_dormancy = false;
-
2168 shoot_parameters_mainstem.growth_requires_dormancy = false;
-
2169 shoot_parameters_mainstem.determinate_shoot_growth = false;
-
2170 shoot_parameters_mainstem.flower_bud_break_probability = 1.0;
-
2171 shoot_parameters_mainstem.fruit_set_probability = 1.0;
-
2172 shoot_parameters_mainstem.defineChildShootTypes({"mainstem"},{1.0});
-
2173 shoot_parameters_mainstem.max_nodes = 16;
-
2174 shoot_parameters_mainstem.max_terminal_floral_buds = 1;
-
2175
-
2176 defineShootType("mainstem",shoot_parameters_mainstem);
-
2177
-
2178}
-
2179
-
2180uint PlantArchitecture::buildSorghumPlant(const helios::vec3 &base_position) {
-
2181
-
2182 if (shoot_types.empty()) {
-
2183 //automatically initialize sorghum plant shoots
-
2184 initializeSorghumShoots();
-
2185 }
-
2186
-
2187 uint plantID = addPlantInstance(base_position - make_vec3(0,0,0.025), 0);
-
2188
-
2189 uint uID_stem = addBaseStemShoot(plantID, 1, make_AxisRotation(context_ptr->randu(0.f, 0.075f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI)), 0.003, 0.06, 0.01, 0.01, 0, "mainstem");
-
2190
-
2191 breakPlantDormancy(plantID);
-
2192
-
2193 setPlantPhenologicalThresholds(plantID, 0, -1, -1, 4, 15, 1000, false);
-
2194
-
2195 plant_instances.at(plantID).max_age = 365;
-
2196
-
2197 return plantID;
-
2198
-
2199}
-
2200
-
2201void PlantArchitecture::initializeSoybeanShoots() {
-
2202
-
2203 // ---- Leaf Prototype ---- //
-
2204
-
2205 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2206 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SoybeanLeaf.png";
-
2207 leaf_prototype.leaf_aspect_ratio = 1.f;
-
2208 leaf_prototype.midrib_fold_fraction = 0.1f;
-
2209 leaf_prototype.longitudinal_curvature.uniformDistribution(0.1,0.2);
-
2210 leaf_prototype.lateral_curvature = 0.45;
-
2211 leaf_prototype.subdivisions = 8;
-
2212 leaf_prototype.unique_prototypes = 5;
-
2213 leaf_prototype.build_petiolule = true;
-
2214
-
2215 PhytomerParameters phytomer_parameters_trifoliate(context_ptr->getRandomGenerator());
-
2216
-
2217 phytomer_parameters_trifoliate.internode.pitch = 20;
-
2218 phytomer_parameters_trifoliate.internode.phyllotactic_angle.uniformDistribution(145, 215);
-
2219 phytomer_parameters_trifoliate.internode.radius_initial = 0.002;
-
2220 phytomer_parameters_trifoliate.internode.max_floral_buds_per_petiole = 1;
-
2221 phytomer_parameters_trifoliate.internode.max_vegetative_buds_per_petiole = 1;
-
2222 phytomer_parameters_trifoliate.internode.color = make_RGBcolor(0.2,0.25,0.05);
-
2223 phytomer_parameters_trifoliate.internode.length_segments = 5;
-
2224
-
2225 phytomer_parameters_trifoliate.petiole.petioles_per_internode = 1;
-
2226 phytomer_parameters_trifoliate.petiole.pitch.uniformDistribution(15,40);
-
2227 phytomer_parameters_trifoliate.petiole.radius = 0.002;
-
2228 phytomer_parameters_trifoliate.petiole.length.uniformDistribution(0.12,0.16);
-
2229 phytomer_parameters_trifoliate.petiole.taper = 0.25;
-
2230 phytomer_parameters_trifoliate.petiole.curvature.uniformDistribution(-250,50);
-
2231 phytomer_parameters_trifoliate.petiole.color = phytomer_parameters_trifoliate.internode.color;
-
2232 phytomer_parameters_trifoliate.petiole.length_segments = 5;
-
2233 phytomer_parameters_trifoliate.petiole.radial_subdivisions = 6;
-
2234
-
2235 phytomer_parameters_trifoliate.leaf.leaves_per_petiole = 3;
-
2236 phytomer_parameters_trifoliate.leaf.pitch.uniformDistribution(-30, 10);
-
2237 phytomer_parameters_trifoliate.leaf.yaw = 10;
-
2238 phytomer_parameters_trifoliate.leaf.roll.uniformDistribution(-25,5);
-
2239 phytomer_parameters_trifoliate.leaf.leaflet_offset = 0.5;
-
2240 phytomer_parameters_trifoliate.leaf.leaflet_scale = 0.9;
-
2241 phytomer_parameters_trifoliate.leaf.prototype_scale.uniformDistribution(0.1,0.14);
-
2242 phytomer_parameters_trifoliate.leaf.prototype = leaf_prototype;
-
2243
-
2244 phytomer_parameters_trifoliate.peduncle.length = 0.01;
-
2245 phytomer_parameters_trifoliate.peduncle.radius = 0.0005;
-
2246 phytomer_parameters_trifoliate.peduncle.pitch.uniformDistribution(0, 40);
-
2247 phytomer_parameters_trifoliate.peduncle.roll = 90;
-
2248 phytomer_parameters_trifoliate.peduncle.curvature.uniformDistribution(-500, 500);
-
2249 phytomer_parameters_trifoliate.peduncle.color = phytomer_parameters_trifoliate.internode.color;
-
2250 phytomer_parameters_trifoliate.peduncle.length_segments = 1;
-
2251 phytomer_parameters_trifoliate.peduncle.radial_subdivisions = 6;
-
2252
-
2253 phytomer_parameters_trifoliate.inflorescence.flowers_per_peduncle.uniformDistribution(1, 4);
-
2254 phytomer_parameters_trifoliate.inflorescence.flower_offset = 0.2;
-
2255 phytomer_parameters_trifoliate.inflorescence.pitch.uniformDistribution(50,70);
-
2256 phytomer_parameters_trifoliate.inflorescence.roll.uniformDistribution(-20,20);
-
2257 phytomer_parameters_trifoliate.inflorescence.flower_prototype_scale = 0.015;
-
2258 phytomer_parameters_trifoliate.inflorescence.flower_prototype_function = SoybeanFlowerPrototype;
-
2259 phytomer_parameters_trifoliate.inflorescence.fruit_prototype_scale.uniformDistribution(0.1,0.12);
-
2260 phytomer_parameters_trifoliate.inflorescence.fruit_prototype_function = SoybeanFruitPrototype;
-
2261 phytomer_parameters_trifoliate.inflorescence.fruit_gravity_factor_fraction.uniformDistribution(0.8,1.0);
-
2262
-
2263 PhytomerParameters phytomer_parameters_unifoliate = phytomer_parameters_trifoliate;
-
2264 phytomer_parameters_unifoliate.internode.pitch = 0;
-
2265 phytomer_parameters_unifoliate.internode.max_vegetative_buds_per_petiole = 0;
-
2266 phytomer_parameters_unifoliate.internode.max_floral_buds_per_petiole = 0;
-
2267 phytomer_parameters_unifoliate.petiole.petioles_per_internode = 2;
-
2268 phytomer_parameters_unifoliate.petiole.length = 0.01;
-
2269 phytomer_parameters_unifoliate.petiole.radius = 0.001;
-
2270 phytomer_parameters_unifoliate.petiole.pitch.uniformDistribution(60,80);
-
2271 phytomer_parameters_unifoliate.leaf.leaves_per_petiole = 1;
-
2272 phytomer_parameters_unifoliate.leaf.prototype_scale = 0.02;
-
2273 phytomer_parameters_unifoliate.leaf.pitch.uniformDistribution(-10, 10);
-
2274 phytomer_parameters_unifoliate.leaf.prototype = leaf_prototype;
-
2275
-
2276 // ---- Shoot Parameters ---- //
-
2277
-
2278 ShootParameters shoot_parameters_trifoliate(context_ptr->getRandomGenerator());
-
2279 shoot_parameters_trifoliate.phytomer_parameters = phytomer_parameters_trifoliate;
-
2280 shoot_parameters_trifoliate.phytomer_parameters.phytomer_creation_function = BeanPhytomerCreationFunction;
-
2281
-
2282 shoot_parameters_trifoliate.max_nodes = 25;
-
2283 shoot_parameters_trifoliate.insertion_angle_tip.uniformDistribution(20,30);
-
2284// shoot_parameters_trifoliate.child_insertion_angle_decay_rate = 0; (default)
-
2285 shoot_parameters_trifoliate.internode_length_max = 0.035;
-
2286// shoot_parameters_trifoliate.child_internode_length_min = 0.0; (default)
-
2287// shoot_parameters_trifoliate.child_internode_length_decay_rate = 0; (default)
-
2288 shoot_parameters_trifoliate.base_roll = 90;
-
2289 shoot_parameters_trifoliate.base_yaw.uniformDistribution(-20,20);
-
2290 shoot_parameters_trifoliate.gravitropic_curvature = 400;
-
2291
-
2292 shoot_parameters_trifoliate.phyllochron_min = 2;
-
2293 shoot_parameters_trifoliate.elongation_rate = 0.1;
-
2294 shoot_parameters_trifoliate.girth_area_factor = 2.f;
-
2295 shoot_parameters_trifoliate.vegetative_bud_break_time = 15;
-
2296 shoot_parameters_trifoliate.vegetative_bud_break_probability_min = 0.05;
-
2297 shoot_parameters_trifoliate.vegetative_bud_break_probability_decay_rate = 0.6;
-
2298// shoot_parameters_trifoliate.max_terminal_floral_buds = 0; (default)
-
2299 shoot_parameters_trifoliate.flower_bud_break_probability.uniformDistribution(0.8,1.0);
-
2300 shoot_parameters_trifoliate.fruit_set_probability = 0.4;
-
2301// shoot_parameters_trifoliate.flowers_require_dormancy = false; (default)
-
2302// shoot_parameters_trifoliate.growth_requires_dormancy = false; (default)
-
2303// shoot_parameters_trifoliate.determinate_shoot_growth = true; (default)
-
2304
-
2305 shoot_parameters_trifoliate.defineChildShootTypes({"trifoliate"},{1.0});
+
2072}
+
2073
+
2074uint PlantArchitecture::buildButterLettucePlant(const helios::vec3 &base_position) {
+
2075
+
2076 if (shoot_types.empty()) {
+
2077 //automatically initialize lettuce plant shoots
+
2078 initializeButterLettuceShoots();
+
2079 }
+
2080
+
2081 uint plantID = addPlantInstance(base_position, 0);
+
2082
+
2083 uint uID_stem = addBaseStemShoot(plantID, 3, make_AxisRotation(context_ptr->randu(0.f, 0.03f * M_PI), 0.f, context_ptr->randu(0.f, 2.f * M_PI)), 0.005, 0.001, 1, 1, 0, "mainstem");
+
2084
+
2085 breakPlantDormancy(plantID);
+
2086
+
2087 setPlantPhenologicalThresholds(plantID, 0, -1, -1, -1, -1, 1000, false);
+
2088
+
2089 plant_instances.at(plantID).max_age = 365;
+
2090
+
2091 return plantID;
+
2092
+
2093}
+
2094
+
2095void PlantArchitecture::initializeSorghumShoots() {
+
2096
+
2097 // ---- Leaf Prototype ---- //
+
2098
+
2099 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2100 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SorghumLeaf.png";
+
2101 leaf_prototype.leaf_aspect_ratio = 0.2f;
+
2102 leaf_prototype.midrib_fold_fraction = 0.3f;
+
2103 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.4, -0.2);
+
2104 leaf_prototype.lateral_curvature = -0.3f;
+
2105 leaf_prototype.petiole_roll = 0.04f;
+
2106 leaf_prototype.wave_period = 0.1f;
+
2107 leaf_prototype.wave_amplitude = 0.1f;
+
2108 leaf_prototype.leaf_buckle_length.uniformDistribution(0.4,0.6);
+
2109 leaf_prototype.leaf_buckle_angle.uniformDistribution(45,55);
+
2110 leaf_prototype.subdivisions = 50;
+
2111 leaf_prototype.unique_prototypes = 10;
+
2112
+
2113 // ---- Phytomer Parameters ---- //
+
2114
+
2115 PhytomerParameters phytomer_parameters_sorghum(context_ptr->getRandomGenerator());
+
2116
+
2117 phytomer_parameters_sorghum.internode.pitch = 0;
+
2118 phytomer_parameters_sorghum.internode.phyllotactic_angle.uniformDistribution(170,190);
+
2119 phytomer_parameters_sorghum.internode.radius_initial = 0.003;
+
2120 phytomer_parameters_sorghum.internode.color = make_RGBcolor(0.09,0.13,0.06);
+
2121 phytomer_parameters_sorghum.internode.length_segments = 2;
+
2122 phytomer_parameters_sorghum.internode.radial_subdivisions = 10;
+
2123 phytomer_parameters_sorghum.internode.max_floral_buds_per_petiole = 0;
+
2124 phytomer_parameters_sorghum.internode.max_vegetative_buds_per_petiole = 0;
+
2125
+
2126 phytomer_parameters_sorghum.petiole.petioles_per_internode = 1;
+
2127 phytomer_parameters_sorghum.petiole.pitch.uniformDistribution(-40,-20);
+
2128 phytomer_parameters_sorghum.petiole.radius = 0.0;
+
2129 phytomer_parameters_sorghum.petiole.length = 0.05;
+
2130 phytomer_parameters_sorghum.petiole.taper = 0;
+
2131 phytomer_parameters_sorghum.petiole.curvature = 0;
+
2132 phytomer_parameters_sorghum.petiole.length_segments = 1;
+
2133
+
2134 phytomer_parameters_sorghum.leaf.leaves_per_petiole = 1;
+
2135 phytomer_parameters_sorghum.leaf.pitch = 0;
+
2136 phytomer_parameters_sorghum.leaf.yaw = 0;
+
2137 phytomer_parameters_sorghum.leaf.roll = 0;
+
2138 phytomer_parameters_sorghum.leaf.prototype_scale = 0.6;
+
2139 phytomer_parameters_sorghum.leaf.prototype = leaf_prototype;
+
2140
+
2141 phytomer_parameters_sorghum.peduncle.length = 0.3;
+
2142 phytomer_parameters_sorghum.peduncle.radius = 0.008;
+
2143 phytomer_parameters_sorghum.peduncle.color = phytomer_parameters_sorghum.internode.color;
+
2144 phytomer_parameters_sorghum.peduncle.radial_subdivisions = 10;
+
2145
+
2146 phytomer_parameters_sorghum.inflorescence.flowers_per_peduncle = 1;
+
2147 phytomer_parameters_sorghum.inflorescence.pitch = 0;
+
2148 phytomer_parameters_sorghum.inflorescence.roll = 0;
+
2149 phytomer_parameters_sorghum.inflorescence.fruit_prototype_scale = 0.18;
+
2150 phytomer_parameters_sorghum.inflorescence.fruit_prototype_function = SorghumPaniclePrototype;
+
2151
+
2152 phytomer_parameters_sorghum.phytomer_creation_function = SorghumPhytomerCreationFunction;
+
2153
+
2154 // ---- Shoot Parameters ---- //
+
2155
+
2156 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
+
2157 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_sorghum;
+
2158 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
+
2159 shoot_parameters_mainstem.flower_bud_break_probability = 1;
+
2160 shoot_parameters_mainstem.phyllochron_min = 2;
+
2161 shoot_parameters_mainstem.elongation_rate = 0.1;
+
2162 shoot_parameters_mainstem.girth_area_factor = 5.f;
+
2163 shoot_parameters_mainstem.gravitropic_curvature.uniformDistribution(-1000,-400);
+
2164 shoot_parameters_mainstem.internode_length_max = 0.26;
+
2165 shoot_parameters_mainstem.internode_length_decay_rate = 0;
+
2166 shoot_parameters_mainstem.flowers_require_dormancy = false;
+
2167 shoot_parameters_mainstem.growth_requires_dormancy = false;
+
2168 shoot_parameters_mainstem.determinate_shoot_growth = false;
+
2169 shoot_parameters_mainstem.flower_bud_break_probability = 1.0;
+
2170 shoot_parameters_mainstem.fruit_set_probability = 1.0;
+
2171 shoot_parameters_mainstem.defineChildShootTypes({"mainstem"},{1.0});
+
2172 shoot_parameters_mainstem.max_nodes = 16;
+
2173 shoot_parameters_mainstem.max_terminal_floral_buds = 1;
+
2174
+
2175 defineShootType("mainstem",shoot_parameters_mainstem);
+
2176
+
2177}
+
2178
+
2179uint PlantArchitecture::buildSorghumPlant(const helios::vec3 &base_position) {
+
2180
+
2181 if (shoot_types.empty()) {
+
2182 //automatically initialize sorghum plant shoots
+
2183 initializeSorghumShoots();
+
2184 }
+
2185
+
2186 uint plantID = addPlantInstance(base_position - make_vec3(0,0,0.025), 0);
+
2187
+
2188 uint uID_stem = addBaseStemShoot(plantID, 1, make_AxisRotation(context_ptr->randu(0.f, 0.075f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI)), 0.003, 0.06, 0.01, 0.01, 0, "mainstem");
+
2189
+
2190 breakPlantDormancy(plantID);
+
2191
+
2192 setPlantPhenologicalThresholds(plantID, 0, -1, -1, 4, 15, 1000, false);
+
2193
+
2194 plant_instances.at(plantID).max_age = 365;
+
2195
+
2196 return plantID;
+
2197
+
2198}
+
2199
+
2200void PlantArchitecture::initializeSoybeanShoots() {
+
2201
+
2202 // ---- Leaf Prototype ---- //
+
2203
+
2204 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2205 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SoybeanLeaf.png";
+
2206 leaf_prototype.leaf_aspect_ratio = 1.f;
+
2207 leaf_prototype.midrib_fold_fraction = 0.1f;
+
2208 leaf_prototype.longitudinal_curvature.uniformDistribution(0.1,0.2);
+
2209 leaf_prototype.lateral_curvature = 0.45;
+
2210 leaf_prototype.subdivisions = 8;
+
2211 leaf_prototype.unique_prototypes = 5;
+
2212 leaf_prototype.build_petiolule = true;
+
2213
+
2214 PhytomerParameters phytomer_parameters_trifoliate(context_ptr->getRandomGenerator());
+
2215
+
2216 phytomer_parameters_trifoliate.internode.pitch = 20;
+
2217 phytomer_parameters_trifoliate.internode.phyllotactic_angle.uniformDistribution(145, 215);
+
2218 phytomer_parameters_trifoliate.internode.radius_initial = 0.002;
+
2219 phytomer_parameters_trifoliate.internode.max_floral_buds_per_petiole = 1;
+
2220 phytomer_parameters_trifoliate.internode.max_vegetative_buds_per_petiole = 1;
+
2221 phytomer_parameters_trifoliate.internode.color = make_RGBcolor(0.2,0.25,0.05);
+
2222 phytomer_parameters_trifoliate.internode.length_segments = 5;
+
2223
+
2224 phytomer_parameters_trifoliate.petiole.petioles_per_internode = 1;
+
2225 phytomer_parameters_trifoliate.petiole.pitch.uniformDistribution(15,40);
+
2226 phytomer_parameters_trifoliate.petiole.radius = 0.002;
+
2227 phytomer_parameters_trifoliate.petiole.length.uniformDistribution(0.12,0.16);
+
2228 phytomer_parameters_trifoliate.petiole.taper = 0.25;
+
2229 phytomer_parameters_trifoliate.petiole.curvature.uniformDistribution(-250,50);
+
2230 phytomer_parameters_trifoliate.petiole.color = phytomer_parameters_trifoliate.internode.color;
+
2231 phytomer_parameters_trifoliate.petiole.length_segments = 5;
+
2232 phytomer_parameters_trifoliate.petiole.radial_subdivisions = 6;
+
2233
+
2234 phytomer_parameters_trifoliate.leaf.leaves_per_petiole = 3;
+
2235 phytomer_parameters_trifoliate.leaf.pitch.uniformDistribution(-30, 10);
+
2236 phytomer_parameters_trifoliate.leaf.yaw = 10;
+
2237 phytomer_parameters_trifoliate.leaf.roll.uniformDistribution(-25,5);
+
2238 phytomer_parameters_trifoliate.leaf.leaflet_offset = 0.5;
+
2239 phytomer_parameters_trifoliate.leaf.leaflet_scale = 0.9;
+
2240 phytomer_parameters_trifoliate.leaf.prototype_scale.uniformDistribution(0.1,0.14);
+
2241 phytomer_parameters_trifoliate.leaf.prototype = leaf_prototype;
+
2242
+
2243 phytomer_parameters_trifoliate.peduncle.length = 0.01;
+
2244 phytomer_parameters_trifoliate.peduncle.radius = 0.0005;
+
2245 phytomer_parameters_trifoliate.peduncle.pitch.uniformDistribution(0, 40);
+
2246 phytomer_parameters_trifoliate.peduncle.roll = 90;
+
2247 phytomer_parameters_trifoliate.peduncle.curvature.uniformDistribution(-500, 500);
+
2248 phytomer_parameters_trifoliate.peduncle.color = phytomer_parameters_trifoliate.internode.color;
+
2249 phytomer_parameters_trifoliate.peduncle.length_segments = 1;
+
2250 phytomer_parameters_trifoliate.peduncle.radial_subdivisions = 6;
+
2251
+
2252 phytomer_parameters_trifoliate.inflorescence.flowers_per_peduncle.uniformDistribution(1, 4);
+
2253 phytomer_parameters_trifoliate.inflorescence.flower_offset = 0.2;
+
2254 phytomer_parameters_trifoliate.inflorescence.pitch.uniformDistribution(50,70);
+
2255 phytomer_parameters_trifoliate.inflorescence.roll.uniformDistribution(-20,20);
+
2256 phytomer_parameters_trifoliate.inflorescence.flower_prototype_scale = 0.015;
+
2257 phytomer_parameters_trifoliate.inflorescence.flower_prototype_function = SoybeanFlowerPrototype;
+
2258 phytomer_parameters_trifoliate.inflorescence.fruit_prototype_scale.uniformDistribution(0.1,0.12);
+
2259 phytomer_parameters_trifoliate.inflorescence.fruit_prototype_function = SoybeanFruitPrototype;
+
2260 phytomer_parameters_trifoliate.inflorescence.fruit_gravity_factor_fraction.uniformDistribution(0.8,1.0);
+
2261
+
2262 PhytomerParameters phytomer_parameters_unifoliate = phytomer_parameters_trifoliate;
+
2263 phytomer_parameters_unifoliate.internode.pitch = 0;
+
2264 phytomer_parameters_unifoliate.internode.max_vegetative_buds_per_petiole = 0;
+
2265 phytomer_parameters_unifoliate.internode.max_floral_buds_per_petiole = 0;
+
2266 phytomer_parameters_unifoliate.petiole.petioles_per_internode = 2;
+
2267 phytomer_parameters_unifoliate.petiole.length = 0.01;
+
2268 phytomer_parameters_unifoliate.petiole.radius = 0.001;
+
2269 phytomer_parameters_unifoliate.petiole.pitch.uniformDistribution(60,80);
+
2270 phytomer_parameters_unifoliate.leaf.leaves_per_petiole = 1;
+
2271 phytomer_parameters_unifoliate.leaf.prototype_scale = 0.02;
+
2272 phytomer_parameters_unifoliate.leaf.pitch.uniformDistribution(-10, 10);
+
2273 phytomer_parameters_unifoliate.leaf.prototype = leaf_prototype;
+
2274
+
2275 // ---- Shoot Parameters ---- //
+
2276
+
2277 ShootParameters shoot_parameters_trifoliate(context_ptr->getRandomGenerator());
+
2278 shoot_parameters_trifoliate.phytomer_parameters = phytomer_parameters_trifoliate;
+
2279 shoot_parameters_trifoliate.phytomer_parameters.phytomer_creation_function = BeanPhytomerCreationFunction;
+
2280
+
2281 shoot_parameters_trifoliate.max_nodes = 25;
+
2282 shoot_parameters_trifoliate.insertion_angle_tip.uniformDistribution(20,30);
+
2283// shoot_parameters_trifoliate.child_insertion_angle_decay_rate = 0; (default)
+
2284 shoot_parameters_trifoliate.internode_length_max = 0.035;
+
2285// shoot_parameters_trifoliate.child_internode_length_min = 0.0; (default)
+
2286// shoot_parameters_trifoliate.child_internode_length_decay_rate = 0; (default)
+
2287 shoot_parameters_trifoliate.base_roll = 90;
+
2288 shoot_parameters_trifoliate.base_yaw.uniformDistribution(-20,20);
+
2289 shoot_parameters_trifoliate.gravitropic_curvature = 400;
+
2290
+
2291 shoot_parameters_trifoliate.phyllochron_min = 2;
+
2292 shoot_parameters_trifoliate.elongation_rate = 0.1;
+
2293 shoot_parameters_trifoliate.girth_area_factor = 2.f;
+
2294 shoot_parameters_trifoliate.vegetative_bud_break_time = 15;
+
2295 shoot_parameters_trifoliate.vegetative_bud_break_probability_min = 0.05;
+
2296 shoot_parameters_trifoliate.vegetative_bud_break_probability_decay_rate = 0.6;
+
2297// shoot_parameters_trifoliate.max_terminal_floral_buds = 0; (default)
+
2298 shoot_parameters_trifoliate.flower_bud_break_probability.uniformDistribution(0.8,1.0);
+
2299 shoot_parameters_trifoliate.fruit_set_probability = 0.4;
+
2300// shoot_parameters_trifoliate.flowers_require_dormancy = false; (default)
+
2301// shoot_parameters_trifoliate.growth_requires_dormancy = false; (default)
+
2302// shoot_parameters_trifoliate.determinate_shoot_growth = true; (default)
+
2303
+
2304 shoot_parameters_trifoliate.defineChildShootTypes({"trifoliate"},{1.0});
+
2305
2306
-
2307
-
2308 ShootParameters shoot_parameters_unifoliate = shoot_parameters_trifoliate;
-
2309 shoot_parameters_unifoliate.phytomer_parameters = phytomer_parameters_unifoliate;
-
2310 shoot_parameters_unifoliate.max_nodes = 1;
-
2311 shoot_parameters_unifoliate.flower_bud_break_probability = 0;
-
2312 shoot_parameters_unifoliate.insertion_angle_tip = 0;
-
2313 shoot_parameters_unifoliate.insertion_angle_decay_rate = 0;
-
2314 shoot_parameters_unifoliate.vegetative_bud_break_time = 8;
-
2315 shoot_parameters_unifoliate.defineChildShootTypes({"trifoliate"},{1.0});
-
2316
-
2317 defineShootType("unifoliate",shoot_parameters_unifoliate);
-
2318 defineShootType("trifoliate",shoot_parameters_trifoliate);
-
2319
-
2320}
-
2321
-
2322uint PlantArchitecture::buildSoybeanPlant(const helios::vec3 &base_position) {
-
2323
-
2324 if (shoot_types.empty()) {
-
2325 //automatically initialize bean plant shoots
-
2326 initializeSoybeanShoots();
-
2327 }
-
2328
-
2329 uint plantID = addPlantInstance(base_position, 0);
-
2330
-
2331 AxisRotation base_rotation = make_AxisRotation(context_ptr->randu(0.f, 0.05f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI));
-
2332 uint uID_unifoliate = addBaseStemShoot(plantID, 1, base_rotation, 0.0005, 0.04, 0.01, 0.01, 0, "unifoliate");
-
2333
-
2334 appendShoot(plantID, uID_unifoliate, 1, make_AxisRotation(0, 0, 0.5f * M_PI), shoot_types.at("trifoliate").phytomer_parameters.internode.radius_initial.val(), shoot_types.at("trifoliate").internode_length_max.val(), 0.1, 0.1, 0, "trifoliate");
-
2335
-
2336 breakPlantDormancy(plantID);
-
2337
-
2338 setPlantPhenologicalThresholds(plantID, 0, 40, 5, 5, 30, 1000, false);
-
2339
-
2340 plant_instances.at(plantID).max_age = 365;
-
2341
-
2342 return plantID;
-
2343
-
2344}
-
2345
-
2346void PlantArchitecture::initializeStrawberryShoots() {
-
2347
-
2348 // ---- Leaf Prototype ---- //
-
2349
-
2350 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2351 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/StrawberryLeaf.png";
-
2352 leaf_prototype.leaf_aspect_ratio = 1.f;
-
2353 leaf_prototype.midrib_fold_fraction = 0.2f;
-
2354 leaf_prototype.longitudinal_curvature = 0.15f;
-
2355 leaf_prototype.lateral_curvature = 0.4f;
-
2356 leaf_prototype.wave_period = 0.3f;
-
2357 leaf_prototype.wave_amplitude = 0.01f;
-
2358 leaf_prototype.subdivisions = 6;
-
2359 leaf_prototype.unique_prototypes = 10;
-
2360
-
2361 // ---- Phytomer Parameters ---- //
-
2362
-
2363 PhytomerParameters phytomer_parameters(context_ptr->getRandomGenerator());
-
2364
-
2365 phytomer_parameters.internode.pitch = 10;
-
2366 phytomer_parameters.internode.phyllotactic_angle.uniformDistribution(80,100);
-
2367 phytomer_parameters.internode.radius_initial = 0.001;
-
2368 phytomer_parameters.internode.color = make_RGBcolor(0.38, 0.48, 0.1);
-
2369 phytomer_parameters.internode.length_segments = 1;
-
2370
-
2371 phytomer_parameters.petiole.petioles_per_internode = 1;
-
2372 phytomer_parameters.petiole.pitch.uniformDistribution(0,45);
-
2373 phytomer_parameters.petiole.radius = 0.0025;
-
2374 phytomer_parameters.petiole.length.uniformDistribution(0.15,0.25);
-
2375 phytomer_parameters.petiole.taper = 0.5;
-
2376 phytomer_parameters.petiole.curvature.uniformDistribution(-300,100);
-
2377 phytomer_parameters.petiole.color = make_RGBcolor(0.24, 0.28, 0.08);
-
2378 phytomer_parameters.petiole.length_segments = 5;
-
2379
-
2380 phytomer_parameters.leaf.leaves_per_petiole = 3;
-
2381 phytomer_parameters.leaf.pitch.uniformDistribution(-30,10);
-
2382 phytomer_parameters.leaf.yaw = 20;
-
2383 phytomer_parameters.leaf.roll = -30;
-
2384 phytomer_parameters.leaf.leaflet_offset = 0.01;
-
2385 phytomer_parameters.leaf.leaflet_scale = 1.0;
-
2386 phytomer_parameters.leaf.prototype_scale = 0.1;
-
2387 phytomer_parameters.leaf.prototype = leaf_prototype;
-
2388
-
2389 phytomer_parameters.peduncle.length = 0.17;
-
2390 phytomer_parameters.peduncle.radius = 0.00075;
-
2391 phytomer_parameters.peduncle.pitch = 35;
-
2392 phytomer_parameters.peduncle.roll = 0;
-
2393 phytomer_parameters.peduncle.curvature = -200;
-
2394 phytomer_parameters.peduncle.length_segments = 5;
-
2395 phytomer_parameters.peduncle.radial_subdivisions = 6;
-
2396 phytomer_parameters.peduncle.color = phytomer_parameters.petiole.color;
-
2397
-
2398 phytomer_parameters.inflorescence.flowers_per_peduncle.uniformDistribution(1, 3);
-
2399 phytomer_parameters.inflorescence.flower_offset = 0.2;
-
2400 phytomer_parameters.inflorescence.pitch = 70;
-
2401 phytomer_parameters.inflorescence.roll = 90;
-
2402 phytomer_parameters.inflorescence.flower_prototype_scale = 0.04;
-
2403 phytomer_parameters.inflorescence.flower_prototype_function = StrawberryFlowerPrototype;
-
2404 phytomer_parameters.inflorescence.fruit_prototype_scale = 0.06;
-
2405 phytomer_parameters.inflorescence.fruit_prototype_function = StrawberryFruitPrototype;
-
2406 phytomer_parameters.inflorescence.fruit_gravity_factor_fraction = 0.65;
-
2407
-
2408 // ---- Shoot Parameters ---- //
-
2409
-
2410 ShootParameters shoot_parameters(context_ptr->getRandomGenerator());
-
2411 shoot_parameters.phytomer_parameters = phytomer_parameters;
-
2412
-
2413 shoot_parameters.max_nodes = 15;
-
2414 shoot_parameters.insertion_angle_tip = 40;
-
2415 shoot_parameters.insertion_angle_decay_rate = 0;
-
2416 shoot_parameters.internode_length_max = 0.015;
-
2417 shoot_parameters.internode_length_decay_rate = 0;
-
2418 shoot_parameters.internode_length_min = 0.0;
-
2419 shoot_parameters.base_roll = 90;
-
2420 shoot_parameters.base_yaw.uniformDistribution(-20,20);
-
2421 shoot_parameters.gravitropic_curvature.uniformDistribution(-10,0);
-
2422 shoot_parameters.tortuosity = 0;
-
2423
-
2424 shoot_parameters.phyllochron_min = 2;
-
2425 shoot_parameters.elongation_rate = 0.1;
-
2426 shoot_parameters.girth_area_factor = 2.f;
-
2427 shoot_parameters.vegetative_bud_break_time = 15;
-
2428 shoot_parameters.vegetative_bud_break_probability_min = 0.1;
-
2429 shoot_parameters.vegetative_bud_break_probability_decay_rate = -0.4;
-
2430 shoot_parameters.flower_bud_break_probability = 1;
-
2431 shoot_parameters.fruit_set_probability = 0.5;
-
2432 shoot_parameters.flowers_require_dormancy = false;
-
2433 shoot_parameters.growth_requires_dormancy = false;
-
2434 shoot_parameters.determinate_shoot_growth = true;
-
2435
-
2436 shoot_parameters.defineChildShootTypes({"mainstem"},{1.0});
-
2437
-
2438 defineShootType("mainstem",shoot_parameters);
-
2439
-
2440}
-
2441
-
2442uint PlantArchitecture::buildStrawberryPlant(const helios::vec3 &base_position) {
-
2443
-
2444 if (shoot_types.empty()) {
-
2445 //automatically initialize strawberry plant shoots
-
2446 initializeStrawberryShoots();
-
2447 }
-
2448
-
2449 uint plantID = addPlantInstance(base_position, 0);
-
2450
-
2451 AxisRotation base_rotation = make_AxisRotation(0, context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI));
-
2452 uint uID_stem = addBaseStemShoot(plantID, 1, base_rotation, 0.001, 0.004, 0.01, 0.01, 0, "mainstem");
-
2453
-
2454 breakPlantDormancy(plantID);
-
2455
-
2456 setPlantPhenologicalThresholds(plantID, 0, 40, 5, 5, 30, 100, false);
-
2457
-
2458 plant_instances.at(plantID).max_age = 365;
-
2459
-
2460 return plantID;
-
2461
-
2462}
-
2463
-
2464void PlantArchitecture::initializeSugarbeetShoots() {
-
2465
-
2466 // ---- Leaf Prototype ---- //
-
2467
-
2468 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2469 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SugarbeetLeaf.png";
-
2470 leaf_prototype.leaf_aspect_ratio = 0.4f;
-
2471 leaf_prototype.midrib_fold_fraction = 0.1f;
-
2472 leaf_prototype.longitudinal_curvature = -0.2f;
-
2473 leaf_prototype.lateral_curvature = -0.4f;
-
2474 leaf_prototype.petiole_roll = 0.75f;
-
2475 leaf_prototype.wave_period.uniformDistribution( 0.08f, 0.15f);
-
2476 leaf_prototype.wave_amplitude.uniformDistribution(0.02, 0.04);
-
2477 leaf_prototype.subdivisions = 20;;
-
2478 leaf_prototype.unique_prototypes = 10;
-
2479
-
2480 // ---- Phytomer Parameters ---- //
-
2481
-
2482 PhytomerParameters phytomer_parameters_sugarbeet(context_ptr->getRandomGenerator());
-
2483
-
2484 phytomer_parameters_sugarbeet.internode.pitch = 0;
-
2485 phytomer_parameters_sugarbeet.internode.phyllotactic_angle = 137.5;
-
2486 phytomer_parameters_sugarbeet.internode.radius_initial = 0.005;
-
2487 phytomer_parameters_sugarbeet.internode.color = make_RGBcolor(0.44,0.58,0.19);
-
2488 phytomer_parameters_sugarbeet.internode.length_segments = 1;
-
2489 phytomer_parameters_sugarbeet.internode.max_vegetative_buds_per_petiole = 0;
-
2490 phytomer_parameters_sugarbeet.internode.max_floral_buds_per_petiole = 0;
-
2491
-
2492 phytomer_parameters_sugarbeet.petiole.petioles_per_internode = 1;
-
2493 phytomer_parameters_sugarbeet.petiole.pitch.uniformDistribution(0,40);
-
2494 phytomer_parameters_sugarbeet.petiole.radius = 0.005;
-
2495 phytomer_parameters_sugarbeet.petiole.length.uniformDistribution(0.15,0.2);
-
2496 phytomer_parameters_sugarbeet.petiole.taper = 0.6;
-
2497 phytomer_parameters_sugarbeet.petiole.curvature.uniformDistribution(-300,100);
-
2498 phytomer_parameters_sugarbeet.petiole.color = phytomer_parameters_sugarbeet.internode.color;
-
2499 phytomer_parameters_sugarbeet.petiole.length_segments = 8;
-
2500
-
2501 phytomer_parameters_sugarbeet.leaf.leaves_per_petiole = 1;
-
2502 phytomer_parameters_sugarbeet.leaf.pitch.uniformDistribution(-10,0);
-
2503 phytomer_parameters_sugarbeet.leaf.yaw.uniformDistribution(-5,5);
-
2504 phytomer_parameters_sugarbeet.leaf.roll.uniformDistribution(-15,15);
-
2505 phytomer_parameters_sugarbeet.leaf.prototype_scale.uniformDistribution(0.15,0.25);
-
2506 phytomer_parameters_sugarbeet.leaf.prototype = leaf_prototype;
-
2507
-
2508 // ---- Shoot Parameters ---- //
-
2509
-
2510 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
-
2511 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_sugarbeet;
-
2512 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
-
2513 shoot_parameters_mainstem.phyllochron_min = 2;
-
2514 shoot_parameters_mainstem.elongation_rate = 0.1;
-
2515 shoot_parameters_mainstem.girth_area_factor = 20.f;
-
2516 shoot_parameters_mainstem.gravitropic_curvature = 10;
-
2517 shoot_parameters_mainstem.internode_length_max = 0.001;
-
2518 shoot_parameters_mainstem.internode_length_decay_rate = 0;
-
2519 shoot_parameters_mainstem.flowers_require_dormancy = false;
-
2520 shoot_parameters_mainstem.growth_requires_dormancy = false;
-
2521 shoot_parameters_mainstem.flower_bud_break_probability = 0.0;
-
2522 shoot_parameters_mainstem.max_nodes = 30;
-
2523
-
2524 defineShootType("mainstem",shoot_parameters_mainstem);
+
2307 ShootParameters shoot_parameters_unifoliate = shoot_parameters_trifoliate;
+
2308 shoot_parameters_unifoliate.phytomer_parameters = phytomer_parameters_unifoliate;
+
2309 shoot_parameters_unifoliate.max_nodes = 1;
+
2310 shoot_parameters_unifoliate.flower_bud_break_probability = 0;
+
2311 shoot_parameters_unifoliate.insertion_angle_tip = 0;
+
2312 shoot_parameters_unifoliate.insertion_angle_decay_rate = 0;
+
2313 shoot_parameters_unifoliate.vegetative_bud_break_time = 8;
+
2314 shoot_parameters_unifoliate.defineChildShootTypes({"trifoliate"},{1.0});
+
2315
+
2316 defineShootType("unifoliate",shoot_parameters_unifoliate);
+
2317 defineShootType("trifoliate",shoot_parameters_trifoliate);
+
2318
+
2319}
+
2320
+
2321uint PlantArchitecture::buildSoybeanPlant(const helios::vec3 &base_position) {
+
2322
+
2323 if (shoot_types.empty()) {
+
2324 //automatically initialize bean plant shoots
+
2325 initializeSoybeanShoots();
+
2326 }
+
2327
+
2328 uint plantID = addPlantInstance(base_position, 0);
+
2329
+
2330 AxisRotation base_rotation = make_AxisRotation(context_ptr->randu(0.f, 0.05f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI));
+
2331 uint uID_unifoliate = addBaseStemShoot(plantID, 1, base_rotation, 0.0005, 0.04, 0.01, 0.01, 0, "unifoliate");
+
2332
+
2333 appendShoot(plantID, uID_unifoliate, 1, make_AxisRotation(0, 0, 0.5f * M_PI), shoot_types.at("trifoliate").phytomer_parameters.internode.radius_initial.val(), shoot_types.at("trifoliate").internode_length_max.val(), 0.1, 0.1, 0, "trifoliate");
+
2334
+
2335 breakPlantDormancy(plantID);
+
2336
+
2337 setPlantPhenologicalThresholds(plantID, 0, 40, 5, 5, 30, 1000, false);
+
2338
+
2339 plant_instances.at(plantID).max_age = 365;
+
2340
+
2341 return plantID;
+
2342
+
2343}
+
2344
+
2345void PlantArchitecture::initializeStrawberryShoots() {
+
2346
+
2347 // ---- Leaf Prototype ---- //
+
2348
+
2349 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2350 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/StrawberryLeaf.png";
+
2351 leaf_prototype.leaf_aspect_ratio = 1.f;
+
2352 leaf_prototype.midrib_fold_fraction = 0.2f;
+
2353 leaf_prototype.longitudinal_curvature = 0.15f;
+
2354 leaf_prototype.lateral_curvature = 0.4f;
+
2355 leaf_prototype.wave_period = 0.3f;
+
2356 leaf_prototype.wave_amplitude = 0.01f;
+
2357 leaf_prototype.subdivisions = 6;
+
2358 leaf_prototype.unique_prototypes = 10;
+
2359
+
2360 // ---- Phytomer Parameters ---- //
+
2361
+
2362 PhytomerParameters phytomer_parameters(context_ptr->getRandomGenerator());
+
2363
+
2364 phytomer_parameters.internode.pitch = 10;
+
2365 phytomer_parameters.internode.phyllotactic_angle.uniformDistribution(80,100);
+
2366 phytomer_parameters.internode.radius_initial = 0.001;
+
2367 phytomer_parameters.internode.color = make_RGBcolor(0.38, 0.48, 0.1);
+
2368 phytomer_parameters.internode.length_segments = 1;
+
2369
+
2370 phytomer_parameters.petiole.petioles_per_internode = 1;
+
2371 phytomer_parameters.petiole.pitch.uniformDistribution(0,45);
+
2372 phytomer_parameters.petiole.radius = 0.0025;
+
2373 phytomer_parameters.petiole.length.uniformDistribution(0.15,0.25);
+
2374 phytomer_parameters.petiole.taper = 0.5;
+
2375 phytomer_parameters.petiole.curvature.uniformDistribution(-300,100);
+
2376 phytomer_parameters.petiole.color = make_RGBcolor(0.24, 0.28, 0.08);
+
2377 phytomer_parameters.petiole.length_segments = 5;
+
2378
+
2379 phytomer_parameters.leaf.leaves_per_petiole = 3;
+
2380 phytomer_parameters.leaf.pitch.uniformDistribution(-30,10);
+
2381 phytomer_parameters.leaf.yaw = 20;
+
2382 phytomer_parameters.leaf.roll = -30;
+
2383 phytomer_parameters.leaf.leaflet_offset = 0.01;
+
2384 phytomer_parameters.leaf.leaflet_scale = 1.0;
+
2385 phytomer_parameters.leaf.prototype_scale = 0.1;
+
2386 phytomer_parameters.leaf.prototype = leaf_prototype;
+
2387
+
2388 phytomer_parameters.peduncle.length = 0.17;
+
2389 phytomer_parameters.peduncle.radius = 0.00075;
+
2390 phytomer_parameters.peduncle.pitch = 35;
+
2391 phytomer_parameters.peduncle.roll = 0;
+
2392 phytomer_parameters.peduncle.curvature = -200;
+
2393 phytomer_parameters.peduncle.length_segments = 5;
+
2394 phytomer_parameters.peduncle.radial_subdivisions = 6;
+
2395 phytomer_parameters.peduncle.color = phytomer_parameters.petiole.color;
+
2396
+
2397 phytomer_parameters.inflorescence.flowers_per_peduncle.uniformDistribution(1, 3);
+
2398 phytomer_parameters.inflorescence.flower_offset = 0.2;
+
2399 phytomer_parameters.inflorescence.pitch = 70;
+
2400 phytomer_parameters.inflorescence.roll = 90;
+
2401 phytomer_parameters.inflorescence.flower_prototype_scale = 0.04;
+
2402 phytomer_parameters.inflorescence.flower_prototype_function = StrawberryFlowerPrototype;
+
2403 phytomer_parameters.inflorescence.fruit_prototype_scale = 0.06;
+
2404 phytomer_parameters.inflorescence.fruit_prototype_function = StrawberryFruitPrototype;
+
2405 phytomer_parameters.inflorescence.fruit_gravity_factor_fraction = 0.65;
+
2406
+
2407 // ---- Shoot Parameters ---- //
+
2408
+
2409 ShootParameters shoot_parameters(context_ptr->getRandomGenerator());
+
2410 shoot_parameters.phytomer_parameters = phytomer_parameters;
+
2411
+
2412 shoot_parameters.max_nodes = 15;
+
2413 shoot_parameters.insertion_angle_tip = 40;
+
2414 shoot_parameters.insertion_angle_decay_rate = 0;
+
2415 shoot_parameters.internode_length_max = 0.015;
+
2416 shoot_parameters.internode_length_decay_rate = 0;
+
2417 shoot_parameters.internode_length_min = 0.0;
+
2418 shoot_parameters.base_roll = 90;
+
2419 shoot_parameters.base_yaw.uniformDistribution(-20,20);
+
2420 shoot_parameters.gravitropic_curvature.uniformDistribution(-10,0);
+
2421 shoot_parameters.tortuosity = 0;
+
2422
+
2423 shoot_parameters.phyllochron_min = 2;
+
2424 shoot_parameters.elongation_rate = 0.1;
+
2425 shoot_parameters.girth_area_factor = 2.f;
+
2426 shoot_parameters.vegetative_bud_break_time = 15;
+
2427 shoot_parameters.vegetative_bud_break_probability_min = 0.1;
+
2428 shoot_parameters.vegetative_bud_break_probability_decay_rate = -0.4;
+
2429 shoot_parameters.flower_bud_break_probability = 1;
+
2430 shoot_parameters.fruit_set_probability = 0.5;
+
2431 shoot_parameters.flowers_require_dormancy = false;
+
2432 shoot_parameters.growth_requires_dormancy = false;
+
2433 shoot_parameters.determinate_shoot_growth = true;
+
2434
+
2435 shoot_parameters.defineChildShootTypes({"mainstem"},{1.0});
+
2436
+
2437 defineShootType("mainstem",shoot_parameters);
+
2438
+
2439}
+
2440
+
2441uint PlantArchitecture::buildStrawberryPlant(const helios::vec3 &base_position) {
+
2442
+
2443 if (shoot_types.empty()) {
+
2444 //automatically initialize strawberry plant shoots
+
2445 initializeStrawberryShoots();
+
2446 }
+
2447
+
2448 uint plantID = addPlantInstance(base_position, 0);
+
2449
+
2450 AxisRotation base_rotation = make_AxisRotation(0, context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI));
+
2451 uint uID_stem = addBaseStemShoot(plantID, 1, base_rotation, 0.001, 0.004, 0.01, 0.01, 0, "mainstem");
+
2452
+
2453 breakPlantDormancy(plantID);
+
2454
+
2455 setPlantPhenologicalThresholds(plantID, 0, 40, 5, 5, 30, 100, false);
+
2456
+
2457 plant_instances.at(plantID).max_age = 365;
+
2458
+
2459 return plantID;
+
2460
+
2461}
+
2462
+
2463void PlantArchitecture::initializeSugarbeetShoots() {
+
2464
+
2465 // ---- Leaf Prototype ---- //
+
2466
+
2467 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2468 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SugarbeetLeaf.png";
+
2469 leaf_prototype.leaf_aspect_ratio = 0.4f;
+
2470 leaf_prototype.midrib_fold_fraction = 0.1f;
+
2471 leaf_prototype.longitudinal_curvature = -0.2f;
+
2472 leaf_prototype.lateral_curvature = -0.4f;
+
2473 leaf_prototype.petiole_roll = 0.75f;
+
2474 leaf_prototype.wave_period.uniformDistribution( 0.08f, 0.15f);
+
2475 leaf_prototype.wave_amplitude.uniformDistribution(0.02, 0.04);
+
2476 leaf_prototype.subdivisions = 20;;
+
2477 leaf_prototype.unique_prototypes = 10;
+
2478
+
2479 // ---- Phytomer Parameters ---- //
+
2480
+
2481 PhytomerParameters phytomer_parameters_sugarbeet(context_ptr->getRandomGenerator());
+
2482
+
2483 phytomer_parameters_sugarbeet.internode.pitch = 0;
+
2484 phytomer_parameters_sugarbeet.internode.phyllotactic_angle = 137.5;
+
2485 phytomer_parameters_sugarbeet.internode.radius_initial = 0.005;
+
2486 phytomer_parameters_sugarbeet.internode.color = make_RGBcolor(0.44,0.58,0.19);
+
2487 phytomer_parameters_sugarbeet.internode.length_segments = 1;
+
2488 phytomer_parameters_sugarbeet.internode.max_vegetative_buds_per_petiole = 0;
+
2489 phytomer_parameters_sugarbeet.internode.max_floral_buds_per_petiole = 0;
+
2490
+
2491 phytomer_parameters_sugarbeet.petiole.petioles_per_internode = 1;
+
2492 phytomer_parameters_sugarbeet.petiole.pitch.uniformDistribution(0,40);
+
2493 phytomer_parameters_sugarbeet.petiole.radius = 0.005;
+
2494 phytomer_parameters_sugarbeet.petiole.length.uniformDistribution(0.15,0.2);
+
2495 phytomer_parameters_sugarbeet.petiole.taper = 0.6;
+
2496 phytomer_parameters_sugarbeet.petiole.curvature.uniformDistribution(-300,100);
+
2497 phytomer_parameters_sugarbeet.petiole.color = phytomer_parameters_sugarbeet.internode.color;
+
2498 phytomer_parameters_sugarbeet.petiole.length_segments = 8;
+
2499
+
2500 phytomer_parameters_sugarbeet.leaf.leaves_per_petiole = 1;
+
2501 phytomer_parameters_sugarbeet.leaf.pitch.uniformDistribution(-10,0);
+
2502 phytomer_parameters_sugarbeet.leaf.yaw.uniformDistribution(-5,5);
+
2503 phytomer_parameters_sugarbeet.leaf.roll.uniformDistribution(-15,15);
+
2504 phytomer_parameters_sugarbeet.leaf.prototype_scale.uniformDistribution(0.15,0.25);
+
2505 phytomer_parameters_sugarbeet.leaf.prototype = leaf_prototype;
+
2506
+
2507 // ---- Shoot Parameters ---- //
+
2508
+
2509 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
+
2510 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_sugarbeet;
+
2511 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
+
2512 shoot_parameters_mainstem.phyllochron_min = 2;
+
2513 shoot_parameters_mainstem.elongation_rate = 0.1;
+
2514 shoot_parameters_mainstem.girth_area_factor = 20.f;
+
2515 shoot_parameters_mainstem.gravitropic_curvature = 10;
+
2516 shoot_parameters_mainstem.internode_length_max = 0.001;
+
2517 shoot_parameters_mainstem.internode_length_decay_rate = 0;
+
2518 shoot_parameters_mainstem.flowers_require_dormancy = false;
+
2519 shoot_parameters_mainstem.growth_requires_dormancy = false;
+
2520 shoot_parameters_mainstem.flower_bud_break_probability = 0.0;
+
2521 shoot_parameters_mainstem.max_nodes = 30;
+
2522
+
2523 defineShootType("mainstem",shoot_parameters_mainstem);
+
2524
2525
-
2526
-
2527}
-
2528
-
2529uint PlantArchitecture::buildSugarbeetPlant(const helios::vec3 &base_position) {
-
2530
-
2531 if (shoot_types.empty()) {
-
2532 //automatically initialize sugarbeet plant shoots
-
2533 initializeSugarbeetShoots();
-
2534 }
-
2535
-
2536 uint plantID = addPlantInstance(base_position, 0);
-
2537
-
2538 uint uID_stem = addBaseStemShoot(plantID, 3, make_AxisRotation(context_ptr->randu(0.f, 0.01f * M_PI), 0.f * context_ptr->randu(0.f, 2.f * M_PI), 0.25f * M_PI), 0.005, 0.001, 1, 1, 0, "mainstem");
-
2539
-
2540 breakPlantDormancy(plantID);
-
2541
-
2542 setPlantPhenologicalThresholds(plantID, 0, -1, -1, -1, -1, 1000, false);
-
2543
-
2544 plant_instances.at(plantID).max_age = 365;
-
2545
-
2546 return plantID;
-
2547
-
2548}
-
2549
-
2550void PlantArchitecture::initializeTomatoShoots() {
-
2551
-
2552 // ---- Leaf Prototype ---- //
-
2553
-
2554 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2555 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/TomatoLeaf_centered.png";
-
2556 leaf_prototype.leaf_aspect_ratio = 0.5f;
-
2557 leaf_prototype.midrib_fold_fraction = 0.1f;
-
2558 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.45, -0.2f);
-
2559 leaf_prototype.lateral_curvature = -0.3f;
-
2560 leaf_prototype.wave_period = 0.35f;
-
2561 leaf_prototype.wave_amplitude = 0.08f;
-
2562 leaf_prototype.subdivisions = 6;
-
2563 leaf_prototype.unique_prototypes = 5;
-
2564
-
2565 // ---- Phytomer Parameters ---- //
-
2566
-
2567 PhytomerParameters phytomer_parameters(context_ptr->getRandomGenerator());
-
2568
-
2569 phytomer_parameters.internode.pitch = 10;
-
2570 phytomer_parameters.internode.phyllotactic_angle.uniformDistribution(145, 215);
-
2571 phytomer_parameters.internode.radius_initial = 0.001;
-
2572 phytomer_parameters.internode.color = make_RGBcolor(0.213, 0.270, 0.056);
-
2573 phytomer_parameters.internode.length_segments = 1;
-
2574
-
2575 phytomer_parameters.petiole.petioles_per_internode = 1;
-
2576 phytomer_parameters.petiole.pitch.uniformDistribution(45,60);
-
2577 phytomer_parameters.petiole.radius = 0.002;
-
2578 phytomer_parameters.petiole.length = 0.2;
-
2579 phytomer_parameters.petiole.taper = 0.15;
-
2580 phytomer_parameters.petiole.curvature.uniformDistribution(-150,-50);
-
2581 phytomer_parameters.petiole.color = phytomer_parameters.internode.color;
-
2582 phytomer_parameters.petiole.length_segments = 5;
-
2583
-
2584 phytomer_parameters.leaf.leaves_per_petiole = 7;
-
2585 phytomer_parameters.leaf.pitch.uniformDistribution(-30, 5);
-
2586 phytomer_parameters.leaf.yaw = 10;
-
2587 phytomer_parameters.leaf.roll = 0;
-
2588 phytomer_parameters.leaf.leaflet_offset = 0.15;
-
2589 phytomer_parameters.leaf.leaflet_scale = 0.7;
-
2590 phytomer_parameters.leaf.prototype_scale.uniformDistribution(0.12,0.18);
-
2591 phytomer_parameters.leaf.prototype = leaf_prototype;
-
2592
-
2593 phytomer_parameters.peduncle.length = 0.16;
-
2594 phytomer_parameters.peduncle.radius = 0.0015;
-
2595 phytomer_parameters.peduncle.pitch = 20;
-
2596 phytomer_parameters.peduncle.roll = 0;
-
2597 phytomer_parameters.peduncle.curvature = -700;
-
2598 phytomer_parameters.peduncle.color = phytomer_parameters.internode.color;
-
2599 phytomer_parameters.peduncle.length_segments = 5;
-
2600 phytomer_parameters.peduncle.radial_subdivisions = 8;
-
2601
-
2602 phytomer_parameters.inflorescence.flowers_per_peduncle = 8;
-
2603 phytomer_parameters.inflorescence.flower_offset = 0.15;
-
2604 phytomer_parameters.inflorescence.pitch = 90;
-
2605 phytomer_parameters.inflorescence.roll.uniformDistribution(-30,30);
-
2606 phytomer_parameters.inflorescence.flower_prototype_scale = 0.03;
-
2607 phytomer_parameters.inflorescence.flower_prototype_function = TomatoFlowerPrototype;
-
2608 phytomer_parameters.inflorescence.fruit_prototype_scale = 0.08;
-
2609 phytomer_parameters.inflorescence.fruit_prototype_function = TomatoFruitPrototype;
-
2610 phytomer_parameters.inflorescence.fruit_gravity_factor_fraction = 0.5;
-
2611
-
2612 // ---- Shoot Parameters ---- //
-
2613
-
2614 ShootParameters shoot_parameters(context_ptr->getRandomGenerator());
-
2615 shoot_parameters.phytomer_parameters = phytomer_parameters;
-
2616 shoot_parameters.phytomer_parameters.phytomer_creation_function = TomatoPhytomerCreationFunction;
-
2617
-
2618 shoot_parameters.max_nodes = 16;
-
2619 shoot_parameters.insertion_angle_tip = 30;
-
2620 shoot_parameters.insertion_angle_decay_rate = 0;
-
2621 shoot_parameters.internode_length_max = 0.04;
-
2622 shoot_parameters.internode_length_min = 0.0;
-
2623 shoot_parameters.internode_length_decay_rate = 0;
-
2624 shoot_parameters.base_roll = 90;
-
2625 shoot_parameters.base_yaw.uniformDistribution(-20,20);
-
2626 shoot_parameters.gravitropic_curvature = -200;
-
2627 shoot_parameters.tortuosity = 3;
-
2628
-
2629 shoot_parameters.phyllochron_min = 2;
-
2630 shoot_parameters.elongation_rate = 0.1;
-
2631 shoot_parameters.girth_area_factor = 3.f;
-
2632 shoot_parameters.vegetative_bud_break_time = 10;
-
2633 shoot_parameters.vegetative_bud_break_probability_min = 0.15;
-
2634 shoot_parameters.vegetative_bud_break_probability_decay_rate = -0.5;
-
2635 shoot_parameters.flower_bud_break_probability = 0.5;
-
2636 shoot_parameters.fruit_set_probability = 0.5;
-
2637 shoot_parameters.flowers_require_dormancy = false;
-
2638 shoot_parameters.growth_requires_dormancy = false;
-
2639 shoot_parameters.determinate_shoot_growth = true;
-
2640
-
2641 shoot_parameters.defineChildShootTypes({"mainstem"},{1.0});
-
2642
-
2643 defineShootType("mainstem",shoot_parameters);
-
2644
-
2645}
-
2646
-
2647uint PlantArchitecture::buildTomatoPlant(const helios::vec3 &base_position) {
-
2648
-
2649 if (shoot_types.empty()) {
-
2650 //automatically initialize tomato plant shoots
-
2651 initializeTomatoShoots();
-
2652 }
-
2653
-
2654 uint plantID = addPlantInstance(base_position, 0);
-
2655
-
2656 AxisRotation base_rotation = make_AxisRotation(0, context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI));
-
2657 uint uID_stem = addBaseStemShoot(plantID, 1, base_rotation, 0.002, 0.06, 0.01, 0.01, 0, "mainstem");
-
2658
-
2659 breakPlantDormancy(plantID);
-
2660
-
2661 setPlantPhenologicalThresholds(plantID, 0, 40, 5, 5, 30, 1000, false);
-
2662
-
2663 plant_instances.at(plantID).max_age = 365;
-
2664
-
2665 return plantID;
-
2666
-
2667}
-
2668
-
2669void PlantArchitecture::initializeWalnutTreeShoots(){
-
2670
-
2671 // ---- Leaf Prototype ---- //
-
2672
-
2673 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2674 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/WalnutLeaf.png";
-
2675 leaf_prototype.leaf_aspect_ratio = 0.5f;
-
2676 leaf_prototype.midrib_fold_fraction = 0.15f;
-
2677 leaf_prototype.longitudinal_curvature = -0.2f;
-
2678 leaf_prototype.lateral_curvature = 0.1f;
-
2679 leaf_prototype.wave_period.uniformDistribution(0.08, 0.15);
-
2680 leaf_prototype.wave_amplitude.uniformDistribution(0.02, 0.04);
-
2681 leaf_prototype.subdivisions = 3;
-
2682 leaf_prototype.unique_prototypes = 5;
-
2683
-
2684 // ---- Phytomer Parameters ---- //
-
2685
-
2686 PhytomerParameters phytomer_parameters_walnut(context_ptr->getRandomGenerator());
-
2687
-
2688 phytomer_parameters_walnut.internode.pitch = 0;
-
2689 phytomer_parameters_walnut.internode.phyllotactic_angle.uniformDistribution( 160, 200 );
-
2690 phytomer_parameters_walnut.internode.radius_initial = 0.004;
-
2691 phytomer_parameters_walnut.internode.length_segments = 1;
-
2692 phytomer_parameters_walnut.internode.image_texture = "plugins/plantarchitecture/assets/textures/AppleBark.jpg";
-
2693 phytomer_parameters_walnut.internode.max_floral_buds_per_petiole = 3;
-
2694
-
2695 phytomer_parameters_walnut.petiole.petioles_per_internode = 2;
-
2696 phytomer_parameters_walnut.petiole.pitch.uniformDistribution(-80,-70);
-
2697 phytomer_parameters_walnut.petiole.taper = 0.2;
-
2698 phytomer_parameters_walnut.petiole.curvature.uniformDistribution(-1000,0);
-
2699 phytomer_parameters_walnut.petiole.length = 0.15;
-
2700 phytomer_parameters_walnut.petiole.radius = 0.0015;
-
2701 phytomer_parameters_walnut.petiole.length_segments = 5;
-
2702 phytomer_parameters_walnut.petiole.radial_subdivisions = 3;
-
2703 phytomer_parameters_walnut.petiole.color = make_RGBcolor(0.61,0.5,0.24);
-
2704
-
2705 phytomer_parameters_walnut.leaf.leaves_per_petiole = 5;
-
2706 phytomer_parameters_walnut.leaf.pitch.uniformDistribution(-40,0);
-
2707 phytomer_parameters_walnut.leaf.prototype_scale = 0.14;
-
2708 phytomer_parameters_walnut.leaf.leaflet_scale = 0.7;
-
2709 phytomer_parameters_walnut.leaf.leaflet_offset = 0.35;
-
2710 phytomer_parameters_walnut.leaf.prototype = leaf_prototype;
-
2711
-
2712 phytomer_parameters_walnut.peduncle.length = 0.02;
-
2713 phytomer_parameters_walnut.peduncle.radius = 0.0005;
-
2714 phytomer_parameters_walnut.peduncle.pitch = 90;
-
2715 phytomer_parameters_walnut.peduncle.roll = 90;
-
2716 phytomer_parameters_walnut.peduncle.length_segments = 1;
-
2717
-
2718 phytomer_parameters_walnut.inflorescence.flowers_per_peduncle = 1;
-
2719 phytomer_parameters_walnut.inflorescence.pitch = 0;
-
2720 phytomer_parameters_walnut.inflorescence.roll = 0;
-
2721 phytomer_parameters_walnut.inflorescence.flower_prototype_scale = 0.03;
-
2722 phytomer_parameters_walnut.inflorescence.flower_prototype_function = WalnutFlowerPrototype;
-
2723 phytomer_parameters_walnut.inflorescence.fruit_prototype_scale = 0.075;
-
2724 phytomer_parameters_walnut.inflorescence.fruit_prototype_function = WalnutFruitPrototype;
-
2725
-
2726 // ---- Shoot Parameters ---- //
-
2727
-
2728 // Trunk
-
2729 ShootParameters shoot_parameters_trunk(context_ptr->getRandomGenerator());
-
2730 shoot_parameters_trunk.phytomer_parameters = phytomer_parameters_walnut;
-
2731 shoot_parameters_trunk.phytomer_parameters.internode.phyllotactic_angle = 0;
-
2732 shoot_parameters_trunk.phytomer_parameters.internode.radius_initial = 0.01;
-
2733 shoot_parameters_trunk.phytomer_parameters.internode.radial_subdivisions = 24;
-
2734 shoot_parameters_trunk.max_nodes = 20;
-
2735 shoot_parameters_trunk.girth_area_factor = 3.f;
-
2736 shoot_parameters_trunk.vegetative_bud_break_probability_min = 0;
-
2737 shoot_parameters_trunk.vegetative_bud_break_time = 0;
-
2738 shoot_parameters_trunk.tortuosity = 1;
-
2739 shoot_parameters_trunk.internode_length_max = 0.05;
-
2740 shoot_parameters_trunk.internode_length_decay_rate = 0;
-
2741 shoot_parameters_trunk.defineChildShootTypes({"scaffold"},{1});
-
2742
-
2743 // Proleptic shoots
-
2744 ShootParameters shoot_parameters_proleptic(context_ptr->getRandomGenerator());
-
2745 shoot_parameters_proleptic.phytomer_parameters = phytomer_parameters_walnut;
-
2746 shoot_parameters_proleptic.phytomer_parameters.internode.color = make_RGBcolor(0.3,0.2,0.2);
-
2747 shoot_parameters_proleptic.phytomer_parameters.phytomer_creation_function = WalnutPhytomerCreationFunction;
-
2748 // shoot_parameters_proleptic.phytomer_parameters.phytomer_callback_function = WalnutPhytomerCallbackFunction;
-
2749 shoot_parameters_proleptic.max_nodes = 30;
-
2750 shoot_parameters_proleptic.max_nodes_per_season = 15;
-
2751 shoot_parameters_proleptic.phyllochron_min = 2.;
-
2752 shoot_parameters_proleptic.elongation_rate = 0.15;
-
2753 shoot_parameters_proleptic.girth_area_factor = 10.f;
-
2754 shoot_parameters_proleptic.vegetative_bud_break_probability_min = 0.05;
-
2755 shoot_parameters_proleptic.vegetative_bud_break_probability_decay_rate = 0.6;
-
2756 shoot_parameters_proleptic.vegetative_bud_break_time = 3;
-
2757 shoot_parameters_proleptic.gravitropic_curvature = 200;
-
2758 shoot_parameters_proleptic.tortuosity = 5;
-
2759 shoot_parameters_proleptic.insertion_angle_tip.uniformDistribution( 20, 25);
-
2760 shoot_parameters_proleptic.insertion_angle_decay_rate = 15;
-
2761 shoot_parameters_proleptic.internode_length_max = 0.08;
-
2762 shoot_parameters_proleptic.internode_length_min = 0.01;
-
2763 shoot_parameters_proleptic.internode_length_decay_rate = 0.006;
-
2764 shoot_parameters_proleptic.fruit_set_probability = 0.5;
-
2765 shoot_parameters_proleptic.flower_bud_break_probability = 0.3;
-
2766 shoot_parameters_proleptic.max_terminal_floral_buds = 4;
-
2767 shoot_parameters_proleptic.flowers_require_dormancy = true;
-
2768 shoot_parameters_proleptic.growth_requires_dormancy = true;
-
2769 shoot_parameters_proleptic.determinate_shoot_growth = false;
-
2770 shoot_parameters_proleptic.defineChildShootTypes({"proleptic"},{1.0});
-
2771
-
2772 // Main scaffolds
-
2773 ShootParameters shoot_parameters_scaffold = shoot_parameters_proleptic;
-
2774 shoot_parameters_scaffold.phytomer_parameters.internode.radial_subdivisions = 10;
-
2775 shoot_parameters_scaffold.max_nodes = 30;
-
2776 shoot_parameters_scaffold.gravitropic_curvature = 300;
-
2777 shoot_parameters_scaffold.internode_length_max = 0.06;
-
2778 shoot_parameters_scaffold.tortuosity = 4;
-
2779 shoot_parameters_scaffold.defineChildShootTypes({"proleptic"},{1.0});
-
2780
-
2781 defineShootType("trunk", shoot_parameters_trunk);
-
2782 defineShootType("scaffold", shoot_parameters_scaffold);
-
2783 defineShootType("proleptic", shoot_parameters_proleptic);
-
2784
-
2785}
-
2786
-
2787uint PlantArchitecture::buildWalnutTree(const helios::vec3 &base_position) {
-
2788
-
2789 if( shoot_types.empty() ){
-
2790 //automatically initialize walnut tree shoots
-
2791 initializeWalnutTreeShoots();
-
2792 }
-
2793
-
2794 uint plantID = addPlantInstance(base_position, 0);
-
2795
-
2796 uint uID_trunk = addBaseStemShoot(plantID, 19, make_AxisRotation(context_ptr->randu(0.f, 0.05f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), 0.f * M_PI), shoot_types.at("trunk").phytomer_parameters.internode.radius_initial.val(), 0.04, 1.f, 1.f, 0, "trunk");
-
2797 appendPhytomerToShoot( plantID, uID_trunk, shoot_types.at("trunk").phytomer_parameters, 0, 0.01, 1, 1);
-
2798
-
2799 plant_instances.at(plantID).shoot_tree.at(uID_trunk)->meristem_is_alive = false;
-
2800
-
2801 auto phytomers = plant_instances.at(plantID).shoot_tree.at(uID_trunk)->phytomers;
-
2802 for( const auto & phytomer : phytomers ){
-
2803 phytomer->removeLeaf();
-
2804 phytomer->setVegetativeBudState(BUD_DEAD);
-
2805 phytomer->setFloralBudState(BUD_DEAD);
-
2806 }
-
2807
-
2808 uint Nscaffolds = 4;//context_ptr->randu(4,5);
-
2809
-
2810 for( int i=0; i<Nscaffolds; i++ ) {
-
2811// float pitch = context_ptr->randu(deg2rad(25), deg2rad(35))+i*deg2rad(7.f);
-
2812 float pitch = context_ptr->randu(deg2rad(45), deg2rad(55));
-
2813 uint uID_shoot = addChildShoot( plantID, uID_trunk, getShootNodeCount(plantID,uID_trunk)-i-1, context_ptr->randu(7, 9), make_AxisRotation(pitch, (float(i) + context_ptr->randu(-0.2f, 0.2f)) / float(Nscaffolds) * 2 * M_PI, 0), 0.007, 0.06, 1.f, 1.f, 0.5, "scaffold", 0);
-
2814
-
2815 }
-
2816
-
2817 makePlantDormant(plantID);
-
2818
-
2819 setPlantPhenologicalThresholds(plantID, 165, -1, 3, 7, 20, 200, false);
-
2820
-
2821 plant_instances.at(plantID).max_age = 1095;
-
2822
-
2823 return plantID;
-
2824
-
2825}
-
2826
-
2827void PlantArchitecture::initializeWheatShoots() {
-
2828
-
2829 // ---- Leaf Prototype ---- //
-
2830
-
2831 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
-
2832 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SorghumLeaf.png";
-
2833 leaf_prototype.leaf_aspect_ratio = 0.1f;
-
2834 leaf_prototype.midrib_fold_fraction = 0.3f;
-
2835 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.5, -0.1);
-
2836 leaf_prototype.lateral_curvature = -0.3;
-
2837 leaf_prototype.petiole_roll = 0.04f;
-
2838 leaf_prototype.wave_period = 0.1f;
-
2839 leaf_prototype.wave_amplitude = 0.1f;
-
2840 leaf_prototype.leaf_buckle_length.uniformDistribution(0.5,0.6);
-
2841 leaf_prototype.leaf_buckle_angle.uniformDistribution(25,35);
-
2842 leaf_prototype.subdivisions = 20;
-
2843 leaf_prototype.unique_prototypes = 10;
-
2844
-
2845 // ---- Phytomer Parameters ---- //
-
2846
-
2847 PhytomerParameters phytomer_parameters_wheat(context_ptr->getRandomGenerator());
-
2848
-
2849 phytomer_parameters_wheat.internode.pitch = 0;
-
2850 phytomer_parameters_wheat.internode.phyllotactic_angle.uniformDistribution(67,77);
-
2851 phytomer_parameters_wheat.internode.radius_initial = 0.001;
-
2852 phytomer_parameters_wheat.internode.color = make_RGBcolor(0.27,0.31,0.16);
-
2853 phytomer_parameters_wheat.internode.length_segments = 1;
-
2854 phytomer_parameters_wheat.internode.radial_subdivisions = 6;
-
2855 phytomer_parameters_wheat.internode.max_floral_buds_per_petiole = 0;
-
2856 phytomer_parameters_wheat.internode.max_vegetative_buds_per_petiole = 0;
-
2857
-
2858 phytomer_parameters_wheat.petiole.petioles_per_internode = 1;
-
2859 phytomer_parameters_wheat.petiole.pitch.uniformDistribution(-40,-20);
-
2860 phytomer_parameters_wheat.petiole.radius = 0.0;
-
2861 phytomer_parameters_wheat.petiole.length = 0.005;
-
2862 phytomer_parameters_wheat.petiole.taper = 0;
-
2863 phytomer_parameters_wheat.petiole.curvature = 0;
-
2864 phytomer_parameters_wheat.petiole.length_segments = 1;
-
2865
-
2866 phytomer_parameters_wheat.leaf.leaves_per_petiole = 1;
-
2867 phytomer_parameters_wheat.leaf.pitch = 0;
-
2868 phytomer_parameters_wheat.leaf.yaw = 0;
-
2869 phytomer_parameters_wheat.leaf.roll = 0;
-
2870 phytomer_parameters_wheat.leaf.prototype_scale = 0.22;
-
2871 phytomer_parameters_wheat.leaf.prototype = leaf_prototype;
-
2872
-
2873 phytomer_parameters_wheat.peduncle.length = 0.1;
-
2874 phytomer_parameters_wheat.peduncle.radius = 0.002;
-
2875 phytomer_parameters_wheat.peduncle.color = phytomer_parameters_wheat.internode.color;
-
2876 phytomer_parameters_wheat.peduncle.curvature = -100;
-
2877 phytomer_parameters_wheat.peduncle.radial_subdivisions = 6;
-
2878
-
2879 phytomer_parameters_wheat.inflorescence.flowers_per_peduncle = 1;
-
2880 phytomer_parameters_wheat.inflorescence.pitch = 0;
-
2881 phytomer_parameters_wheat.inflorescence.roll = 0;
-
2882 phytomer_parameters_wheat.inflorescence.fruit_prototype_scale = 0.1;
-
2883 phytomer_parameters_wheat.inflorescence.fruit_prototype_function = WheatSpikePrototype;
-
2884
-
2885 phytomer_parameters_wheat.phytomer_creation_function = WheatPhytomerCreationFunction;
-
2886
-
2887 // ---- Shoot Parameters ---- //
-
2888
-
2889 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
-
2890 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_wheat;
-
2891 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
-
2892 shoot_parameters_mainstem.flower_bud_break_probability = 1;
-
2893 shoot_parameters_mainstem.phyllochron_min = 2;
-
2894 shoot_parameters_mainstem.elongation_rate = 0.1;
-
2895 shoot_parameters_mainstem.girth_area_factor = 6.f;
-
2896 shoot_parameters_mainstem.gravitropic_curvature.uniformDistribution(-500,-200);
-
2897 shoot_parameters_mainstem.flowers_require_dormancy = false;
-
2898 shoot_parameters_mainstem.growth_requires_dormancy = false;
-
2899 shoot_parameters_mainstem.determinate_shoot_growth = false;
-
2900 shoot_parameters_mainstem.fruit_set_probability = 1.0;
-
2901 shoot_parameters_mainstem.defineChildShootTypes({"mainstem"},{1.0});
-
2902 shoot_parameters_mainstem.max_nodes = 20;
-
2903 shoot_parameters_mainstem.max_terminal_floral_buds = 1;
-
2904
-
2905 defineShootType("mainstem",shoot_parameters_mainstem);
-
2906
-
2907}
-
2908
-
2909uint PlantArchitecture::buildWheatPlant(const helios::vec3 &base_position) {
-
2910
-
2911 if (shoot_types.empty()) {
-
2912 //automatically initialize wheat plant shoots
-
2913 initializeWheatShoots();
-
2914 }
-
2915
-
2916 uint plantID = addPlantInstance(base_position - make_vec3(0,0,0.025), 0);
-
2917
-
2918 uint uID_stem = addBaseStemShoot(plantID, 1, make_AxisRotation(context_ptr->randu(0.f, 0.05f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI)), 0.001, 0.025, 0.01, 0.01, 0, "mainstem");
-
2919
-
2920 breakPlantDormancy(plantID);
-
2921
-
2922 setPlantPhenologicalThresholds(plantID, 0, -1, -1, 4, 10, 1000, false);
-
2923
-
2924 plant_instances.at(plantID).max_age = 365;
-
2925
-
2926 return plantID;
-
2927
-
2928}
+
2526}
+
2527
+
2528uint PlantArchitecture::buildSugarbeetPlant(const helios::vec3 &base_position) {
+
2529
+
2530 if (shoot_types.empty()) {
+
2531 //automatically initialize sugarbeet plant shoots
+
2532 initializeSugarbeetShoots();
+
2533 }
+
2534
+
2535 uint plantID = addPlantInstance(base_position, 0);
+
2536
+
2537 uint uID_stem = addBaseStemShoot(plantID, 3, make_AxisRotation(context_ptr->randu(0.f, 0.01f * M_PI), 0.f * context_ptr->randu(0.f, 2.f * M_PI), 0.25f * M_PI), 0.005, 0.001, 1, 1, 0, "mainstem");
+
2538
+
2539 breakPlantDormancy(plantID);
+
2540
+
2541 setPlantPhenologicalThresholds(plantID, 0, -1, -1, -1, -1, 1000, false);
+
2542
+
2543 plant_instances.at(plantID).max_age = 365;
+
2544
+
2545 return plantID;
+
2546
+
2547}
+
2548
+
2549void PlantArchitecture::initializeTomatoShoots() {
+
2550
+
2551 // ---- Leaf Prototype ---- //
+
2552
+
2553 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2554 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/TomatoLeaf_centered.png";
+
2555 leaf_prototype.leaf_aspect_ratio = 0.5f;
+
2556 leaf_prototype.midrib_fold_fraction = 0.1f;
+
2557 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.45, -0.2f);
+
2558 leaf_prototype.lateral_curvature = -0.3f;
+
2559 leaf_prototype.wave_period = 0.35f;
+
2560 leaf_prototype.wave_amplitude = 0.08f;
+
2561 leaf_prototype.subdivisions = 6;
+
2562 leaf_prototype.unique_prototypes = 5;
+
2563
+
2564 // ---- Phytomer Parameters ---- //
+
2565
+
2566 PhytomerParameters phytomer_parameters(context_ptr->getRandomGenerator());
+
2567
+
2568 phytomer_parameters.internode.pitch = 10;
+
2569 phytomer_parameters.internode.phyllotactic_angle.uniformDistribution(145, 215);
+
2570 phytomer_parameters.internode.radius_initial = 0.001;
+
2571 phytomer_parameters.internode.color = make_RGBcolor(0.213, 0.270, 0.056);
+
2572 phytomer_parameters.internode.length_segments = 1;
+
2573
+
2574 phytomer_parameters.petiole.petioles_per_internode = 1;
+
2575 phytomer_parameters.petiole.pitch.uniformDistribution(45,60);
+
2576 phytomer_parameters.petiole.radius = 0.002;
+
2577 phytomer_parameters.petiole.length = 0.2;
+
2578 phytomer_parameters.petiole.taper = 0.15;
+
2579 phytomer_parameters.petiole.curvature.uniformDistribution(-150,-50);
+
2580 phytomer_parameters.petiole.color = phytomer_parameters.internode.color;
+
2581 phytomer_parameters.petiole.length_segments = 5;
+
2582
+
2583 phytomer_parameters.leaf.leaves_per_petiole = 7;
+
2584 phytomer_parameters.leaf.pitch.uniformDistribution(-30, 5);
+
2585 phytomer_parameters.leaf.yaw = 10;
+
2586 phytomer_parameters.leaf.roll = 0;
+
2587 phytomer_parameters.leaf.leaflet_offset = 0.15;
+
2588 phytomer_parameters.leaf.leaflet_scale = 0.7;
+
2589 phytomer_parameters.leaf.prototype_scale.uniformDistribution(0.12,0.18);
+
2590 phytomer_parameters.leaf.prototype = leaf_prototype;
+
2591
+
2592 phytomer_parameters.peduncle.length = 0.16;
+
2593 phytomer_parameters.peduncle.radius = 0.0015;
+
2594 phytomer_parameters.peduncle.pitch = 20;
+
2595 phytomer_parameters.peduncle.roll = 0;
+
2596 phytomer_parameters.peduncle.curvature = -700;
+
2597 phytomer_parameters.peduncle.color = phytomer_parameters.internode.color;
+
2598 phytomer_parameters.peduncle.length_segments = 5;
+
2599 phytomer_parameters.peduncle.radial_subdivisions = 8;
+
2600
+
2601 phytomer_parameters.inflorescence.flowers_per_peduncle = 8;
+
2602 phytomer_parameters.inflorescence.flower_offset = 0.15;
+
2603 phytomer_parameters.inflorescence.pitch = 90;
+
2604 phytomer_parameters.inflorescence.roll.uniformDistribution(-30,30);
+
2605 phytomer_parameters.inflorescence.flower_prototype_scale = 0.03;
+
2606 phytomer_parameters.inflorescence.flower_prototype_function = TomatoFlowerPrototype;
+
2607 phytomer_parameters.inflorescence.fruit_prototype_scale = 0.08;
+
2608 phytomer_parameters.inflorescence.fruit_prototype_function = TomatoFruitPrototype;
+
2609 phytomer_parameters.inflorescence.fruit_gravity_factor_fraction = 0.5;
+
2610
+
2611 // ---- Shoot Parameters ---- //
+
2612
+
2613 ShootParameters shoot_parameters(context_ptr->getRandomGenerator());
+
2614 shoot_parameters.phytomer_parameters = phytomer_parameters;
+
2615 shoot_parameters.phytomer_parameters.phytomer_creation_function = TomatoPhytomerCreationFunction;
+
2616
+
2617 shoot_parameters.max_nodes = 16;
+
2618 shoot_parameters.insertion_angle_tip = 30;
+
2619 shoot_parameters.insertion_angle_decay_rate = 0;
+
2620 shoot_parameters.internode_length_max = 0.04;
+
2621 shoot_parameters.internode_length_min = 0.0;
+
2622 shoot_parameters.internode_length_decay_rate = 0;
+
2623 shoot_parameters.base_roll = 90;
+
2624 shoot_parameters.base_yaw.uniformDistribution(-20,20);
+
2625 shoot_parameters.gravitropic_curvature = -200;
+
2626 shoot_parameters.tortuosity = 3;
+
2627
+
2628 shoot_parameters.phyllochron_min = 2;
+
2629 shoot_parameters.elongation_rate = 0.1;
+
2630 shoot_parameters.girth_area_factor = 3.f;
+
2631 shoot_parameters.vegetative_bud_break_time = 10;
+
2632 shoot_parameters.vegetative_bud_break_probability_min = 0.15;
+
2633 shoot_parameters.vegetative_bud_break_probability_decay_rate = -0.5;
+
2634 shoot_parameters.flower_bud_break_probability = 0.5;
+
2635 shoot_parameters.fruit_set_probability = 0.5;
+
2636 shoot_parameters.flowers_require_dormancy = false;
+
2637 shoot_parameters.growth_requires_dormancy = false;
+
2638 shoot_parameters.determinate_shoot_growth = true;
+
2639
+
2640 shoot_parameters.defineChildShootTypes({"mainstem"},{1.0});
+
2641
+
2642 defineShootType("mainstem",shoot_parameters);
+
2643
+
2644}
+
2645
+
2646uint PlantArchitecture::buildTomatoPlant(const helios::vec3 &base_position) {
+
2647
+
2648 if (shoot_types.empty()) {
+
2649 //automatically initialize tomato plant shoots
+
2650 initializeTomatoShoots();
+
2651 }
+
2652
+
2653 uint plantID = addPlantInstance(base_position, 0);
+
2654
+
2655 AxisRotation base_rotation = make_AxisRotation(0, context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI));
+
2656 uint uID_stem = addBaseStemShoot(plantID, 1, base_rotation, 0.002, 0.06, 0.01, 0.01, 0, "mainstem");
+
2657
+
2658 breakPlantDormancy(plantID);
+
2659
+
2660 setPlantPhenologicalThresholds(plantID, 0, 40, 5, 5, 30, 1000, false);
+
2661
+
2662 plant_instances.at(plantID).max_age = 365;
+
2663
+
2664 return plantID;
+
2665
+
2666}
+
2667
+
2668void PlantArchitecture::initializeWalnutTreeShoots(){
+
2669
+
2670 // ---- Leaf Prototype ---- //
+
2671
+
2672 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2673 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/WalnutLeaf.png";
+
2674 leaf_prototype.leaf_aspect_ratio = 0.5f;
+
2675 leaf_prototype.midrib_fold_fraction = 0.15f;
+
2676 leaf_prototype.longitudinal_curvature = -0.2f;
+
2677 leaf_prototype.lateral_curvature = 0.1f;
+
2678 leaf_prototype.wave_period.uniformDistribution(0.08, 0.15);
+
2679 leaf_prototype.wave_amplitude.uniformDistribution(0.02, 0.04);
+
2680 leaf_prototype.subdivisions = 3;
+
2681 leaf_prototype.unique_prototypes = 5;
+
2682
+
2683 // ---- Phytomer Parameters ---- //
+
2684
+
2685 PhytomerParameters phytomer_parameters_walnut(context_ptr->getRandomGenerator());
+
2686
+
2687 phytomer_parameters_walnut.internode.pitch = 0;
+
2688 phytomer_parameters_walnut.internode.phyllotactic_angle.uniformDistribution( 160, 200 );
+
2689 phytomer_parameters_walnut.internode.radius_initial = 0.004;
+
2690 phytomer_parameters_walnut.internode.length_segments = 1;
+
2691 phytomer_parameters_walnut.internode.image_texture = "plugins/plantarchitecture/assets/textures/AppleBark.jpg";
+
2692 phytomer_parameters_walnut.internode.max_floral_buds_per_petiole = 3;
+
2693
+
2694 phytomer_parameters_walnut.petiole.petioles_per_internode = 2;
+
2695 phytomer_parameters_walnut.petiole.pitch.uniformDistribution(-80,-70);
+
2696 phytomer_parameters_walnut.petiole.taper = 0.2;
+
2697 phytomer_parameters_walnut.petiole.curvature.uniformDistribution(-1000,0);
+
2698 phytomer_parameters_walnut.petiole.length = 0.15;
+
2699 phytomer_parameters_walnut.petiole.radius = 0.0015;
+
2700 phytomer_parameters_walnut.petiole.length_segments = 5;
+
2701 phytomer_parameters_walnut.petiole.radial_subdivisions = 3;
+
2702 phytomer_parameters_walnut.petiole.color = make_RGBcolor(0.61,0.5,0.24);
+
2703
+
2704 phytomer_parameters_walnut.leaf.leaves_per_petiole = 5;
+
2705 phytomer_parameters_walnut.leaf.pitch.uniformDistribution(-40,0);
+
2706 phytomer_parameters_walnut.leaf.prototype_scale = 0.14;
+
2707 phytomer_parameters_walnut.leaf.leaflet_scale = 0.7;
+
2708 phytomer_parameters_walnut.leaf.leaflet_offset = 0.35;
+
2709 phytomer_parameters_walnut.leaf.prototype = leaf_prototype;
+
2710
+
2711 phytomer_parameters_walnut.peduncle.length = 0.02;
+
2712 phytomer_parameters_walnut.peduncle.radius = 0.0005;
+
2713 phytomer_parameters_walnut.peduncle.pitch = 90;
+
2714 phytomer_parameters_walnut.peduncle.roll = 90;
+
2715 phytomer_parameters_walnut.peduncle.length_segments = 1;
+
2716
+
2717 phytomer_parameters_walnut.inflorescence.flowers_per_peduncle = 1;
+
2718 phytomer_parameters_walnut.inflorescence.pitch = 0;
+
2719 phytomer_parameters_walnut.inflorescence.roll = 0;
+
2720 phytomer_parameters_walnut.inflorescence.flower_prototype_scale = 0.03;
+
2721 phytomer_parameters_walnut.inflorescence.flower_prototype_function = WalnutFlowerPrototype;
+
2722 phytomer_parameters_walnut.inflorescence.fruit_prototype_scale = 0.075;
+
2723 phytomer_parameters_walnut.inflorescence.fruit_prototype_function = WalnutFruitPrototype;
+
2724
+
2725 // ---- Shoot Parameters ---- //
+
2726
+
2727 // Trunk
+
2728 ShootParameters shoot_parameters_trunk(context_ptr->getRandomGenerator());
+
2729 shoot_parameters_trunk.phytomer_parameters = phytomer_parameters_walnut;
+
2730 shoot_parameters_trunk.phytomer_parameters.internode.phyllotactic_angle = 0;
+
2731 shoot_parameters_trunk.phytomer_parameters.internode.radius_initial = 0.01;
+
2732 shoot_parameters_trunk.phytomer_parameters.internode.radial_subdivisions = 24;
+
2733 shoot_parameters_trunk.max_nodes = 20;
+
2734 shoot_parameters_trunk.girth_area_factor = 3.f;
+
2735 shoot_parameters_trunk.vegetative_bud_break_probability_min = 0;
+
2736 shoot_parameters_trunk.vegetative_bud_break_time = 0;
+
2737 shoot_parameters_trunk.tortuosity = 1;
+
2738 shoot_parameters_trunk.internode_length_max = 0.05;
+
2739 shoot_parameters_trunk.internode_length_decay_rate = 0;
+
2740 shoot_parameters_trunk.defineChildShootTypes({"scaffold"},{1});
+
2741
+
2742 // Proleptic shoots
+
2743 ShootParameters shoot_parameters_proleptic(context_ptr->getRandomGenerator());
+
2744 shoot_parameters_proleptic.phytomer_parameters = phytomer_parameters_walnut;
+
2745 shoot_parameters_proleptic.phytomer_parameters.internode.color = make_RGBcolor(0.3,0.2,0.2);
+
2746 shoot_parameters_proleptic.phytomer_parameters.phytomer_creation_function = WalnutPhytomerCreationFunction;
+
2747 // shoot_parameters_proleptic.phytomer_parameters.phytomer_callback_function = WalnutPhytomerCallbackFunction;
+
2748 shoot_parameters_proleptic.max_nodes = 30;
+
2749 shoot_parameters_proleptic.max_nodes_per_season = 15;
+
2750 shoot_parameters_proleptic.phyllochron_min = 2.;
+
2751 shoot_parameters_proleptic.elongation_rate = 0.15;
+
2752 shoot_parameters_proleptic.girth_area_factor = 10.f;
+
2753 shoot_parameters_proleptic.vegetative_bud_break_probability_min = 0.05;
+
2754 shoot_parameters_proleptic.vegetative_bud_break_probability_decay_rate = 0.6;
+
2755 shoot_parameters_proleptic.vegetative_bud_break_time = 3;
+
2756 shoot_parameters_proleptic.gravitropic_curvature = 200;
+
2757 shoot_parameters_proleptic.tortuosity = 5;
+
2758 shoot_parameters_proleptic.insertion_angle_tip.uniformDistribution( 20, 25);
+
2759 shoot_parameters_proleptic.insertion_angle_decay_rate = 15;
+
2760 shoot_parameters_proleptic.internode_length_max = 0.08;
+
2761 shoot_parameters_proleptic.internode_length_min = 0.01;
+
2762 shoot_parameters_proleptic.internode_length_decay_rate = 0.006;
+
2763 shoot_parameters_proleptic.fruit_set_probability = 0.5;
+
2764 shoot_parameters_proleptic.flower_bud_break_probability = 0.3;
+
2765 shoot_parameters_proleptic.max_terminal_floral_buds = 4;
+
2766 shoot_parameters_proleptic.flowers_require_dormancy = true;
+
2767 shoot_parameters_proleptic.growth_requires_dormancy = true;
+
2768 shoot_parameters_proleptic.determinate_shoot_growth = false;
+
2769 shoot_parameters_proleptic.defineChildShootTypes({"proleptic"},{1.0});
+
2770
+
2771 // Main scaffolds
+
2772 ShootParameters shoot_parameters_scaffold = shoot_parameters_proleptic;
+
2773 shoot_parameters_scaffold.phytomer_parameters.internode.radial_subdivisions = 10;
+
2774 shoot_parameters_scaffold.max_nodes = 30;
+
2775 shoot_parameters_scaffold.gravitropic_curvature = 300;
+
2776 shoot_parameters_scaffold.internode_length_max = 0.06;
+
2777 shoot_parameters_scaffold.tortuosity = 4;
+
2778 shoot_parameters_scaffold.defineChildShootTypes({"proleptic"},{1.0});
+
2779
+
2780 defineShootType("trunk", shoot_parameters_trunk);
+
2781 defineShootType("scaffold", shoot_parameters_scaffold);
+
2782 defineShootType("proleptic", shoot_parameters_proleptic);
+
2783
+
2784}
+
2785
+
2786uint PlantArchitecture::buildWalnutTree(const helios::vec3 &base_position) {
+
2787
+
2788 if( shoot_types.empty() ){
+
2789 //automatically initialize walnut tree shoots
+
2790 initializeWalnutTreeShoots();
+
2791 }
+
2792
+
2793 uint plantID = addPlantInstance(base_position, 0);
+
2794
+
2795 uint uID_trunk = addBaseStemShoot(plantID, 19, make_AxisRotation(context_ptr->randu(0.f, 0.05f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), 0.f * M_PI), shoot_types.at("trunk").phytomer_parameters.internode.radius_initial.val(), 0.04, 1.f, 1.f, 0, "trunk");
+
2796 appendPhytomerToShoot( plantID, uID_trunk, shoot_types.at("trunk").phytomer_parameters, 0, 0.01, 1, 1);
+
2797
+
2798 plant_instances.at(plantID).shoot_tree.at(uID_trunk)->meristem_is_alive = false;
+
2799
+
2800 auto phytomers = plant_instances.at(plantID).shoot_tree.at(uID_trunk)->phytomers;
+
2801 for( const auto & phytomer : phytomers ){
+
2802 phytomer->removeLeaf();
+
2803 phytomer->setVegetativeBudState(BUD_DEAD);
+
2804 phytomer->setFloralBudState(BUD_DEAD);
+
2805 }
+
2806
+
2807 uint Nscaffolds = 4;//context_ptr->randu(4,5);
+
2808
+
2809 for( int i=0; i<Nscaffolds; i++ ) {
+
2810// float pitch = context_ptr->randu(deg2rad(25), deg2rad(35))+i*deg2rad(7.f);
+
2811 float pitch = context_ptr->randu(deg2rad(45), deg2rad(55));
+
2812 uint uID_shoot = addChildShoot( plantID, uID_trunk, getShootNodeCount(plantID,uID_trunk)-i-1, context_ptr->randu(7, 9), make_AxisRotation(pitch, (float(i) + context_ptr->randu(-0.2f, 0.2f)) / float(Nscaffolds) * 2 * M_PI, 0), 0.007, 0.06, 1.f, 1.f, 0.5, "scaffold", 0);
+
2813
+
2814 }
+
2815
+
2816 makePlantDormant(plantID);
+
2817
+
2818 setPlantPhenologicalThresholds(plantID, 165, -1, 3, 7, 20, 200, false);
+
2819
+
2820 plant_instances.at(plantID).max_age = 1095;
+
2821
+
2822 return plantID;
+
2823
+
2824}
+
2825
+
2826void PlantArchitecture::initializeWheatShoots() {
+
2827
+
2828 // ---- Leaf Prototype ---- //
+
2829
+
2830 LeafPrototype leaf_prototype(context_ptr->getRandomGenerator());
+
2831 leaf_prototype.leaf_texture_file[0] = "plugins/plantarchitecture/assets/textures/SorghumLeaf.png";
+
2832 leaf_prototype.leaf_aspect_ratio = 0.1f;
+
2833 leaf_prototype.midrib_fold_fraction = 0.3f;
+
2834 leaf_prototype.longitudinal_curvature.uniformDistribution(-0.5, -0.1);
+
2835 leaf_prototype.lateral_curvature = -0.3;
+
2836 leaf_prototype.petiole_roll = 0.04f;
+
2837 leaf_prototype.wave_period = 0.1f;
+
2838 leaf_prototype.wave_amplitude = 0.1f;
+
2839 leaf_prototype.leaf_buckle_length.uniformDistribution(0.5,0.6);
+
2840 leaf_prototype.leaf_buckle_angle.uniformDistribution(25,35);
+
2841 leaf_prototype.subdivisions = 20;
+
2842 leaf_prototype.unique_prototypes = 10;
+
2843
+
2844 // ---- Phytomer Parameters ---- //
+
2845
+
2846 PhytomerParameters phytomer_parameters_wheat(context_ptr->getRandomGenerator());
+
2847
+
2848 phytomer_parameters_wheat.internode.pitch = 0;
+
2849 phytomer_parameters_wheat.internode.phyllotactic_angle.uniformDistribution(67,77);
+
2850 phytomer_parameters_wheat.internode.radius_initial = 0.001;
+
2851 phytomer_parameters_wheat.internode.color = make_RGBcolor(0.27,0.31,0.16);
+
2852 phytomer_parameters_wheat.internode.length_segments = 1;
+
2853 phytomer_parameters_wheat.internode.radial_subdivisions = 6;
+
2854 phytomer_parameters_wheat.internode.max_floral_buds_per_petiole = 0;
+
2855 phytomer_parameters_wheat.internode.max_vegetative_buds_per_petiole = 0;
+
2856
+
2857 phytomer_parameters_wheat.petiole.petioles_per_internode = 1;
+
2858 phytomer_parameters_wheat.petiole.pitch.uniformDistribution(-40,-20);
+
2859 phytomer_parameters_wheat.petiole.radius = 0.0;
+
2860 phytomer_parameters_wheat.petiole.length = 0.005;
+
2861 phytomer_parameters_wheat.petiole.taper = 0;
+
2862 phytomer_parameters_wheat.petiole.curvature = 0;
+
2863 phytomer_parameters_wheat.petiole.length_segments = 1;
+
2864
+
2865 phytomer_parameters_wheat.leaf.leaves_per_petiole = 1;
+
2866 phytomer_parameters_wheat.leaf.pitch = 0;
+
2867 phytomer_parameters_wheat.leaf.yaw = 0;
+
2868 phytomer_parameters_wheat.leaf.roll = 0;
+
2869 phytomer_parameters_wheat.leaf.prototype_scale = 0.22;
+
2870 phytomer_parameters_wheat.leaf.prototype = leaf_prototype;
+
2871
+
2872 phytomer_parameters_wheat.peduncle.length = 0.1;
+
2873 phytomer_parameters_wheat.peduncle.radius = 0.002;
+
2874 phytomer_parameters_wheat.peduncle.color = phytomer_parameters_wheat.internode.color;
+
2875 phytomer_parameters_wheat.peduncle.curvature = -100;
+
2876 phytomer_parameters_wheat.peduncle.radial_subdivisions = 6;
+
2877
+
2878 phytomer_parameters_wheat.inflorescence.flowers_per_peduncle = 1;
+
2879 phytomer_parameters_wheat.inflorescence.pitch = 0;
+
2880 phytomer_parameters_wheat.inflorescence.roll = 0;
+
2881 phytomer_parameters_wheat.inflorescence.fruit_prototype_scale = 0.1;
+
2882 phytomer_parameters_wheat.inflorescence.fruit_prototype_function = WheatSpikePrototype;
+
2883
+
2884 phytomer_parameters_wheat.phytomer_creation_function = WheatPhytomerCreationFunction;
+
2885
+
2886 // ---- Shoot Parameters ---- //
+
2887
+
2888 ShootParameters shoot_parameters_mainstem(context_ptr->getRandomGenerator());
+
2889 shoot_parameters_mainstem.phytomer_parameters = phytomer_parameters_wheat;
+
2890 shoot_parameters_mainstem.vegetative_bud_break_probability_min = 0;
+
2891 shoot_parameters_mainstem.flower_bud_break_probability = 1;
+
2892 shoot_parameters_mainstem.phyllochron_min = 2;
+
2893 shoot_parameters_mainstem.elongation_rate = 0.1;
+
2894 shoot_parameters_mainstem.girth_area_factor = 6.f;
+
2895 shoot_parameters_mainstem.gravitropic_curvature.uniformDistribution(-500,-200);
+
2896 shoot_parameters_mainstem.flowers_require_dormancy = false;
+
2897 shoot_parameters_mainstem.growth_requires_dormancy = false;
+
2898 shoot_parameters_mainstem.determinate_shoot_growth = false;
+
2899 shoot_parameters_mainstem.fruit_set_probability = 1.0;
+
2900 shoot_parameters_mainstem.defineChildShootTypes({"mainstem"},{1.0});
+
2901 shoot_parameters_mainstem.max_nodes = 20;
+
2902 shoot_parameters_mainstem.max_terminal_floral_buds = 1;
+
2903
+
2904 defineShootType("mainstem",shoot_parameters_mainstem);
+
2905
+
2906}
+
2907
+
2908uint PlantArchitecture::buildWheatPlant(const helios::vec3 &base_position) {
+
2909
+
2910 if (shoot_types.empty()) {
+
2911 //automatically initialize wheat plant shoots
+
2912 initializeWheatShoots();
+
2913 }
+
2914
+
2915 uint plantID = addPlantInstance(base_position - make_vec3(0,0,0.025), 0);
+
2916
+
2917 uint uID_stem = addBaseStemShoot(plantID, 1, make_AxisRotation(context_ptr->randu(0.f, 0.05f * M_PI), context_ptr->randu(0.f, 2.f * M_PI), context_ptr->randu(0.f, 2.f * M_PI)), 0.001, 0.025, 0.01, 0.01, 0, "mainstem");
+
2918
+
2919 breakPlantDormancy(plantID);
+
2920
+
2921 setPlantPhenologicalThresholds(plantID, 0, -1, -1, 4, 10, 1000, false);
+
2922
+
2923 plant_instances.at(plantID).max_age = 365;
+
2924
+
2925 return plantID;
+
2926
+
2927}
-
PlantArchitecture::setPlantPhenologicalThresholds
void setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
Specify the threshold values for plant phenological stages.
Definition: PlantArchitecture.cpp:2692
-
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition: PlantArchitecture.cpp:2613
-
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition: PlantArchitecture.cpp:1980
-
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition: PlantArchitecture.cpp:2059
-
PlantArchitecture::getCurrentShootParameters
std::map< std::string, ShootParameters > getCurrentShootParameters()
Get the shoot parameters structure for all shoot types in the current plant model.
Definition: PlantLibrary.cpp:99
-
PlantArchitecture::advanceTime
void advanceTime(float time_step_days)
Advance plant growth by a specified time interval for all plants.
Definition: PlantArchitecture.cpp:2721
-
PlantArchitecture::updateCurrentShootParameters
void updateCurrentShootParameters(const std::string &shoot_type_label, const ShootParameters &params)
Update the parameters of a single shoot type in the current plant model.
Definition: PlantLibrary.cpp:117
-
PlantArchitecture::appendShoot
uint appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of...
Definition: PlantArchitecture.cpp:1936
-
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition: PlantArchitecture.cpp:1905
-
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition: PlantArchitecture.cpp:247
-
PlantArchitecture::getCurrentPhytomerParameters
std::map< std::string, PhytomerParameters > getCurrentPhytomerParameters()
Get the phytomer parameters structure for all shoot types in the current plant model.
Definition: PlantLibrary.cpp:106
-
PlantArchitecture::buildPlantInstanceFromLibrary
uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
Build a plant instance based on the model currently loaded from the library.
Definition: PlantLibrary.cpp:27
-
PlantArchitecture::loadPlantModelFromLibrary
void loadPlantModelFromLibrary(const std::string &plant_label)
Load an existing plant model from the library.
Definition: PlantLibrary.cpp:20
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition: Context.cpp:49
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition: global.cpp:576
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
- - -
LeafPrototype::leaf_texture_file
std::map< int, std::string > leaf_texture_file
Image texture file for the leaf.
Definition: PlantArchitecture.h:342
-
LeafPrototype::unique_prototypes
uint unique_prototypes
Number of unique prototypes to generate.
Definition: PlantArchitecture.h:378
- -
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition: PlantArchitecture.h:640
- -
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
PlantArchitecture::setPlantPhenologicalThresholds
void setPlantPhenologicalThresholds(uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
Specify the threshold values for plant phenological stages.
Definition PlantArchitecture.cpp:2692
+
PlantArchitecture::addPlantInstance
uint addPlantInstance(const helios::vec3 &base_position, float current_age)
Create an instance of a plant.
Definition PlantArchitecture.cpp:2613
+
PlantArchitecture::addChildShoot
uint addChildShoot(uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
Manually add a child shoot at the axillary bud of a phytomer.
Definition PlantArchitecture.cpp:1980
+
PlantArchitecture::appendPhytomerToShoot
int appendPhytomerToShoot(uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
Add a new phytomer at the terminal bud of a shoot.
Definition PlantArchitecture.cpp:2059
+
PlantArchitecture::getCurrentShootParameters
std::map< std::string, ShootParameters > getCurrentShootParameters()
Get the shoot parameters structure for all shoot types in the current plant model.
Definition PlantLibrary.cpp:99
+
PlantArchitecture::advanceTime
void advanceTime(float time_step_days)
Advance plant growth by a specified time interval for all plants.
Definition PlantArchitecture.cpp:2721
+
PlantArchitecture::updateCurrentShootParameters
void updateCurrentShootParameters(const std::string &shoot_type_label, const ShootParameters &params)
Update the parameters of a single shoot type in the current plant model.
Definition PlantLibrary.cpp:117
+
PlantArchitecture::appendShoot
uint appendShoot(uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of...
Definition PlantArchitecture.cpp:1936
+
PlantArchitecture::addBaseStemShoot
uint addBaseStemShoot(uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has ...
Definition PlantArchitecture.cpp:1905
+
PlantArchitecture::defineShootType
void defineShootType(const std::string &shoot_type_label, const ShootParameters &shoot_params)
Define a new shoot type based on a set of ShootParameters.
Definition PlantArchitecture.cpp:247
+
PlantArchitecture::getCurrentPhytomerParameters
std::map< std::string, PhytomerParameters > getCurrentPhytomerParameters()
Get the phytomer parameters structure for all shoot types in the current plant model.
Definition PlantLibrary.cpp:106
+
PlantArchitecture::buildPlantInstanceFromLibrary
uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
Build a plant instance based on the model currently loaded from the library.
Definition PlantLibrary.cpp:27
+
PlantArchitecture::loadPlantModelFromLibrary
void loadPlantModelFromLibrary(const std::string &plant_label)
Load an existing plant model from the library.
Definition PlantLibrary.cpp:20
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::getRandomGenerator
std::minstd_rand0 * getRandomGenerator()
Get the random number generator engine.
Definition Context.cpp:49
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition global.cpp:576
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+ + +
LeafPrototype::leaf_texture_file
std::map< int, std::string > leaf_texture_file
Image texture file for the leaf.
Definition PlantArchitecture.h:342
+
LeafPrototype::unique_prototypes
uint unique_prototypes
Number of unique prototypes to generate.
Definition PlantArchitecture.h:378
+ +
PhytomerParameters::phytomer_creation_function
void(* phytomer_creation_function)(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age)
Definition PlantArchitecture.h:640
+ +
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_plug_ins.html b/doc/html/_plug_ins.html index 6fe16f547..967da26b0 100644 --- a/doc/html/_plug_ins.html +++ b/doc/html/_plug_ins.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Plug-ins
+
Plug-ins

Links to the documentation for plug-ins are given below. The documentation for plug-ins have several common elements that tell you what is needed to run them.

@@ -116,7 +128,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_plugins.html b/doc/html/_plugins.html index 914796a18..0e0446624 100644 --- a/doc/html/_plugins.html +++ b/doc/html/_plugins.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Writing Plugins
+
Writing Plugins

Table of Contents

-

@@ -121,7 +143,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_radiation_doc.html b/doc/html/_radiation_doc.html index a3c859451..3a4a06091 100644 --- a/doc/html/_radiation_doc.html +++ b/doc/html/_radiation_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Radiation Model Plugin Documentation
+
Radiation Model Plugin Documentation

Table of Contents

-
@@ -155,13 +237,13 @@

Package
-td
+
-td
+
-td + NVIDIA CUDA 9.0+ Mac OSX:
$ brew install Caskroom/cask/cuda
Use CUDA installer Use CUDA installer @@ -197,7 +279,7 @@

emissivity_* unitless float Primitive emissivity for band * (i.e., emissivity for band 'PAR' would be 'emissivity_PAR'). NOTE: Only needed if performing emission calculations. N/A 1.0 -twosided_flag N/A uint Flag to determine whether a primitive should be treated as two-sided (=1) or single-sided (=0). See Sect. Area Basis for Calculating Fluxes below for more information. N/A 1 +twosided_flag N/A uint Flag to determine whether a primitive should be treated as two-sided (=1) or single-sided (=0). See Sect. Area Basis for Calculating Fluxes below for more information. N/A 1


@@ -215,7 +297,7 @@

Model Class Constructor

The radiation model class contains functions and data associated with the model. To begin, declare an instance of the RadiationModel class. The class constructor takes one argument - a pointer to the Helios context. It uses this pointer to access model geometry and data in the context.

RadiationModel radiationmodel(&context); //declare the model class
-
RadiationModel
Radiation transport model plugin.
Definition: RadiationModel.h:263
+
RadiationModel
Radiation transport model plugin.
Definition RadiationModel.h:263

Area Basis for Calculating Fluxes

The ultimate outputs of the radiation model are absorbed radiative fluxes, which is the rate of radiative energy transfer per unit surface area. All flux calculations are on a per unit one-sided surface area basis. For planar primitive elements (patches and triangles), this means that the flux will be the rate of radiative energy absorption on both sides of the primitive, divided by the one-sided surface area of the primitive (i.e., that returned by the helios::Primitive::getArea() function).

@@ -273,7 +355,7 @@

float tau = 0.1; //transmissivity value
context.setPrimitiveData( UUID, "transmissivity_PAR", tau);

Note that absorptivity is not directly set, rather it is calculated as $1-\rho-\tau$. If $1-\rho-\tau$ is calculated to be negative or greater than 1, an error is thrown.

-

If reflectivity or transmissivity primitive data does not exist for a primitive, a default value of 0 is assumed. If radiative properties are changed from default values, the number of scattering iterations needs to be increased from the default value of 0 (see Scattering Iterations). If radiative properties are changed, but the number of scattering iterations is set to the default value of 0, the modified radiative property values are overridden and set back to their default values (black surface).

+

If reflectivity or transmissivity primitive data does not exist for a primitive, a default value of 0 is assumed. If radiative properties are changed from default values, the number of scattering iterations needs to be increased from the default value of 0 (see Scattering Iterations). If radiative properties are changed, but the number of scattering iterations is set to the default value of 0, the modified radiative property values are overridden and set back to their default values (black surface).

2. Specifying reflectivity and transmissivity based on spectral data

Spectral reflectivity or transmissivity data can be associated with a primitive, such that the radiative properties for a given band can be calculated automatically. At a minimum, two things must be set in order for this to happen: a) the radiation band must have been created with a defined wavelength range (see above and method RadiationModel::addRadiationBand( const std::string&, float, float) ); b) primitive data with label "reflectivity_spectrum" and/or "transmissivity_spectrum" must be set for the primitive, and the value (a string) must reference a valid spectral dataset that has been loaded into the Context.

Below is a code example for specifying the reflectivity and transmissivity for a primitive based on spectral data. In this case, the model will assume the source spectral distribution is constant over all wave bands, and thus total reflectivity/transmissivity is just the integral of the spectral reflectivity/transmissivity. If there was a radiative source with a specified spectral distribution, the total reflectivity/transmissivity would be calculated by integrating the product of the reflectivity/transmissivity and source spectral intensity (example given for reflectivity only):

@@ -294,7 +376,7 @@

context.setPrimitiveData( UUID, "transmissivity_spectrum", "grape_leaf_transmissivity_0000" );
// Declare the radiation model
-
%RadiationModel radiationmodel(&context);
+
RadiationModel radiationmodel(&context);
// Add a band with explicit wavelength bounds (400-700nm)
radiationmodel.addRadiationBand( "PAR", 400, 700 );
@@ -358,7 +440,7 @@

radiationmodel.setSourceFlux(RectSource,"PAR",800); //set the flux of the source

Setting the Radiation Source Spectral Distribution and Normalization

-

In the above examples, the source flux was specified directly for each band, and integrated surface radiative properties assumed the source flux spectral distribution was constant over the wave band. Optionally, users can specify a source spectral distribution by referencing a spectral distribution that has been loaded into the Context based on the procedure described above (Radiative Properties).

+

In the above examples, the source flux was specified directly for each band, and integrated surface radiative properties assumed the source flux spectral distribution was constant over the wave band. Optionally, users can specify a source spectral distribution by referencing a spectral distribution that has been loaded into the Context based on the procedure described above (Radiative Properties).

The RadiationModel::setSourceSpectrum() method sets the source spectral flux distribution, and takes two arguments: 1) The identifier of a radiative source (i.e., the output argument of the add[*]Source() call), 2) The label (string) of a spectral distribution that has been loaded into the Context.

The main difference between the spectral distribution data for radiative properties and for sources is that for sources each ".y" value in the spectral dataset is the spectral-hemispherical emitted flux at that wavelength (".x") in units of W/m2/nm.

An example of setting the source distribution based on the ASTMG173 standard solar spectral distribution is given below. Note that the ASTMG173 solar spectrum is automatically loaded by the radiation model. However, in general, the user needs to load an XML file containing the spectral data into the Context. For example,

@@ -464,8 +546,8 @@

uint antialiasing_samples = 100;
radiationmodel.addRadiationCamera("visible", {"red","green","blue"}, camera_position, camera_lookat, properties, antialiasing_samples );
-
CameraProperties
Properties defining a radiation camera.
Definition: RadiationModel.h:31
-
CameraProperties::HFOV
float HFOV
Camera horizontal field of view in degrees.
Definition: RadiationModel.h:47
+
CameraProperties
Properties defining a radiation camera.
Definition RadiationModel.h:31
+
CameraProperties::HFOV
float HFOV
Camera horizontal field of view in degrees.
Definition RadiationModel.h:47

This will add a 3-band RGB camera, and assumes that radiation bands with labels "red", "green", and "blue" have been added based on a call to RadiationModel::addBand().

Radiation Camera Color Calibration

@@ -604,16 +686,16 @@

- -
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition: Context.cpp:1059
-
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition: Context.cpp:1136
-
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition: Context.cpp:5646
-
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:5809
-
helios::wait
void wait(float seconds)
Wait/sleep for a specified amount of time.
Definition: global.cpp:306
- -
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::setDate
void setDate(int day, int month, int year)
Set simulation date by day, month, year.
Definition Context.cpp:1059
+
helios::Context::setTime
void setTime(int minute, int hour)
Set simulation time.
Definition Context.cpp:1136
+
helios::Context::addSphere
std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
Add a spherical compound object to the Context.
Definition Context.cpp:5646
+
helios::Context::addTile
std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:5809
+
helios::wait
void wait(float seconds)
Wait/sleep for a specified amount of time.
Definition global.cpp:306
+ +
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503

Model Outputs

@@ -639,7 +721,7 @@

vis.enableColorbar();
vis.plotInteractive();
-
helios::Context::aggregatePrimitiveDataSum
void aggregatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Sum multiple primitive data values for each primitive together and store result in new primitive data...
Definition: Context_data.cpp:1958
+
helios::Context::aggregatePrimitiveDataSum
void aggregatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
Sum multiple primitive data values for each primitive together and store result in new primitive data...
Definition Context_data.cpp:1958

Integrating Fluxes

While visualizations provide an overview of the spatial distribution of radiative fluxes, the ultimate goal of radiation simulations is usually to integrate over some region in order to calculate aggregate fluxes and related quantities. There are many examples of such integration, such as calculating the fraction of incoming radiation intercepted by the canopy, or calculating the overall fraction of sunlit leaf area.

@@ -657,7 +739,7 @@

float fPAR = PAR_tree/(PAR_tree+PAR_ground);
std::cout << "Fraction of intercepted PAR is " << fPAR << std::endl;
-
helios::Context::calculatePrimitiveDataAreaWeightedSum
void calculatePrimitiveDataAreaWeightedSum(const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
Calculate sum of primitive data values (float) for a subset of primitives, where each value in the su...
Definition: Context_data.cpp:1667
+
helios::Context::calculatePrimitiveDataAreaWeightedSum
void calculatePrimitiveDataAreaWeightedSum(const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
Calculate sum of primitive data values (float) for a subset of primitives, where each value in the su...
Definition Context_data.cpp:1667

The above example assumes that we have already added some geometry to the Context, separated leaf and ground UUIDs, and declared and set up the radiation model. For a full example, see Tutorial 10.

Writing Camera Images to File

@@ -732,10 +814,10 @@

return 0;
}
-
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition: Context_fileIO.cpp:3378
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
CameraProperties::focal_plane_distance
float focal_plane_distance
Distance from the viewing plane to the focal plane.
Definition: RadiationModel.h:41
+
helios::Context::loadPLY
std::vector< uint > loadPLY(const char *filename, bool silent=false)
Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
Definition Context_fileIO.cpp:3378
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
CameraProperties::focal_plane_distance
float focal_plane_distance
Distance from the viewing plane to the focal plane.
Definition RadiationModel.h:41

The above code would produce an image in the build directory called "camera_visible_myimage.jpeg", which is shown below, along with a file labels.txt that contains the primitive data labels for each pixel.

@@ -747,7 +829,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_radiation_model_8cpp.html b/doc/html/_radiation_model_8cpp.html index bcf78f11f..05ad9feb8 100644 --- a/doc/html/_radiation_model_8cpp.html +++ b/doc/html/_radiation_model_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Functions
@@ -100,9 +112,9 @@ - + - +

Functions

void sutilHandleError (RTcontext context, RTresult code, const char *file, int line)
void sutilHandleError (RTcontext context, RTresult code, const char *file, int line)
 
void sutilReportError (const char *message)
void sutilReportError (const char *message)
 

Detailed Description

@@ -122,31 +134,22 @@

void sutilHandleError ( - RTcontext  - context, + RTcontext context, - RTresult  - code, + RTresult code, - const char *  - file, + const char * file, - int  - line  - - - - ) - + int line )

@@ -164,8 +167,7 @@

void sutilReportError ( - const char *  - message) + const char * message) @@ -178,7 +180,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_radiation_model_8cpp_source.html b/doc/html/_radiation_model_8cpp_source.html index f2535a8bd..bf367ecf1 100644 --- a/doc/html/_radiation_model_8cpp_source.html +++ b/doc/html/_radiation_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
RadiationModel.cpp
@@ -97,6 +109,7 @@
17
18using namespace helios;
19
+
20RadiationModel::RadiationModel( helios::Context* context_a ){
21
22 context = context_a;
@@ -137,19 +150,27 @@
57 initializeOptiX();
58
59}
+
60
+
61RadiationModel::~RadiationModel(){
62 RT_CHECK_ERROR( rtContextDestroy( OptiX_Context ) );
63}
+
64
+
65void RadiationModel::disableMessages() {
66 message_flag=false;
67}
+
68
+
69void RadiationModel::enableMessages() {
70 message_flag=true;
71}
+
72
+
73void RadiationModel::optionalOutputPrimitiveData( const char* label ){
74
75 if( strcmp(label,"reflectivity")==0 || strcmp(label,"transmissivity")==0 ){
@@ -159,32 +180,42 @@
79 }
80
81}
+
82
+
83void RadiationModel::setDirectRayCount( const std::string &label, size_t N ){
84 if( !doesBandExist(label) ){
85 helios_runtime_error("ERROR (RadiationModel::setDirectRayCount): Cannot set ray count for band '" + label + "' because it is not a valid band.");
86 }
87 radiation_bands.at(label).directRayCount = N;
88}
+
89
+
90void RadiationModel::setDiffuseRayCount( const std::string &label, size_t N ){
91 if( !doesBandExist(label) ){
92 helios_runtime_error("ERROR (RadiationModel::setDiffuseRayCount): Cannot set ray count for band '" + label + "' because it is not a valid band." );
93 }
94 radiation_bands.at(label).diffuseRayCount = N;
95}
+
96
+
97void RadiationModel::setDiffuseRadiationFlux( const std::string &label, float flux ){
98 if( !doesBandExist(label) ){
99 helios_runtime_error("ERROR (RadiationModel::setDiffuseRadiationFlux): Cannot set flux value for band '" + label + "' because it is not a valid band." );
100 }
101 radiation_bands.at(label).diffuseFlux = flux;
102}
+
103
+
104void RadiationModel::setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const SphericalCoord &peak_dir ){
105 setDiffuseRadiationExtinctionCoeff( label,K,sphere2cart(peak_dir) );
106}
+
107
+
108void RadiationModel::setDiffuseRadiationExtinctionCoeff( const std::string &label, float K, const vec3 &peak_dir ){
109 if( !doesBandExist(label) ){
110 helios_runtime_error("ERROR (RadiationModel::setDiffuseRadiationExtinctionCoeff): Cannot set diffuse extinction value for band '" + label + "' because it is not a valid band.");
@@ -219,7 +250,9 @@
139 radiation_bands.at(label).diffuseDistNorm = 1.f/norm;
140
141}
+
142
+
143void RadiationModel::setDiffuseSpectrumIntegral( float spectrum_integral){
144
145 for( auto &band : radiation_bands ) {
@@ -227,7 +260,9 @@
147 }
148
149}
+
150
+
151void RadiationModel::setDiffuseSpectrumIntegral( float spectrum_integral, float wavelength1, float wavelength2){
152
153 for( auto &band : radiation_bands ) {
@@ -235,7 +270,9 @@
155 }
156
157}
+
158
+
159void RadiationModel::setDiffuseSpectrumIntegral( const std::string &band_label, float spectrum_integral){
160
161 if( spectrum_integral<0 ){
@@ -254,7 +291,9 @@
174 }
175
176}
+
177
+
178void RadiationModel::setDiffuseSpectrumIntegral( const std::string &band_label, float spectrum_integral, float wavelength1, float wavelength2){
179
180 if( spectrum_integral<0 ){
@@ -270,7 +309,9 @@
190 }
191
192}
+
193
+
194void RadiationModel::addRadiationBand(const std::string &label ){
195
196 if( radiation_bands.find(label)!=radiation_bands.end() ){
@@ -288,7 +329,9 @@
208 }
209
210}
+
211
+
212void RadiationModel::addRadiationBand( const std::string &label, float wavelength1, float wavelength2 ){
213
214 if( radiation_bands.find(label)!=radiation_bands.end() ){
@@ -317,7 +360,9 @@
237
238
239}
+
240
+
241void RadiationModel::copyRadiationBand( const std::string &old_label, const std::string &new_label ) {
242
243 if( !doesBandExist(old_label) ){
@@ -328,7 +373,9 @@
248
249 copyRadiationBand( old_label, new_label, waveBounds.x, waveBounds.y );
250}
+
251
+
252void RadiationModel::copyRadiationBand(const std::string &old_label, const std::string &new_label, float wavelength_min, float wavelength_max ){
253
254 if( !doesBandExist(old_label) ){
@@ -347,7 +394,9 @@
267 }
268
269}
+
270
+
271bool RadiationModel::doesBandExist( const std::string &label ) const{
272 if( radiation_bands.find(label)==radiation_bands.end() ){
273 return false;
@@ -355,7 +404,9 @@
275 return true;
276 }
277}
+
278
+
279void RadiationModel::disableEmission( const std::string &label ){
280
281 if( !doesBandExist(label) ){
@@ -365,7 +416,9 @@
285 radiation_bands.at(label).emissionFlag = false;
286
287}
+
288
+
289void RadiationModel::enableEmission( const std::string &label ){
290
291 if( !doesBandExist(label) ){
@@ -375,17 +428,23 @@
295 radiation_bands.at(label).emissionFlag = true;
296
297}
+
298
+
304
+
308
+
309uint RadiationModel::addCollimatedRadiationSource(const vec3 &direction ){
310
311 if( direction.magnitude()==0 ){
@@ -419,7 +478,9 @@
339 return Nsources-1;
340
341}
+
342
+
343uint RadiationModel::addSphereRadiationSource( const vec3 &position, float radius ){
344
345 if( radius<=0 ){
@@ -449,15 +510,21 @@
369 return sourceID;
370
371}
+
372
+
376
+
377uint RadiationModel::addSunSphereRadiationSource(const SphericalCoord &sun_direction ){
378 return addSunSphereRadiationSource( sphere2cart(sun_direction) );
379}
+
380
+
381uint RadiationModel::addSunSphereRadiationSource(const vec3 &sun_direction ){
382
383 uint Nsources = radiation_sources.size()+1;
@@ -487,7 +554,9 @@
407 return Nsources-1;
408
409}
+
410
+
411uint RadiationModel::addRectangleRadiationSource( const vec3 &position, const vec2 &size, const vec3& rotation ){
412
413 if( size.x<=0 || size.y<=0 ){
@@ -517,7 +586,9 @@
437 return sourceID;
438
439}
+
440
+
441uint RadiationModel::addDiskRadiationSource( const vec3 &position, float radius, const vec3& rotation ){
442
443 if( radius<=0 ){
@@ -548,7 +619,9 @@
468
469
470}
+
471
+
472void RadiationModel::deleteRadiationSource(uint sourceID){
473
474 if( sourceID >= radiation_sources.size() ){
@@ -558,7 +631,9 @@
478 radiation_sources.erase(radiation_sources.begin()+sourceID);
479
480}
+
481
+
482void RadiationModel::setSourceSpectrumIntegral(uint source_ID, float source_integral){
483
484 if( source_ID >= radiation_sources.size() ){
@@ -574,7 +649,9 @@
494 }
495
496}
+
497
+
498void RadiationModel::setSourceSpectrumIntegral(uint source_ID, float source_integral, float wavelength1, float wavelength2){
499
500 if( source_ID >= radiation_sources.size() ){
@@ -595,7 +672,9 @@
515 }
516
517}
+
518
+
519void RadiationModel::setSourceFlux( uint source_ID, const std::string &label, float flux ){
520
521 if( !doesBandExist(label) ){
@@ -611,13 +690,17 @@
531 radiation_sources.at(source_ID).source_fluxes[label] = flux * radiation_sources.at(source_ID).source_flux_scaling_factor;
532
533}
+
534
+
535void RadiationModel::setSourceFlux(const std::vector<uint> &source_ID, const std::string &band_label, float flux ){
536 for( auto ID : source_ID ){
537 setSourceFlux( ID, band_label, flux );
538 }
539}
+
540
+
541float RadiationModel::getSourceFlux( uint source_ID, const std::string &label )const{
542
543 if( !doesBandExist(label) ){
@@ -643,7 +726,9 @@
563 return source.source_fluxes.at(label);
564
565}
+
566
+
567void RadiationModel::setSourceSpectrum( uint source_ID, const std::vector<helios::vec2> &spectrum ){
568
569 if( source_ID >= radiation_sources.size() ){
@@ -669,13 +754,17 @@
589 radiation_sources.at(source_ID).source_spectrum = spectrum;
590
591}
+
592
+
593void RadiationModel::setSourceSpectrum(const std::vector<uint> &source_ID, const std::vector<helios::vec2> &spectrum ) {
594 for (auto ID: source_ID) {
595 setSourceSpectrum(ID, spectrum);
596 }
597}
+
598
+
599void RadiationModel::setSourceSpectrum(uint source_ID, const std::string &spectrum_label ){
600
601 if( source_ID >= radiation_sources.size() ){
@@ -688,13 +777,17 @@
608 radiation_sources.at(source_ID).source_spectrum_label = spectrum_label;
609
610}
+
611
+
612void RadiationModel::setSourceSpectrum(const std::vector<uint> &source_ID, const std::string &spectrum_label ){
613 for (auto ID: source_ID) {
614 setSourceSpectrum(ID, spectrum_label);
615 }
616}
+
617
+
618void RadiationModel::setDiffuseSpectrum( const std::string &spectrum_label ){
619
620 std::vector<vec2> spectrum;
@@ -711,7 +804,9 @@
631 }
632
633}
+
634
+
635void RadiationModel::setDiffuseSpectrum( const std::string &band_label, const std::string &spectrum_label ){
636
637 if( !doesBandExist(band_label) ){
@@ -730,7 +825,9 @@
650 radiation_bands.at(band_label).diffuse_spectrum = spectrum;
651
652}
+
653
+
654float RadiationModel::getDiffuseFlux( const std::string &band_label ) const{
655
656 if( !doesBandExist(band_label) ){
@@ -752,7 +849,9 @@
672 return radiation_bands.at(band_label).diffuseFlux;
673
674}
+
675
+
676void RadiationModel::enableLightModelVisualization(){
677 islightvisualizationenabled = true;
678
@@ -762,14 +861,18 @@
682 }
683
684}
+
685
+
686void RadiationModel::disableLightModelVisualization() {
687 islightvisualizationenabled = false;
688 for (auto &UUIDs: source_model_UUIDs){
689 context->deletePrimitive(UUIDs.second);
690 }
691}
+
692
+
693void RadiationModel::enableCameraModelVisualization(){
694 iscameravisualizationenabled = true;
695
@@ -779,13 +882,16 @@
699 }
700
701}
+
702
+
703void RadiationModel::disableCameraModelVisualization() {
704 iscameravisualizationenabled = false;
705 for (auto &UUIDs: camera_model_UUIDs){
706 context->deletePrimitive(UUIDs.second);
707 }
708}
+
709
710void RadiationModel::buildLightModelGeometry( uint sourceID ){
711
@@ -877,6 +983,7 @@
797
798}
799
+
800float RadiationModel::integrateSpectrum( uint source_ID, const std::vector<helios::vec2> &object_spectrum, float wavelength1, float wavelength2 ) const{
801
802 if( source_ID >= radiation_sources.size() ){
@@ -922,7 +1029,9 @@
842 return E/Etot;
843
844}
+
845
+
846float RadiationModel::integrateSpectrum( const std::vector<helios::vec2> &object_spectrum, float wavelength1, float wavelength2 ) const{
847
848 if( object_spectrum.size()<2 ){
@@ -957,14 +1066,18 @@
877 return E;
878
879}
+
880
+
881float RadiationModel::integrateSpectrum( const std::vector<helios::vec2> &object_spectrum) const{
882 float wavelength1 = object_spectrum.at(0).x;
883 float wavelength2 = object_spectrum.at(object_spectrum.size()-1).x;
884 float E = RadiationModel::integrateSpectrum(object_spectrum, wavelength1, wavelength2 );
885 return E;
886}
+
887
+
888float RadiationModel::integrateSpectrum(uint source_ID, const std::vector<helios::vec2> &object_spectrum, const std::vector<helios::vec2> &camera_spectrum ) const{
889
890 if( source_ID >= radiation_sources.size() ){
@@ -1004,7 +1117,9 @@
924 return E/Etot;
925
926}
+
927
+
928float RadiationModel::integrateSpectrum( const std::vector<helios::vec2> &object_spectrum, const std::vector<helios::vec2> &camera_spectrum ) const{
929
930 if( object_spectrum.size()<2 ) {
@@ -1039,7 +1154,9 @@
959 return E/Etot;
960
961}
+
962
+
963float RadiationModel::integrateSourceSpectrum( uint source_ID, float wavelength1, float wavelength2 ) const{
964
965 if( source_ID >= radiation_sources.size() ){
@@ -1051,7 +1168,9 @@
971 return integrateSpectrum( radiation_sources.at(source_ID).source_spectrum, wavelength1, wavelength2 );
972
973}
+
974
+
975void RadiationModel::scaleSpectrum( const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor ) const{
976
977 std::vector<vec2> spectrum = loadSpectralData( existing_global_data_label );
@@ -1063,7 +1182,9 @@
983 context->setGlobalData( new_global_data_label.c_str(), HELIOS_TYPE_VEC2, spectrum.size(), &spectrum.at(0) );
984
985}
+
986
+
987void RadiationModel::scaleSpectrum( const std::string &global_data_label, float scale_factor ) const{
988
989 std::vector<vec2> spectrum = loadSpectralData( global_data_label );
@@ -1075,14 +1196,18 @@
995 context->setGlobalData( global_data_label.c_str(), HELIOS_TYPE_VEC2, spectrum.size(), &spectrum.at(0) );
996
997}
+
998
+
999void RadiationModel::scaleSpectrumRandomly( const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor ) const{
1000
1001 scaleSpectrum( existing_global_data_label, new_global_data_label, context->randu(minimum_scale_factor,maximum_scale_factor) );
1002
1003}
+
1004
1005
+
1006void RadiationModel::blendSpectra( const std::string &new_spectrum_label, const std::vector<std::string> &spectrum_labels, const std::vector<float> &weights ) const{
1007
1008 if( spectrum_labels.size() != weights.size() ){
@@ -1161,7 +1286,9 @@
1081 context->setGlobalData( new_spectrum_label.c_str(), HELIOS_TYPE_VEC2, new_spectrum.size(), &new_spectrum.front() );
1082
1083}
+
1084
+
1085void RadiationModel::blendSpectraRandomly( const std::string &new_spectrum_label, const std::vector<std::string> &spectrum_labels ) const{
1086
1087 std::vector<float> weights;
@@ -1177,7 +1304,9 @@
1097 blendSpectra( new_spectrum_label, spectrum_labels, weights );
1098
1099}
+
1100
+
1101void RadiationModel::setSourcePosition( uint source_ID, const vec3 &position ){
1102
1103 if( source_ID >= radiation_sources.size() ){
@@ -1197,18 +1326,24 @@
1117 }
1118
1119}
+
1120
+
1121void RadiationModel::setSourcePosition( uint source_ID, const SphericalCoord &position ) {
1122 setSourcePosition( source_ID, sphere2cart(position) );
1123}
+
1124
+
1125helios::vec3 RadiationModel::getSourcePosition( uint source_ID )const {
1126 if( source_ID >= radiation_sources.size() ){
1127 helios_runtime_error("ERROR (RadiationModel::getSourcePosition): Source ID does not exist.");
1128 }
1129 return radiation_sources.at(source_ID).source_position;
1130}
+
1131
+
1132void RadiationModel::setScatteringDepth( const std::string &label, uint depth ){
1133
1134 if( !doesBandExist(label) ){
@@ -1217,7 +1352,9 @@
1137 radiation_bands.at(label).scatteringDepth = depth;
1138
1139}
+
1140
+
1141void RadiationModel::setMinScatterEnergy(const std::string &label, uint energy ){
1142
1143 if( !doesBandExist(label) ){
@@ -1226,7 +1363,9 @@
1146 radiation_bands.at(label).minScatterEnergy = energy;
1147
1148}
+
1149
+
1150void RadiationModel::enforcePeriodicBoundary(const std::string &boundary ){
1151
1152 if( boundary=="x" ){
@@ -1249,7 +1388,9 @@
1169 }
1170
1171}
+
1172
+
1173void RadiationModel::addRadiationCamera(const std::string &camera_label, const std::vector<std::string> &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples) {
1174
1175 if( camera_properties.FOV_aspect_ratio<=0 ){
@@ -1279,14 +1420,18 @@
1199 }
1200
1201}
+
1202
+
1203void RadiationModel::addRadiationCamera(const std::string &camera_label, const std::vector<std::string> &band_label, const helios::vec3 &position, const helios::SphericalCoord &viewing_direction, const CameraProperties &camera_properties, uint antialiasing_samples) {
1204
1205 vec3 lookat = position + sphere2cart(viewing_direction);
1206 addRadiationCamera( camera_label, band_label, position, lookat, camera_properties, antialiasing_samples );
1207
1208}
+
1209
+
1210void RadiationModel::setCameraSpectralResponse( const std::string &camera_label, const std::string &band_label, const std::string &global_data ){
1211 if(cameras.find(camera_label) == cameras.end() ){
1212 helios_runtime_error("ERROR (setCameraSpectralResponse): Camera '" + camera_label + "' does not exist.");
@@ -1297,7 +1442,9 @@
1217 cameras.at(camera_label).band_spectral_response[band_label] = global_data;
1218
1219}
+
1220
+
1221void RadiationModel::setCameraPosition( const std::string &camera_label, const helios::vec3& position ){
1222 if(cameras.find(camera_label) == cameras.end() ){
1223 helios_runtime_error("ERROR (RadiationModel::setCameraPosition): Camera '" + camera_label + "' does not exist.");
@@ -1312,7 +1459,9 @@
1232 }
1233
1234}
+
1235
+
1236helios::vec3 RadiationModel::getCameraPosition(const std::string &camera_label) const{
1237
1238 if(cameras.find(camera_label) == cameras.end() ){
@@ -1322,7 +1471,9 @@
1242 return cameras.at(camera_label).position;
1243
1244}
+
1245
+
1246void RadiationModel::setCameraLookat( const std::string &camera_label, const helios::vec3& lookat ){
1247 if(cameras.find(camera_label) == cameras.end() ){
1248 helios_runtime_error("ERROR (RadiationModel::setCameraLookat): Camera '" + camera_label + "' does not exist.");
@@ -1335,7 +1486,9 @@
1255 }
1256
1257}
+
1258
+
1259helios::vec3 RadiationModel::getCameraLookat(const std::string &camera_label) const{
1260
1261 if(cameras.find(camera_label) == cameras.end() ){
@@ -1345,7 +1498,9 @@
1265 return cameras.at(camera_label).lookat;
1266
1267}
+
1268
+
1269void RadiationModel::setCameraOrientation( const std::string &camera_label, const helios::vec3& direction ){
1270 if(cameras.find(camera_label) == cameras.end() ){
1271 helios_runtime_error("ERROR (RadiationModel::setCameraOrientation): Camera '" + camera_label + "' does not exist.");
@@ -1358,7 +1513,9 @@
1278 }
1279
1280}
+
1281
+
1282helios::SphericalCoord RadiationModel::getCameraOrientation(const std::string &camera_label) const{
1283
1284 if(cameras.find(camera_label) == cameras.end() ){
@@ -1368,7 +1525,9 @@
1288 return cart2sphere(cameras.at(camera_label).lookat - cameras.at(camera_label).position);
1289
1290}
+
1291
+
1292void RadiationModel::setCameraOrientation( const std::string &camera_label, const helios::SphericalCoord& direction ){
1293 if(cameras.find(camera_label) == cameras.end() ){
1294 helios_runtime_error("ERROR (RadiationModel::setCameraOrientation): Camera '" + camera_label + "' does not exist.");
@@ -1381,7 +1540,9 @@
1301 }
1302
1303}
+
1304
+
1305std::vector<std::string> RadiationModel::getAllCameraLabels(){
1306 std::vector<std::string> labels(cameras.size());
1307 uint cam=0;
@@ -1391,7 +1552,9 @@
1311 }
1312 return labels;
1313}
+
1314
+
1315void RadiationModel::writeCameraImage(const std::string &camera, const std::vector<std::string> &bands, const std::string &imagefile_base, const std::string &image_path, int frame, float flux_to_pixel_conversion) {
1316
1317 //check if camera exists
@@ -1477,7 +1640,9 @@
1397 writeJPEG( outfile.str(), camera_resolution.x, camera_resolution.y, pixel_data );
1398
1399}
+
1400
+
1401void RadiationModel::writeNormCameraImage(const std::string &camera, const std::vector<std::string> &bands, const std::string &imagefile_base, const std::string &image_path, int frame){
1402 float maxval = 0;
1403 // Find maximum mean value over all bands
@@ -1511,7 +1676,9 @@
1431
1432 RadiationModel::writeCameraImage(camera, bands, imagefile_base, image_path, frame);
1433}
+
1434
+
1435void RadiationModel::writeCameraImageData(const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path, int frame){
1436
1437 //check if camera exists
@@ -1577,6 +1744,7 @@
1497 outfilestream.close();
1498
1499}
+
1500
1501void RadiationModel::initializeOptiX() {
1502
@@ -2062,10 +2230,13 @@
1982
1983}
1984
+
1988
+
1989void RadiationModel::updateGeometry( const std::vector<uint>& UUIDs ){
1990
1991 if( message_flag ){
@@ -2566,6 +2737,7 @@
2486 }
2487
2488}
+
2489
2490void RadiationModel::updateRadiativeProperties( const std::vector<std::string> &labels ) {
2491
@@ -3194,11 +3366,14 @@
3114
3115}
3116
+
3117void RadiationModel::runBand( const std::string &label ) {
3118 std::vector<std::string> labels{label};
3119 runBand(labels);
3120}
+
3121
+
3122void RadiationModel::runBand( const std::vector<std::string> &label ) {
3123
3124 //----- VERIFICATIONS -----//
@@ -3804,7 +3979,9 @@
3724 }
3725
3726}
+
3727
+
3728float RadiationModel::getSkyEnergy() {
3729
3730 std::vector<float> Rsky_SW;
@@ -3816,7 +3993,9 @@
3736 return Rsky;
3737
3738}
+
3739
+
3740std::vector<float> RadiationModel::getTotalAbsorbedFlux() {
3741
3742 std::vector<float> total_flux;
@@ -3843,6 +4022,7 @@
3763 return total_flux;
3764
3765}
+
3766
3767std::vector<float> RadiationModel::getOptiXbufferData( RTbuffer buffer ){
3768
@@ -4916,6 +5096,7 @@
4836
4837}
4838
+
4839float RadiationModel::calculateGtheta(helios::Context* context, vec3 view_direction ){
4840
4841 vec3 dir = view_direction;
@@ -4939,12 +5120,14 @@
4859 return Gtheta/total_area;
4860
4861}
+
4862
4863void RadiationModel::setCameraCalibration(CameraCalibration *CameraCalibration){
4864 cameracalibration = CameraCalibration;
4865 calibration_flag = true;
4866}
4867
+
4868void RadiationModel::updateCameraResponse(const std::string &orginalcameralabel, const std::vector<std::string> &sourcelabels_raw,
4869 const std::vector<std::string>& cameraresponselabels, vec2 &wavelengthrange,
4870 const std::vector<std::vector<float>> &truevalues, const std::string &calibratedmark) {
@@ -5061,7 +5244,9 @@
4981 context->setPrimitiveData(UUID, "reflectivity_spectrum", colorboardspectra+"_raw");
4982 }
4983}
+
4984
+
4985void RadiationModel::runRadiationImaging(const std::string& cameralabel, const std::vector<std::string>& sourcelabels, const std::vector<std::string>& bandlabels,
4986 const std::vector<std::string>& cameraresponselabels, helios::vec2 wavelengthrange,
4987 float fluxscale, float diffusefactor, uint scatteringdepth){
@@ -5102,7 +5287,9 @@
5022 RadiationModel::updateGeometry();
5023 RadiationModel::runBand(bandlabels);
5024}
+
5025
+
5026void RadiationModel::runRadiationImaging(const std::vector<std::string>& cameralabels, const std::vector<std::string>& sourcelabels, const std::vector<std::string>& bandlabels,
5027 const std::vector<std::string>& cameraresponselabels, helios::vec2 wavelengthrange,
5028 float fluxscale, float diffusefactor, uint scatteringdepth){
@@ -5146,7 +5333,9 @@
5066 RadiationModel::updateGeometry();
5067 RadiationModel::runBand(bandlabels);
5068}
+
5069
+
5070float RadiationModel::getCameraResponseScale(const std::string &orginalcameralabel, const std::vector<std::string>& cameraresponselabels,
5071 const std::vector<std::string>& bandlabels, const std::vector<std::string> &sourcelabels,
5072 vec2 &wavelengthrange, const std::vector<std::vector<float>> &truevalues){
@@ -5168,8 +5357,10 @@
5088 float camerascale = cameracalibration->getCameraResponseScale(cameralabel, cameraproperties.camera_resolution, bandlabels, truevalues);
5089 return camerascale;
5090}
+
5091
5092
+
5093void RadiationModel::writePrimitiveDataLabelMap(const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path, int frame, float padvalue){
5094
5095 if( cameras.find(cameralabel)==cameras.end() ){
@@ -5260,7 +5451,9 @@
5180 }
5181
5182}
+
5183
+
5184void RadiationModel::writeObjectDataLabelMap(const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path, int frame, float padvalue){
5185
5186 if( cameras.find(cameralabel)==cameras.end() ){
@@ -5352,7 +5545,9 @@
5272 }
5273
5274}
+
5275
+
5276void RadiationModel::writeDepthImageData(const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path, int frame) {
5277
5278 if( cameras.find(cameralabel)==cameras.end() ){
@@ -5408,7 +5603,9 @@
5328 pixel_data.close();
5329
5330}
+
5331
+
5332void RadiationModel::writeNormDepthImage(const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path, int frame){
5333
5334 if( cameras.find(cameralabel)==cameras.end() ){
@@ -5478,8 +5675,10 @@
5398 writeJPEG( outfile.str(), camera_resolution.x, camera_resolution.y, pixel_data );
5399
5400}
+
5401
5402
+
5403void RadiationModel::writeImageBoundingBoxes(const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path, bool append_label_file, int frame){
5404
5405 if( cameras.find(cameralabel)==cameras.end() ){
@@ -5579,8 +5778,8 @@
5499 if( bbox.x==bbox.y || bbox.z==bbox.w ){ //filter boxes of zeros size
5500 continue;
5501 }
-
5502 label_file << object_class_ID << " " << (bbox.x + 0.5 * (bbox.y - bbox.x)) / float(camera_resolution.x) << " "
-
5503 << (bbox.z + 0.5 * (bbox.w - bbox.z)) / float(camera_resolution.y) << " " << std::setprecision(6)
+
5502 label_file << object_class_ID << " " << (bbox.x + 0.5 * (bbox.y - bbox.x)) / float(camera_resolution.x) << " "
+
5503 << (bbox.z + 0.5 * (bbox.w - bbox.z)) / float(camera_resolution.y) << " " << std::setprecision(6)
5504 << std::fixed << (bbox.y - bbox.x) / float(camera_resolution.x) << " "
5505 << (bbox.w - bbox.z) / float(camera_resolution.y) << std::endl;
5506 }
@@ -5588,7 +5787,9 @@
5508 label_file.close();
5509
5510}
+
5511
+
5512void RadiationModel::writeImageBoundingBoxes_ObjectData(const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path, bool append_label_file, int frame){
5513
5514 if( cameras.find(cameralabel)==cameras.end() ){
@@ -5696,8 +5897,8 @@
5616 if( bbox.x==bbox.y || bbox.z==bbox.w ){ //filter boxes of zeros size
5617 continue;
5618 }
-
5619 label_file << object_class_ID << " " << (bbox.x + 0.5 * (bbox.y - bbox.x)) / float(camera_resolution.x) << " "
-
5620 << (bbox.z + 0.5 * (bbox.w - bbox.z)) / float(camera_resolution.y) << " " << std::setprecision(6)
+
5619 label_file << object_class_ID << " " << (bbox.x + 0.5 * (bbox.y - bbox.x)) / float(camera_resolution.x) << " "
+
5620 << (bbox.z + 0.5 * (bbox.w - bbox.z)) / float(camera_resolution.y) << " " << std::setprecision(6)
5621 << std::fixed << (bbox.y - bbox.x) / float(camera_resolution.x) << " "
5622 << (bbox.w - bbox.z) / float(camera_resolution.y) << std::endl;
5623 }
@@ -5705,8 +5906,10 @@
5625 label_file.close();
5626
5627}
+
5628
5629
+
5630void RadiationModel::setPadValue(const std::string &cameralabel, const std::vector<std::string> &bandlabels, const std::vector<float> &padvalues) {
5631 for (uint b = 0; b < bandlabels.size(); b++) {
5632 std::string bandlabel = bandlabels.at(b);
@@ -5728,7 +5931,9 @@
5648 context->setGlobalData(image_value_label.c_str(), HELIOS_TYPE_FLOAT, cameradata.size(), &cameradata[0]);
5649 }
5650}
+
5651
+
5652void RadiationModel::calibrateCamera(const std::string &originalcameralabel, const std::vector<std::string> &sourcelabels,
5653 const std::vector<std::string>& cameraresplabels_raw, const std::vector<std::string> &bandlabels, const float scalefactor,
5654 const std::vector<std::vector<float>> &truevalues, const std::string &calibratedmark) {
@@ -5767,7 +5972,9 @@
5687 cameracalibration->writeCalibratedCameraResponses(cameraresplabels_raw, calibratedmark, camerascale*scalefactor);
5688
5689}
+
5690
+
5691void RadiationModel::calibrateCamera(const std::string &originalcameralabel, const float scalefactor, const std::vector<std::vector<float>> &truevalues,
5692 const std::string &calibratedmark) {
5693
@@ -5824,6 +6031,7 @@
5744 cameracalibration->writeCalibratedCameraResponses(cameraresplabels_raw, calibratedmark, camerascale*scalefactor);
5745
5746}
+
5747
5748std::vector<helios::vec2> RadiationModel::generateGaussianCameraResponse(float FWHM, float mu, float centrawavelength, const helios::int2 &wavebanrange){
5749
@@ -5868,199 +6076,200 @@
5788 }
5789#endif
5790}
-
helios::HeliosDataType
HeliosDataType
Data types.
Definition: Context.h:41
-
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition: Context.h:49
-
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition: Context.h:51
-
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition: Context.h:43
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
-
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition: Context.h:31
-
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition: Context.h:33
-
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition: Context.h:37
-
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition: Context.h:35
-
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition: Context.h:130
+
helios::HeliosDataType
HeliosDataType
Data types.
Definition Context.h:41
+
helios::HELIOS_TYPE_DOUBLE
@ HELIOS_TYPE_DOUBLE
double data type
Definition Context.h:49
+
helios::HELIOS_TYPE_VEC2
@ HELIOS_TYPE_VEC2
helios::vec2 data type
Definition Context.h:51
+
helios::HELIOS_TYPE_INT
@ HELIOS_TYPE_INT
integer data type
Definition Context.h:43
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
+
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition Context.h:31
+
helios::PRIMITIVE_TYPE_PATCH
@ PRIMITIVE_TYPE_PATCH
< Rectangular primitive
Definition Context.h:33
+
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition Context.h:37
+
helios::PRIMITIVE_TYPE_TRIANGLE
@ PRIMITIVE_TYPE_TRIANGLE
< Triangular primitive
Definition Context.h:35
+
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition Context.h:130
-
RadiationModel::getCameraOrientation
helios::SphericalCoord getCameraOrientation(const std::string &camera_label) const
Get the orientation of the radiation camera based on a spherical coordinate.
Definition: RadiationModel.cpp:1282
-
RadiationModel::setSourceSpectrumIntegral
void setSourceSpectrumIntegral(uint source_ID, float source_integral)
Set the integral of the source spectral flux distribution across all possible wavelengths (=∫Sdλ)
Definition: RadiationModel.cpp:482
-
RadiationModel::deleteRadiationSource
void deleteRadiationSource(uint sourceID)
Delete an existing radiation source (any type)
Definition: RadiationModel.cpp:472
-
RadiationModel::calculateGtheta
float calculateGtheta(helios::Context *context, helios::vec3 view_direction)
Calculate G(theta) (i.e., projected area fraction) for a group of primitives given a certain viewing ...
Definition: RadiationModel.cpp:4839
-
RadiationModel::disableMessages
void disableMessages()
Disable/silence status messages.
Definition: RadiationModel.cpp:65
-
RadiationModel::setCameraSpectralResponse
void setCameraSpectralResponse(const std::string &camera_label, const std::string &band_label, const std::string &global_data)
Set the spectral response of a camera band based on reference to global data. This function version u...
Definition: RadiationModel.cpp:1210
-
RadiationModel::setSourceFlux
void setSourceFlux(uint source_ID, const std::string &band_label, float flux)
Set the flux of radiation source for this band.
Definition: RadiationModel.cpp:519
-
RadiationModel::setCameraOrientation
void setCameraOrientation(const std::string &camera_label, const helios::vec3 &direction)
Set the orientation of the radiation camera based on a Cartesian vector.
Definition: RadiationModel.cpp:1269
-
RadiationModel::scaleSpectrum
void scaleSpectrum(const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor) const
Scale an entire spectrum by a constant factor. Creates new global data for scaled spectrum.
Definition: RadiationModel.cpp:975
-
RadiationModel::blendSpectraRandomly
void blendSpectraRandomly(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels) const
Blend one or more spectra together into a new spectrum, with random weights assigned to each input sp...
Definition: RadiationModel.cpp:1085
-
RadiationModel::blendSpectra
void blendSpectra(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels, const std::vector< float > &weights) const
Blend one or more spectra together into a new spectrum.
Definition: RadiationModel.cpp:1006
-
RadiationModel::addSphereRadiationSource
uint addSphereRadiationSource(const helios::vec3 &position, float radius)
Add an external source of radiation that emits from the surface of a sphere.
Definition: RadiationModel.cpp:343
-
RadiationModel::enforcePeriodicBoundary
void enforcePeriodicBoundary(const std::string &boundary)
Use a periodic boundary condition in one or more lateral directions.
Definition: RadiationModel.cpp:1150
-
RadiationModel::getAllCameraLabels
std::vector< std::string > getAllCameraLabels()
Get the labels for all radiation cameras that have been added to the radiation model.
Definition: RadiationModel.cpp:1305
-
RadiationModel::integrateSpectrum
float integrateSpectrum(const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
Integrate a spectral distribution between two wavelength bounds.
Definition: RadiationModel.cpp:846
-
RadiationModel::setDirectRayCount
void setDirectRayCount(const std::string &label, size_t N)
Sets variable directRayCount, the number of rays to be used in direct radiation model.
Definition: RadiationModel.cpp:83
-
RadiationModel::copyRadiationBand
void copyRadiationBand(const std::string &old_label, const std::string &new_label)
Copy a spectral radiation band based on a previously created band.
Definition: RadiationModel.cpp:241
-
RadiationModel::writeCameraImageData
void writeCameraImageData(const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write camera data for one band to an ASCII text file.
Definition: RadiationModel.cpp:1435
-
RadiationModel::writeImageBoundingBoxes
void writeImageBoundingBoxes(const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on primitive data labels (Ultralytic's YOLO format). Primitive data must h...
Definition: RadiationModel.cpp:5403
-
RadiationModel::enableLightModelVisualization
void enableLightModelVisualization()
Add a 3D model of the light source (rectangular, disk, and sphere) to the Context for visualization p...
Definition: RadiationModel.cpp:676
-
RadiationModel::getTotalAbsorbedFlux
std::vector< float > getTotalAbsorbedFlux()
Get the total absorbed radiation flux summed over all bands for each primitive.
Definition: RadiationModel.cpp:3740
-
RadiationModel::writeNormCameraImage
void writeNormCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write normalized camera data (maximum value is 1) for one or more bands to a JPEG image.
Definition: RadiationModel.cpp:1401
-
RadiationModel::writeNormDepthImage
void writeNormDepthImage(const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path="./", int frame=-1)
Write depth image file, with grayscale normalized to the minimum and maximum depth values.
Definition: RadiationModel.cpp:5332
-
RadiationModel::getCameraPosition
helios::vec3 getCameraPosition(const std::string &camera_label) const
Get the position of the radiation camera.
Definition: RadiationModel.cpp:1236
-
RadiationModel::setMinScatterEnergy
void setMinScatterEnergy(const std::string &label, uint energy)
Set the energy threshold used to terminate scattering iterations. Scattering iterations are terminate...
Definition: RadiationModel.cpp:1141
-
RadiationModel::getCameraLookat
helios::vec3 getCameraLookat(const std::string &camera_label) const
Get the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition: RadiationModel.cpp:1259
-
RadiationModel::disableCameraModelVisualization
void disableCameraModelVisualization()
Remove the 3D model of the camera from the Context.
Definition: RadiationModel.cpp:703
-
RadiationModel::setDiffuseSpectrumIntegral
void setDiffuseSpectrumIntegral(float spectrum_integral)
Set the integral of the diffuse spectral flux distribution across all possible wavelengths FOR ALL EX...
Definition: RadiationModel.cpp:143
-
RadiationModel::setScatteringDepth
void setScatteringDepth(const std::string &label, uint depth)
Set the number of scattering iterations for a certain band.
Definition: RadiationModel.cpp:1132
-
RadiationModel::runRadiationImaging
void runRadiationImaging(const std::string &cameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
Run radiation imaging simulation.
Definition: RadiationModel.cpp:4985
-
RadiationModel::setPadValue
void setPadValue(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const std::vector< float > &padvalues)
Set padding value for pixels do not have valid values.
Definition: RadiationModel.cpp:5630
-
RadiationModel::disableEmission
void disableEmission(const std::string &label)
Disable emission calculations for all primitives in this band.
Definition: RadiationModel.cpp:279
-
RadiationModel::writePrimitiveDataLabelMap
void writePrimitiveDataLabelMap(const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on primitive data. Primitive data must have type 'float',...
Definition: RadiationModel.cpp:5093
-
RadiationModel::setSourceSpectrum
void setSourceSpectrum(uint source_ID, const std::vector< helios::vec2 > &spectrum)
Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pai...
Definition: RadiationModel.cpp:567
-
RadiationModel::enableEmission
void enableEmission(const std::string &label)
Enable emission calculations for all primitives in this band.
Definition: RadiationModel.cpp:289
-
RadiationModel::runBand
void runBand(const std::string &label)
Run the simulation for a single radiative band.
Definition: RadiationModel.cpp:3117
-
RadiationModel::setCameraLookat
void setCameraLookat(const std::string &camera_label, const helios::vec3 &lookat)
Set the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition: RadiationModel.cpp:1246
-
RadiationModel::addSunSphereRadiationSource
uint addSunSphereRadiationSource()
Add a sphere radiation source that models the sun assuming the default direction of (0,...
Definition: RadiationModel.cpp:373
-
RadiationModel::addDiskRadiationSource
uint addDiskRadiationSource(const helios::vec3 &position, float radius, const helios::vec3 &rotation)
Add planar circular radiation source.
Definition: RadiationModel.cpp:441
-
RadiationModel::doesBandExist
bool doesBandExist(const std::string &label) const
Check if a radiation band exists based on its label.
Definition: RadiationModel.cpp:271
-
RadiationModel::getSkyEnergy
float getSkyEnergy()
Get the radiative energy lost to the sky (surroundings)
Definition: RadiationModel.cpp:3728
-
RadiationModel::getSourceFlux
float getSourceFlux(uint source_ID, const std::string &band_label) const
Get the flux of radiation source for this band.
Definition: RadiationModel.cpp:541
-
RadiationModel::setCameraPosition
void setCameraPosition(const std::string &camera_label, const helios::vec3 &position)
Set the position of the radiation camera.
Definition: RadiationModel.cpp:1221
-
RadiationModel::setSourcePosition
void setSourcePosition(uint source_ID, const helios::vec3 &position)
Set the position/direction of radiation source based on a Cartesian vector.
Definition: RadiationModel.cpp:1101
-
RadiationModel::writeCameraImage
void writeCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float flux_to_pixel_conversion=1.f)
Write camera data for one or more bands to a JPEG image.
Definition: RadiationModel.cpp:1315
-
RadiationModel::setDiffuseRadiationFlux
void setDiffuseRadiationFlux(const std::string &label, float flux)
Diffuse (ambient) radiation flux.
Definition: RadiationModel.cpp:97
-
RadiationModel::calibrateCamera
void calibrateCamera(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Calibrate camera.
Definition: RadiationModel.cpp:5652
-
RadiationModel::setDiffuseRayCount
void setDiffuseRayCount(const std::string &label, size_t N)
Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
Definition: RadiationModel.cpp:90
-
RadiationModel::getSourcePosition
helios::vec3 getSourcePosition(uint source_ID) const
Get the position/direction of radiation source.
Definition: RadiationModel.cpp:1125
-
RadiationModel::addRectangleRadiationSource
uint addRectangleRadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
Add planar rectangular radiation source.
Definition: RadiationModel.cpp:411
-
RadiationModel::enableMessages
void enableMessages()
Enable status messages.
Definition: RadiationModel.cpp:69
-
RadiationModel::disableLightModelVisualization
void disableLightModelVisualization()
Remove the 3D model of the light source from the Context.
Definition: RadiationModel.cpp:686
-
RadiationModel::scaleSpectrumRandomly
void scaleSpectrumRandomly(const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor) const
Scale an entire spectrum by a random factor following a uniform distribution.
Definition: RadiationModel.cpp:999
-
RadiationModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: RadiationModel.cpp:73
-
RadiationModel::writeImageBoundingBoxes_ObjectData
void writeImageBoundingBoxes_ObjectData(const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on object data labels (Ultralytic's YOLO format). Object data must have ty...
Definition: RadiationModel.cpp:5512
-
RadiationModel::setDiffuseRadiationExtinctionCoeff
void setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const helios::vec3 &peak_dir)
Extinction coefficient of diffuse ambient radiation.
Definition: RadiationModel.cpp:108
-
RadiationModel::updateGeometry
void updateGeometry()
Adds all geometric primitives from the Context to OptiX.
Definition: RadiationModel.cpp:1985
-
RadiationModel::RadiationModel
RadiationModel(helios::Context *context)
Default constructor.
Definition: RadiationModel.cpp:20
-
RadiationModel::addRadiationBand
void addRadiationBand(const std::string &label)
Add a spectral radiation band to the model.
Definition: RadiationModel.cpp:194
-
RadiationModel::enableCameraModelVisualization
void enableCameraModelVisualization()
Add a 3D model of the camera to the Context for visualization purposes.
Definition: RadiationModel.cpp:693
-
RadiationModel::writeDepthImageData
void writeDepthImageData(const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write depth image data to text file.
Definition: RadiationModel.cpp:5276
-
RadiationModel::getCameraResponseScale
float getCameraResponseScale(const std::string &orginalcameralabel, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &sourcelabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues)
Get the scale factor of the camera response for a given camera.
Definition: RadiationModel.cpp:5070
-
RadiationModel::addCollimatedRadiationSource
uint addCollimatedRadiationSource()
Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)...
Definition: RadiationModel.cpp:299
-
RadiationModel::~RadiationModel
~RadiationModel()
Destructor.
Definition: RadiationModel.cpp:61
-
RadiationModel::addRadiationCamera
void addRadiationCamera(const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
Add a radiation camera sensor.
Definition: RadiationModel.cpp:1173
-
RadiationModel::setDiffuseSpectrum
void setDiffuseSpectrum(const std::string &spectrum_label)
Set the spectral distribution of diffuse ambient radiation FOR ALL BANDS based on global data of wave...
Definition: RadiationModel.cpp:618
-
RadiationModel::getDiffuseFlux
float getDiffuseFlux(const std::string &band_label) const
Get the diffuse flux for a given band.
Definition: RadiationModel.cpp:654
-
RadiationModel::updateCameraResponse
void updateCameraResponse(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels_raw, const std::vector< std::string > &cameraresponselabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Update the camera response for a given camera based on color board.
Definition: RadiationModel.cpp:4868
-
RadiationModel::integrateSourceSpectrum
float integrateSourceSpectrum(uint source_ID, float wavelength1, float wavelength2) const
Integrate a source spectral distribution between two wavelength bounds.
Definition: RadiationModel.cpp:963
-
RadiationModel::writeObjectDataLabelMap
void writeObjectDataLabelMap(const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on object data. Object data must have type 'float',...
Definition: RadiationModel.cpp:5184
-
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2247
-
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition: Context.cpp:2503
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveTransformationMatrix
void getPrimitiveTransformationMatrix(uint UUID, float(&T)[16]) const
Method to return the Affine transformation matrix of a Primitive.
Definition: Context.cpp:7108
-
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition: Context_fileIO.cpp:1217
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:2983
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition: Context.cpp:2589
-
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition: Context_data.cpp:2815
-
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition: Context.cpp:2116
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition: Context.cpp:7179
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition: Context_data.cpp:4533
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition: Context.cpp:1741
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition: Context_fileIO.cpp:3742
-
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Context.cpp:2046
-
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition: Context_data.cpp:4502
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition: Context.cpp:7187
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition: Context_data.cpp:3844
-
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition: Context.cpp:1491
-
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition: Context.cpp:7104
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition: Context.cpp:1750
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition: Context.cpp:3312
-
helios::Context::scanXMLForTag
static bool scanXMLForTag(const std::string &filename, const std::string &tag, const std::string &label="")
Scan a Helios XML file to check if a tag exists.
Definition: Context_fileIO.cpp:2403
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:2969
-
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition: Context.cpp:3343
-
helios::Tile::getVertices
std::vector< helios::vec3 > getVertices() const
Get the Cartesian coordinates of each of the four corners of the tile object.
Definition: Context.cpp:3352
-
helios::interp1
float interp1(const std::vector< helios::vec2 > &points, float x)
Function to perform linear interpolation based on a vector of discrete (x,y) values.
Definition: global.cpp:3022
-
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition: global.cpp:3102
-
helios::getFileName
std::string getFileName(const std::string &filepath)
Parse a file string to get the filename including extension.
Definition: global.cpp:3085
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::writeJPEG
void writeJPEG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBcolor > &pixel_data)
Function to write a JPEG image based on pixel data.
Definition: global.cpp:1868
-
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition: global.cpp:1943
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition: global.cpp:1069
-
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition: Context.cpp:1759
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_vec4
vec4 make_vec4(float x, float y, float z, float w)
Make a vec4 from three floats.
Definition: helios_vector_types.h:763
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
CameraCalibration
Camera calibration structure used for camera calibration tasks.
Definition: CameraCalibration.h:21
-
CameraCalibration::writeCalibratedCameraResponses
void writeCalibratedCameraResponses(const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
Write calibrated camera response spectra.
Definition: CameraCalibration.cpp:366
-
CameraCalibration::getCameraResponseScale
float getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
Get camera spectral response scale.
Definition: CameraCalibration.cpp:599
-
CameraCalibration::addDefaultColorboard
std::vector< uint > addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
Set reflectivity for a specific UUID.
Definition: CameraCalibration.cpp:152
-
CameraCalibration::preprocessSpectra
void preprocessSpectra(const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
Preprocess all spectra for modelling.
Definition: CameraCalibration.cpp:476
-
CameraCalibration::updateCameraResponseSpectra
std::vector< float > updateCameraResponseSpectra(const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
Update camera response spectra.
Definition: CameraCalibration.cpp:294
-
CameraProperties
Properties defining a radiation camera.
Definition: RadiationModel.h:31
-
CameraProperties::camera_resolution
helios::int2 camera_resolution
Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (....
Definition: RadiationModel.h:38
-
CameraProperties::focal_plane_distance
float focal_plane_distance
Distance from the viewing plane to the focal plane.
Definition: RadiationModel.h:41
-
CameraProperties::HFOV
float HFOV
Camera horizontal field of view in degrees.
Definition: RadiationModel.h:47
-
CameraProperties::lens_diameter
float lens_diameter
Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
Definition: RadiationModel.h:44
-
CameraProperties::FOV_aspect_ratio
float FOV_aspect_ratio
Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (....
Definition: RadiationModel.h:50
-
RadiationBand
Properties defining a radiation band.
Definition: RadiationModel.h:113
-
RadiationBand::wavebandBounds
helios::vec2 wavebandBounds
Waveband range of band.
Definition: RadiationModel.h:164
-
RadiationBand::label
std::string label
Label for band.
Definition: RadiationModel.h:131
-
RadiationCamera
Data object for a radiation camera.
Definition: RadiationModel.h:70
-
RadiationSource
Radiation source data object.
Definition: RadiationModel.h:184
-
RadiationSource::source_spectrum
std::vector< helios::vec2 > source_spectrum
Spectral distribution of radiation source. Each element of the vector is a wavelength band,...
Definition: RadiationModel.h:241
-
RadiationSource::source_width
helios::vec2 source_width
Widths for each radiation source (N/A for collimated sources)
Definition: RadiationModel.h:246
-
RadiationSource::source_position
helios::vec3 source_position
Positions of radiation source.
Definition: RadiationModel.h:235
-
RadiationSource::source_flux_scaling_factor
float source_flux_scaling_factor
Source flux factors used to scale flux in case of a sun sphere source.
Definition: RadiationModel.h:252
-
RadiationSource::source_rotation
helios::vec3 source_rotation
Rotation (rx,ry,rz) for radiation source (area sources only)
Definition: RadiationModel.h:249
-
RadiationSource::source_type
RadiationSourceType source_type
Types of all radiation sources.
Definition: RadiationModel.h:255
-
RadiationSource::source_fluxes
std::map< std::string, float > source_fluxes
Fluxes of radiation source for all bands.
Definition: RadiationModel.h:258
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::scale
void scale(float scale_factor)
Scale RGBcolor by some factor.
Definition: helios_vector_types.h:910
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
-
helios::vec4
Vector of four elements of type 'float'.
Definition: helios_vector_types.h:673
-
helios::vec4::y
float y
Second element in vector.
Definition: helios_vector_types.h:679
-
helios::vec4::w
float w
Fourth element in vector.
Definition: helios_vector_types.h:683
-
helios::vec4::z
float z
Third element in vector.
Definition: helios_vector_types.h:681
-
helios::vec4::x
float x
First element in vector.
Definition: helios_vector_types.h:677
+
RadiationModel::getCameraOrientation
helios::SphericalCoord getCameraOrientation(const std::string &camera_label) const
Get the orientation of the radiation camera based on a spherical coordinate.
Definition RadiationModel.cpp:1282
+
RadiationModel::setSourceSpectrumIntegral
void setSourceSpectrumIntegral(uint source_ID, float source_integral)
Set the integral of the source spectral flux distribution across all possible wavelengths (=∫Sdλ)
Definition RadiationModel.cpp:482
+
RadiationModel::deleteRadiationSource
void deleteRadiationSource(uint sourceID)
Delete an existing radiation source (any type)
Definition RadiationModel.cpp:472
+
RadiationModel::calculateGtheta
float calculateGtheta(helios::Context *context, helios::vec3 view_direction)
Calculate G(theta) (i.e., projected area fraction) for a group of primitives given a certain viewing ...
Definition RadiationModel.cpp:4839
+
RadiationModel::disableMessages
void disableMessages()
Disable/silence status messages.
Definition RadiationModel.cpp:65
+
RadiationModel::setCameraSpectralResponse
void setCameraSpectralResponse(const std::string &camera_label, const std::string &band_label, const std::string &global_data)
Set the spectral response of a camera band based on reference to global data. This function version u...
Definition RadiationModel.cpp:1210
+
RadiationModel::setSourceFlux
void setSourceFlux(uint source_ID, const std::string &band_label, float flux)
Set the flux of radiation source for this band.
Definition RadiationModel.cpp:519
+
RadiationModel::setCameraOrientation
void setCameraOrientation(const std::string &camera_label, const helios::vec3 &direction)
Set the orientation of the radiation camera based on a Cartesian vector.
Definition RadiationModel.cpp:1269
+
RadiationModel::scaleSpectrum
void scaleSpectrum(const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor) const
Scale an entire spectrum by a constant factor. Creates new global data for scaled spectrum.
Definition RadiationModel.cpp:975
+
RadiationModel::blendSpectraRandomly
void blendSpectraRandomly(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels) const
Blend one or more spectra together into a new spectrum, with random weights assigned to each input sp...
Definition RadiationModel.cpp:1085
+
RadiationModel::blendSpectra
void blendSpectra(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels, const std::vector< float > &weights) const
Blend one or more spectra together into a new spectrum.
Definition RadiationModel.cpp:1006
+
RadiationModel::addSphereRadiationSource
uint addSphereRadiationSource(const helios::vec3 &position, float radius)
Add an external source of radiation that emits from the surface of a sphere.
Definition RadiationModel.cpp:343
+
RadiationModel::enforcePeriodicBoundary
void enforcePeriodicBoundary(const std::string &boundary)
Use a periodic boundary condition in one or more lateral directions.
Definition RadiationModel.cpp:1150
+
RadiationModel::getAllCameraLabels
std::vector< std::string > getAllCameraLabels()
Get the labels for all radiation cameras that have been added to the radiation model.
Definition RadiationModel.cpp:1305
+
RadiationModel::integrateSpectrum
float integrateSpectrum(const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
Integrate a spectral distribution between two wavelength bounds.
Definition RadiationModel.cpp:846
+
RadiationModel::setDirectRayCount
void setDirectRayCount(const std::string &label, size_t N)
Sets variable directRayCount, the number of rays to be used in direct radiation model.
Definition RadiationModel.cpp:83
+
RadiationModel::copyRadiationBand
void copyRadiationBand(const std::string &old_label, const std::string &new_label)
Copy a spectral radiation band based on a previously created band.
Definition RadiationModel.cpp:241
+
RadiationModel::writeCameraImageData
void writeCameraImageData(const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write camera data for one band to an ASCII text file.
Definition RadiationModel.cpp:1435
+
RadiationModel::writeImageBoundingBoxes
void writeImageBoundingBoxes(const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on primitive data labels (Ultralytic's YOLO format). Primitive data must h...
Definition RadiationModel.cpp:5403
+
RadiationModel::enableLightModelVisualization
void enableLightModelVisualization()
Add a 3D model of the light source (rectangular, disk, and sphere) to the Context for visualization p...
Definition RadiationModel.cpp:676
+
RadiationModel::getTotalAbsorbedFlux
std::vector< float > getTotalAbsorbedFlux()
Get the total absorbed radiation flux summed over all bands for each primitive.
Definition RadiationModel.cpp:3740
+
RadiationModel::writeNormCameraImage
void writeNormCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write normalized camera data (maximum value is 1) for one or more bands to a JPEG image.
Definition RadiationModel.cpp:1401
+
RadiationModel::writeNormDepthImage
void writeNormDepthImage(const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path="./", int frame=-1)
Write depth image file, with grayscale normalized to the minimum and maximum depth values.
Definition RadiationModel.cpp:5332
+
RadiationModel::getCameraPosition
helios::vec3 getCameraPosition(const std::string &camera_label) const
Get the position of the radiation camera.
Definition RadiationModel.cpp:1236
+
RadiationModel::setMinScatterEnergy
void setMinScatterEnergy(const std::string &label, uint energy)
Set the energy threshold used to terminate scattering iterations. Scattering iterations are terminate...
Definition RadiationModel.cpp:1141
+
RadiationModel::getCameraLookat
helios::vec3 getCameraLookat(const std::string &camera_label) const
Get the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition RadiationModel.cpp:1259
+
RadiationModel::disableCameraModelVisualization
void disableCameraModelVisualization()
Remove the 3D model of the camera from the Context.
Definition RadiationModel.cpp:703
+
RadiationModel::setDiffuseSpectrumIntegral
void setDiffuseSpectrumIntegral(float spectrum_integral)
Set the integral of the diffuse spectral flux distribution across all possible wavelengths FOR ALL EX...
Definition RadiationModel.cpp:143
+
RadiationModel::setScatteringDepth
void setScatteringDepth(const std::string &label, uint depth)
Set the number of scattering iterations for a certain band.
Definition RadiationModel.cpp:1132
+
RadiationModel::runRadiationImaging
void runRadiationImaging(const std::string &cameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
Run radiation imaging simulation.
Definition RadiationModel.cpp:4985
+
RadiationModel::setPadValue
void setPadValue(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const std::vector< float > &padvalues)
Set padding value for pixels do not have valid values.
Definition RadiationModel.cpp:5630
+
RadiationModel::disableEmission
void disableEmission(const std::string &label)
Disable emission calculations for all primitives in this band.
Definition RadiationModel.cpp:279
+
RadiationModel::writePrimitiveDataLabelMap
void writePrimitiveDataLabelMap(const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on primitive data. Primitive data must have type 'float',...
Definition RadiationModel.cpp:5093
+
RadiationModel::setSourceSpectrum
void setSourceSpectrum(uint source_ID, const std::vector< helios::vec2 > &spectrum)
Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pai...
Definition RadiationModel.cpp:567
+
RadiationModel::enableEmission
void enableEmission(const std::string &label)
Enable emission calculations for all primitives in this band.
Definition RadiationModel.cpp:289
+
RadiationModel::runBand
void runBand(const std::string &label)
Run the simulation for a single radiative band.
Definition RadiationModel.cpp:3117
+
RadiationModel::setCameraLookat
void setCameraLookat(const std::string &camera_label, const helios::vec3 &lookat)
Set the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition RadiationModel.cpp:1246
+
RadiationModel::addSunSphereRadiationSource
uint addSunSphereRadiationSource()
Add a sphere radiation source that models the sun assuming the default direction of (0,...
Definition RadiationModel.cpp:373
+
RadiationModel::addDiskRadiationSource
uint addDiskRadiationSource(const helios::vec3 &position, float radius, const helios::vec3 &rotation)
Add planar circular radiation source.
Definition RadiationModel.cpp:441
+
RadiationModel::doesBandExist
bool doesBandExist(const std::string &label) const
Check if a radiation band exists based on its label.
Definition RadiationModel.cpp:271
+
RadiationModel::getSkyEnergy
float getSkyEnergy()
Get the radiative energy lost to the sky (surroundings)
Definition RadiationModel.cpp:3728
+
RadiationModel::getSourceFlux
float getSourceFlux(uint source_ID, const std::string &band_label) const
Get the flux of radiation source for this band.
Definition RadiationModel.cpp:541
+
RadiationModel::setCameraPosition
void setCameraPosition(const std::string &camera_label, const helios::vec3 &position)
Set the position of the radiation camera.
Definition RadiationModel.cpp:1221
+
RadiationModel::setSourcePosition
void setSourcePosition(uint source_ID, const helios::vec3 &position)
Set the position/direction of radiation source based on a Cartesian vector.
Definition RadiationModel.cpp:1101
+
RadiationModel::writeCameraImage
void writeCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float flux_to_pixel_conversion=1.f)
Write camera data for one or more bands to a JPEG image.
Definition RadiationModel.cpp:1315
+
RadiationModel::setDiffuseRadiationFlux
void setDiffuseRadiationFlux(const std::string &label, float flux)
Diffuse (ambient) radiation flux.
Definition RadiationModel.cpp:97
+
RadiationModel::calibrateCamera
void calibrateCamera(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Calibrate camera.
Definition RadiationModel.cpp:5652
+
RadiationModel::setDiffuseRayCount
void setDiffuseRayCount(const std::string &label, size_t N)
Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
Definition RadiationModel.cpp:90
+
RadiationModel::getSourcePosition
helios::vec3 getSourcePosition(uint source_ID) const
Get the position/direction of radiation source.
Definition RadiationModel.cpp:1125
+
RadiationModel::addRectangleRadiationSource
uint addRectangleRadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
Add planar rectangular radiation source.
Definition RadiationModel.cpp:411
+
RadiationModel::enableMessages
void enableMessages()
Enable status messages.
Definition RadiationModel.cpp:69
+
RadiationModel::disableLightModelVisualization
void disableLightModelVisualization()
Remove the 3D model of the light source from the Context.
Definition RadiationModel.cpp:686
+
RadiationModel::scaleSpectrumRandomly
void scaleSpectrumRandomly(const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor) const
Scale an entire spectrum by a random factor following a uniform distribution.
Definition RadiationModel.cpp:999
+
RadiationModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition RadiationModel.cpp:73
+
RadiationModel::writeImageBoundingBoxes_ObjectData
void writeImageBoundingBoxes_ObjectData(const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on object data labels (Ultralytic's YOLO format). Object data must have ty...
Definition RadiationModel.cpp:5512
+
RadiationModel::setDiffuseRadiationExtinctionCoeff
void setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const helios::vec3 &peak_dir)
Extinction coefficient of diffuse ambient radiation.
Definition RadiationModel.cpp:108
+
RadiationModel::updateGeometry
void updateGeometry()
Adds all geometric primitives from the Context to OptiX.
Definition RadiationModel.cpp:1985
+
RadiationModel::RadiationModel
RadiationModel(helios::Context *context)
Default constructor.
Definition RadiationModel.cpp:20
+
RadiationModel::addRadiationBand
void addRadiationBand(const std::string &label)
Add a spectral radiation band to the model.
Definition RadiationModel.cpp:194
+
RadiationModel::enableCameraModelVisualization
void enableCameraModelVisualization()
Add a 3D model of the camera to the Context for visualization purposes.
Definition RadiationModel.cpp:693
+
RadiationModel::writeDepthImageData
void writeDepthImageData(const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write depth image data to text file.
Definition RadiationModel.cpp:5276
+
RadiationModel::getCameraResponseScale
float getCameraResponseScale(const std::string &orginalcameralabel, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &sourcelabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues)
Get the scale factor of the camera response for a given camera.
Definition RadiationModel.cpp:5070
+
RadiationModel::addCollimatedRadiationSource
uint addCollimatedRadiationSource()
Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)...
Definition RadiationModel.cpp:299
+
RadiationModel::~RadiationModel
~RadiationModel()
Destructor.
Definition RadiationModel.cpp:61
+
RadiationModel::addRadiationCamera
void addRadiationCamera(const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
Add a radiation camera sensor.
Definition RadiationModel.cpp:1173
+
RadiationModel::setDiffuseSpectrum
void setDiffuseSpectrum(const std::string &spectrum_label)
Set the spectral distribution of diffuse ambient radiation FOR ALL BANDS based on global data of wave...
Definition RadiationModel.cpp:618
+
RadiationModel::getDiffuseFlux
float getDiffuseFlux(const std::string &band_label) const
Get the diffuse flux for a given band.
Definition RadiationModel.cpp:654
+
RadiationModel::updateCameraResponse
void updateCameraResponse(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels_raw, const std::vector< std::string > &cameraresponselabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Update the camera response for a given camera based on color board.
Definition RadiationModel.cpp:4868
+
RadiationModel::integrateSourceSpectrum
float integrateSourceSpectrum(uint source_ID, float wavelength1, float wavelength2) const
Integrate a source spectral distribution between two wavelength bounds.
Definition RadiationModel.cpp:963
+
RadiationModel::writeObjectDataLabelMap
void writeObjectDataLabelMap(const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on object data. Object data must have type 'float',...
Definition RadiationModel.cpp:5184
+
helios::CompoundObject::getObjectType
helios::ObjectType getObjectType() const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2247
+
helios::CompoundObject::getTransformationMatrix
void getTransformationMatrix(float(&T)[16]) const
Method to return the Affine transformation matrix of a Compound Object.
Definition Context.cpp:2503
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveTransformationMatrix
void getPrimitiveTransformationMatrix(uint UUID, float(&T)[16]) const
Method to return the Affine transformation matrix of a Primitive.
Definition Context.cpp:7108
+
helios::Context::loadXML
std::vector< uint > loadXML(const char *filename, bool quiet=false)
Load inputs specified in an XML file.
Definition Context_fileIO.cpp:1217
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:2983
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition Context.cpp:2589
+
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition Context_data.cpp:2815
+
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition Context.cpp:2116
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::primitiveTextureHasTransparencyChannel
bool primitiveTextureHasTransparencyChannel(uint UUID) const
Check if primitive texture map has a transparency channel.
Definition Context.cpp:7179
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition Context_data.cpp:4533
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition Context.cpp:1741
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::loadOBJ
std::vector< uint > loadOBJ(const char *filename, bool silent=false)
Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
Definition Context_fileIO.cpp:3742
+
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Context.cpp:2046
+
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition Context_data.cpp:4502
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveTextureTransparencyData
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData(uint UUID) const
Get the transparency channel pixel data from primitive texture map. If transparency channel does not ...
Definition Context.cpp:7187
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::setGlobalData
void setGlobalData(const char *label, const int &data)
Add global data value (int)
Definition Context_data.cpp:3844
+
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition Context.cpp:1491
+
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition Context.cpp:7104
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition Context.cpp:1750
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition Context.cpp:3312
+
helios::Context::scanXMLForTag
static bool scanXMLForTag(const std::string &filename, const std::string &tag, const std::string &label="")
Scan a Helios XML file to check if a tag exists.
Definition Context_fileIO.cpp:2403
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:2969
+
helios::Tile::getSubdivisionCount
helios::int2 getSubdivisionCount() const
Get the number of sub-patch divisions of the tile.
Definition Context.cpp:3343
+
helios::Tile::getVertices
std::vector< helios::vec3 > getVertices() const
Get the Cartesian coordinates of each of the four corners of the tile object.
Definition Context.cpp:3352
+
helios::interp1
float interp1(const std::vector< helios::vec2 > &points, float x)
Function to perform linear interpolation based on a vector of discrete (x,y) values.
Definition global.cpp:3022
+
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition global.cpp:3102
+
helios::getFileName
std::string getFileName(const std::string &filepath)
Parse a file string to get the filename including extension.
Definition global.cpp:3085
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::writeJPEG
void writeJPEG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBcolor > &pixel_data)
Function to write a JPEG image based on pixel data.
Definition global.cpp:1868
+
helios::flatten
std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
Function to flatten a 2D int vector into a 1D vector.
Definition global.cpp:1943
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::sum
float sum(const std::vector< float > &vect)
Sum of a vector of floats.
Definition global.cpp:1069
+
helios::Context::getPrimitiveCount
uint getPrimitiveCount() const
Get the total number of Primitives in the Context.
Definition Context.cpp:1759
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_vec4
vec4 make_vec4(float x, float y, float z, float w)
Make a vec4 from three floats.
Definition helios_vector_types.h:763
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
CameraCalibration
Camera calibration structure used for camera calibration tasks.
Definition CameraCalibration.h:21
+
CameraCalibration::writeCalibratedCameraResponses
void writeCalibratedCameraResponses(const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
Write calibrated camera response spectra.
Definition CameraCalibration.cpp:366
+
CameraCalibration::getCameraResponseScale
float getCameraResponseScale(const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
Get camera spectral response scale.
Definition CameraCalibration.cpp:599
+
CameraCalibration::addDefaultColorboard
std::vector< uint > addDefaultColorboard(const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
Set reflectivity for a specific UUID.
Definition CameraCalibration.cpp:152
+
CameraCalibration::preprocessSpectra
void preprocessSpectra(const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
Preprocess all spectra for modelling.
Definition CameraCalibration.cpp:476
+
CameraCalibration::updateCameraResponseSpectra
std::vector< float > updateCameraResponseSpectra(const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
Update camera response spectra.
Definition CameraCalibration.cpp:294
+
CameraProperties
Properties defining a radiation camera.
Definition RadiationModel.h:31
+
CameraProperties::camera_resolution
helios::int2 camera_resolution
Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (....
Definition RadiationModel.h:38
+
CameraProperties::focal_plane_distance
float focal_plane_distance
Distance from the viewing plane to the focal plane.
Definition RadiationModel.h:41
+
CameraProperties::HFOV
float HFOV
Camera horizontal field of view in degrees.
Definition RadiationModel.h:47
+
CameraProperties::lens_diameter
float lens_diameter
Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
Definition RadiationModel.h:44
+
CameraProperties::FOV_aspect_ratio
float FOV_aspect_ratio
Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (....
Definition RadiationModel.h:50
+
RadiationBand
Properties defining a radiation band.
Definition RadiationModel.h:113
+
RadiationBand::wavebandBounds
helios::vec2 wavebandBounds
Waveband range of band.
Definition RadiationModel.h:164
+
RadiationBand::label
std::string label
Label for band.
Definition RadiationModel.h:131
+
RadiationCamera
Data object for a radiation camera.
Definition RadiationModel.h:70
+
RadiationSource
Radiation source data object.
Definition RadiationModel.h:184
+
RadiationSource::source_spectrum
std::vector< helios::vec2 > source_spectrum
Spectral distribution of radiation source. Each element of the vector is a wavelength band,...
Definition RadiationModel.h:241
+
RadiationSource::source_width
helios::vec2 source_width
Widths for each radiation source (N/A for collimated sources)
Definition RadiationModel.h:246
+
RadiationSource::source_position
helios::vec3 source_position
Positions of radiation source.
Definition RadiationModel.h:235
+
RadiationSource::source_flux_scaling_factor
float source_flux_scaling_factor
Source flux factors used to scale flux in case of a sun sphere source.
Definition RadiationModel.h:252
+
RadiationSource::source_rotation
helios::vec3 source_rotation
Rotation (rx,ry,rz) for radiation source (area sources only)
Definition RadiationModel.h:249
+
RadiationSource::source_type
RadiationSourceType source_type
Types of all radiation sources.
Definition RadiationModel.h:255
+
RadiationSource::source_fluxes
std::map< std::string, float > source_fluxes
Fluxes of radiation source for all bands.
Definition RadiationModel.h:258
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::scale
void scale(float scale_factor)
Scale RGBcolor by some factor.
Definition helios_vector_types.h:910
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
+
helios::vec4
Vector of four elements of type 'float'.
Definition helios_vector_types.h:673
+
helios::vec4::y
float y
Second element in vector.
Definition helios_vector_types.h:679
+
helios::vec4::w
float w
Fourth element in vector.
Definition helios_vector_types.h:683
+
helios::vec4::z
float z
Third element in vector.
Definition helios_vector_types.h:681
+
helios::vec4::x
float x
First element in vector.
Definition helios_vector_types.h:677
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_radiation_model_8h.html b/doc/html/_radiation_model_8h.html index 87d11754d..f2b38e873 100644 --- a/doc/html/_radiation_model_8h.html +++ b/doc/html/_radiation_model_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | @@ -127,12 +139,12 @@ - +

Macros

#define RT_CHECK_ERROR(func)
#define RT_CHECK_ERROR(func)
 
- - +

Enumerations

enum  RadiationSourceType {
+
enum  RadiationSourceType {
  RADIATION_SOURCE_TYPE_COLLIMATED = 0 , RADIATION_SOURCE_TYPE_SPHERE = 1 , RADIATION_SOURCE_TYPE_SUN_SPHERE = 2 @@ -141,14 +153,14 @@   RADIATION_SOURCE_TYPE_DISK = 4
}
 Possible types of radiation sources. More...
 Possible types of radiation sources. More...
 
- + - +

Functions

void sutilHandleError (RTcontext context, RTresult code, const char *file, int line)
void sutilHandleError (RTcontext context, RTresult code, const char *file, int line)
 
void sutilReportError (const char *message)
void sutilReportError (const char *message)
 

Detailed Description

@@ -168,8 +180,7 @@

#define RT_CHECK_ERROR ( -   - func) + func) @@ -192,7 +203,7 @@

- +
enum RadiationSourceTypeenum RadiationSourceType

@@ -213,31 +224,22 @@

void sutilHandleError ( - RTcontext  - context, + RTcontext context, - RTresult  - code, + RTresult code, - const char *  - file, + const char * file, - int  - line  - - - - ) - + int line )

@@ -255,8 +257,7 @@

void sutilReportError ( - const char *  - message) + const char * message) @@ -269,7 +270,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_radiation_model_8h_source.html b/doc/html/_radiation_model_8h_source.html index 640d51ab5..d62207581 100644 --- a/doc/html/_radiation_model_8h_source.html +++ b/doc/html/_radiation_model_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
RadiationModel.h
@@ -107,6 +119,7 @@
27
28#include <utility>
29
+
31struct CameraProperties{
32
33 bool operator!=(const CameraProperties &rhs) const {
@@ -139,7 +152,9 @@
65 }
66
67};
+
68
+
70struct RadiationCamera{
71
72 //Constructor
@@ -181,10 +196,13 @@
108 std::vector<float> pixel_depth;
109
110};
+
111
+
113struct RadiationBand{
114public:
115
+
117 explicit RadiationBand( std::string a_label, size_t directRayCount_default, size_t diffuseRayCount_default, float diffuseFlux_default, uint scatteringDepth_default, float minScatterEnergy_default ) : label(std::move(a_label)) {
118 directRayCount = directRayCount_default;
119 diffuseRayCount = diffuseRayCount_default;
@@ -197,6 +215,7 @@
126 wavebandBounds = helios::make_vec2(0,0);
127 radiativepropertiesinitialized = false;
128 }
+
129
131 std::string label;
132
@@ -228,7 +247,9 @@
170
171
172};
+
173
+
175enum RadiationSourceType{
176 RADIATION_SOURCE_TYPE_COLLIMATED = 0,
177 RADIATION_SOURCE_TYPE_SPHERE = 1,
@@ -236,10 +257,13 @@
179 RADIATION_SOURCE_TYPE_RECTANGLE = 3,
180 RADIATION_SOURCE_TYPE_DISK = 4
181};
+
182
+
184struct RadiationSource{
185public:
186
+
188 explicit RadiationSource( const helios::vec3 &position) : source_position(position){
189 source_type = RADIATION_SOURCE_TYPE_COLLIMATED;
190
@@ -247,7 +271,9 @@
192 source_position_scaling_factor = 1.f;
193 source_flux_scaling_factor = 1.f;
194 };
+
195
+
197 RadiationSource( const helios::vec3 &position, float width ) : source_position(position){
198 source_type = RADIATION_SOURCE_TYPE_SPHERE;
199
@@ -257,13 +283,17 @@
203 source_position_scaling_factor = 1.f;
204 source_flux_scaling_factor = 1.f;
205 };
+
206
+
208 RadiationSource( const helios::vec3 &position, float position_scaling_factor, float width, float flux_scaling_factor ) : source_position(position), source_position_scaling_factor(position_scaling_factor), source_flux_scaling_factor(flux_scaling_factor){
209 source_type = RADIATION_SOURCE_TYPE_SUN_SPHERE;
210 source_width = helios::make_vec2(width,width);
211 };
+
212
213
+
215 RadiationSource( const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation ) : source_position(position), source_width(size), source_rotation(rotation){
216 source_type = RADIATION_SOURCE_TYPE_RECTANGLE;
217
@@ -271,7 +301,9 @@
219 source_position_scaling_factor = 1.f;
220 source_flux_scaling_factor = 1.f;
221 };
+
222
+
224 RadiationSource( const helios::vec3 &position, float width, const helios::vec3 &rotation ) : source_position(position), source_rotation(rotation){
225 source_type = RADIATION_SOURCE_TYPE_DISK;
226
@@ -281,6 +313,7 @@
230 source_position_scaling_factor = 1.f;
231 source_flux_scaling_factor = 1.f;
232 };
+
233
235 helios::vec3 source_position;
236
@@ -301,11 +334,13 @@
258 std::map<std::string,float> source_fluxes;
259
260};
+
261
+
263class RadiationModel{
264public:
265
-
267 explicit RadiationModel( helios::Context* context );
+
267 explicit RadiationModel( helios::Context* context );
268
270 ~RadiationModel();
271
@@ -999,6 +1034,7 @@
1654 std::vector<std::string> spectral_library_files;
1655
1656};
+
1657
1658void sutilHandleError(RTcontext context, RTresult code, const char* file, int line);
1659
@@ -1015,126 +1051,128 @@
1670#endif
-
RadiationSourceType
RadiationSourceType
Possible types of radiation sources.
Definition: RadiationModel.h:175
-
RadiationModel
Radiation transport model plugin.
Definition: RadiationModel.h:263
-
RadiationModel::getCameraOrientation
helios::SphericalCoord getCameraOrientation(const std::string &camera_label) const
Get the orientation of the radiation camera based on a spherical coordinate.
Definition: RadiationModel.cpp:1282
-
RadiationModel::setSourceSpectrumIntegral
void setSourceSpectrumIntegral(uint source_ID, float source_integral)
Set the integral of the source spectral flux distribution across all possible wavelengths (=∫Sdλ)
Definition: RadiationModel.cpp:482
-
RadiationModel::deleteRadiationSource
void deleteRadiationSource(uint sourceID)
Delete an existing radiation source (any type)
Definition: RadiationModel.cpp:472
-
RadiationModel::calculateGtheta
float calculateGtheta(helios::Context *context, helios::vec3 view_direction)
Calculate G(theta) (i.e., projected area fraction) for a group of primitives given a certain viewing ...
Definition: RadiationModel.cpp:4839
-
RadiationModel::disableMessages
void disableMessages()
Disable/silence status messages.
Definition: RadiationModel.cpp:65
-
RadiationModel::setCameraSpectralResponse
void setCameraSpectralResponse(const std::string &camera_label, const std::string &band_label, const std::string &global_data)
Set the spectral response of a camera band based on reference to global data. This function version u...
Definition: RadiationModel.cpp:1210
-
RadiationModel::setSourceFlux
void setSourceFlux(uint source_ID, const std::string &band_label, float flux)
Set the flux of radiation source for this band.
Definition: RadiationModel.cpp:519
-
RadiationModel::setCameraOrientation
void setCameraOrientation(const std::string &camera_label, const helios::vec3 &direction)
Set the orientation of the radiation camera based on a Cartesian vector.
Definition: RadiationModel.cpp:1269
-
RadiationModel::scaleSpectrum
void scaleSpectrum(const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor) const
Scale an entire spectrum by a constant factor. Creates new global data for scaled spectrum.
Definition: RadiationModel.cpp:975
-
RadiationModel::blendSpectraRandomly
void blendSpectraRandomly(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels) const
Blend one or more spectra together into a new spectrum, with random weights assigned to each input sp...
Definition: RadiationModel.cpp:1085
-
RadiationModel::blendSpectra
void blendSpectra(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels, const std::vector< float > &weights) const
Blend one or more spectra together into a new spectrum.
Definition: RadiationModel.cpp:1006
-
RadiationModel::addSphereRadiationSource
uint addSphereRadiationSource(const helios::vec3 &position, float radius)
Add an external source of radiation that emits from the surface of a sphere.
Definition: RadiationModel.cpp:343
-
RadiationModel::enforcePeriodicBoundary
void enforcePeriodicBoundary(const std::string &boundary)
Use a periodic boundary condition in one or more lateral directions.
Definition: RadiationModel.cpp:1150
-
RadiationModel::getAllCameraLabels
std::vector< std::string > getAllCameraLabels()
Get the labels for all radiation cameras that have been added to the radiation model.
Definition: RadiationModel.cpp:1305
-
RadiationModel::integrateSpectrum
float integrateSpectrum(const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
Integrate a spectral distribution between two wavelength bounds.
Definition: RadiationModel.cpp:846
-
RadiationModel::setDirectRayCount
void setDirectRayCount(const std::string &label, size_t N)
Sets variable directRayCount, the number of rays to be used in direct radiation model.
Definition: RadiationModel.cpp:83
-
RadiationModel::selfTest
int selfTest()
Self-test.
Definition: selfTest.cpp:20
-
RadiationModel::copyRadiationBand
void copyRadiationBand(const std::string &old_label, const std::string &new_label)
Copy a spectral radiation band based on a previously created band.
Definition: RadiationModel.cpp:241
-
RadiationModel::writeCameraImageData
void writeCameraImageData(const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write camera data for one band to an ASCII text file.
Definition: RadiationModel.cpp:1435
-
RadiationModel::writeImageBoundingBoxes
void writeImageBoundingBoxes(const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on primitive data labels (Ultralytic's YOLO format). Primitive data must h...
Definition: RadiationModel.cpp:5403
-
RadiationModel::enableLightModelVisualization
void enableLightModelVisualization()
Add a 3D model of the light source (rectangular, disk, and sphere) to the Context for visualization p...
Definition: RadiationModel.cpp:676
-
RadiationModel::getTotalAbsorbedFlux
std::vector< float > getTotalAbsorbedFlux()
Get the total absorbed radiation flux summed over all bands for each primitive.
Definition: RadiationModel.cpp:3740
-
RadiationModel::writeNormCameraImage
void writeNormCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write normalized camera data (maximum value is 1) for one or more bands to a JPEG image.
Definition: RadiationModel.cpp:1401
-
RadiationModel::writeNormDepthImage
void writeNormDepthImage(const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path="./", int frame=-1)
Write depth image file, with grayscale normalized to the minimum and maximum depth values.
Definition: RadiationModel.cpp:5332
-
RadiationModel::getCameraPosition
helios::vec3 getCameraPosition(const std::string &camera_label) const
Get the position of the radiation camera.
Definition: RadiationModel.cpp:1236
-
RadiationModel::setMinScatterEnergy
void setMinScatterEnergy(const std::string &label, uint energy)
Set the energy threshold used to terminate scattering iterations. Scattering iterations are terminate...
Definition: RadiationModel.cpp:1141
-
RadiationModel::getCameraLookat
helios::vec3 getCameraLookat(const std::string &camera_label) const
Get the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition: RadiationModel.cpp:1259
-
RadiationModel::disableCameraModelVisualization
void disableCameraModelVisualization()
Remove the 3D model of the camera from the Context.
Definition: RadiationModel.cpp:703
-
RadiationModel::setDiffuseSpectrumIntegral
void setDiffuseSpectrumIntegral(float spectrum_integral)
Set the integral of the diffuse spectral flux distribution across all possible wavelengths FOR ALL EX...
Definition: RadiationModel.cpp:143
-
RadiationModel::setScatteringDepth
void setScatteringDepth(const std::string &label, uint depth)
Set the number of scattering iterations for a certain band.
Definition: RadiationModel.cpp:1132
-
RadiationModel::runRadiationImaging
void runRadiationImaging(const std::string &cameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
Run radiation imaging simulation.
Definition: RadiationModel.cpp:4985
-
RadiationModel::setPadValue
void setPadValue(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const std::vector< float > &padvalues)
Set padding value for pixels do not have valid values.
Definition: RadiationModel.cpp:5630
-
RadiationModel::disableEmission
void disableEmission(const std::string &label)
Disable emission calculations for all primitives in this band.
Definition: RadiationModel.cpp:279
-
RadiationModel::writePrimitiveDataLabelMap
void writePrimitiveDataLabelMap(const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on primitive data. Primitive data must have type 'float',...
Definition: RadiationModel.cpp:5093
-
RadiationModel::setSourceSpectrum
void setSourceSpectrum(uint source_ID, const std::vector< helios::vec2 > &spectrum)
Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pai...
Definition: RadiationModel.cpp:567
-
RadiationModel::enableEmission
void enableEmission(const std::string &label)
Enable emission calculations for all primitives in this band.
Definition: RadiationModel.cpp:289
-
RadiationModel::runBand
void runBand(const std::string &label)
Run the simulation for a single radiative band.
Definition: RadiationModel.cpp:3117
-
RadiationModel::setCameraLookat
void setCameraLookat(const std::string &camera_label, const helios::vec3 &lookat)
Set the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition: RadiationModel.cpp:1246
-
RadiationModel::addSunSphereRadiationSource
uint addSunSphereRadiationSource()
Add a sphere radiation source that models the sun assuming the default direction of (0,...
Definition: RadiationModel.cpp:373
-
RadiationModel::addDiskRadiationSource
uint addDiskRadiationSource(const helios::vec3 &position, float radius, const helios::vec3 &rotation)
Add planar circular radiation source.
Definition: RadiationModel.cpp:441
-
RadiationModel::doesBandExist
bool doesBandExist(const std::string &label) const
Check if a radiation band exists based on its label.
Definition: RadiationModel.cpp:271
-
RadiationModel::getSkyEnergy
float getSkyEnergy()
Get the radiative energy lost to the sky (surroundings)
Definition: RadiationModel.cpp:3728
-
RadiationModel::getSourceFlux
float getSourceFlux(uint source_ID, const std::string &band_label) const
Get the flux of radiation source for this band.
Definition: RadiationModel.cpp:541
-
RadiationModel::setCameraPosition
void setCameraPosition(const std::string &camera_label, const helios::vec3 &position)
Set the position of the radiation camera.
Definition: RadiationModel.cpp:1221
-
RadiationModel::setSourcePosition
void setSourcePosition(uint source_ID, const helios::vec3 &position)
Set the position/direction of radiation source based on a Cartesian vector.
Definition: RadiationModel.cpp:1101
-
RadiationModel::writeCameraImage
void writeCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float flux_to_pixel_conversion=1.f)
Write camera data for one or more bands to a JPEG image.
Definition: RadiationModel.cpp:1315
-
RadiationModel::setDiffuseRadiationFlux
void setDiffuseRadiationFlux(const std::string &label, float flux)
Diffuse (ambient) radiation flux.
Definition: RadiationModel.cpp:97
-
RadiationModel::calibrateCamera
void calibrateCamera(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Calibrate camera.
Definition: RadiationModel.cpp:5652
-
RadiationModel::setDiffuseRayCount
void setDiffuseRayCount(const std::string &label, size_t N)
Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
Definition: RadiationModel.cpp:90
-
RadiationModel::getSourcePosition
helios::vec3 getSourcePosition(uint source_ID) const
Get the position/direction of radiation source.
Definition: RadiationModel.cpp:1125
-
RadiationModel::addRectangleRadiationSource
uint addRectangleRadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
Add planar rectangular radiation source.
Definition: RadiationModel.cpp:411
-
RadiationModel::enableMessages
void enableMessages()
Enable status messages.
Definition: RadiationModel.cpp:69
-
RadiationModel::disableLightModelVisualization
void disableLightModelVisualization()
Remove the 3D model of the light source from the Context.
Definition: RadiationModel.cpp:686
-
RadiationModel::scaleSpectrumRandomly
void scaleSpectrumRandomly(const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor) const
Scale an entire spectrum by a random factor following a uniform distribution.
Definition: RadiationModel.cpp:999
-
RadiationModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: RadiationModel.cpp:73
-
RadiationModel::writeImageBoundingBoxes_ObjectData
void writeImageBoundingBoxes_ObjectData(const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on object data labels (Ultralytic's YOLO format). Object data must have ty...
Definition: RadiationModel.cpp:5512
-
RadiationModel::setDiffuseRadiationExtinctionCoeff
void setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const helios::vec3 &peak_dir)
Extinction coefficient of diffuse ambient radiation.
Definition: RadiationModel.cpp:108
-
RadiationModel::updateGeometry
void updateGeometry()
Adds all geometric primitives from the Context to OptiX.
Definition: RadiationModel.cpp:1985
-
RadiationModel::addRadiationBand
void addRadiationBand(const std::string &label)
Add a spectral radiation band to the model.
Definition: RadiationModel.cpp:194
-
RadiationModel::enableCameraModelVisualization
void enableCameraModelVisualization()
Add a 3D model of the camera to the Context for visualization purposes.
Definition: RadiationModel.cpp:693
-
RadiationModel::writeDepthImageData
void writeDepthImageData(const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write depth image data to text file.
Definition: RadiationModel.cpp:5276
-
RadiationModel::getCameraResponseScale
float getCameraResponseScale(const std::string &orginalcameralabel, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &sourcelabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues)
Get the scale factor of the camera response for a given camera.
Definition: RadiationModel.cpp:5070
-
RadiationModel::addCollimatedRadiationSource
uint addCollimatedRadiationSource()
Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)...
Definition: RadiationModel.cpp:299
-
RadiationModel::~RadiationModel
~RadiationModel()
Destructor.
Definition: RadiationModel.cpp:61
-
RadiationModel::addRadiationCamera
void addRadiationCamera(const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
Add a radiation camera sensor.
Definition: RadiationModel.cpp:1173
-
RadiationModel::setDiffuseSpectrum
void setDiffuseSpectrum(const std::string &spectrum_label)
Set the spectral distribution of diffuse ambient radiation FOR ALL BANDS based on global data of wave...
Definition: RadiationModel.cpp:618
-
RadiationModel::getDiffuseFlux
float getDiffuseFlux(const std::string &band_label) const
Get the diffuse flux for a given band.
Definition: RadiationModel.cpp:654
-
RadiationModel::updateCameraResponse
void updateCameraResponse(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels_raw, const std::vector< std::string > &cameraresponselabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Update the camera response for a given camera based on color board.
Definition: RadiationModel.cpp:4868
-
RadiationModel::integrateSourceSpectrum
float integrateSourceSpectrum(uint source_ID, float wavelength1, float wavelength2) const
Integrate a source spectral distribution between two wavelength bounds.
Definition: RadiationModel.cpp:963
-
RadiationModel::writeObjectDataLabelMap
void writeObjectDataLabelMap(const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on object data. Object data must have type 'float',...
Definition: RadiationModel.cpp:5184
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
CameraCalibration
Camera calibration structure used for camera calibration tasks.
Definition: CameraCalibration.h:21
-
CameraProperties
Properties defining a radiation camera.
Definition: RadiationModel.h:31
-
CameraProperties::camera_resolution
helios::int2 camera_resolution
Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (....
Definition: RadiationModel.h:38
-
CameraProperties::focal_plane_distance
float focal_plane_distance
Distance from the viewing plane to the focal plane.
Definition: RadiationModel.h:41
-
CameraProperties::HFOV
float HFOV
Camera horizontal field of view in degrees.
Definition: RadiationModel.h:47
-
CameraProperties::lens_diameter
float lens_diameter
Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
Definition: RadiationModel.h:44
-
CameraProperties::FOV_aspect_ratio
float FOV_aspect_ratio
Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (....
Definition: RadiationModel.h:50
-
RadiationBand
Properties defining a radiation band.
Definition: RadiationModel.h:113
-
RadiationBand::wavebandBounds
helios::vec2 wavebandBounds
Waveband range of band.
Definition: RadiationModel.h:164
-
RadiationBand::scatteringDepth
uint scatteringDepth
Scattering depth for wave band.
Definition: RadiationModel.h:155
-
RadiationBand::diffuse_spectrum
std::vector< helios::vec2 > diffuse_spectrum
Spectral distribution of diffuse radiation flux for wave band.
Definition: RadiationModel.h:152
-
RadiationBand::RadiationBand
RadiationBand(std::string a_label, size_t directRayCount_default, size_t diffuseRayCount_default, float diffuseFlux_default, uint scatteringDepth_default, float minScatterEnergy_default)
Constructor.
Definition: RadiationModel.h:117
-
RadiationBand::label
std::string label
Label for band.
Definition: RadiationModel.h:131
-
RadiationBand::minScatterEnergy
float minScatterEnergy
Minimum energy for scattering for wave band.
Definition: RadiationModel.h:158
-
RadiationBand::diffusePeakDir
helios::vec3 diffusePeakDir
Direction of peak in ambient diffuse radiation.
Definition: RadiationModel.h:146
-
RadiationBand::diffuseDistNorm
float diffuseDistNorm
Diffuse distribution normalization factor.
Definition: RadiationModel.h:149
-
RadiationBand::diffuseExtinction
float diffuseExtinction
Distribution coefficient of ambient diffuse radiation for wave band.
Definition: RadiationModel.h:143
-
RadiationBand::diffuseFlux
float diffuseFlux
Diffuse component of radiation flux integrated over wave band.
Definition: RadiationModel.h:140
-
RadiationBand::radiativepropertiesinitialized
bool radiativepropertiesinitialized
Flag to indicate whether radiative bands have been initialized for this band.
Definition: RadiationModel.h:167
-
RadiationBand::emissionFlag
bool emissionFlag
Flag that determines if emission calculations are performed for wave band.
Definition: RadiationModel.h:161
-
RadiationBand::diffuseRayCount
size_t diffuseRayCount
Number of diffuse rays launched per element.
Definition: RadiationModel.h:137
-
RadiationBand::directRayCount
size_t directRayCount
Number of direct rays launched per element.
Definition: RadiationModel.h:134
-
RadiationCamera
Data object for a radiation camera.
Definition: RadiationModel.h:70
-
RadiationSource
Radiation source data object.
Definition: RadiationModel.h:184
-
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, float position_scaling_factor, float width, float flux_scaling_factor)
Constructor for sun sphere radiation source.
Definition: RadiationModel.h:208
-
RadiationSource::source_position_scaling_factor
float source_position_scaling_factor
Source position factors used to scale position in case of a sun sphere source.
Definition: RadiationModel.h:238
-
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position)
Constructor for collimated radiation source.
Definition: RadiationModel.h:188
-
RadiationSource::source_spectrum
std::vector< helios::vec2 > source_spectrum
Spectral distribution of radiation source. Each element of the vector is a wavelength band,...
Definition: RadiationModel.h:241
-
RadiationSource::source_width
helios::vec2 source_width
Widths for each radiation source (N/A for collimated sources)
Definition: RadiationModel.h:246
-
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, float width)
Constructor for spherical radiation source.
Definition: RadiationModel.h:197
-
RadiationSource::source_position
helios::vec3 source_position
Positions of radiation source.
Definition: RadiationModel.h:235
-
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
Constructor for rectangular radiation source.
Definition: RadiationModel.h:215
-
RadiationSource::source_flux_scaling_factor
float source_flux_scaling_factor
Source flux factors used to scale flux in case of a sun sphere source.
Definition: RadiationModel.h:252
-
RadiationSource::source_rotation
helios::vec3 source_rotation
Rotation (rx,ry,rz) for radiation source (area sources only)
Definition: RadiationModel.h:249
-
RadiationSource::source_type
RadiationSourceType source_type
Types of all radiation sources.
Definition: RadiationModel.h:255
-
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, float width, const helios::vec3 &rotation)
Constructor for disk radiation source.
Definition: RadiationModel.h:224
-
RadiationSource::source_fluxes
std::map< std::string, float > source_fluxes
Fluxes of radiation source for all bands.
Definition: RadiationModel.h:258
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
RadiationSourceType
RadiationSourceType
Possible types of radiation sources.
Definition RadiationModel.h:175
+
RadiationModel
Radiation transport model plugin.
Definition RadiationModel.h:263
+
RadiationModel::getCameraOrientation
helios::SphericalCoord getCameraOrientation(const std::string &camera_label) const
Get the orientation of the radiation camera based on a spherical coordinate.
Definition RadiationModel.cpp:1282
+
RadiationModel::setSourceSpectrumIntegral
void setSourceSpectrumIntegral(uint source_ID, float source_integral)
Set the integral of the source spectral flux distribution across all possible wavelengths (=∫Sdλ)
Definition RadiationModel.cpp:482
+
RadiationModel::deleteRadiationSource
void deleteRadiationSource(uint sourceID)
Delete an existing radiation source (any type)
Definition RadiationModel.cpp:472
+
RadiationModel::calculateGtheta
float calculateGtheta(helios::Context *context, helios::vec3 view_direction)
Calculate G(theta) (i.e., projected area fraction) for a group of primitives given a certain viewing ...
Definition RadiationModel.cpp:4839
+
RadiationModel::disableMessages
void disableMessages()
Disable/silence status messages.
Definition RadiationModel.cpp:65
+
RadiationModel::setCameraSpectralResponse
void setCameraSpectralResponse(const std::string &camera_label, const std::string &band_label, const std::string &global_data)
Set the spectral response of a camera band based on reference to global data. This function version u...
Definition RadiationModel.cpp:1210
+
RadiationModel::setSourceFlux
void setSourceFlux(uint source_ID, const std::string &band_label, float flux)
Set the flux of radiation source for this band.
Definition RadiationModel.cpp:519
+
RadiationModel::setCameraOrientation
void setCameraOrientation(const std::string &camera_label, const helios::vec3 &direction)
Set the orientation of the radiation camera based on a Cartesian vector.
Definition RadiationModel.cpp:1269
+
RadiationModel::scaleSpectrum
void scaleSpectrum(const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor) const
Scale an entire spectrum by a constant factor. Creates new global data for scaled spectrum.
Definition RadiationModel.cpp:975
+
RadiationModel::blendSpectraRandomly
void blendSpectraRandomly(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels) const
Blend one or more spectra together into a new spectrum, with random weights assigned to each input sp...
Definition RadiationModel.cpp:1085
+
RadiationModel::blendSpectra
void blendSpectra(const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels, const std::vector< float > &weights) const
Blend one or more spectra together into a new spectrum.
Definition RadiationModel.cpp:1006
+
RadiationModel::addSphereRadiationSource
uint addSphereRadiationSource(const helios::vec3 &position, float radius)
Add an external source of radiation that emits from the surface of a sphere.
Definition RadiationModel.cpp:343
+
RadiationModel::enforcePeriodicBoundary
void enforcePeriodicBoundary(const std::string &boundary)
Use a periodic boundary condition in one or more lateral directions.
Definition RadiationModel.cpp:1150
+
RadiationModel::getAllCameraLabels
std::vector< std::string > getAllCameraLabels()
Get the labels for all radiation cameras that have been added to the radiation model.
Definition RadiationModel.cpp:1305
+
RadiationModel::integrateSpectrum
float integrateSpectrum(const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
Integrate a spectral distribution between two wavelength bounds.
Definition RadiationModel.cpp:846
+
RadiationModel::setDirectRayCount
void setDirectRayCount(const std::string &label, size_t N)
Sets variable directRayCount, the number of rays to be used in direct radiation model.
Definition RadiationModel.cpp:83
+
RadiationModel::selfTest
int selfTest()
Self-test.
Definition selfTest.cpp:20
+
RadiationModel::copyRadiationBand
void copyRadiationBand(const std::string &old_label, const std::string &new_label)
Copy a spectral radiation band based on a previously created band.
Definition RadiationModel.cpp:241
+
RadiationModel::writeCameraImageData
void writeCameraImageData(const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write camera data for one band to an ASCII text file.
Definition RadiationModel.cpp:1435
+
RadiationModel::writeImageBoundingBoxes
void writeImageBoundingBoxes(const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on primitive data labels (Ultralytic's YOLO format). Primitive data must h...
Definition RadiationModel.cpp:5403
+
RadiationModel::enableLightModelVisualization
void enableLightModelVisualization()
Add a 3D model of the light source (rectangular, disk, and sphere) to the Context for visualization p...
Definition RadiationModel.cpp:676
+
RadiationModel::getTotalAbsorbedFlux
std::vector< float > getTotalAbsorbedFlux()
Get the total absorbed radiation flux summed over all bands for each primitive.
Definition RadiationModel.cpp:3740
+
RadiationModel::writeNormCameraImage
void writeNormCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write normalized camera data (maximum value is 1) for one or more bands to a JPEG image.
Definition RadiationModel.cpp:1401
+
RadiationModel::writeNormDepthImage
void writeNormDepthImage(const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path="./", int frame=-1)
Write depth image file, with grayscale normalized to the minimum and maximum depth values.
Definition RadiationModel.cpp:5332
+
RadiationModel::getCameraPosition
helios::vec3 getCameraPosition(const std::string &camera_label) const
Get the position of the radiation camera.
Definition RadiationModel.cpp:1236
+
RadiationModel::setMinScatterEnergy
void setMinScatterEnergy(const std::string &label, uint energy)
Set the energy threshold used to terminate scattering iterations. Scattering iterations are terminate...
Definition RadiationModel.cpp:1141
+
RadiationModel::getCameraLookat
helios::vec3 getCameraLookat(const std::string &camera_label) const
Get the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition RadiationModel.cpp:1259
+
RadiationModel::disableCameraModelVisualization
void disableCameraModelVisualization()
Remove the 3D model of the camera from the Context.
Definition RadiationModel.cpp:703
+
RadiationModel::setDiffuseSpectrumIntegral
void setDiffuseSpectrumIntegral(float spectrum_integral)
Set the integral of the diffuse spectral flux distribution across all possible wavelengths FOR ALL EX...
Definition RadiationModel.cpp:143
+
RadiationModel::setScatteringDepth
void setScatteringDepth(const std::string &label, uint depth)
Set the number of scattering iterations for a certain band.
Definition RadiationModel.cpp:1132
+
RadiationModel::runRadiationImaging
void runRadiationImaging(const std::string &cameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
Run radiation imaging simulation.
Definition RadiationModel.cpp:4985
+
RadiationModel::setPadValue
void setPadValue(const std::string &cameralabel, const std::vector< std::string > &bandlabels, const std::vector< float > &padvalues)
Set padding value for pixels do not have valid values.
Definition RadiationModel.cpp:5630
+
RadiationModel::disableEmission
void disableEmission(const std::string &label)
Disable emission calculations for all primitives in this band.
Definition RadiationModel.cpp:279
+
RadiationModel::writePrimitiveDataLabelMap
void writePrimitiveDataLabelMap(const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on primitive data. Primitive data must have type 'float',...
Definition RadiationModel.cpp:5093
+
RadiationModel::setSourceSpectrum
void setSourceSpectrum(uint source_ID, const std::vector< helios::vec2 > &spectrum)
Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pai...
Definition RadiationModel.cpp:567
+
RadiationModel::enableEmission
void enableEmission(const std::string &label)
Enable emission calculations for all primitives in this band.
Definition RadiationModel.cpp:289
+
RadiationModel::runBand
void runBand(const std::string &label)
Run the simulation for a single radiative band.
Definition RadiationModel.cpp:3117
+
RadiationModel::setCameraLookat
void setCameraLookat(const std::string &camera_label, const helios::vec3 &lookat)
Set the position the radiation camera is pointed toward (used to calculate camera orientation)
Definition RadiationModel.cpp:1246
+
RadiationModel::addSunSphereRadiationSource
uint addSunSphereRadiationSource()
Add a sphere radiation source that models the sun assuming the default direction of (0,...
Definition RadiationModel.cpp:373
+
RadiationModel::addDiskRadiationSource
uint addDiskRadiationSource(const helios::vec3 &position, float radius, const helios::vec3 &rotation)
Add planar circular radiation source.
Definition RadiationModel.cpp:441
+
RadiationModel::doesBandExist
bool doesBandExist(const std::string &label) const
Check if a radiation band exists based on its label.
Definition RadiationModel.cpp:271
+
RadiationModel::getSkyEnergy
float getSkyEnergy()
Get the radiative energy lost to the sky (surroundings)
Definition RadiationModel.cpp:3728
+
RadiationModel::getSourceFlux
float getSourceFlux(uint source_ID, const std::string &band_label) const
Get the flux of radiation source for this band.
Definition RadiationModel.cpp:541
+
RadiationModel::setCameraPosition
void setCameraPosition(const std::string &camera_label, const helios::vec3 &position)
Set the position of the radiation camera.
Definition RadiationModel.cpp:1221
+
RadiationModel::setSourcePosition
void setSourcePosition(uint source_ID, const helios::vec3 &position)
Set the position/direction of radiation source based on a Cartesian vector.
Definition RadiationModel.cpp:1101
+
RadiationModel::writeCameraImage
void writeCameraImage(const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float flux_to_pixel_conversion=1.f)
Write camera data for one or more bands to a JPEG image.
Definition RadiationModel.cpp:1315
+
RadiationModel::setDiffuseRadiationFlux
void setDiffuseRadiationFlux(const std::string &label, float flux)
Diffuse (ambient) radiation flux.
Definition RadiationModel.cpp:97
+
RadiationModel::calibrateCamera
void calibrateCamera(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Calibrate camera.
Definition RadiationModel.cpp:5652
+
RadiationModel::setDiffuseRayCount
void setDiffuseRayCount(const std::string &label, size_t N)
Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
Definition RadiationModel.cpp:90
+
RadiationModel::getSourcePosition
helios::vec3 getSourcePosition(uint source_ID) const
Get the position/direction of radiation source.
Definition RadiationModel.cpp:1125
+
RadiationModel::addRectangleRadiationSource
uint addRectangleRadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
Add planar rectangular radiation source.
Definition RadiationModel.cpp:411
+
RadiationModel::enableMessages
void enableMessages()
Enable status messages.
Definition RadiationModel.cpp:69
+
RadiationModel::disableLightModelVisualization
void disableLightModelVisualization()
Remove the 3D model of the light source from the Context.
Definition RadiationModel.cpp:686
+
RadiationModel::scaleSpectrumRandomly
void scaleSpectrumRandomly(const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor) const
Scale an entire spectrum by a random factor following a uniform distribution.
Definition RadiationModel.cpp:999
+
RadiationModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition RadiationModel.cpp:73
+
RadiationModel::writeImageBoundingBoxes_ObjectData
void writeImageBoundingBoxes_ObjectData(const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
Write bounding boxes based on object data labels (Ultralytic's YOLO format). Object data must have ty...
Definition RadiationModel.cpp:5512
+
RadiationModel::setDiffuseRadiationExtinctionCoeff
void setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const helios::vec3 &peak_dir)
Extinction coefficient of diffuse ambient radiation.
Definition RadiationModel.cpp:108
+
RadiationModel::updateGeometry
void updateGeometry()
Adds all geometric primitives from the Context to OptiX.
Definition RadiationModel.cpp:1985
+
RadiationModel::RadiationModel
RadiationModel(helios::Context *context)
Default constructor.
Definition RadiationModel.cpp:20
+
RadiationModel::addRadiationBand
void addRadiationBand(const std::string &label)
Add a spectral radiation band to the model.
Definition RadiationModel.cpp:194
+
RadiationModel::enableCameraModelVisualization
void enableCameraModelVisualization()
Add a 3D model of the camera to the Context for visualization purposes.
Definition RadiationModel.cpp:693
+
RadiationModel::writeDepthImageData
void writeDepthImageData(const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
Write depth image data to text file.
Definition RadiationModel.cpp:5276
+
RadiationModel::getCameraResponseScale
float getCameraResponseScale(const std::string &orginalcameralabel, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &sourcelabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues)
Get the scale factor of the camera response for a given camera.
Definition RadiationModel.cpp:5070
+
RadiationModel::addCollimatedRadiationSource
uint addCollimatedRadiationSource()
Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)...
Definition RadiationModel.cpp:299
+
RadiationModel::~RadiationModel
~RadiationModel()
Destructor.
Definition RadiationModel.cpp:61
+
RadiationModel::addRadiationCamera
void addRadiationCamera(const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
Add a radiation camera sensor.
Definition RadiationModel.cpp:1173
+
RadiationModel::setDiffuseSpectrum
void setDiffuseSpectrum(const std::string &spectrum_label)
Set the spectral distribution of diffuse ambient radiation FOR ALL BANDS based on global data of wave...
Definition RadiationModel.cpp:618
+
RadiationModel::getDiffuseFlux
float getDiffuseFlux(const std::string &band_label) const
Get the diffuse flux for a given band.
Definition RadiationModel.cpp:654
+
RadiationModel::updateCameraResponse
void updateCameraResponse(const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels_raw, const std::vector< std::string > &cameraresponselabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
Update the camera response for a given camera based on color board.
Definition RadiationModel.cpp:4868
+
RadiationModel::integrateSourceSpectrum
float integrateSourceSpectrum(uint source_ID, float wavelength1, float wavelength2) const
Integrate a source spectral distribution between two wavelength bounds.
Definition RadiationModel.cpp:963
+
RadiationModel::writeObjectDataLabelMap
void writeObjectDataLabelMap(const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
Write image pixel labels to text file based on object data. Object data must have type 'float',...
Definition RadiationModel.cpp:5184
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
CameraCalibration
Camera calibration structure used for camera calibration tasks.
Definition CameraCalibration.h:21
+
CameraProperties
Properties defining a radiation camera.
Definition RadiationModel.h:31
+
CameraProperties::camera_resolution
helios::int2 camera_resolution
Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (....
Definition RadiationModel.h:38
+
CameraProperties::focal_plane_distance
float focal_plane_distance
Distance from the viewing plane to the focal plane.
Definition RadiationModel.h:41
+
CameraProperties::HFOV
float HFOV
Camera horizontal field of view in degrees.
Definition RadiationModel.h:47
+
CameraProperties::lens_diameter
float lens_diameter
Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
Definition RadiationModel.h:44
+
CameraProperties::FOV_aspect_ratio
float FOV_aspect_ratio
Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (....
Definition RadiationModel.h:50
+
RadiationBand
Properties defining a radiation band.
Definition RadiationModel.h:113
+
RadiationBand::wavebandBounds
helios::vec2 wavebandBounds
Waveband range of band.
Definition RadiationModel.h:164
+
RadiationBand::scatteringDepth
uint scatteringDepth
Scattering depth for wave band.
Definition RadiationModel.h:155
+
RadiationBand::diffuse_spectrum
std::vector< helios::vec2 > diffuse_spectrum
Spectral distribution of diffuse radiation flux for wave band.
Definition RadiationModel.h:152
+
RadiationBand::RadiationBand
RadiationBand(std::string a_label, size_t directRayCount_default, size_t diffuseRayCount_default, float diffuseFlux_default, uint scatteringDepth_default, float minScatterEnergy_default)
Constructor.
Definition RadiationModel.h:117
+
RadiationBand::label
std::string label
Label for band.
Definition RadiationModel.h:131
+
RadiationBand::minScatterEnergy
float minScatterEnergy
Minimum energy for scattering for wave band.
Definition RadiationModel.h:158
+
RadiationBand::diffusePeakDir
helios::vec3 diffusePeakDir
Direction of peak in ambient diffuse radiation.
Definition RadiationModel.h:146
+
RadiationBand::diffuseDistNorm
float diffuseDistNorm
Diffuse distribution normalization factor.
Definition RadiationModel.h:149
+
RadiationBand::diffuseExtinction
float diffuseExtinction
Distribution coefficient of ambient diffuse radiation for wave band.
Definition RadiationModel.h:143
+
RadiationBand::diffuseFlux
float diffuseFlux
Diffuse component of radiation flux integrated over wave band.
Definition RadiationModel.h:140
+
RadiationBand::radiativepropertiesinitialized
bool radiativepropertiesinitialized
Flag to indicate whether radiative bands have been initialized for this band.
Definition RadiationModel.h:167
+
RadiationBand::emissionFlag
bool emissionFlag
Flag that determines if emission calculations are performed for wave band.
Definition RadiationModel.h:161
+
RadiationBand::diffuseRayCount
size_t diffuseRayCount
Number of diffuse rays launched per element.
Definition RadiationModel.h:137
+
RadiationBand::directRayCount
size_t directRayCount
Number of direct rays launched per element.
Definition RadiationModel.h:134
+
RadiationCamera
Data object for a radiation camera.
Definition RadiationModel.h:70
+
RadiationSource
Radiation source data object.
Definition RadiationModel.h:184
+
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, float position_scaling_factor, float width, float flux_scaling_factor)
Constructor for sun sphere radiation source.
Definition RadiationModel.h:208
+
RadiationSource::source_position_scaling_factor
float source_position_scaling_factor
Source position factors used to scale position in case of a sun sphere source.
Definition RadiationModel.h:238
+
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position)
Constructor for collimated radiation source.
Definition RadiationModel.h:188
+
RadiationSource::source_spectrum
std::vector< helios::vec2 > source_spectrum
Spectral distribution of radiation source. Each element of the vector is a wavelength band,...
Definition RadiationModel.h:241
+
RadiationSource::source_width
helios::vec2 source_width
Widths for each radiation source (N/A for collimated sources)
Definition RadiationModel.h:246
+
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, float width)
Constructor for spherical radiation source.
Definition RadiationModel.h:197
+
RadiationSource::source_position
helios::vec3 source_position
Positions of radiation source.
Definition RadiationModel.h:235
+
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
Constructor for rectangular radiation source.
Definition RadiationModel.h:215
+
RadiationSource::source_flux_scaling_factor
float source_flux_scaling_factor
Source flux factors used to scale flux in case of a sun sphere source.
Definition RadiationModel.h:252
+
RadiationSource::source_rotation
helios::vec3 source_rotation
Rotation (rx,ry,rz) for radiation source (area sources only)
Definition RadiationModel.h:249
+
RadiationSource::source_type
RadiationSourceType source_type
Types of all radiation sources.
Definition RadiationModel.h:255
+
RadiationSource::RadiationSource
RadiationSource(const helios::vec3 &position, float width, const helios::vec3 &rotation)
Constructor for disk radiation source.
Definition RadiationModel.h:224
+
RadiationSource::source_fluxes
std::map< std::string, float > source_fluxes
Fluxes of radiation source for all bands.
Definition RadiationModel.h:258
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_ray_tracing_8cu_8h.html b/doc/html/_ray_tracing_8cu_8h.html index 77239ba10..ef4346373 100644 --- a/doc/html/_ray_tracing_8cu_8h.html +++ b/doc/html/_ray_tracing_8cu_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | Macros | -Typedefs | Functions
RayTracing.cu.h File Reference
@@ -107,45 +118,40 @@ - +

Macros

#define M_PI   3.14159265358979323846
#define M_PI   3.14159265358979323846
 
- - - -

-Typedefs

typedef unsigned int uint
 
- - + - + - + - + - + - + - + - + - + - + - + - +

Functions

+
void queryGPUMemory (void)
 
__device__ __inline__ void atomicFloatAdd (float *address, float val)
__device__ __inline__ void atomicFloatAdd (float *address, float val)
 
__device__ __inline__ double atomicAdd (double *address, double val)
__device__ __inline__ double atomicAdd (double *address, double val)
 
__device__ float3 d_rotatePoint (const float3 &position, const float &theta, const float &phi)
__device__ float3 d_rotatePoint (const float3 &position, const float &theta, const float &phi)
 
__device__ void d_makeTransformMatrix (optix::float3 rotation, float(&T)[16])
__device__ void d_makeTransformMatrix (optix::float3 rotation, float(&T)[16])
 
__device__ void d_invertMatrix (const float *m, float *minv)
__device__ void d_invertMatrix (const float *m, float *minv)
 
__device__ void d_transformPoint (const float(&transform_matrix)[16], float3 &v)
__device__ void d_transformPoint (const float(&transform_matrix)[16], float3 &v)
 Function to transform a 3D point based on current affine transformation matrix on the GPU.
 
__device__ float d_magnitude (const float3 v)
__device__ float d_magnitude (const float3 v)
 Function to calculate the magnitude of float3 vector on the GPU.
 
__device__ float d_calculatePrimitiveArea (const uint primitive_type, const float(&transform_matrix)[16])
__device__ float d_calculatePrimitiveArea (const uint primitive_type, const float(&transform_matrix)[16])
 Function to calculate the surface area of a primitive.
 
__device__ void d_matMult33 (float *ml, float *mr, float *m)
__device__ void d_matMult33 (float *ml, float *mr, float *m)
 
__device__ void d_matMult44 (float *ml, float *mr, float *m)
__device__ void d_matMult44 (float *ml, float *mr, float *m)
 
__device__ void d_sampleDisk (uint &seed, optix::float3 &sample)
__device__ void d_sampleDisk (uint &seed, optix::float3 &sample)
 
__device__ void d_sampleSquare (uint &seed, optix::float3 &sample)
__device__ void d_sampleSquare (uint &seed, optix::float3 &sample)
 

Detailed Description

@@ -170,23 +176,6 @@

Definition at line 17 of file RayTracing.cu.h.

-

- -

Typedef Documentation

- -

◆ uint

- -
-
- - - - -
typedef unsigned int uint
-
- -

Definition at line 20 of file RayTracing.cu.h.

-

Function Documentation

@@ -199,19 +188,12 @@

__device__ __inline__ double atomicAdd ( - double *  - address, + double * address, - double  - val  - - - - ) - + double val )
@@ -229,19 +211,12 @@

__device__ __inline__ void atomicFloatAdd ( - float *  - address, + float * address, - float  - val  - - - - ) - + float val )

@@ -259,19 +234,12 @@

__device__ float d_calculatePrimitiveArea ( - const uint  - primitive_type, + const uint primitive_type, - const float(&)  - transform_matrix[16]  - - - - ) - + const float(&) transform_matrix[16] )

@@ -291,19 +259,12 @@

__device__ void d_invertMatrix ( - const float *  - m, + const float * m, - float *  - minv  - - - - ) - + float * minv )

@@ -321,8 +282,7 @@

__device__ float d_magnitude ( - const float3  - v) + const float3 v) @@ -343,19 +303,12 @@

__device__ void d_makeTransformMatrix ( - optix::float3  - rotation, + optix::float3 rotation, - float(&)  - T[16]  - - - - ) - + float(&) T[16] )

@@ -373,25 +326,17 @@

__device__ void d_matMult33 ( - float *  - ml, + float * ml, - float *  - mr, + float * mr, - float *  - m  - - - - ) - + float * m )

@@ -409,25 +354,17 @@

__device__ void d_matMult44 ( - float *  - ml, + float * ml, - float *  - mr, + float * mr, - float *  - m  - - - - ) - + float * m )

@@ -445,25 +382,17 @@

__device__ float3 d_rotatePoint ( - const float3 &  - position, + const float3 & position, - const float &  - theta, + const float & theta, - const float &  - phi  - - - - ) - + const float & phi )

@@ -490,19 +419,12 @@

__device__ void d_sampleDisk ( - uint &  - seed, + uint & seed, - optix::float3 &  - sample  - - - - ) - + optix::float3 & sample )

@@ -520,19 +442,12 @@

__device__ void d_sampleSquare ( - uint &  - seed, + uint & seed, - optix::float3 &  - sample  - - - - ) - + optix::float3 & sample )

@@ -550,19 +465,12 @@

__device__ void d_transformPoint ( - const float(&)  - transform_matrix[16], + const float(&) transform_matrix[16], - float3 &  - v  - - - - ) - + float3 & v )

@@ -576,7 +484,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_ray_tracing_8cu_8h_source.html b/doc/html/_ray_tracing_8cu_8h_source.html index 0bfb02170..c15727dbe 100644 --- a/doc/html/_ray_tracing_8cu_8h_source.html +++ b/doc/html/_ray_tracing_8cu_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
RayTracing.cu.h
@@ -101,6 +113,7 @@
21
22void queryGPUMemory( void );
23
+
25struct PerRayData
26{
27
@@ -114,6 +127,7 @@
44 unsigned char source_ID;
45
46};
+
47
48static __device__ void init_state( PerRayData* prd );
49
@@ -172,6 +186,7 @@
102 return ((float) lcg(prev) / (float) 0x01000000);
103}
104
+
106__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi) {
107
112 float Ry[3][3], Rz[3][3];
@@ -224,6 +239,7 @@
159 return tmp;
160
161}
+
162
163__device__ void d_makeTransformMatrix( optix::float3 rotation, float (&T)[16] ){
164
@@ -377,6 +393,7 @@
312}
313
314
+
316__device__ void d_transformPoint( const float (&transform_matrix)[16], float3 &v ){
317
318 float3 V;
@@ -388,11 +405,15 @@
324 v=V;
325
326}
+
327
+
329__device__ float d_magnitude( const float3 v ){
330 return sqrtf( v.x*v.x+v.y*v.y+v.z*v.z );
331}
+
332
+
334__device__ float d_calculatePrimitiveArea( const uint primitive_type, const float (&transform_matrix)[16] ){
335
336 if( primitive_type == 0 || primitive_type == 3 ){ //Patch or AlphaMask
@@ -433,6 +454,7 @@
371 return 0;
372
373}
+
374
375__device__ void d_matMult33( float* ml, float* mr, float* m ){
376
@@ -541,24 +563,25 @@
479 else if (x > 1.0) x = 1.0 ;
480 return asin(x) ;
481}
-
d_calculatePrimitiveArea
__device__ float d_calculatePrimitiveArea(const uint primitive_type, const float(&transform_matrix)[16])
Function to calculate the surface area of a primitive.
Definition: RayTracing.cu.h:334
-
d_transformPoint
__device__ void d_transformPoint(const float(&transform_matrix)[16], float3 &v)
Function to transform a 3D point based on current affine transformation matrix on the GPU.
Definition: RayTracing.cu.h:316
-
d_magnitude
__device__ float d_magnitude(const float3 v)
Function to calculate the magnitude of float3 vector on the GPU.
Definition: RayTracing.cu.h:329
-
d_rotatePoint
__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
Definition: RayTracing.cu.h:106
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::asin_safe
float asin_safe(float x)
arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:247
- -
PerRayData::source_ID
unsigned char source_ID
Numerical identifier for radiation source corresponding to each ray.
Definition: RayTracing.cu.h:44
-
PerRayData::strength
double strength
"strength" or amount of energy associated with the ray.
Definition: RayTracing.cu.h:29
-
PerRayData::area
float area
Area of primitive (note for voxels, this is area density)
Definition: RayTracing.cu.h:35
-
PerRayData::origin_UUID
uint origin_UUID
UUID of primitive from which ray originated.
Definition: RayTracing.cu.h:31
-
PerRayData::seed
uint seed
Seed for curand random number generator.
Definition: RayTracing.cu.h:37
-
PerRayData::periodic_depth
unsigned char periodic_depth
Number of periodic boundary intersections for ray.
Definition: RayTracing.cu.h:39
-
PerRayData::face
bool face
Face of primitive from which ray was launched (true=top, false=bottom)
Definition: RayTracing.cu.h:33
+
d_calculatePrimitiveArea
__device__ float d_calculatePrimitiveArea(const uint primitive_type, const float(&transform_matrix)[16])
Function to calculate the surface area of a primitive.
Definition RayTracing.cu.h:334
+
d_transformPoint
__device__ void d_transformPoint(const float(&transform_matrix)[16], float3 &v)
Function to transform a 3D point based on current affine transformation matrix on the GPU.
Definition RayTracing.cu.h:316
+
d_magnitude
__device__ float d_magnitude(const float3 v)
Function to calculate the magnitude of float3 vector on the GPU.
Definition RayTracing.cu.h:329
+
d_rotatePoint
__device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
Definition RayTracing.cu.h:106
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::asin_safe
float asin_safe(float x)
arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:247
+ +
PerRayData::source_ID
unsigned char source_ID
Numerical identifier for radiation source corresponding to each ray.
Definition RayTracing.cu.h:44
+
PerRayData::strength
double strength
"strength" or amount of energy associated with the ray.
Definition RayTracing.cu.h:29
+
PerRayData::area
float area
Area of primitive (note for voxels, this is area density)
Definition RayTracing.cu.h:35
+
PerRayData::origin_UUID
uint origin_UUID
UUID of primitive from which ray originated.
Definition RayTracing.cu.h:31
+
PerRayData::seed
uint seed
Seed for curand random number generator.
Definition RayTracing.cu.h:37
+
PerRayData::periodic_depth
unsigned char periodic_depth
Number of periodic boundary intersections for ray.
Definition RayTracing.cu.h:39
+
PerRayData::face
bool face
Face of primitive from which ray was launched (true=top, false=bottom)
Definition RayTracing.cu.h:33
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_solar_position_8cpp.html b/doc/html/_solar_position_8cpp.html index ed2789688..89586830c 100644 --- a/doc/html/_solar_position_8cpp.html +++ b/doc/html/_solar_position_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
SolarPosition.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_solar_position_8cpp_source.html b/doc/html/_solar_position_8cpp_source.html index b5f805b1d..342580aee 100644 --- a/doc/html/_solar_position_8cpp_source.html +++ b/doc/html/_solar_position_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
SolarPosition.cpp
@@ -98,14 +110,17 @@
18using namespace std;
19using namespace helios;
20
+
21SolarPosition::SolarPosition( helios::Context* context_ptr ){
22 context = context_ptr;
23 UTC = context->getLocation().UTC_offset;
24 latitude = context->getLocation().latitude_deg;
25 longitude = context->getLocation().longitude_deg;
26}
+
27
28
+
29SolarPosition::SolarPosition( float UTC_hrs, float latitude_deg, float longitude_deg, helios::Context* context_ptr ){
30 context = context_ptr;
31 UTC = UTC_hrs;
@@ -127,6 +142,7 @@
47 }
48
49}
+
50
51SphericalCoord SolarPosition::calculateSunDirection( const helios::Time &time, const helios::Date &date ) const{
52
@@ -176,6 +192,7 @@
96
97}
98
+
99Time SolarPosition::getSunriseTime() const{
100
101 //This is a lazy way to find the sunrise/sunset time. If anyone wants to do the math and solve for it algebraically, go for it.
@@ -192,7 +209,9 @@
112 return make_Time(0,0); //should never get here
113
114}
+
115
+
116Time SolarPosition::getSunsetTime() const{
117
118 // SphericalCoord sun_dir;
@@ -208,7 +227,9 @@
128 return make_Time(0,0); //should never get here
129
130}
+
131
+
132float SolarPosition::getSunElevation() const{
133 float elevation;
134 if( issolarpositionoverridden ){
@@ -218,7 +239,9 @@
138 }
139 return elevation;
140}
+
141
+
142float SolarPosition::getSunZenith() const{
143 float zenith;
144 if( issolarpositionoverridden ){
@@ -228,7 +251,9 @@
148 }
149 return zenith;
150}
+
151
+
152float SolarPosition::getSunAzimuth() const{
153 float azimuth;
154 if( issolarpositionoverridden ){
@@ -238,7 +263,9 @@
158 }
159 return azimuth;
160}
+
161
+
162vec3 SolarPosition::getSunDirectionVector() const{
163 SphericalCoord sundirection;
164 if( issolarpositionoverridden ) {
@@ -248,7 +275,9 @@
168 }
169 return sphere2cart(sundirection);
170}
+
171
+
172SphericalCoord SolarPosition::getSunDirectionSpherical() const{
173 SphericalCoord sundirection;
174 if( issolarpositionoverridden ) {
@@ -258,12 +287,16 @@
178 }
179 return sundirection;
180}
+
181
+
182void SolarPosition::setSunDirection( const helios::SphericalCoord &sundirection ){
183 issolarpositionoverridden = true;
184 sun_direction = sundirection;
185}
+
186
+
187float SolarPosition::getSolarFlux(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity ) const{
188 float Eb_PAR, Eb_NIR, fdiff;
189 GueymardSolarModel(pressure_Pa, temperature_K, humidity_rel, turbidity, Eb_PAR, Eb_NIR, fdiff);
@@ -273,7 +306,9 @@
193 }
194 return Eb;
195}
+
196
+
197float SolarPosition::getSolarFluxPAR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity ) const{
198 float Eb_PAR, Eb_NIR, fdiff;
199 GueymardSolarModel(pressure_Pa, temperature_K, humidity_rel, turbidity, Eb_PAR, Eb_NIR, fdiff);
@@ -282,7 +317,9 @@
202 }
203 return Eb_PAR;
204}
+
205
+
206float SolarPosition::getSolarFluxNIR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity ) const{
207 float Eb_PAR, Eb_NIR, fdiff;
208 GueymardSolarModel(pressure_Pa, temperature_K, humidity_rel, turbidity, Eb_PAR, Eb_NIR, fdiff);
@@ -291,7 +328,9 @@
211 }
212 return Eb_NIR;
213}
+
214
+
215float SolarPosition::getDiffuseFraction(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity ) const{
216 float Eb_PAR, Eb_NIR, fdiff;
217 GueymardSolarModel(pressure_Pa, temperature_K, humidity_rel, turbidity, Eb_PAR, Eb_NIR, fdiff);
@@ -300,6 +339,7 @@
220 }
221 return fdiff;
222}
+
223
224void SolarPosition::GueymardSolarModel( float pressure, float temperature, float humidity, float turbidity, float& Eb_PAR, float& Eb_NIR, float &fdiff ) const{
225
@@ -443,6 +483,7 @@
363
364}
365
+
366float SolarPosition::getAmbientLongwaveFlux(float temperature_K, float humidity_rel ) const{
367
368 //Model from Prata (1996) Q. J. R. Meteorol. Soc.
@@ -457,6 +498,7 @@
377 return eps*5.67e-8*pow(temperature_K, 4);
378
379}
+
380
381float SolarPosition::turbidityResidualFunction(float turbidity, std::vector<float> &parameters, const void * a_solarpositionmodel) {
382
@@ -471,6 +513,7 @@
391 return flux_model-flux_target;
392}
393
+
394float SolarPosition::calibrateTurbidityFromTimeseries( const std::string &timeseries_shortwave_flux_label_Wm2 ) const{
395
396 if( !context->doesTimeseriesVariableExist(timeseries_shortwave_flux_label_Wm2.c_str()) ){
@@ -512,7 +555,9 @@
432 return turbidity;
433
434}
+
435
+
436void SolarPosition::enableCloudCalibration( const std::string &timeseries_shortwave_flux_label_Wm2 ){
437
438 if( !context->doesTimeseriesVariableExist( timeseries_shortwave_flux_label_Wm2.c_str()) ){
@@ -522,10 +567,13 @@
442 cloudcalibrationlabel = timeseries_shortwave_flux_label_Wm2;
443
444}
+
445
+
446void SolarPosition::disableCloudCalibration(){
447 cloudcalibrationlabel = "";
448}
+
449
450void SolarPosition::applyCloudCalibration(float &R_calc_Wm2, float &fdiff_calc) const{
451
@@ -545,59 +593,60 @@
465}
466
- -
SolarPosition::SolarPosition
SolarPosition(helios::Context *context_ptr)
Solar position model default constructor. Initializes location based on the location set in the Conte...
Definition: SolarPosition.cpp:21
-
SolarPosition::disableCloudCalibration
void disableCloudCalibration()
Disable calibration of solar flux and diffuse fraction for clouds.
Definition: SolarPosition.cpp:446
-
SolarPosition::getSunAzimuth
float getSunAzimuth() const
Get the current sun azimuthal angle in radians for the current location. The sun angle is computed ba...
Definition: SolarPosition.cpp:152
-
SolarPosition::getSunriseTime
helios::Time getSunriseTime() const
Get the approximate time of sunrise at the current location.
Definition: SolarPosition.cpp:99
-
SolarPosition::getSunElevation
float getSunElevation() const
Get the current sun elevation angle in radians for the current location. The sun angle is computed ba...
Definition: SolarPosition.cpp:132
-
SolarPosition::getAmbientLongwaveFlux
float getAmbientLongwaveFlux(float temperature_K, float humidity_rel) const
Calculate the ambient (sky) longwave radiation flux.
Definition: SolarPosition.cpp:366
-
SolarPosition::getSunZenith
float getSunZenith() const
Get the current sun zenithal angle in radians for the current location. The sun angle is computed bas...
Definition: SolarPosition.cpp:142
-
SolarPosition::getSunsetTime
helios::Time getSunsetTime() const
Get the approximate time of sunset at the current location.
Definition: SolarPosition.cpp:116
-
SolarPosition::getSolarFluxPAR
float getSolarFluxPAR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the photosynthetically active (PAR) component of solar radiation flux perpendicular to the sun di...
Definition: SolarPosition.cpp:197
-
SolarPosition::getSolarFluxNIR
float getSolarFluxNIR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the near-infrared (NIR) component of solar radiation flux perpendicular to the sun direction.
Definition: SolarPosition.cpp:206
-
SolarPosition::getSolarFlux
float getSolarFlux(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the solar radiation flux perpendicular to the sun direction.
Definition: SolarPosition.cpp:187
-
SolarPosition::enableCloudCalibration
void enableCloudCalibration(const std::string &timeseries_shortwave_flux_label_Wm2)
Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against ...
Definition: SolarPosition.cpp:436
-
SolarPosition::getSunDirectionSpherical
helios::SphericalCoord getSunDirectionSpherical() const
Get a spherical coordinate vector pointing toward the sun for the current location....
Definition: SolarPosition.cpp:172
-
SolarPosition::calibrateTurbidityFromTimeseries
float calibrateTurbidityFromTimeseries(const std::string &timeseries_shortwave_flux_label_Wm2) const
Calculate the turbidity value based on a timeseries of net radiation measurements.
Definition: SolarPosition.cpp:394
-
SolarPosition::setSunDirection
void setSunDirection(const helios::SphericalCoord &sundirection)
Override solar position calculation based on time in the Context by using a prescribed solar position...
Definition: SolarPosition.cpp:182
-
SolarPosition::getSunDirectionVector
helios::vec3 getSunDirectionVector() const
Get a unit vector pointing toward the sun for the current location. The sun angle is computed based o...
Definition: SolarPosition.cpp:162
-
SolarPosition::getDiffuseFraction
float getDiffuseFraction(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the fraction of solar radiation flux that is diffuse.
Definition: SolarPosition.cpp:215
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getJulianDate
int getJulianDate() const
Get simulation date by Julian day.
Definition: Context.cpp:1132
-
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition: Context.cpp:1166
-
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition: Context.cpp:1099
-
helios::Context::getLocation
helios::Location getLocation() const
Get the location of the simulation (latitude, longitude, and UTC offset)
Definition: Context.cpp:1174
-
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition: global.cpp:2977
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:241
-
helios::asin_safe
float asin_safe(float x)
arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition: global.cpp:247
-
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition: Context.cpp:1958
-
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition: Context.cpp:2014
-
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition: Context.cpp:1894
-
helios::Context::doesTimeseriesVariableExist
bool doesTimeseriesVariableExist(const char *label) const
Query whether a timeseries variable exists.
Definition: Context.cpp:2026
-
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition: Context.cpp:1994
-
helios::make_Time
Time make_Time(int hour, int minute)
Make a Time vector.
Definition: helios_vector_types.h:1427
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
- -
helios::Date::JulianDay
int JulianDay() const
Convert to Julian day.
Definition: global.cpp:186
-
helios::Location::longitude_deg
float longitude_deg
Longitude in degrees (+western hemisphere, -eastern hemisphere)
Definition: helios_vector_types.h:1475
-
helios::Location::latitude_deg
float latitude_deg
Latitude in degrees (+northern hemisphere, -southern hemisphere)
Definition: helios_vector_types.h:1473
-
helios::Location::UTC_offset
float UTC_offset
Offset from UTC in hours (+moving West)
Definition: helios_vector_types.h:1477
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
- -
helios::Time::hour
int hour
Hour of day.
Definition: helios_vector_types.h:1359
-
helios::Time::minute
int minute
Minute of hour.
Definition: helios_vector_types.h:1357
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
SolarPosition::SolarPosition
SolarPosition(helios::Context *context_ptr)
Solar position model default constructor. Initializes location based on the location set in the Conte...
Definition SolarPosition.cpp:21
+
SolarPosition::disableCloudCalibration
void disableCloudCalibration()
Disable calibration of solar flux and diffuse fraction for clouds.
Definition SolarPosition.cpp:446
+
SolarPosition::getSunAzimuth
float getSunAzimuth() const
Get the current sun azimuthal angle in radians for the current location. The sun angle is computed ba...
Definition SolarPosition.cpp:152
+
SolarPosition::getSunriseTime
helios::Time getSunriseTime() const
Get the approximate time of sunrise at the current location.
Definition SolarPosition.cpp:99
+
SolarPosition::getSunElevation
float getSunElevation() const
Get the current sun elevation angle in radians for the current location. The sun angle is computed ba...
Definition SolarPosition.cpp:132
+
SolarPosition::getAmbientLongwaveFlux
float getAmbientLongwaveFlux(float temperature_K, float humidity_rel) const
Calculate the ambient (sky) longwave radiation flux.
Definition SolarPosition.cpp:366
+
SolarPosition::getSunZenith
float getSunZenith() const
Get the current sun zenithal angle in radians for the current location. The sun angle is computed bas...
Definition SolarPosition.cpp:142
+
SolarPosition::getSunsetTime
helios::Time getSunsetTime() const
Get the approximate time of sunset at the current location.
Definition SolarPosition.cpp:116
+
SolarPosition::getSolarFluxPAR
float getSolarFluxPAR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the photosynthetically active (PAR) component of solar radiation flux perpendicular to the sun di...
Definition SolarPosition.cpp:197
+
SolarPosition::getSolarFluxNIR
float getSolarFluxNIR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the near-infrared (NIR) component of solar radiation flux perpendicular to the sun direction.
Definition SolarPosition.cpp:206
+
SolarPosition::getSolarFlux
float getSolarFlux(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the solar radiation flux perpendicular to the sun direction.
Definition SolarPosition.cpp:187
+
SolarPosition::enableCloudCalibration
void enableCloudCalibration(const std::string &timeseries_shortwave_flux_label_Wm2)
Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against ...
Definition SolarPosition.cpp:436
+
SolarPosition::getSunDirectionSpherical
helios::SphericalCoord getSunDirectionSpherical() const
Get a spherical coordinate vector pointing toward the sun for the current location....
Definition SolarPosition.cpp:172
+
SolarPosition::calibrateTurbidityFromTimeseries
float calibrateTurbidityFromTimeseries(const std::string &timeseries_shortwave_flux_label_Wm2) const
Calculate the turbidity value based on a timeseries of net radiation measurements.
Definition SolarPosition.cpp:394
+
SolarPosition::setSunDirection
void setSunDirection(const helios::SphericalCoord &sundirection)
Override solar position calculation based on time in the Context by using a prescribed solar position...
Definition SolarPosition.cpp:182
+
SolarPosition::getSunDirectionVector
helios::vec3 getSunDirectionVector() const
Get a unit vector pointing toward the sun for the current location. The sun angle is computed based o...
Definition SolarPosition.cpp:162
+
SolarPosition::getDiffuseFraction
float getDiffuseFraction(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the fraction of solar radiation flux that is diffuse.
Definition SolarPosition.cpp:215
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getJulianDate
int getJulianDate() const
Get simulation date by Julian day.
Definition Context.cpp:1132
+
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition Context.cpp:1166
+
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition Context.cpp:1099
+
helios::Context::getLocation
helios::Location getLocation() const
Get the location of the simulation (latitude, longitude, and UTC offset)
Definition Context.cpp:1174
+
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition global.cpp:2977
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::acos_safe
float acos_safe(float x)
arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:241
+
helios::asin_safe
float asin_safe(float x)
arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
Definition global.cpp:247
+
helios::Context::queryTimeseriesTime
Time queryTimeseriesTime(const char *label, uint index) const
Get the time associated with a timeseries data point.
Definition Context.cpp:1958
+
helios::Context::getTimeseriesLength
uint getTimeseriesLength(const char *label) const
Get the length of timeseries data.
Definition Context.cpp:2014
+
helios::Context::queryTimeseriesData
float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
Get a timeseries data point by specifying a date and time vector.
Definition Context.cpp:1894
+
helios::Context::doesTimeseriesVariableExist
bool doesTimeseriesVariableExist(const char *label) const
Query whether a timeseries variable exists.
Definition Context.cpp:2026
+
helios::Context::queryTimeseriesDate
Date queryTimeseriesDate(const char *label, uint index) const
Get the date associated with a timeseries data point.
Definition Context.cpp:1994
+
helios::make_Time
Time make_Time(int hour, int minute)
Make a Time vector.
Definition helios_vector_types.h:1427
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+ +
helios::Date::JulianDay
int JulianDay() const
Convert to Julian day.
Definition global.cpp:186
+
helios::Location::longitude_deg
float longitude_deg
Longitude in degrees (+western hemisphere, -eastern hemisphere)
Definition helios_vector_types.h:1475
+
helios::Location::latitude_deg
float latitude_deg
Latitude in degrees (+northern hemisphere, -southern hemisphere)
Definition helios_vector_types.h:1473
+
helios::Location::UTC_offset
float UTC_offset
Offset from UTC in hours (+moving West)
Definition helios_vector_types.h:1477
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+ +
helios::Time::hour
int hour
Hour of day.
Definition helios_vector_types.h:1359
+
helios::Time::minute
int minute
Minute of hour.
Definition helios_vector_types.h:1357
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_solar_position_8h.html b/doc/html/_solar_position_8h.html index f4bfa70a1..60ce265b9 100644 --- a/doc/html/_solar_position_8h.html +++ b/doc/html/_solar_position_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -113,7 +125,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_solar_position_8h_source.html b/doc/html/_solar_position_8h_source.html index 5596b4d4c..d2c136d8b 100644 --- a/doc/html/_solar_position_8h_source.html +++ b/doc/html/_solar_position_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
SolarPosition.h
@@ -98,14 +110,15 @@
18
19#include "Context.h"
20
+
21class SolarPosition{
22 public:
23
25
-
28 explicit SolarPosition( helios::Context* context_ptr );
+
28 explicit SolarPosition( helios::Context* context_ptr );
29
31
-
37 SolarPosition(float UTC_hrs, float latitude_deg, float longitude_deg, helios::Context* context_ptr );
+
37 SolarPosition(float UTC_hrs, float latitude_deg, float longitude_deg, helios::Context* context_ptr );
38
40 int selfTest() const;
41
@@ -172,36 +185,39 @@
161
162
163};
+
164
165#endif
- -
SolarPosition::disableCloudCalibration
void disableCloudCalibration()
Disable calibration of solar flux and diffuse fraction for clouds.
Definition: SolarPosition.cpp:446
-
SolarPosition::getSunAzimuth
float getSunAzimuth() const
Get the current sun azimuthal angle in radians for the current location. The sun angle is computed ba...
Definition: SolarPosition.cpp:152
-
SolarPosition::getSunriseTime
helios::Time getSunriseTime() const
Get the approximate time of sunrise at the current location.
Definition: SolarPosition.cpp:99
-
SolarPosition::getSunElevation
float getSunElevation() const
Get the current sun elevation angle in radians for the current location. The sun angle is computed ba...
Definition: SolarPosition.cpp:132
-
SolarPosition::getAmbientLongwaveFlux
float getAmbientLongwaveFlux(float temperature_K, float humidity_rel) const
Calculate the ambient (sky) longwave radiation flux.
Definition: SolarPosition.cpp:366
-
SolarPosition::getSunZenith
float getSunZenith() const
Get the current sun zenithal angle in radians for the current location. The sun angle is computed bas...
Definition: SolarPosition.cpp:142
-
SolarPosition::getSunsetTime
helios::Time getSunsetTime() const
Get the approximate time of sunset at the current location.
Definition: SolarPosition.cpp:116
-
SolarPosition::getSolarFluxPAR
float getSolarFluxPAR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the photosynthetically active (PAR) component of solar radiation flux perpendicular to the sun di...
Definition: SolarPosition.cpp:197
-
SolarPosition::getSolarFluxNIR
float getSolarFluxNIR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the near-infrared (NIR) component of solar radiation flux perpendicular to the sun direction.
Definition: SolarPosition.cpp:206
-
SolarPosition::getSolarFlux
float getSolarFlux(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the solar radiation flux perpendicular to the sun direction.
Definition: SolarPosition.cpp:187
-
SolarPosition::enableCloudCalibration
void enableCloudCalibration(const std::string &timeseries_shortwave_flux_label_Wm2)
Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against ...
Definition: SolarPosition.cpp:436
-
SolarPosition::selfTest
int selfTest() const
Function to perform a self-test of model functions.
Definition: selfTest.cpp:5
-
SolarPosition::getSunDirectionSpherical
helios::SphericalCoord getSunDirectionSpherical() const
Get a spherical coordinate vector pointing toward the sun for the current location....
Definition: SolarPosition.cpp:172
-
SolarPosition::calibrateTurbidityFromTimeseries
float calibrateTurbidityFromTimeseries(const std::string &timeseries_shortwave_flux_label_Wm2) const
Calculate the turbidity value based on a timeseries of net radiation measurements.
Definition: SolarPosition.cpp:394
-
SolarPosition::setSunDirection
void setSunDirection(const helios::SphericalCoord &sundirection)
Override solar position calculation based on time in the Context by using a prescribed solar position...
Definition: SolarPosition.cpp:182
-
SolarPosition::getSunDirectionVector
helios::vec3 getSunDirectionVector() const
Get a unit vector pointing toward the sun for the current location. The sun angle is computed based o...
Definition: SolarPosition.cpp:162
-
SolarPosition::getDiffuseFraction
float getDiffuseFraction(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the fraction of solar radiation flux that is diffuse.
Definition: SolarPosition.cpp:215
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
- -
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
- -
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
SolarPosition::SolarPosition
SolarPosition(helios::Context *context_ptr)
Solar position model default constructor. Initializes location based on the location set in the Conte...
Definition SolarPosition.cpp:21
+
SolarPosition::disableCloudCalibration
void disableCloudCalibration()
Disable calibration of solar flux and diffuse fraction for clouds.
Definition SolarPosition.cpp:446
+
SolarPosition::getSunAzimuth
float getSunAzimuth() const
Get the current sun azimuthal angle in radians for the current location. The sun angle is computed ba...
Definition SolarPosition.cpp:152
+
SolarPosition::getSunriseTime
helios::Time getSunriseTime() const
Get the approximate time of sunrise at the current location.
Definition SolarPosition.cpp:99
+
SolarPosition::getSunElevation
float getSunElevation() const
Get the current sun elevation angle in radians for the current location. The sun angle is computed ba...
Definition SolarPosition.cpp:132
+
SolarPosition::getAmbientLongwaveFlux
float getAmbientLongwaveFlux(float temperature_K, float humidity_rel) const
Calculate the ambient (sky) longwave radiation flux.
Definition SolarPosition.cpp:366
+
SolarPosition::getSunZenith
float getSunZenith() const
Get the current sun zenithal angle in radians for the current location. The sun angle is computed bas...
Definition SolarPosition.cpp:142
+
SolarPosition::getSunsetTime
helios::Time getSunsetTime() const
Get the approximate time of sunset at the current location.
Definition SolarPosition.cpp:116
+
SolarPosition::getSolarFluxPAR
float getSolarFluxPAR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the photosynthetically active (PAR) component of solar radiation flux perpendicular to the sun di...
Definition SolarPosition.cpp:197
+
SolarPosition::getSolarFluxNIR
float getSolarFluxNIR(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the near-infrared (NIR) component of solar radiation flux perpendicular to the sun direction.
Definition SolarPosition.cpp:206
+
SolarPosition::getSolarFlux
float getSolarFlux(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the solar radiation flux perpendicular to the sun direction.
Definition SolarPosition.cpp:187
+
SolarPosition::enableCloudCalibration
void enableCloudCalibration(const std::string &timeseries_shortwave_flux_label_Wm2)
Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against ...
Definition SolarPosition.cpp:436
+
SolarPosition::selfTest
int selfTest() const
Function to perform a self-test of model functions.
Definition selfTest.cpp:5
+
SolarPosition::getSunDirectionSpherical
helios::SphericalCoord getSunDirectionSpherical() const
Get a spherical coordinate vector pointing toward the sun for the current location....
Definition SolarPosition.cpp:172
+
SolarPosition::calibrateTurbidityFromTimeseries
float calibrateTurbidityFromTimeseries(const std::string &timeseries_shortwave_flux_label_Wm2) const
Calculate the turbidity value based on a timeseries of net radiation measurements.
Definition SolarPosition.cpp:394
+
SolarPosition::setSunDirection
void setSunDirection(const helios::SphericalCoord &sundirection)
Override solar position calculation based on time in the Context by using a prescribed solar position...
Definition SolarPosition.cpp:182
+
SolarPosition::getSunDirectionVector
helios::vec3 getSunDirectionVector() const
Get a unit vector pointing toward the sun for the current location. The sun angle is computed based o...
Definition SolarPosition.cpp:162
+
SolarPosition::getDiffuseFraction
float getDiffuseFraction(float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
Get the fraction of solar radiation flux that is diffuse.
Definition SolarPosition.cpp:215
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+ +
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+ +
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_solar_position_doc.html b/doc/html/_solar_position_doc.html index a09ab5a12..c17380a39 100644 --- a/doc/html/_solar_position_doc.html +++ b/doc/html/_solar_position_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Solar Position Plugin Documentation
+
Solar Position Plugin Documentation

Table of Contents

-


@@ -215,7 +255,7 @@

float azimuth = sun.getSunAzimuth(); //azimuthal angle (radians)
}
- +

Getting the Solar Flux

The solar flux can be calculated using the REST-2 model of Gueymard (2008) using the SolarPosition::getSolarFlux() function. IT IS CRITICAL TO NOTE THAT THE CALCULATED FLUX IS FOR A SURFACE PERPENDICULAR TO THE SUN DIRECTION. To get the flux on a horizontal surface, multiply by the cosine of the solar zenith angle.

@@ -269,20 +309,20 @@

Consider $R_{meas,h}$ to be the measured all-wave incoming solar radiation flux on a horizontal plane (clear or cloudy conditions), and $R_{clear}$ to be the predicted all-wave incoming solar radiation flux predicted by the REST2 model for clear-sky conditions perpendicular to the direction of the sun. This flux can be projected onto the horizontal plane according to

\[ - R_{clear,h} = R_{clear}\mathrm{cos}\,\theta_s. -\] + R_{clear,h} = R_{clear}\mathrm{cos}\,\theta_s. + \]" src="form_209.png" width="149" height="17"/>

The diffuse fraction can be approximated as

\[ - f_{diff} = 1-\frac{R_{meas,h} - R_{clear,h}}{R_{clear,h}}, -\] + f_{diff} = 1-\frac{R_{meas,h} - R_{clear,h}}{R_{clear,h}}, + \]" src="form_210.png" width="206" height="36"/>

where it is enforced that $0\leq f_{diff} \leq 1$. The resulting flux that is output from the model is (flux perpendicular to the sun)

\[ - R_{model} = R_{clear}\frac{R_{meas,h}}{R_{clear,h}}. -\] + R_{model} = R_{clear}\frac{R_{meas,h}}{R_{clear,h}}. + \]" src="form_212.png" width="162" height="36"/>

In order to enable flux calibration for cloudy conditions, you must 1) Load timeseries data into the Context containing the measured all-wave solar radiation flux. This data must cover the entire period of the simulation. 2) Call SolarPosition::enableCloudCalibration(), which requires a string corresponding to the timeseries data value reference in (1). Below is a code example:

#include "SolarPosition"
@@ -332,7 +372,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_stomatal_conductance_model_8cpp.html b/doc/html/_stomatal_conductance_model_8cpp.html index fd67f6e23..4f32b41bf 100644 --- a/doc/html/_stomatal_conductance_model_8cpp.html +++ b/doc/html/_stomatal_conductance_model_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
StomatalConductanceModel.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_stomatal_conductance_model_8cpp_source.html b/doc/html/_stomatal_conductance_model_8cpp_source.html index fd03e62ba..be321fd22 100644 --- a/doc/html/_stomatal_conductance_model_8cpp_source.html +++ b/doc/html/_stomatal_conductance_model_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
StomatalConductanceModel.cpp
@@ -98,6 +110,7 @@
18using namespace std;
19using namespace helios;
20
+
21StomatalConductanceModel::StomatalConductanceModel( helios::Context* m_context ){
22 context = m_context;
23
@@ -128,7 +141,9 @@
48 model = "BMF"; //default model - Buckley, Mott, Farquhar
49
50}
+
51
+
52int StomatalConductanceModel::selfTest(){
53
54 Context context_selftest;
@@ -217,66 +232,86 @@
137 return 0;
138
139}
+
140
+
141void StomatalConductanceModel::setModelCoefficients(const BWBcoefficients &coeffs ){
142 BWBcoeffs = coeffs;
143 BWBmodel_coefficients.clear();
144 model = "BWB";
145}
+
146
+
147void StomatalConductanceModel::setModelCoefficients(const BWBcoefficients &coeffs, const std::vector<uint> &UUIDs ){
148 for( uint UUID : UUIDs){
149 BWBmodel_coefficients[UUID] = coeffs;
150 }
151 model = "BWB";
152}
+
153
+
154void StomatalConductanceModel::setModelCoefficients(const BBLcoefficients &coeffs ){
155 BBLcoeffs = coeffs;
156 BBLmodel_coefficients.clear();
157 model = "BBL";
158}
+
159
+
160void StomatalConductanceModel::setModelCoefficients(const BBLcoefficients &coeffs, const std::vector<uint> &UUIDs ){
161 for( uint UUID : UUIDs){
162 BBLmodel_coefficients[UUID] = coeffs;
163 }
164 model = "BBL";
165}
+
166
+
167void StomatalConductanceModel::setModelCoefficients(const MOPTcoefficients &coeffs ){
168 MOPTcoeffs = coeffs;
169 MOPTmodel_coefficients.clear();
170 model = "MOPT";
171}
+
172
+
173void StomatalConductanceModel::setModelCoefficients(const MOPTcoefficients &coeffs, const std::vector<uint> &UUIDs ){
174 for( uint UUID : UUIDs){
175 MOPTmodel_coefficients[UUID] = coeffs;
176 }
177 model = "MOPT";
178}
+
179
+
180void StomatalConductanceModel::setModelCoefficients(const BMFcoefficients &coeffs ){
181 BMFcoeffs = coeffs;
182 BMFmodel_coefficients.clear();
183 model = "BMF";
184}
+
185
+
186void StomatalConductanceModel::setModelCoefficients(const BMFcoefficients &coeffs, const std::vector<uint> &UUIDs ){
187 for( uint UUID : UUIDs){
188 BMFmodel_coefficients[UUID] = coeffs;
189 }
190 model = "BMF";
191}
+
192
+
193void StomatalConductanceModel::setBMFCoefficientsFromLibrary(const std::string &species_name) {
194 BMFcoefficients coeffs = getBMFCoefficientsFromLibrary(species_name);
195 BMFcoeffs = coeffs;
196 BMFmodel_coefficients.clear();
197 model = "BMF";
198}
+
199
+
200void StomatalConductanceModel::setBMFCoefficientsFromLibrary(const std::string &species, const std::vector<uint> &UUIDs) {
201 BMFcoefficients coeffs;
202 coeffs = getBMFCoefficientsFromLibrary(species);
@@ -285,7 +320,9 @@
205 }
206 model = "BMF";
207}
+
208
+
209BMFcoefficients StomatalConductanceModel::getBMFCoefficientsFromLibrary(const std::string &species) {
210 BMFcoefficients coeffs;
211 bool defaultSpecies = false;
@@ -390,43 +427,59 @@
310 }
311 return coeffs;
312}
+
313
+
314void StomatalConductanceModel::setModelCoefficients(const BBcoefficients &coeffs ){
315 BBcoeffs = coeffs;
316 BBmodel_coefficients.clear();
317 model = "BB";
318}
+
319
+
320void StomatalConductanceModel::setModelCoefficients(const BBcoefficients &coeffs, const std::vector<uint> &UUIDs ){
321 for( uint UUID : UUIDs){
322 BBmodel_coefficients[UUID] = coeffs;
323 }
324 model = "BB";
325}
+
326
+
327void StomatalConductanceModel::setDynamicTimeConstants( float tau_open, float tau_close ){
328 dynamic_time_constants.clear();
329 dynamic_time_constants[0] = make_vec2(tau_open,tau_close);
330}
+
331
+
332void StomatalConductanceModel::setDynamicTimeConstants( float tau_open, float tau_close, const std::vector<uint> &UUIDs ){
333 for( uint UUID : UUIDs){
334 dynamic_time_constants[UUID] = make_vec2(tau_open,tau_close);
335 }
336}
+
337
+
338void StomatalConductanceModel::run(){
339 run( context->getAllUUIDs() );
340}
+
341
+
342void StomatalConductanceModel::run( const std::vector<uint>& UUIDs ){
343 run( UUIDs, 0.f );
344}
+
345
+
346void StomatalConductanceModel::run( float dt ){
347 run( context->getAllUUIDs(), dt );
348}
+
349
+
350void StomatalConductanceModel::run( const std::vector<uint>& UUIDs, float dt ){
351
352 size_t assumed_default_An = 0;
@@ -756,6 +809,7 @@
676 }
677
678}
+
679
680float StomatalConductanceModel::evaluate_BWBmodel( float esurf, std::vector<float> &variables, const void* parameters ){
681
@@ -881,14 +935,19 @@
801
802}
803
+
804void StomatalConductanceModel::disableMessages(){
805 message_flag = false;
806}
+
807
+
808void StomatalConductanceModel::enableMessages(){
809 message_flag = true;
810}
+
811
+
812void StomatalConductanceModel::optionalOutputPrimitiveData( const char* label ){
813
814 if( strcmp(label,"vapor_pressure_deficit")==0 ){
@@ -900,11 +959,15 @@
820 }
821
822}
+
823
+
827
+
828void StomatalConductanceModel::printDefaultValueReport(const std::vector<uint> &UUIDs) const {
829
830 size_t assumed_default_i = 0;
@@ -1016,40 +1079,42 @@
936 std::cout << "------------------------------------------------------" << std::endl;
937
938}
-
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition: Context.h:47
+
+
helios::HELIOS_TYPE_FLOAT
@ HELIOS_TYPE_FLOAT
floating point data type
Definition Context.h:47
- -
StomatalConductanceModel::setDynamicTimeConstants
void setDynamicTimeConstants(float tau_open, float tau_close)
Set time constants for dynamic stomatal opening and closing for all primitives.
Definition: StomatalConductanceModel.cpp:327
-
StomatalConductanceModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition: StomatalConductanceModel.cpp:804
-
StomatalConductanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition: StomatalConductanceModel.cpp:824
-
StomatalConductanceModel::setBMFCoefficientsFromLibrary
void setBMFCoefficientsFromLibrary(const std::string &species)
Set the model coefficient values using one of the available species in the library.
Definition: StomatalConductanceModel.cpp:193
-
StomatalConductanceModel::enableMessages
void enableMessages()
Ensable output messages to the standard output.
Definition: StomatalConductanceModel.cpp:808
-
StomatalConductanceModel::StomatalConductanceModel
StomatalConductanceModel(helios::Context *m_context)
Default constructor.
Definition: StomatalConductanceModel.cpp:21
-
StomatalConductanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: StomatalConductanceModel.cpp:812
-
StomatalConductanceModel::selfTest
int selfTest()
Self-test (unit test) routine.
Definition: StomatalConductanceModel.cpp:52
-
StomatalConductanceModel::run
void run()
Update the stomatal conductance for all primitives in the context.
Definition: StomatalConductanceModel.cpp:338
-
StomatalConductanceModel::getBMFCoefficientsFromLibrary
BMFcoefficients getBMFCoefficientsFromLibrary(const std::string &species)
Get the model coefficient values using one of the available species in the library.
Definition: StomatalConductanceModel.cpp:209
-
StomatalConductanceModel::setModelCoefficients
void setModelCoefficients(const BWBcoefficients &coeffs)
Set the model coefficient values for all primitives - Ball, Woodrow, Berry model.
Definition: StomatalConductanceModel.cpp:141
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition: global.cpp:2977
-
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition: global.cpp:1146
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
BBLcoefficients
Coefficients for Ball, Berry, Leuning (Leuning 1990, 1995) stomatal conductance model.
Definition: StomatalConductanceModel.h:35
-
BBcoefficients
Coefficients for simplified Bailey stomatal conductance model.
Definition: StomatalConductanceModel.h:85
-
BMFcoefficients
Coefficients for simplified Buckley, Mott, & Farquhar stomatal conductance model.
Definition: StomatalConductanceModel.h:63
-
BWBcoefficients
Coefficients for original Ball, Woodrow, Berry (1987) stomatal conductance model.
Definition: StomatalConductanceModel.h:22
-
MOPTcoefficients
Coefficients for optimality-based Medlyn et al. (2011) stomatal conductance model.
Definition: StomatalConductanceModel.h:50
+ +
StomatalConductanceModel::setDynamicTimeConstants
void setDynamicTimeConstants(float tau_open, float tau_close)
Set time constants for dynamic stomatal opening and closing for all primitives.
Definition StomatalConductanceModel.cpp:327
+
StomatalConductanceModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition StomatalConductanceModel.cpp:804
+
StomatalConductanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition StomatalConductanceModel.cpp:824
+
StomatalConductanceModel::setBMFCoefficientsFromLibrary
void setBMFCoefficientsFromLibrary(const std::string &species)
Set the model coefficient values using one of the available species in the library.
Definition StomatalConductanceModel.cpp:193
+
StomatalConductanceModel::enableMessages
void enableMessages()
Ensable output messages to the standard output.
Definition StomatalConductanceModel.cpp:808
+
StomatalConductanceModel::StomatalConductanceModel
StomatalConductanceModel(helios::Context *m_context)
Default constructor.
Definition StomatalConductanceModel.cpp:21
+
StomatalConductanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition StomatalConductanceModel.cpp:812
+
StomatalConductanceModel::selfTest
int selfTest()
Self-test (unit test) routine.
Definition StomatalConductanceModel.cpp:52
+
StomatalConductanceModel::run
void run()
Update the stomatal conductance for all primitives in the context.
Definition StomatalConductanceModel.cpp:338
+
StomatalConductanceModel::getBMFCoefficientsFromLibrary
BMFcoefficients getBMFCoefficientsFromLibrary(const std::string &species)
Get the model coefficient values using one of the available species in the library.
Definition StomatalConductanceModel.cpp:209
+
StomatalConductanceModel::setModelCoefficients
void setModelCoefficients(const BWBcoefficients &coeffs)
Set the model coefficient values for all primitives - Ball, Woodrow, Berry model.
Definition StomatalConductanceModel.cpp:141
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::fzero
float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
Use Newton-Raphson method to find the zero of a function.
Definition global.cpp:2977
+
helios::max
float max(const std::vector< float > &vect)
Maximum value of a vector of floats.
Definition global.cpp:1146
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
BBLcoefficients
Coefficients for Ball, Berry, Leuning (Leuning 1990, 1995) stomatal conductance model.
Definition StomatalConductanceModel.h:35
+
BBcoefficients
Coefficients for simplified Bailey stomatal conductance model.
Definition StomatalConductanceModel.h:85
+
BMFcoefficients
Coefficients for simplified Buckley, Mott, & Farquhar stomatal conductance model.
Definition StomatalConductanceModel.h:63
+
BWBcoefficients
Coefficients for original Ball, Woodrow, Berry (1987) stomatal conductance model.
Definition StomatalConductanceModel.h:22
+
MOPTcoefficients
Coefficients for optimality-based Medlyn et al. (2011) stomatal conductance model.
Definition StomatalConductanceModel.h:50
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_stomatal_conductance_model_8h.html b/doc/html/_stomatal_conductance_model_8h.html index df9bcbd1f..c509a1b23 100644 --- a/doc/html/_stomatal_conductance_model_8h.html +++ b/doc/html/_stomatal_conductance_model_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -128,7 +140,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_stomatal_conductance_model_8h_source.html b/doc/html/_stomatal_conductance_model_8h_source.html index f5a42f51b..bff51f67b 100644 --- a/doc/html/_stomatal_conductance_model_8h_source.html +++ b/doc/html/_stomatal_conductance_model_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
StomatalConductanceModel.h
@@ -98,6 +110,7 @@
18
19#include "Context.h"
20
+
22struct BWBcoefficients{
23
24 BWBcoefficients(){
@@ -109,7 +122,9 @@
30 float a1; //unitless
31
32};
+
33
+
35struct BBLcoefficients{
36
37 BBLcoefficients(){
@@ -123,7 +138,9 @@
45 float D0; //mmol/mol
46
47};
+
48
+
50struct MOPTcoefficients{
51
52 MOPTcoefficients(){
@@ -135,7 +152,9 @@
58 float g1; //(kPa)^0.5
59
60};
+
61
+
63struct BMFcoefficients{
64
65 BMFcoefficients(){
@@ -155,8 +174,10 @@
79 float b; //mmol/mol
80
81};
+
82
83
+
85struct BBcoefficients{
86
87 BBcoefficients(){
@@ -174,12 +195,14 @@
99 float chi ; //mol/m^2-s-MPa
100
101};
+
102
+
103class StomatalConductanceModel{
104public:
105
107
-
110 explicit StomatalConductanceModel( helios::Context* m_context );
+
110 explicit StomatalConductanceModel( helios::Context* m_context );
111
113 int selfTest();
114
@@ -296,31 +319,34 @@
305 std::vector<std::string> output_prim_data;
306
307};
+
308
309#endif
- -
StomatalConductanceModel::setDynamicTimeConstants
void setDynamicTimeConstants(float tau_open, float tau_close)
Set time constants for dynamic stomatal opening and closing for all primitives.
Definition: StomatalConductanceModel.cpp:327
-
StomatalConductanceModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition: StomatalConductanceModel.cpp:804
+ +
StomatalConductanceModel::setDynamicTimeConstants
void setDynamicTimeConstants(float tau_open, float tau_close)
Set time constants for dynamic stomatal opening and closing for all primitives.
Definition StomatalConductanceModel.cpp:327
+
StomatalConductanceModel::disableMessages
void disableMessages()
Disable output messages to the standard output.
Definition StomatalConductanceModel.cpp:804
StomatalConductanceModel::setModelCoefficients
void setModelCoefficients(const std::vector< BMFcoefficients > &coeffs, const std::vector< uint > &UUIDs)
Set the model coefficient values for a subset of primitives based on their UUIDs.
-
StomatalConductanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition: StomatalConductanceModel.cpp:824
-
StomatalConductanceModel::setBMFCoefficientsFromLibrary
void setBMFCoefficientsFromLibrary(const std::string &species)
Set the model coefficient values using one of the available species in the library.
Definition: StomatalConductanceModel.cpp:193
-
StomatalConductanceModel::enableMessages
void enableMessages()
Ensable output messages to the standard output.
Definition: StomatalConductanceModel.cpp:808
-
StomatalConductanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: StomatalConductanceModel.cpp:812
-
StomatalConductanceModel::selfTest
int selfTest()
Self-test (unit test) routine.
Definition: StomatalConductanceModel.cpp:52
-
StomatalConductanceModel::run
void run()
Update the stomatal conductance for all primitives in the context.
Definition: StomatalConductanceModel.cpp:338
-
StomatalConductanceModel::getBMFCoefficientsFromLibrary
BMFcoefficients getBMFCoefficientsFromLibrary(const std::string &species)
Get the model coefficient values using one of the available species in the library.
Definition: StomatalConductanceModel.cpp:209
-
StomatalConductanceModel::setModelCoefficients
void setModelCoefficients(const BWBcoefficients &coeffs)
Set the model coefficient values for all primitives - Ball, Woodrow, Berry model.
Definition: StomatalConductanceModel.cpp:141
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
BBLcoefficients
Coefficients for Ball, Berry, Leuning (Leuning 1990, 1995) stomatal conductance model.
Definition: StomatalConductanceModel.h:35
-
BBcoefficients
Coefficients for simplified Bailey stomatal conductance model.
Definition: StomatalConductanceModel.h:85
-
BMFcoefficients
Coefficients for simplified Buckley, Mott, & Farquhar stomatal conductance model.
Definition: StomatalConductanceModel.h:63
-
BWBcoefficients
Coefficients for original Ball, Woodrow, Berry (1987) stomatal conductance model.
Definition: StomatalConductanceModel.h:22
-
MOPTcoefficients
Coefficients for optimality-based Medlyn et al. (2011) stomatal conductance model.
Definition: StomatalConductanceModel.h:50
+
StomatalConductanceModel::printDefaultValueReport
void printDefaultValueReport() const
Print a report detailing usage of default input values for all primitives in the Context.
Definition StomatalConductanceModel.cpp:824
+
StomatalConductanceModel::setBMFCoefficientsFromLibrary
void setBMFCoefficientsFromLibrary(const std::string &species)
Set the model coefficient values using one of the available species in the library.
Definition StomatalConductanceModel.cpp:193
+
StomatalConductanceModel::enableMessages
void enableMessages()
Ensable output messages to the standard output.
Definition StomatalConductanceModel.cpp:808
+
StomatalConductanceModel::StomatalConductanceModel
StomatalConductanceModel(helios::Context *m_context)
Default constructor.
Definition StomatalConductanceModel.cpp:21
+
StomatalConductanceModel::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition StomatalConductanceModel.cpp:812
+
StomatalConductanceModel::selfTest
int selfTest()
Self-test (unit test) routine.
Definition StomatalConductanceModel.cpp:52
+
StomatalConductanceModel::run
void run()
Update the stomatal conductance for all primitives in the context.
Definition StomatalConductanceModel.cpp:338
+
StomatalConductanceModel::getBMFCoefficientsFromLibrary
BMFcoefficients getBMFCoefficientsFromLibrary(const std::string &species)
Get the model coefficient values using one of the available species in the library.
Definition StomatalConductanceModel.cpp:209
+
StomatalConductanceModel::setModelCoefficients
void setModelCoefficients(const BWBcoefficients &coeffs)
Set the model coefficient values for all primitives - Ball, Woodrow, Berry model.
Definition StomatalConductanceModel.cpp:141
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
BBLcoefficients
Coefficients for Ball, Berry, Leuning (Leuning 1990, 1995) stomatal conductance model.
Definition StomatalConductanceModel.h:35
+
BBcoefficients
Coefficients for simplified Bailey stomatal conductance model.
Definition StomatalConductanceModel.h:85
+
BMFcoefficients
Coefficients for simplified Buckley, Mott, & Farquhar stomatal conductance model.
Definition StomatalConductanceModel.h:63
+
BWBcoefficients
Coefficients for original Ball, Woodrow, Berry (1987) stomatal conductance model.
Definition StomatalConductanceModel.h:22
+
MOPTcoefficients
Coefficients for optimality-based Medlyn et al. (2011) stomatal conductance model.
Definition StomatalConductanceModel.h:50
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_stomatal_doc.html b/doc/html/_stomatal_doc.html index cceca6dd7..c85b6dbae 100644 --- a/doc/html/_stomatal_doc.html +++ b/doc/html/_stomatal_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Stomatal Conductance Model Plugin Documentation
+
Stomatal Conductance Model Plugin Documentation

Table of Contents

-


@@ -175,7 +216,7 @@

Introduction

This plugin implements several different stomatal conductance models. A brief description of the theory behind each model is given below, along with coefficients obtained from several example species.

-

The default model is the Buckley, Mott, Farquhar model (see Buckley, Mott, Farquhar (2003) Model (simplified version given in Buckley, Turnbull, and Adams 2012)).

+

The default model is the Buckley, Mott, Farquhar model (see Buckley, Mott, Farquhar (2003) Model (simplified version given in Buckley, Turnbull, and Adams 2012)).

Ball, Woodrow, Berry (1987) Model Theory

The Ball, Woodrow, and Berry (1987) model is based on the empirical observation that stomatal conductance various roughly linearly with the net photosynthetic flux $A$ and relative humidity at the leaf surface $h_s$. They proposed the relationship:

@@ -422,7 +463,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_synthetic_annotation_8cpp.html b/doc/html/_synthetic_annotation_8cpp.html index ca3b98363..da34c226d 100644 --- a/doc/html/_synthetic_annotation_8cpp.html +++ b/doc/html/_synthetic_annotation_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
SyntheticAnnotation.cpp File Reference
@@ -107,7 +119,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_synthetic_annotation_8cpp_source.html b/doc/html/_synthetic_annotation_8cpp_source.html index 819c15ea6..d51dbb88d 100644 --- a/doc/html/_synthetic_annotation_8cpp_source.html +++ b/doc/html/_synthetic_annotation_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
SyntheticAnnotation.cpp
@@ -100,6 +112,7 @@
20using namespace std;
21using namespace helios;
22
+
23SyntheticAnnotation::SyntheticAnnotation( helios::Context* __context ){
24 context = __context;
25 objectdetection_enabled = true;
@@ -113,7 +126,9 @@
33 camera_position.push_back( make_vec3(1,0,1) );
34 camera_lookat.push_back( make_vec3(0, 0, 1) );
35}
+
36
+
37int SyntheticAnnotation::selfTest() const{
38
39 if( printmessages ) {
@@ -145,6 +160,7 @@
65 }
66
67}
+
68
69void SyntheticAnnotation::labelPrimitives( const char* label ){
70 labelPrimitives( context->getAllUUIDs(), label );
@@ -223,29 +239,41 @@
143 setCameraPosition( position, lookat );
144}
145
+
146void SyntheticAnnotation::enableObjectDetection(){
147 objectdetection_enabled = true;
148}
+
149
+
150void SyntheticAnnotation::disableObjectDetection(){
151 objectdetection_enabled = false;
152}
+
153
+
154void SyntheticAnnotation::enableSemanticSegmentation(){
155 semanticsegmentation_enabled = true;
156}
+
157
+
158void SyntheticAnnotation::disableSemanticSegmentation(){
159 semanticsegmentation_enabled = false;
160}
+
161
+
162void SyntheticAnnotation::enableInstanceSegmentation(){
163 instancesegmentation_enabled = true;
164}
+
165
+
166void SyntheticAnnotation::disableInstanceSegmentation(){
167 instancesegmentation_enabled = false;
168}
+
169
170void SyntheticAnnotation::setCameraPosition(const std::vector<helios::vec3> &a_camera_position, const std::vector<helios::vec3> &a_camera_lookat) {
171
@@ -257,6 +285,7 @@
177
178}
179
+
180void SyntheticAnnotation::render( const char* outputdir ) {
181
182 //todo: need to implement method for setting this
@@ -547,8 +576,8 @@
467 if( pixelcount>=labelminpixels ){
468
469 //todo: This doesn't actually take into account different label groups. Need to write in different format.
-
470 labelfile_rectoccluded << 0 << " " << (bbox.x + 0.5 * (bbox.y - bbox.x)) / float(framebufferW) << " "
-
471 << (bbox.z + 0.5 * (bbox.w - bbox.z)) / float(framebufferH) << " " << std::setprecision(6)
+
470 labelfile_rectoccluded << 0 << " " << (bbox.x + 0.5 * (bbox.y - bbox.x)) / float(framebufferW) << " "
+
471 << (bbox.z + 0.5 * (bbox.w - bbox.z)) / float(framebufferH) << " " << std::setprecision(6)
472 << std::fixed << (bbox.y - bbox.x) / float(framebufferW) << " "
473 << (bbox.w - bbox.z) / float(framebufferH) << std::endl;
474
@@ -718,6 +747,7 @@
638
639
640}
+
641
642uint SyntheticAnnotation::getGroupRectangularBBox( const uint ID, const std::vector<uint> &pixels, const uint framebuffer_width, const uint framebuffer_height, helios::int4& bbox ) const {
643
@@ -868,73 +898,74 @@
788 }
789 file.close();
790}
-
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition: Context.h:63
-
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition: Context.h:53
-
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition: Context.h:57
+
helios::HELIOS_TYPE_STRING
@ HELIOS_TYPE_STRING
std::string data type
Definition Context.h:63
+
helios::HELIOS_TYPE_VEC3
@ HELIOS_TYPE_VEC3
helios::vec3 data type
Definition Context.h:53
+
helios::HELIOS_TYPE_INT2
@ HELIOS_TYPE_INT2
helios::int2 data type
Definition Context.h:57
-
SyntheticAnnotation::disableInstanceSegmentation
void disableInstanceSegmentation()
Disable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition: SyntheticAnnotation.cpp:166
-
SyntheticAnnotation::disableObjectDetection
void disableObjectDetection()
Disable calculation and writing of rectangular bounding boxes for object detection when render() func...
Definition: SyntheticAnnotation.cpp:150
-
SyntheticAnnotation::SyntheticAnnotation
SyntheticAnnotation(helios::Context *context)
Synthetic image annotation plug-in default constructor.
Definition: SyntheticAnnotation.cpp:23
-
SyntheticAnnotation::selfTest
int selfTest() const
Function to perform a self-test of plug-in functions.
Definition: SyntheticAnnotation.cpp:37
-
SyntheticAnnotation::enableObjectDetection
void enableObjectDetection()
Enable calculation and writing of rectangular bounding boxes for object detection when render() funct...
Definition: SyntheticAnnotation.cpp:146
-
SyntheticAnnotation::disableSemanticSegmentation
void disableSemanticSegmentation()
Disable calculation and writing of object mask (full image) for semantic segmentation.
Definition: SyntheticAnnotation.cpp:158
-
SyntheticAnnotation::render
void render(const char *outputdir)
Render RGB image and generate annotations.
Definition: SyntheticAnnotation.cpp:180
-
SyntheticAnnotation::enableSemanticSegmentation
void enableSemanticSegmentation()
Enable calculation and writing of object mask (full image) for semantic segmentation.
Definition: SyntheticAnnotation.cpp:154
-
SyntheticAnnotation::enableInstanceSegmentation
void enableInstanceSegmentation()
Enable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition: SyntheticAnnotation.cpp:162
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
Visualizer::getWindowPixelsRGB
void getWindowPixelsRGB(uint *buffer)
Get R-G-B pixel data in the current display window.
Definition: Visualizer.cpp:899
-
Visualizer::printWindow
void printWindow()
Print the current graphics window to a JPEG image file. File will be given a default filename and sav...
Definition: Visualizer.cpp:875
-
Visualizer::buildContextGeometry
void buildContextGeometry(helios::Context *context_ptr)
Add all geometry from the Context to the visualizer.
Definition: Visualizer.cpp:2701
-
Visualizer::setLightDirection
void setLightDirection(const helios::vec3 &direction)
Set the direction of the light source.
Definition: Visualizer.cpp:788
-
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition: Visualizer.h:380
-
Visualizer::closeWindow
void closeWindow()
Close the graphics window.
Definition: Visualizer.cpp:973
-
Visualizer::setBackgroundColor
void setBackgroundColor(const helios::RGBcolor &color)
Set the background color for the visualizer window.
Definition: Visualizer.cpp:871
-
Visualizer::clearGeometry
void clearGeometry()
Clear all geometry previously added to the visualizer.
Definition: Visualizer.cpp:955
-
Visualizer::hideWatermark
void hideWatermark()
Make Helios logo watermark invisible.
Definition: Visualizer.cpp:978
-
Visualizer::plotUpdate
void plotUpdate()
Update the graphics window based on current geometry, then continue the program.
Definition: Visualizer.cpp:3578
-
Visualizer::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: Visualizer.cpp:770
-
Visualizer::getFramebufferSize
void getFramebufferSize(uint &width, uint &height) const
Get the size of the framebuffer in pixels.
Definition: Visualizer.cpp:950
-
Visualizer::addSkyDomeByCenter
void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
Definition: Visualizer.cpp:2200
-
Visualizer::setCameraPosition
void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
Set camera position.
Definition: Visualizer.cpp:774
-
Visualizer::setLightingModel
void setLightingModel(LightingModel lightingmodel)
Set the lighting model for shading of all primitives.
Definition: Visualizer.cpp:861
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition: Context.cpp:7139
-
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition: Context.cpp:7135
-
helios::Context::usePrimitiveTextureColor
void usePrimitiveTextureColor(uint UUID)
Use the texture map to color the primitive rather than the constant RGB color. This is function rever...
Definition: Context.cpp:7207
-
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition: Context_data.cpp:4533
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7197
-
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition: Context_data.cpp:4502
-
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition: Context_data.cpp:4128
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition: Context.cpp:7217
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::wait
void wait(float seconds)
Wait/sleep for a specified amount of time.
Definition: global.cpp:306
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_int4
int4 make_int4(int x, int y, int z, int w)
Make an int4 vector from three ints.
Definition: helios_vector_types.h:299
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int4
Vector of four elements of type 'int'.
Definition: helios_vector_types.h:243
-
helios::int4::x
int x
First element in vector.
Definition: helios_vector_types.h:247
-
helios::int4::z
int z
Third element in vector.
Definition: helios_vector_types.h:251
-
helios::int4::w
int w
Fourth element in vector.
Definition: helios_vector_types.h:253
-
helios::int4::y
int y
Second element in vector.
Definition: helios_vector_types.h:249
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
SyntheticAnnotation::disableInstanceSegmentation
void disableInstanceSegmentation()
Disable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition SyntheticAnnotation.cpp:166
+
SyntheticAnnotation::disableObjectDetection
void disableObjectDetection()
Disable calculation and writing of rectangular bounding boxes for object detection when render() func...
Definition SyntheticAnnotation.cpp:150
+
SyntheticAnnotation::SyntheticAnnotation
SyntheticAnnotation(helios::Context *context)
Synthetic image annotation plug-in default constructor.
Definition SyntheticAnnotation.cpp:23
+
SyntheticAnnotation::selfTest
int selfTest() const
Function to perform a self-test of plug-in functions.
Definition SyntheticAnnotation.cpp:37
+
SyntheticAnnotation::enableObjectDetection
void enableObjectDetection()
Enable calculation and writing of rectangular bounding boxes for object detection when render() funct...
Definition SyntheticAnnotation.cpp:146
+
SyntheticAnnotation::disableSemanticSegmentation
void disableSemanticSegmentation()
Disable calculation and writing of object mask (full image) for semantic segmentation.
Definition SyntheticAnnotation.cpp:158
+
SyntheticAnnotation::render
void render(const char *outputdir)
Render RGB image and generate annotations.
Definition SyntheticAnnotation.cpp:180
+
SyntheticAnnotation::enableSemanticSegmentation
void enableSemanticSegmentation()
Enable calculation and writing of object mask (full image) for semantic segmentation.
Definition SyntheticAnnotation.cpp:154
+
SyntheticAnnotation::enableInstanceSegmentation
void enableInstanceSegmentation()
Enable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition SyntheticAnnotation.cpp:162
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
Visualizer::getWindowPixelsRGB
void getWindowPixelsRGB(uint *buffer)
Get R-G-B pixel data in the current display window.
Definition Visualizer.cpp:903
+
Visualizer::printWindow
void printWindow()
Print the current graphics window to a JPEG image file. File will be given a default filename and sav...
Definition Visualizer.cpp:879
+
Visualizer::buildContextGeometry
void buildContextGeometry(helios::Context *context_ptr)
Add all geometry from the Context to the visualizer.
Definition Visualizer.cpp:2705
+
Visualizer::setLightDirection
void setLightDirection(const helios::vec3 &direction)
Set the direction of the light source.
Definition Visualizer.cpp:792
+
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition Visualizer.h:390
+
Visualizer::closeWindow
void closeWindow()
Close the graphics window.
Definition Visualizer.cpp:977
+
Visualizer::setBackgroundColor
void setBackgroundColor(const helios::RGBcolor &color)
Set the background color for the visualizer window.
Definition Visualizer.cpp:875
+
Visualizer::clearGeometry
void clearGeometry()
Clear all geometry previously added to the visualizer.
Definition Visualizer.cpp:959
+
Visualizer::hideWatermark
void hideWatermark()
Make Helios logo watermark invisible.
Definition Visualizer.cpp:982
+
Visualizer::plotUpdate
void plotUpdate()
Update the graphics window based on current geometry, then continue the program.
Definition Visualizer.cpp:3589
+
Visualizer::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition Visualizer.cpp:774
+
Visualizer::getFramebufferSize
void getFramebufferSize(uint &width, uint &height) const
Get the size of the framebuffer in pixels.
Definition Visualizer.cpp:954
+
Visualizer::addSkyDomeByCenter
void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
Definition Visualizer.cpp:2204
+
Visualizer::setCameraPosition
void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
Set camera position.
Definition Visualizer.cpp:778
+
Visualizer::setLightingModel
void setLightingModel(LightingModel lightingmodel)
Set the lighting model for shading of all primitives.
Definition Visualizer.cpp:865
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::setPrimitiveColor
void setPrimitiveColor(uint UUID, const helios::RGBcolor &color)
Method to set the diffuse color of a Primitive.
Definition Context.cpp:7139
+
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition Context.cpp:7135
+
helios::Context::usePrimitiveTextureColor
void usePrimitiveTextureColor(uint UUID)
Use the texture map to color the primitive rather than the constant RGB color. This is function rever...
Definition Context.cpp:7207
+
helios::Context::doesGlobalDataExist
bool doesGlobalDataExist(const char *label) const
Check if global data 'label' exists.
Definition Context_data.cpp:4533
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7197
+
helios::Context::getGlobalDataType
HeliosDataType getGlobalDataType(const char *label) const
Get the Helios data type of global data.
Definition Context_data.cpp:4502
+
helios::Context::getGlobalData
void getGlobalData(const char *label, int &data) const
Get global data value (scalar integer)
Definition Context_data.cpp:4128
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition Context.cpp:7217
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::wait
void wait(float seconds)
Wait/sleep for a specified amount of time.
Definition global.cpp:306
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_int4
int4 make_int4(int x, int y, int z, int w)
Make an int4 vector from three ints.
Definition helios_vector_types.h:299
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int4
Vector of four elements of type 'int'.
Definition helios_vector_types.h:243
+
helios::int4::x
int x
First element in vector.
Definition helios_vector_types.h:247
+
helios::int4::z
int z
Third element in vector.
Definition helios_vector_types.h:251
+
helios::int4::w
int w
Fourth element in vector.
Definition helios_vector_types.h:253
+
helios::int4::y
int y
Second element in vector.
Definition helios_vector_types.h:249
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_synthetic_annotation_8h.html b/doc/html/_synthetic_annotation_8h.html index f53610393..5aca9babf 100644 --- a/doc/html/_synthetic_annotation_8h.html +++ b/doc/html/_synthetic_annotation_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -114,7 +126,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_synthetic_annotation_8h_source.html b/doc/html/_synthetic_annotation_8h_source.html index f28762363..902e6bf7f 100644 --- a/doc/html/_synthetic_annotation_8h_source.html +++ b/doc/html/_synthetic_annotation_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
SyntheticAnnotation.h
@@ -99,11 +111,12 @@
20#include "Context.h"
21#include "Visualizer.h"
22
+
23class SyntheticAnnotation{
24public:
25
27
-
29 explicit SyntheticAnnotation( helios::Context* context );
+
29 explicit SyntheticAnnotation( helios::Context* context );
30
32 int selfTest( ) const;
33
@@ -180,28 +193,31 @@
111 void writePixelID( const char* filename, int labelminpixels, Visualizer* vis ) const;
112
113};
+
114
115#endif
- -
SyntheticAnnotation::disableInstanceSegmentation
void disableInstanceSegmentation()
Disable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition: SyntheticAnnotation.cpp:166
-
SyntheticAnnotation::disableObjectDetection
void disableObjectDetection()
Disable calculation and writing of rectangular bounding boxes for object detection when render() func...
Definition: SyntheticAnnotation.cpp:150
-
SyntheticAnnotation::selfTest
int selfTest() const
Function to perform a self-test of plug-in functions.
Definition: SyntheticAnnotation.cpp:37
-
SyntheticAnnotation::enableObjectDetection
void enableObjectDetection()
Enable calculation and writing of rectangular bounding boxes for object detection when render() funct...
Definition: SyntheticAnnotation.cpp:146
-
SyntheticAnnotation::disableSemanticSegmentation
void disableSemanticSegmentation()
Disable calculation and writing of object mask (full image) for semantic segmentation.
Definition: SyntheticAnnotation.cpp:158
-
SyntheticAnnotation::render
void render(const char *outputdir)
Render RGB image and generate annotations.
Definition: SyntheticAnnotation.cpp:180
-
SyntheticAnnotation::enableSemanticSegmentation
void enableSemanticSegmentation()
Enable calculation and writing of object mask (full image) for semantic segmentation.
Definition: SyntheticAnnotation.cpp:154
-
SyntheticAnnotation::enableInstanceSegmentation
void enableInstanceSegmentation()
Enable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition: SyntheticAnnotation.cpp:162
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::int4
Vector of four elements of type 'int'.
Definition: helios_vector_types.h:243
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
SyntheticAnnotation::disableInstanceSegmentation
void disableInstanceSegmentation()
Disable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition SyntheticAnnotation.cpp:166
+
SyntheticAnnotation::disableObjectDetection
void disableObjectDetection()
Disable calculation and writing of rectangular bounding boxes for object detection when render() func...
Definition SyntheticAnnotation.cpp:150
+
SyntheticAnnotation::SyntheticAnnotation
SyntheticAnnotation(helios::Context *context)
Synthetic image annotation plug-in default constructor.
Definition SyntheticAnnotation.cpp:23
+
SyntheticAnnotation::selfTest
int selfTest() const
Function to perform a self-test of plug-in functions.
Definition SyntheticAnnotation.cpp:37
+
SyntheticAnnotation::enableObjectDetection
void enableObjectDetection()
Enable calculation and writing of rectangular bounding boxes for object detection when render() funct...
Definition SyntheticAnnotation.cpp:146
+
SyntheticAnnotation::disableSemanticSegmentation
void disableSemanticSegmentation()
Disable calculation and writing of object mask (full image) for semantic segmentation.
Definition SyntheticAnnotation.cpp:158
+
SyntheticAnnotation::render
void render(const char *outputdir)
Render RGB image and generate annotations.
Definition SyntheticAnnotation.cpp:180
+
SyntheticAnnotation::enableSemanticSegmentation
void enableSemanticSegmentation()
Enable calculation and writing of object mask (full image) for semantic segmentation.
Definition SyntheticAnnotation.cpp:154
+
SyntheticAnnotation::enableInstanceSegmentation
void enableInstanceSegmentation()
Enable calculation and writing of un-occluded object masks for each object (instance segmentation)
Definition SyntheticAnnotation.cpp:162
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::int4
Vector of four elements of type 'int'.
Definition helios_vector_types.h:243
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_tutorials.html b/doc/html/_tutorials.html index 6f3dd9142..8840443a2 100644 --- a/doc/html/_tutorials.html +++ b/doc/html/_tutorials.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Tutorials
+
Tutorials

The following provides a several tutorials to help in getting started with the core Helios system and associated plug-ins. Programs associated with the tutorials can be found in the "samples" directory. Assuming that you have the necessary dependent software installed (see Dependencies), the samples/tutorials can be built by changing into the "build" subdirectory for the tutorial, then running the command "cmake .." followed by "make". This should generate an executable file with the same name as the tutorial directory.

@@ -123,7 +135,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_visualizer_8cpp.html b/doc/html/_visualizer_8cpp.html index 93218ca68..09aa58f25 100644 --- a/doc/html/_visualizer_8cpp.html +++ b/doc/html/_visualizer_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Data Structures | Macros | Typedefs | -Functions
+Functions | +Variables
Visualizer.cpp File Reference
@@ -116,35 +129,79 @@ - + - +

Macros

#define PNG_DEBUG   3
#define PNG_DEBUG   3
 
#define PNG_SKIP_SETJMP_CHECK   1
#define PNG_SKIP_SETJMP_CHECK   1
 
- +

Typedefs

typedef struct my_error_mgr * my_error_ptr
typedef struct my_error_mgr * my_error_ptr
 
- + - + - + - + - + - + + + + + + + + + + - + +

Functions

 METHODDEF (void) my_error_exit(j_common_ptr cinfo)
 METHODDEF (void) my_error_exit(j_common_ptr cinfo)
 
int read_JPEG_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
int read_JPEG_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
 Function to create a texture map from a JPEG image.
 
int write_JPEG_file (const char *filename, uint width, uint height, void *_window, bool print_messages)
int write_JPEG_file (const char *filename, uint width, uint height, void *_window, bool print_messages)
 Write current graphics window to a JPEG image file.
 
int write_JPEG_file (const char *filename, const uint width, const uint height, const std::vector< helios::RGBcolor > &data, bool print_messages)
int write_JPEG_file (const char *filename, const uint width, const uint height, const std::vector< helios::RGBcolor > &data, bool print_messages)
 
void read_png_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
void read_png_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
 Function to create a texture map from a PNG image.
 
std::string errorString (GLenum err)
void mouseCallback (GLFWwindow *window, int button, int action, int mods)
 Callback function for mouse button presses.
 
void cursorCallback (GLFWwindow *window, double xpos, double ypos)
 Callback function for mouse cursor movements.
 
void scrollCallback (GLFWwindow *window, double xoffset, double yoffset)
 Callback function for mouse scroll.
 
std::string errorString (GLenum err)
 
int checkerrors ()
int checkerrors ()
 
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

+Variables

float dphi = 0.0
 
float dtheta = 0.0
 
float dx = 0.0
 
float dy = 0.0
 
float dz = 0.0
 
float dx_m = 0.0
 
float dy_m = 0.0
 
float dscroll = 0.0
 
bool lbutton_down = false
 
bool rbutton_down = false
 
bool mbutton_down = false
 
double startX
 
double startY
 
double scrollX
 
double scrollY
 
bool scroll = false
 

Detailed Description

Visualizer plugin declarations.

@@ -213,13 +270,43 @@

int checkerrors ( - ) + ) + + + +

+ +

Definition at line 4509 of file Visualizer.cpp.

+ +
+
+ +

◆ cursorCallback()

+ +
+
+ + + + + + + + + + + + + +
void cursorCallback (GLFWwindow * window,
double xpos,
double ypos )
-

Definition at line 4421 of file Visualizer.cpp.

+

Callback function for mouse cursor movements.

+ +

Definition at line 4353 of file Visualizer.cpp.

@@ -232,14 +319,13 @@

std::string errorString ( - GLenum  - err) + GLenum err)

-

Definition at line 4396 of file Visualizer.cpp.

+

Definition at line 4484 of file Visualizer.cpp.

@@ -252,8 +338,7 @@

METHODDEF ( - void  - ) + void ) @@ -263,40 +348,66 @@

-

◆ read_JPEG_file()

+ +

◆ mouseCallback()

- + - - + - - + - - + - - + +
int read_JPEG_file void mouseCallback (const char * filename, GLFWwindow * window,
std::vector< unsigned char > & texture, int button,
uint & height, int action,
uint & width int mods )
+
+ +

Callback function for mouse button presses.

+ +

Definition at line 4339 of file Visualizer.cpp.

+ +
+
+ +

◆ read_JPEG_file()

+ +
+
+ + + + + + + - - + + + + + + + + + + +
int read_JPEG_file (const char * filename,
)std::vector< unsigned char > & texture,
uint & height,
uint & width )
@@ -325,31 +436,22 @@

void read_png_file ( - const char *  - filename, + const char * filename, - std::vector< unsigned char > &  - texture, + std::vector< unsigned char > & texture, - uint &  - height, + uint & height, - uint &  - width  - - - - ) - + uint & width )

@@ -369,46 +471,66 @@

-

◆ write_JPEG_file() [1/2]

+ +

◆ scrollCallback()

- + - - + + + + + + - - + + +
int write_JPEG_file void scrollCallback (const char * filename, GLFWwindow * window,
double xoffset,
const uint width, double yoffset )
+
+ +

Callback function for mouse scroll.

+ +

Definition at line 4371 of file Visualizer.cpp.

+ +
+
+ +

◆ write_JPEG_file() [1/2]

+ +
+
+ + + + + - - + - - + - - + + - - +
int write_JPEG_file (const char * filename,
const uint height, const uint width,
const std::vector< helios::RGBcolor > & data, const uint height,
bool print_messages const std::vector< helios::RGBcolor > & data,
)bool print_messages )
@@ -426,37 +548,27 @@

int write_JPEG_file ( - const char *  - filename, + const char * filename, - uint  - width, + uint width, - uint  - height, + uint height, - void *  - _window, + void * _window, - bool  - print_messages = true  - - - - ) - + bool print_messages = true )

@@ -475,12 +587,270 @@

Definition at line 130 of file Visualizer.cpp.

+

+
+

Variable Documentation

+ +

◆ dphi

+ +
+
+ + + + +
float dphi = 0.0
+
+ +

Definition at line 3296 of file Visualizer.cpp.

+ +
+
+ +

◆ dscroll

+ +
+
+ + + + +
float dscroll = 0.0
+
+ +

Definition at line 3303 of file Visualizer.cpp.

+ +
+
+ +

◆ dtheta

+ +
+
+ + + + +
float dtheta = 0.0
+
+ +

Definition at line 3297 of file Visualizer.cpp.

+ +
+
+ +

◆ dx

+ +
+
+ + + + +
float dx = 0.0
+
+ +

Definition at line 3298 of file Visualizer.cpp.

+ +
+
+ +

◆ dx_m

+ +
+
+ + + + +
float dx_m = 0.0
+
+ +

Definition at line 3301 of file Visualizer.cpp.

+ +
+
+ +

◆ dy

+ +
+
+ + + + +
float dy = 0.0
+
+ +

Definition at line 3299 of file Visualizer.cpp.

+ +
+
+ +

◆ dy_m

+ +
+
+ + + + +
float dy_m = 0.0
+
+ +

Definition at line 3302 of file Visualizer.cpp.

+ +
+
+ +

◆ dz

+ +
+
+ + + + +
float dz = 0.0
+
+ +

Definition at line 3300 of file Visualizer.cpp.

+ +
+
+ +

◆ lbutton_down

+ +
+
+ + + + +
bool lbutton_down = false
+
+ +

Definition at line 4331 of file Visualizer.cpp.

+ +
+
+ +

◆ mbutton_down

+ +
+
+ + + + +
bool mbutton_down = false
+
+ +

Definition at line 4333 of file Visualizer.cpp.

+ +
+
+ +

◆ rbutton_down

+ +
+
+ + + + +
bool rbutton_down = false
+
+ +

Definition at line 4332 of file Visualizer.cpp.

+ +
+
+ +

◆ scroll

+ +
+
+ + + + +
bool scroll = false
+
+ +

Definition at line 4336 of file Visualizer.cpp.

+ +
+
+ +

◆ scrollX

+ +
+
+ + + + +
double scrollX
+
+ +

Definition at line 4335 of file Visualizer.cpp.

+ +
+
+ +

◆ scrollY

+ +
+
+ + + + +
double scrollY
+
+ +

Definition at line 4335 of file Visualizer.cpp.

+ +
+
+ +

◆ startX

+ +
+
+ + + + +
double startX
+
+ +

Definition at line 4334 of file Visualizer.cpp.

+ +
+
+ +

◆ startY

+ +
+
+ + + + +
double startY
+
+ +

Definition at line 4334 of file Visualizer.cpp.

+
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_visualizer_8cpp_source.html b/doc/html/_visualizer_8cpp_source.html index 02154a1d4..ec9d992b5 100644 --- a/doc/html/_visualizer_8cpp_source.html +++ b/doc/html/_visualizer_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Visualizer.cpp
@@ -120,12 +132,14 @@
40
41using namespace helios;
42
+
43struct my_error_mgr {
44
45 struct jpeg_error_mgr pub; /* "public" fields */
46
47 jmp_buf setjmp_buffer; /* for return to caller */
48};
+
49typedef struct my_error_mgr * my_error_ptr;
50METHODDEF(void) my_error_exit (j_common_ptr cinfo){
51 /* cinfo->err really points to a my_error_mgr struct, so coerce pointer */
@@ -139,6 +153,7 @@
59 longjmp(myerr->setjmp_buffer, 1);
60}
61
+
62int read_JPEG_file (const char * filename, std::vector<unsigned char> &texture, uint & height, uint & width){
63
64 std::string fn = filename;
@@ -206,7 +221,9 @@
126
127 return 0;
128}
+
129
+
130int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages) {
131
132 if( print_messages ) {
@@ -279,6 +296,7 @@
199 return 1;
200
201}
+
202
203int write_JPEG_file(const char *filename, const uint width, const uint height, const std::vector<helios::RGBcolor> &data, bool print_messages) {
204
@@ -345,6 +363,7 @@
265
266}
267
+
268void read_png_file( const char* filename, std::vector<unsigned char> &texture, uint & height, uint & width){
269
270 std::string fn = filename;
@@ -434,22 +453,29 @@
354 png_destroy_read_struct(&png_ptr, &info_ptr, nullptr);
355
356}
+
357
+
358Visualizer::Visualizer( uint Wdisplay ) : colormap_current(), colormap_lava(), colormap_rainbow(), colormap_gray(), colormap_cool(), colormap_parula(), colormap_hot() {
359 initialize(Wdisplay, uint(std::round(Wdisplay * 0.8)), 16, true);
360}
+
361
+
362Visualizer::Visualizer(uint Wdisplay, uint Hdisplay ) : colormap_lava(), colormap_current(), colormap_cool(), colormap_rainbow(), colormap_parula(), colormap_gray(), colormap_hot() {
363 initialize(Wdisplay, Hdisplay, 16, true);
364}
+
365
366Visualizer::Visualizer(uint Wdisplay, uint Hdisplay, int aliasing_samples ) : colormap_lava(), colormap_cool(), colormap_rainbow(), colormap_current(), colormap_hot(), colormap_parula(), colormap_gray() {
367 initialize(Wdisplay, Hdisplay, aliasing_samples, true);
368}
369
+
370Visualizer::Visualizer(uint Wdisplay, uint Hdisplay, int aliasing_samples, bool window_decorations ) : colormap_current(), colormap_cool(), colormap_gray(), colormap_hot(), colormap_parula(), colormap_rainbow(), colormap_lava() {
371 initialize(Wdisplay, Hdisplay, aliasing_samples, window_decorations);
372}
+
373
374void Visualizer::openWindow(){
375
@@ -741,3950 +767,4239 @@
661
662 colormap_current = colormap_hot;
663
-
664 assert(checkerrors());
-
665
-
666}
+
664 glfwSetMouseButtonCallback( (GLFWwindow*) window, mouseCallback );
+
665 glfwSetCursorPosCallback( (GLFWwindow*) window, cursorCallback );
+
666 glfwSetScrollCallback( (GLFWwindow*) window, scrollCallback );
667
-
668Visualizer::~Visualizer(){
-
669 glDeleteFramebuffers(1, &framebufferID);
-
670 glDeleteTextures( 1, &depthTexture);
-
671 glDeleteBuffers( 1, &positionBuffer);
-
672 glDeleteBuffers(1, &colorBuffer);
-
673 glDeleteBuffers(1, &normalBuffer);
-
674 glDeleteBuffers(1, &uvBuffer);
-
675 glDeleteBuffers(1, &textureFlagBuffer);
-
676 glDeleteBuffers(1, &coordinateFlagBuffer);
-
677
-
678 for( auto iter=textureIDData.begin(); iter!=textureIDData.end(); ++iter ){
-
679 std::vector<int> ID = textureIDData.at(iter->first);
-
680 for(int i : ID){
-
681 uint IDu = uint(i);
-
682 glDeleteTextures(1, &IDu );
-
683 }
-
684 }
-
685
-
686 glfwDestroyWindow((GLFWwindow*)window);
-
687 glfwTerminate();
-
688}
+
668 assert(checkerrors());
+
669
+
670}
+
671
+
672Visualizer::~Visualizer(){
+
673 glDeleteFramebuffers(1, &framebufferID);
+
674 glDeleteTextures( 1, &depthTexture);
+
675 glDeleteBuffers( 1, &positionBuffer);
+
676 glDeleteBuffers(1, &colorBuffer);
+
677 glDeleteBuffers(1, &normalBuffer);
+
678 glDeleteBuffers(1, &uvBuffer);
+
679 glDeleteBuffers(1, &textureFlagBuffer);
+
680 glDeleteBuffers(1, &coordinateFlagBuffer);
+
681
+
682 for( auto iter=textureIDData.begin(); iter!=textureIDData.end(); ++iter ){
+
683 std::vector<int> ID = textureIDData.at(iter->first);
+
684 for(int i : ID){
+
685 uint IDu = uint(i);
+
686 glDeleteTextures(1, &IDu );
+
687 }
+
688 }
689
-
690int Visualizer::selfTest() {
-
691
-
692 if( message_flag ){
-
693 std::cout << "Running visualizer self-test..." << std::flush;
-
694 }
+
690 glfwDestroyWindow((GLFWwindow*)window);
+
691 glfwTerminate();
+
692}
+
693
+
+
694int Visualizer::selfTest() {
695
-
696 Visualizer visualizer( 1000 );
-
697
-
698 visualizer.setCameraPosition( make_SphericalCoord(10,0.49*M_PI,0), make_vec3(0,0,0) );
+
696 if( message_flag ){
+
697 std::cout << "Running visualizer self-test..." << std::flush;
+
698 }
699
-
700 visualizer.setLightingModel( Visualizer::LIGHTING_NONE );
+
700 Visualizer visualizer( 1000 );
701
-
702 //---- rectangles ----//
+
702 visualizer.setCameraPosition( make_SphericalCoord(10,0.49*M_PI,0), make_vec3(0,0,0) );
703
-
704 visualizer.addRectangleByCenter( make_vec3(-1.5,0,0), make_vec2(1,2), make_SphericalCoord(0.f,0.f), make_RGBAcolor(RGB::yellow,0.5), Visualizer::COORDINATES_CARTESIAN );
-
705 visualizer.addRectangleByCenter( make_vec3(-0.5,-0.5,0), make_vec2(1,1), make_SphericalCoord(0.f,0.f), RGB::blue, Visualizer::COORDINATES_CARTESIAN );
-
706 visualizer.addRectangleByCenter( make_vec3(-0.5,0.5,0), make_vec2(1,1), make_SphericalCoord(0.f,0.f), RGB::red, Visualizer::COORDINATES_CARTESIAN );
-
707 visualizer.addRectangleByCenter( make_vec3(1.5,0.5,0), make_vec2(3.41,1), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_logo.png", Visualizer::COORDINATES_CARTESIAN );
-
708 visualizer.addRectangleByCenter( make_vec3(1.5,-0.5,0), make_vec2(3.41,1), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_logo.jpeg", Visualizer::COORDINATES_CARTESIAN );
-
709
-
710 std::vector<vec3> vertices;
-
711 vertices.resize(4);
-
712
-
713 vertices.at(0) = make_vec3(-2,-1,0);
-
714 vertices.at(1) = make_vec3(-2,1,0);
-
715 vertices.at(2) = make_vec3(-3,0.5,0);
-
716 vertices.at(3) = make_vec3(-3,-0.5,0);
-
717 visualizer.addRectangleByVertices( vertices, RGB::green, Visualizer::COORDINATES_CARTESIAN );
-
718
-
719 vertices.at(0) = make_vec3(-3,-0.5,0);
-
720 vertices.at(1) = make_vec3(-3,0.5,0);
-
721 vertices.at(2) = make_vec3(-4,1,0);
-
722 vertices.at(3) = make_vec3(-4,-1,0);
-
723 visualizer.addRectangleByVertices( vertices, make_RGBAcolor(RGB::violet,0.5), Visualizer::COORDINATES_CARTESIAN );
-
724
-
725 vertices.at(0) = make_vec3(-4,-1,0);
-
726 vertices.at(1) = make_vec3(-4,1,0);
-
727 vertices.at(2) = make_vec3(-5,0.5,0);
-
728 vertices.at(3) = make_vec3(-5,-0.5,0);
-
729 visualizer.addRectangleByVertices( vertices, "plugins/visualizer/textures/Helios_logo.png", Visualizer::COORDINATES_CARTESIAN );
-
730
-
731 //---- triangles ----//
-
732
-
733 vec3 v0, v1, v2;
+
704 visualizer.setLightingModel( Visualizer::LIGHTING_NONE );
+
705
+
706 //---- rectangles ----//
+
707
+
708 visualizer.addRectangleByCenter( make_vec3(-1.5,0,0), make_vec2(1,2), make_SphericalCoord(0.f,0.f), make_RGBAcolor(RGB::yellow,0.5), Visualizer::COORDINATES_CARTESIAN );
+
709 visualizer.addRectangleByCenter( make_vec3(-0.5,-0.5,0), make_vec2(1,1), make_SphericalCoord(0.f,0.f), RGB::blue, Visualizer::COORDINATES_CARTESIAN );
+
710 visualizer.addRectangleByCenter( make_vec3(-0.5,0.5,0), make_vec2(1,1), make_SphericalCoord(0.f,0.f), RGB::red, Visualizer::COORDINATES_CARTESIAN );
+
711 visualizer.addRectangleByCenter( make_vec3(1.5,0.5,0), make_vec2(3.41,1), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_logo.png", Visualizer::COORDINATES_CARTESIAN );
+
712 visualizer.addRectangleByCenter( make_vec3(1.5,-0.5,0), make_vec2(3.41,1), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_logo.jpeg", Visualizer::COORDINATES_CARTESIAN );
+
713
+
714 std::vector<vec3> vertices;
+
715 vertices.resize(4);
+
716
+
717 vertices.at(0) = make_vec3(-2,-1,0);
+
718 vertices.at(1) = make_vec3(-2,1,0);
+
719 vertices.at(2) = make_vec3(-3,0.5,0);
+
720 vertices.at(3) = make_vec3(-3,-0.5,0);
+
721 visualizer.addRectangleByVertices( vertices, RGB::green, Visualizer::COORDINATES_CARTESIAN );
+
722
+
723 vertices.at(0) = make_vec3(-3,-0.5,0);
+
724 vertices.at(1) = make_vec3(-3,0.5,0);
+
725 vertices.at(2) = make_vec3(-4,1,0);
+
726 vertices.at(3) = make_vec3(-4,-1,0);
+
727 visualizer.addRectangleByVertices( vertices, make_RGBAcolor(RGB::violet,0.5), Visualizer::COORDINATES_CARTESIAN );
+
728
+
729 vertices.at(0) = make_vec3(-4,-1,0);
+
730 vertices.at(1) = make_vec3(-4,1,0);
+
731 vertices.at(2) = make_vec3(-5,0.5,0);
+
732 vertices.at(3) = make_vec3(-5,-0.5,0);
+
733 visualizer.addRectangleByVertices( vertices, "plugins/visualizer/textures/Helios_logo.png", Visualizer::COORDINATES_CARTESIAN );
734
-
735 v0 = make_vec3(-1,-3,0);
-
736 v1 = make_vec3(1,-3,0);
-
737 v2 = make_vec3(1,-4,0);
-
738 visualizer.addTriangle(v0,v1,v2,make_RGBAcolor(RGB::red,0.5), Visualizer::COORDINATES_CARTESIAN );
-
739
-
740 v0 = make_vec3(-1,-3,0);
-
741 v1 = make_vec3(-1,-4,0);
-
742 v2 = make_vec3(1,-4,0);
-
743 visualizer.addTriangle(v0,v1,v2,RGB::blue, Visualizer::COORDINATES_CARTESIAN );
-
744
-
745 //---- disks ----//
-
746
-
747 visualizer.addDiskByCenter( make_vec3(0,3,0), make_vec2(sqrtf(2)/2.f,sqrtf(2)/2.f), make_SphericalCoord(0,0), 50, RGB::blue, Visualizer::COORDINATES_CARTESIAN );
+
735 //---- triangles ----//
+
736
+
737 vec3 v0, v1, v2;
+
738
+
739 v0 = make_vec3(-1,-3,0);
+
740 v1 = make_vec3(1,-3,0);
+
741 v2 = make_vec3(1,-4,0);
+
742 visualizer.addTriangle(v0,v1,v2,make_RGBAcolor(RGB::red,0.5), Visualizer::COORDINATES_CARTESIAN );
+
743
+
744 v0 = make_vec3(-1,-3,0);
+
745 v1 = make_vec3(-1,-4,0);
+
746 v2 = make_vec3(1,-4,0);
+
747 visualizer.addTriangle(v0,v1,v2,RGB::blue, Visualizer::COORDINATES_CARTESIAN );
748
-
749 visualizer.addDiskByCenter( make_vec3(-3,3,0), make_vec2(sqrtf(2)/2.f,sqrtf(2)/2.f), make_SphericalCoord(0,0), 50, "plugins/visualizer/textures/compass.jpg", Visualizer::COORDINATES_CARTESIAN );
+
749 //---- disks ----//
750
-
751 //---- lines ----//
+
751 visualizer.addDiskByCenter( make_vec3(0,3,0), make_vec2(sqrtf(2)/2.f,sqrtf(2)/2.f), make_SphericalCoord(0,0), 50, RGB::blue, Visualizer::COORDINATES_CARTESIAN );
752
-
753 visualizer.addLine( make_vec3(-1,3,0), make_vec3(0,4,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
-
754 visualizer.addLine( make_vec3(0,4,0), make_vec3(1,3,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
-
755 visualizer.addLine( make_vec3(1,3,0), make_vec3(0,2,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
-
756 visualizer.addLine( make_vec3(0,2,0), make_vec3(-1,3,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
-
757
-
758 if( message_flag ){
-
759 std::cout << "done." << std::endl;
-
760 }
+
753 visualizer.addDiskByCenter( make_vec3(-3,3,0), make_vec2(sqrtf(2)/2.f,sqrtf(2)/2.f), make_SphericalCoord(0,0), 50, "plugins/visualizer/textures/compass.jpg", Visualizer::COORDINATES_CARTESIAN );
+
754
+
755 //---- lines ----//
+
756
+
757 visualizer.addLine( make_vec3(-1,3,0), make_vec3(0,4,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
+
758 visualizer.addLine( make_vec3(0,4,0), make_vec3(1,3,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
+
759 visualizer.addLine( make_vec3(1,3,0), make_vec3(0,2,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
+
760 visualizer.addLine( make_vec3(0,2,0), make_vec3(-1,3,0), RGB::red, 1, Visualizer::COORDINATES_CARTESIAN );
761
-
762 return 0;
-
763
-
764}
+
762 if( message_flag ){
+
763 std::cout << "done." << std::endl;
+
764 }
765
-
766void Visualizer::enableMessages() {
-
767 message_flag = true;
+
766 return 0;
+
767
768}
+
769
-
770void Visualizer::disableMessages() {
-
771 message_flag = false;
+
+
770void Visualizer::enableMessages() {
+
771 message_flag = true;
772}
+
773
-
774void Visualizer::setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt ){
-
775 camera_eye_location = cameraPosition;
-
776 camera_lookat_center = lookAt;
-
777}
-
778
-
779void Visualizer::setCameraPosition(const helios::SphericalCoord &cameraAngle, const helios::vec3 &lookAt ){
+
+
774void Visualizer::disableMessages() {
+
775 message_flag = false;
+
776}
+
+
777
+
+
778void Visualizer::setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt ){
+
779 camera_eye_location = cameraPosition;
780 camera_lookat_center = lookAt;
-
781 camera_eye_location = camera_lookat_center + sphere2cart(cameraAngle);vec3 camvec = camera_eye_location-camera_lookat_center;
-
782}
-
783
-
784void Visualizer::setCameraFieldOfView( float angle_FOV ){
-
785 camera_FOV = angle_FOV;
+
781}
+
+
782
+
+
783void Visualizer::setCameraPosition(const helios::SphericalCoord &cameraAngle, const helios::vec3 &lookAt ){
+
784 camera_lookat_center = lookAt;
+
785 camera_eye_location = camera_lookat_center + sphere2cart(cameraAngle);vec3 camvec = camera_eye_location-camera_lookat_center;
786}
+
787
-
788void Visualizer::setLightDirection(const helios::vec3 &direction ){
-
789
-
790 light_direction = direction/direction.magnitude();
-
791 primaryShader.setLightDirection(direction);
-
792
-
793}
-
794
-
795void Visualizer::getDomainBoundingBox( vec2& xbounds, vec2& ybounds, vec2& zbounds ) const{
+
+
788void Visualizer::setCameraFieldOfView( float angle_FOV ){
+
789 camera_FOV = angle_FOV;
+
790}
+
+
791
+
+
792void Visualizer::setLightDirection(const helios::vec3 &direction ){
+
793
+
794 light_direction = direction/direction.magnitude();
+
795 primaryShader.setLightDirection(direction);
796
-
797 xbounds.x = 1e8;
-
798 xbounds.y = -1e8;
-
799 ybounds.x = 1e8;
-
800 ybounds.y = -1e8;
-
801 zbounds.x = 1e8;
-
802 zbounds.y = -1e8;
-
803
-
804 for( std::map<std::string,std::vector<float> >::const_iterator iter = positionData.begin(); iter != positionData.end(); ++iter ){
-
805
-
806 std::string ptype = iter->first;
+
797}
+
+
798
+
+
799void Visualizer::getDomainBoundingBox( vec2& xbounds, vec2& ybounds, vec2& zbounds ) const{
+
800
+
801 xbounds.x = 1e8;
+
802 xbounds.y = -1e8;
+
803 ybounds.x = 1e8;
+
804 ybounds.y = -1e8;
+
805 zbounds.x = 1e8;
+
806 zbounds.y = -1e8;
807
-
808 std::vector<float> positions = iter->second;
+
808 for( std::map<std::string,std::vector<float> >::const_iterator iter = positionData.begin(); iter != positionData.end(); ++iter ){
809
-
810 for( size_t p=0; p<positions.size()/3; p++ ){
+
810 std::string ptype = iter->first;
811
-
812 if( coordinateFlagData.at(ptype).at(p)==COORDINATES_WINDOW_NORMALIZED ){
-
813 continue;
-
814 }
+
812 std::vector<float> positions = iter->second;
+
813
+
814 for( size_t p=0; p<positions.size()/3; p++ ){
815
-
816 vec3 verts;
-
817 verts.x = positions.at(p*3);
-
818 verts.y = positions.at(p*3+1);
-
819 verts.z = positions.at(p*3+2);
-
820
-
821 if( verts.x<xbounds.x ){
-
822 xbounds.x = verts.x;
-
823 }
-
824 if( verts.x>xbounds.y ){
-
825 xbounds.y = verts.x;
-
826 }
-
827 if( verts.y<ybounds.x ){
-
828 ybounds.x = verts.y;
-
829 }
-
830 if( verts.y>ybounds.y ){
-
831 ybounds.y = verts.y;
-
832 }
-
833 if( verts.z<zbounds.x ){
-
834 zbounds.x = verts.z;
-
835 }
-
836 if( verts.z>zbounds.y ){
-
837 zbounds.y = verts.z;
-
838 }
-
839 }
-
840
-
841 }
-
842
-
843 return;
+
816 if( coordinateFlagData.at(ptype).at(p)==COORDINATES_WINDOW_NORMALIZED ){
+
817 continue;
+
818 }
+
819
+
820 vec3 verts;
+
821 verts.x = positions.at(p*3);
+
822 verts.y = positions.at(p*3+1);
+
823 verts.z = positions.at(p*3+2);
+
824
+
825 if( verts.x<xbounds.x ){
+
826 xbounds.x = verts.x;
+
827 }
+
828 if( verts.x>xbounds.y ){
+
829 xbounds.y = verts.x;
+
830 }
+
831 if( verts.y<ybounds.x ){
+
832 ybounds.x = verts.y;
+
833 }
+
834 if( verts.y>ybounds.y ){
+
835 ybounds.y = verts.y;
+
836 }
+
837 if( verts.z<zbounds.x ){
+
838 zbounds.x = verts.z;
+
839 }
+
840 if( verts.z>zbounds.y ){
+
841 zbounds.y = verts.z;
+
842 }
+
843 }
844
-
845}
+
845 }
846
-
847float Visualizer::getDomainBoundingRadius() const{
+
847 return;
848
-
849 vec2 xbounds, ybounds, zbounds;
-
850 getDomainBoundingBox( xbounds, ybounds, zbounds );
-
851
-
852 vec3 R;
-
853 R.x = fmax( xbounds.x, xbounds.y );
-
854 R.y = fmax( ybounds.x, ybounds.y );
-
855 R.z = fmax( zbounds.x, zbounds.y );
-
856
-
857 return R.magnitude();
-
858
-
859}
+
849}
+
+
850
+
+
851float Visualizer::getDomainBoundingRadius() const{
+
852
+
853 vec2 xbounds, ybounds, zbounds;
+
854 getDomainBoundingBox( xbounds, ybounds, zbounds );
+
855
+
856 vec3 R;
+
857 R.x = fmax( xbounds.x, xbounds.y );
+
858 R.y = fmax( ybounds.x, ybounds.y );
+
859 R.z = fmax( zbounds.x, zbounds.y );
860
-
861void Visualizer::setLightingModel(LightingModel lightingmodel ){
-
862 for( uint i=0; i<primaryLightingModel.size(); i++ ){
-
863 primaryLightingModel.at(i) = lightingmodel;
-
864 }
-
865}
-
866
-
867void Visualizer::setLightIntensityFactor( float lightintensityfactor ){
-
868 lightintensity = lightintensityfactor;
+
861 return R.magnitude();
+
862
+
863}
+
+
864
+
+
865void Visualizer::setLightingModel(LightingModel lightingmodel ){
+
866 for( uint i=0; i<primaryLightingModel.size(); i++ ){
+
867 primaryLightingModel.at(i) = lightingmodel;
+
868 }
869}
+
870
-
871void Visualizer::setBackgroundColor(const helios::RGBcolor &color ){
-
872 backgroundColor = color;
+
+
871void Visualizer::setLightIntensityFactor( float lightintensityfactor ){
+
872 lightintensity = lightintensityfactor;
873}
+
874
-
875void Visualizer::printWindow() {
-
876
-
877 char outfile[100];
-
878 if( context!=nullptr ){//context has been given to visualizer via buildContextGeometry()
-
879 Date date = context->getDate();
-
880 Time time = context->getTime();
-
881 std::snprintf(outfile,100,"%02d-%02d-%4d_%02d-%02d-%02d_frame%d.jpg",date.day,date.month,date.year,time.hour,time.minute,time.second,frame_counter);
-
882 }else{
-
883 std::snprintf(outfile,100,"frame%d.jpg",frame_counter);
-
884 }
-
885 frame_counter++;
-
886
-
887 printWindow( outfile );
-
888}
-
889
-
890void Visualizer::printWindow( const char* outfile ){
-
891
-
892 std::string outfile_str = outfile;
-
893 validateOutputPath( outfile_str, {".jpeg", ".jpg", ".JPEG", ".JPG"} );
-
894
-
895 write_JPEG_file(outfile_str.c_str(), Wframebuffer, Hframebuffer, window, message_flag);
-
896
-
897}
+
+
875void Visualizer::setBackgroundColor(const helios::RGBcolor &color ){
+
876 backgroundColor = color;
+
877}
+
+
878
+
+
879void Visualizer::printWindow() {
+
880
+
881 char outfile[100];
+
882 if( context!=nullptr ){//context has been given to visualizer via buildContextGeometry()
+
883 Date date = context->getDate();
+
884 Time time = context->getTime();
+
885 std::snprintf(outfile,100,"%02d-%02d-%4d_%02d-%02d-%02d_frame%d.jpg",date.day,date.month,date.year,time.hour,time.minute,time.second,frame_counter);
+
886 }else{
+
887 std::snprintf(outfile,100,"frame%d.jpg",frame_counter);
+
888 }
+
889 frame_counter++;
+
890
+
891 printWindow( outfile );
+
892}
+
+
893
+
+
894void Visualizer::printWindow( const char* outfile ){
+
895
+
896 std::string outfile_str = outfile;
+
897 validateOutputPath( outfile_str, {".jpeg", ".jpg", ".JPEG", ".JPG"} );
898
-
899void Visualizer::getWindowPixelsRGB( uint * buffer ){
+
899 write_JPEG_file(outfile_str.c_str(), Wframebuffer, Hframebuffer, window, message_flag);
900
-
901 std::vector<GLubyte> buff;
-
902 buff.resize( 3*Wframebuffer*Hframebuffer );
-
903
-
904 glfwSwapBuffers((GLFWwindow*)window);
-
905 glReadPixels(0, 0, GLsizei(Wframebuffer), GLsizei(Hframebuffer), GL_RGB, GL_UNSIGNED_BYTE, &buff[0]);
-
906
-
907 //depending on the active frame buffer, we may get all zero data and need to swap it again.
-
908 bool zeros = true;
-
909 for( int i=0; i<3*Wframebuffer*Hframebuffer; i++ ){
-
910 if( buff[i]!=0 ){
-
911 zeros = false;
-
912 }
-
913 }
-
914 if( zeros ){
-
915
-
916 glfwSwapBuffers((GLFWwindow*)window);
-
917
-
918 glReadPixels(0, 0, GLsizei(Wframebuffer), GLsizei(Hframebuffer), GL_RGB, GL_UNSIGNED_BYTE, &buff[0]);
+
901}
+
+
902
+
+
903void Visualizer::getWindowPixelsRGB( uint * buffer ){
+
904
+
905 std::vector<GLubyte> buff;
+
906 buff.resize( 3*Wframebuffer*Hframebuffer );
+
907
+
908 glfwSwapBuffers((GLFWwindow*)window);
+
909 glReadPixels(0, 0, GLsizei(Wframebuffer), GLsizei(Hframebuffer), GL_RGB, GL_UNSIGNED_BYTE, &buff[0]);
+
910
+
911 //depending on the active frame buffer, we may get all zero data and need to swap it again.
+
912 bool zeros = true;
+
913 for( int i=0; i<3*Wframebuffer*Hframebuffer; i++ ){
+
914 if( buff[i]!=0 ){
+
915 zeros = false;
+
916 }
+
917 }
+
918 if( zeros ){
919
-
920 }
+
920 glfwSwapBuffers((GLFWwindow*)window);
921
-
922 //assert( checkerrors() );
+
922 glReadPixels(0, 0, GLsizei(Wframebuffer), GLsizei(Hframebuffer), GL_RGB, GL_UNSIGNED_BYTE, &buff[0]);
923
-
924 for( int i=0; i<3*Wframebuffer*Hframebuffer; i++ ){
-
925 buffer[i] = (unsigned int)buff[i];
-
926 }
+
924 }
+
925
+
926 //assert( checkerrors() );
927
-
928}
-
929
-
930void Visualizer::getDepthMap( float * buffer ){
+
928 for( int i=0; i<3*Wframebuffer*Hframebuffer; i++ ){
+
929 buffer[i] = (unsigned int)buff[i];
+
930 }
931
-
932 if( depth_buffer_data.empty() ){
-
933 helios_runtime_error("ERROR (Visualizer::getDepthMap): No depth map data available. You must run 'plotDepthMap' before depth map can be retrieved.");
-
934 }
+
932}
+
+
933
+
+
934void Visualizer::getDepthMap( float * buffer ){
935
-
936 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
-
937
-
938 for( int i=0; i<depth_buffer_data.size(); i++ ){
-
939 buffer[i] = -perspectiveTransformationMatrix[3].z/(depth_buffer_data.at(i) * -2.0f + 1.0f - perspectiveTransformationMatrix[2].z);
-
940 //buffer[i] = -(depth_buffer_data.at(i) * 2.0 - 1.0 - perspectiveTransformationMatrix[3].z)/perspectiveTransformationMatrix[2].z;
-
941 }
-
942
-
943}
-
944
-
945void Visualizer::getWindowSize( uint &width, uint &height ) const{
-
946 width = Wdisplay;
-
947 height = Hdisplay;
-
948}
-
949
-
950void Visualizer::getFramebufferSize( uint &width, uint &height ) const{
-
951 width = Wframebuffer;
-
952 height = Hframebuffer;
-
953}
-
954
-
955void Visualizer::clearGeometry() {
-
956 positionData.clear();
-
957 colorData.clear();
-
958 normalData.clear();
-
959 uvData.clear();
-
960 coordinateFlagData.clear();
-
961 textureFlagData.clear();
-
962 textureIDData.clear();
-
963 contextPrimitiveIDs.clear();
-
964 colorPrimitives_UUIDs.clear();
-
965 colorPrimitives_objIDs.clear();
-
966 contextPrimitiveIDs.clear();
-
967 depth_buffer_data.clear();
-
968 group_start.clear();
-
969 colorbar_min = 0;
-
970 colorbar_max = 0;
-
971}
-
972
-
973void Visualizer::closeWindow() {
-
974 glfwHideWindow( (GLFWwindow*) window);
-
975 glfwPollEvents();
-
976}
-
977
-
978void Visualizer::hideWatermark() {
-
979 isWatermarkVisible = false;
+
936 if( depth_buffer_data.empty() ){
+
937 helios_runtime_error("ERROR (Visualizer::getDepthMap): No depth map data available. You must run 'plotDepthMap' before depth map can be retrieved.");
+
938 }
+
939
+
940 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
+
941
+
942 for( int i=0; i<depth_buffer_data.size(); i++ ){
+
943 buffer[i] = -perspectiveTransformationMatrix[3].z/(depth_buffer_data.at(i) * -2.0f + 1.0f - perspectiveTransformationMatrix[2].z);
+
944 //buffer[i] = -(depth_buffer_data.at(i) * 2.0 - 1.0 - perspectiveTransformationMatrix[3].z)/perspectiveTransformationMatrix[2].z;
+
945 }
+
946
+
947}
+
+
948
+
+
949void Visualizer::getWindowSize( uint &width, uint &height ) const{
+
950 width = Wdisplay;
+
951 height = Hdisplay;
+
952}
+
+
953
+
+
954void Visualizer::getFramebufferSize( uint &width, uint &height ) const{
+
955 width = Wframebuffer;
+
956 height = Hframebuffer;
+
957}
+
+
958
+
+
959void Visualizer::clearGeometry() {
+
960 positionData.clear();
+
961 colorData.clear();
+
962 normalData.clear();
+
963 uvData.clear();
+
964 coordinateFlagData.clear();
+
965 textureFlagData.clear();
+
966 textureIDData.clear();
+
967 contextPrimitiveIDs.clear();
+
968 colorPrimitives_UUIDs.clear();
+
969 colorPrimitives_objIDs.clear();
+
970 contextPrimitiveIDs.clear();
+
971 depth_buffer_data.clear();
+
972 group_start.clear();
+
973 colorbar_min = 0;
+
974 colorbar_max = 0;
+
975}
+
+
976
+
+
977void Visualizer::closeWindow() {
+
978 glfwHideWindow( (GLFWwindow*) window);
+
979 glfwPollEvents();
980}
+
981
-
982void Visualizer::showWatermark() {
-
983 isWatermarkVisible = true;
+
+
982void Visualizer::hideWatermark() {
+
983 isWatermarkVisible = false;
984}
+
985
-
986void Visualizer::updatePerspectiveTransformation(const helios::vec3 &center, const helios::vec3 &eye ){
-
987
-
988 float m = fmax( fabs(center.x-eye.x), fmax( fabs(center.y-eye.y), fabs(center.z-eye.z) ) );
-
989 glm::mat4 Projection = glm::perspective( glm::radians(camera_FOV), float(Wdisplay)/float(Hdisplay), 0.01f*m, 100.f*m );
-
990 glm::mat4 View = glm::lookAt( glm::vec3(eye.x,eye.y,eye.z),glm::vec3(center.x,center.y,center.z),glm::vec3(0,0,1) );
+
+
986void Visualizer::showWatermark() {
+
987 isWatermarkVisible = true;
+
988}
+
+
989
+
990void Visualizer::updatePerspectiveTransformation(const helios::vec3 &center, const helios::vec3 &eye ){
991
-
992 perspectiveTransformationMatrix = Projection * View ;
-
993}
-
994
-
995void Visualizer::updateCustomTransformation(const glm::mat4 &matrix ){
-
996 customTransformationMatrix = matrix;
+
992 float m = fmax( fabs(center.x-eye.x), fmax( fabs(center.y-eye.y), fabs(center.z-eye.z) ) );
+
993 glm::mat4 Projection = glm::perspective( glm::radians(camera_FOV), float(Wdisplay)/float(Hdisplay), 0.01f*m, 100.f*m );
+
994 glm::mat4 View = glm::lookAt( glm::vec3(eye.x,eye.y,eye.z),glm::vec3(center.x,center.y,center.z),glm::vec3(0,0,1) );
+
995
+
996 perspectiveTransformationMatrix = Projection * View ;
997}
998
-
999void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color, CoordinateSystem coordFlag ){
-
1000 addRectangleByCenter( center, size, rotation, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
999void Visualizer::updateCustomTransformation(const glm::mat4 &matrix ){
+
1000 customTransformationMatrix = matrix;
1001}
1002
-
1003void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBAcolor &color, CoordinateSystem coordFlag ){
-
1004
-
1005 std::vector<vec3> vertices;
-
1006 vertices.resize(4);
-
1007
-
1008 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
-
1009 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1010 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1011 vertices.at(0) = center + v0;
-
1012
-
1013 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
-
1014 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1015 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1016 vertices.at(1) = center + v1;
-
1017
-
1018 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
-
1019 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1020 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1021 vertices.at(2) = center + v2;
-
1022
-
1023 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
-
1024 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1025 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1026 vertices.at(3) = center + v3;
-
1027
-
1028 addRectangleByVertices( vertices, color, coordFlag );
-
1029
-
1030}
+
+
1003void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color, CoordinateSystem coordFlag ){
+
1004 addRectangleByCenter( center, size, rotation, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1005}
+
+
1006
+
+
1007void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBAcolor &color, CoordinateSystem coordFlag ){
+
1008
+
1009 std::vector<vec3> vertices;
+
1010 vertices.resize(4);
+
1011
+
1012 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
+
1013 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1014 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1015 vertices.at(0) = center + v0;
+
1016
+
1017 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
+
1018 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1019 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1020 vertices.at(1) = center + v1;
+
1021
+
1022 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
+
1023 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1024 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1025 vertices.at(2) = center + v2;
+
1026
+
1027 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
+
1028 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1029 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1030 vertices.at(3) = center + v3;
1031
-
1032void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const char* texture_file, CoordinateSystem coordFlag ){
+
1032 addRectangleByVertices( vertices, color, coordFlag );
1033
-
1034 std::vector<vec3> vertices;
-
1035 vertices.resize(4);
-
1036
-
1037 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
-
1038 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1039 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1040 vertices.at(0) = center + v0;
-
1041
-
1042 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
-
1043 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1044 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1045 vertices.at(1) = center + v1;
-
1046
-
1047 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
-
1048 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1049 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1050 vertices.at(2) = center + v2;
-
1051
-
1052 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
-
1053 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1054 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1055 vertices.at(3) = center + v3;
-
1056
-
1057 addRectangleByVertices( vertices, texture_file, coordFlag );
-
1058
-
1059}
+
1034}
+
+
1035
+
+
1036void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const char* texture_file, CoordinateSystem coordFlag ){
+
1037
+
1038 std::vector<vec3> vertices;
+
1039 vertices.resize(4);
+
1040
+
1041 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
+
1042 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1043 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1044 vertices.at(0) = center + v0;
+
1045
+
1046 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
+
1047 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1048 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1049 vertices.at(1) = center + v1;
+
1050
+
1051 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
+
1052 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1053 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1054 vertices.at(2) = center + v2;
+
1055
+
1056 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
+
1057 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1058 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1059 vertices.at(3) = center + v3;
1060
-
1061void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag ){
+
1061 addRectangleByVertices( vertices, texture_file, coordFlag );
1062
-
1063 std::vector<vec3> vertices;
-
1064 vertices.resize(4);
-
1065
-
1066 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
-
1067 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1068 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1069 vertices.at(0) = center + v0;
-
1070
-
1071 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
-
1072 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1073 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1074 vertices.at(1) = center + v1;
-
1075
-
1076 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
-
1077 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1078 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1079 vertices.at(2) = center + v2;
-
1080
-
1081 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
-
1082 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1083 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1084 vertices.at(3) = center + v3;
-
1085
-
1086 addRectangleByVertices( vertices, color, texture_file, coordFlag );
-
1087
-
1088}
+
1063}
+
+
1064
+
+
1065void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag ){
+
1066
+
1067 std::vector<vec3> vertices;
+
1068 vertices.resize(4);
+
1069
+
1070 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
+
1071 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1072 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1073 vertices.at(0) = center + v0;
+
1074
+
1075 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
+
1076 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1077 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1078 vertices.at(1) = center + v1;
+
1079
+
1080 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
+
1081 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1082 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1083 vertices.at(2) = center + v2;
+
1084
+
1085 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
+
1086 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1087 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1088 vertices.at(3) = center + v3;
1089
-
1090void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag ){
+
1090 addRectangleByVertices( vertices, color, texture_file, coordFlag );
1091
-
1092 std::vector<vec3> vertices;
-
1093 vertices.resize(4);
-
1094
-
1095 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
-
1096 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1097 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1098 vertices.at(0) = center + v0;
-
1099
-
1100 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
-
1101 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1102 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1103 vertices.at(1) = center + v1;
-
1104
-
1105 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
-
1106 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1107 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1108 vertices.at(2) = center + v2;
-
1109
-
1110 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
-
1111 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
-
1112 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
-
1113 vertices.at(3) = center + v3;
-
1114
-
1115 addRectangleByVertices( vertices, color, glyph, coordFlag );
-
1116
-
1117}
+
1092}
+
+
1093
+
+
1094void Visualizer::addRectangleByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag ){
+
1095
+
1096 std::vector<vec3> vertices;
+
1097 vertices.resize(4);
+
1098
+
1099 vec3 v0 = make_vec3( -0.5f*size.x, - 0.5f*size.y, 0.f );
+
1100 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1101 v0 = rotatePointAboutLine( v0, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1102 vertices.at(0) = center + v0;
+
1103
+
1104 vec3 v1 = make_vec3( +0.5f*size.x, - 0.5f*size.y, 0.f );
+
1105 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1106 v1 = rotatePointAboutLine( v1, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1107 vertices.at(1) = center + v1;
+
1108
+
1109 vec3 v2 = make_vec3( +0.5f*size.x, +0.5f*size.y, 0.f );
+
1110 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1111 v2 = rotatePointAboutLine( v2, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1112 vertices.at(2) = center + v2;
+
1113
+
1114 vec3 v3 = make_vec3( -0.5f*size.x, +0.5f*size.y, 0.f );
+
1115 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(1,0,0), -rotation.elevation );
+
1116 v3 = rotatePointAboutLine( v3, make_vec3(0,0,0), make_vec3(0,0,1), -rotation.azimuth );
+
1117 vertices.at(3) = center + v3;
1118
-
1119void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBcolor &color, CoordinateSystem coordFlag ){
-
1120 addRectangleByVertices( vertices, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1119 addRectangleByVertices( vertices, color, glyph, coordFlag );
+
1120
1121}
+
1122
-
1123void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBAcolor &color, CoordinateSystem coordFlag ){
-
1124
-
1125 std::vector<vec3> v = vertices; //make a copy so we can modify
+
+
1123void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBcolor &color, CoordinateSystem coordFlag ){
+
1124 addRectangleByVertices( vertices, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1125}
+
1126
-
1127 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
+
1127void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBAcolor &color, CoordinateSystem coordFlag ){
1128
-
1129 //Check that coordinates are inside drawable area
-
1130 for(auto vertex : vertices){
-
1131 if(vertex.x < 0.f || vertex.x > 1.f ){
-
1132 if( message_flag ){
-
1133 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
-
1134 }
-
1135 }else if(vertex.y < 0.f || vertex.y > 1.f ){
+
1129 std::vector<vec3> v = vertices; //make a copy so we can modify
+
1130
+
1131 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
1132
+
1133 //Check that coordinates are inside drawable area
+
1134 for(auto vertex : vertices){
+
1135 if(vertex.x < 0.f || vertex.x > 1.f ){
1136 if( message_flag ){
-
1137 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
+
1137 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
1138 }
-
1139 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1139 }else if(vertex.y < 0.f || vertex.y > 1.f ){
1140 if( message_flag ){
-
1141 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1141 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
1142 }
-
1143 }
-
1144 }
-
1145
-
1146 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1147 for( uint i=0; i<vertices.size(); i++ ){
-
1148 v.at(i).x = 2.f*v.at(i).x - 1.f;
-
1149 v.at(i).y = 2.f*v.at(i).y - 1.f;
-
1150 }
-
1151
-
1152 }
-
1153
-
1154 std::vector<float> position_data, color_data, normal_data, uv_data;
-
1155 position_data.resize(18,0);
-
1156 color_data.resize(24,0);
-
1157 normal_data.resize(18,0);
-
1158 uv_data.resize(12,0);
-
1159
-
1160 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
-
1161 normal.normalize();
-
1162
-
1163 for( int i=0; i<6; i++ ){
-
1164 color_data.at(i*4) = color.r;
-
1165 color_data.at(i*4+1) = color.g;
-
1166 color_data.at(i*4+2) = color.b;
-
1167 color_data.at(i*4+3) = color.a;
-
1168
-
1169 normal_data.at(i*3) = normal.x;
-
1170 normal_data.at(i*3+1) = normal.y;
-
1171 normal_data.at(i*3+2) = normal.z;
-
1172 }
-
1173
-
1174 //Lower left vertex
-
1175 position_data.at(0) = v.at(0).x;
-
1176 position_data.at(1) = v.at(0).y;
-
1177 position_data.at(2) = v.at(0).z;
-
1178
-
1179 //Lower right vertex
-
1180 position_data.at(3) = v.at(1).x;
-
1181 position_data.at(4) = v.at(1).y;
-
1182 position_data.at(5) = v.at(1).z;
-
1183
-
1184 //Upper right vertex
-
1185 position_data.at(6) = v.at(2).x;
-
1186 position_data.at(7) = v.at(2).y;
-
1187 position_data.at(8) = v.at(2).z;
-
1188
-
1189 //Lower left vertex
-
1190 position_data.at(9) = v.at(0).x;
-
1191 position_data.at(10) = v.at(0).y;
-
1192 position_data.at(11) = v.at(0).z;
-
1193
-
1194 //Upper right vertex
-
1195 position_data.at(12) = v.at(2).x;
-
1196 position_data.at(13) = v.at(2).y;
-
1197 position_data.at(14) = v.at(2).z;
-
1198
-
1199 //Upper left vertex
-
1200 position_data.at(15) = v.at(3).x;
-
1201 position_data.at(16) = v.at(3).y;
-
1202 position_data.at(17) = v.at(3).z;
-
1203
-
1204 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1205 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1206 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1207 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1208
-
1209 std::vector<int> texture_data;
-
1210 std::vector<int> coord_data;
-
1211 texture_data.resize(6,0);
-
1212 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1213 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1214 coord_data.resize(6,coordFlag);
-
1215 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1216
-
1217}
-
1218
-
1219void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const char* texture_file, CoordinateSystem coordFlag ){
-
1220 std::vector<vec2> uvs;
-
1221 uvs.resize(4);
-
1222 uvs.at(0) = make_vec2(0,0);
-
1223 uvs.at(1) = make_vec2(1,0);
-
1224 uvs.at(2) = make_vec2(1,1);
-
1225 uvs.at(3) = make_vec2(0,1);
-
1226 addRectangleByVertices(vertices,texture_file,uvs,coordFlag);
-
1227}
-
1228
-
1229void Visualizer::addRectangleByVertices(const std::vector<vec3> &vertices, const char* texture_file, const std::vector<vec2> &uvs, CoordinateSystem coordFlag ){
-
1230
-
1231 std::vector<vec3> v = vertices; //make a copy so we can modify
+
1143 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1144 if( message_flag ){
+
1145 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1146 }
+
1147 }
+
1148 }
+
1149
+
1150 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1151 for( uint i=0; i<vertices.size(); i++ ){
+
1152 v.at(i).x = 2.f*v.at(i).x - 1.f;
+
1153 v.at(i).y = 2.f*v.at(i).y - 1.f;
+
1154 }
+
1155
+
1156 }
+
1157
+
1158 std::vector<float> position_data, color_data, normal_data, uv_data;
+
1159 position_data.resize(18,0);
+
1160 color_data.resize(24,0);
+
1161 normal_data.resize(18,0);
+
1162 uv_data.resize(12,0);
+
1163
+
1164 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
+
1165 normal.normalize();
+
1166
+
1167 for( int i=0; i<6; i++ ){
+
1168 color_data.at(i*4) = color.r;
+
1169 color_data.at(i*4+1) = color.g;
+
1170 color_data.at(i*4+2) = color.b;
+
1171 color_data.at(i*4+3) = color.a;
+
1172
+
1173 normal_data.at(i*3) = normal.x;
+
1174 normal_data.at(i*3+1) = normal.y;
+
1175 normal_data.at(i*3+2) = normal.z;
+
1176 }
+
1177
+
1178 //Lower left vertex
+
1179 position_data.at(0) = v.at(0).x;
+
1180 position_data.at(1) = v.at(0).y;
+
1181 position_data.at(2) = v.at(0).z;
+
1182
+
1183 //Lower right vertex
+
1184 position_data.at(3) = v.at(1).x;
+
1185 position_data.at(4) = v.at(1).y;
+
1186 position_data.at(5) = v.at(1).z;
+
1187
+
1188 //Upper right vertex
+
1189 position_data.at(6) = v.at(2).x;
+
1190 position_data.at(7) = v.at(2).y;
+
1191 position_data.at(8) = v.at(2).z;
+
1192
+
1193 //Lower left vertex
+
1194 position_data.at(9) = v.at(0).x;
+
1195 position_data.at(10) = v.at(0).y;
+
1196 position_data.at(11) = v.at(0).z;
+
1197
+
1198 //Upper right vertex
+
1199 position_data.at(12) = v.at(2).x;
+
1200 position_data.at(13) = v.at(2).y;
+
1201 position_data.at(14) = v.at(2).z;
+
1202
+
1203 //Upper left vertex
+
1204 position_data.at(15) = v.at(3).x;
+
1205 position_data.at(16) = v.at(3).y;
+
1206 position_data.at(17) = v.at(3).z;
+
1207
+
1208 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1209 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1210 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1211 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1212
+
1213 std::vector<int> texture_data;
+
1214 std::vector<int> coord_data;
+
1215 texture_data.resize(6,0);
+
1216 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1217 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1218 coord_data.resize(6,coordFlag);
+
1219 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
+
1220
+
1221}
+
+
1222
+
+
1223void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const char* texture_file, CoordinateSystem coordFlag ){
+
1224 std::vector<vec2> uvs;
+
1225 uvs.resize(4);
+
1226 uvs.at(0) = make_vec2(0,0);
+
1227 uvs.at(1) = make_vec2(1,0);
+
1228 uvs.at(2) = make_vec2(1,1);
+
1229 uvs.at(3) = make_vec2(0,1);
+
1230 addRectangleByVertices(vertices,texture_file,uvs,coordFlag);
+
1231}
+
1232
-
1233 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
+
1233void Visualizer::addRectangleByVertices(const std::vector<vec3> &vertices, const char* texture_file, const std::vector<vec2> &uvs, CoordinateSystem coordFlag ){
1234
-
1235 //Check that coordinates are inside drawable area
-
1236 for(auto vertex : vertices){
-
1237 if(vertex.x < 0.f || vertex.x > 1.f ){
-
1238 if( message_flag ){
-
1239 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
-
1240 }
-
1241 }else if(vertex.y < 0.f || vertex.y > 1.f ){
+
1235 std::vector<vec3> v = vertices; //make a copy so we can modify
+
1236
+
1237 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
1238
+
1239 //Check that coordinates are inside drawable area
+
1240 for(auto vertex : vertices){
+
1241 if(vertex.x < 0.f || vertex.x > 1.f ){
1242 if( message_flag ){
-
1243 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
+
1243 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
1244 }
-
1245 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1245 }else if(vertex.y < 0.f || vertex.y > 1.f ){
1246 if( message_flag ){
-
1247 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1247 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
1248 }
-
1249 }
-
1250 }
-
1251
-
1252 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1253 for( uint i=0; i<vertices.size(); i++ ){
-
1254 v.at(i).x = 2.f*v.at(i).x - 1.f;
-
1255 v.at(i).y = 2.f*v.at(i).y - 1.f;
-
1256 }
-
1257
-
1258 }
-
1259
-
1260 uint textureID;
-
1261 int2 texture_size;
-
1262 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1249 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1250 if( message_flag ){
+
1251 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1252 }
+
1253 }
+
1254 }
+
1255
+
1256 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1257 for( uint i=0; i<vertices.size(); i++ ){
+
1258 v.at(i).x = 2.f*v.at(i).x - 1.f;
+
1259 v.at(i).y = 2.f*v.at(i).y - 1.f;
+
1260 }
+
1261
+
1262 }
1263
-
1264 std::vector<float> position_data, color_data, normal_data, uv_data;
-
1265 position_data.resize(18,0);
-
1266 color_data.resize(24,0);
-
1267 normal_data.resize(18,0);
-
1268 uv_data.resize(12,0);
-
1269
-
1270 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
-
1271 normal.normalize();
-
1272
-
1273 for( int i=0; i<6; i++ ){
-
1274 normal_data.at(i*3) = normal.x;
-
1275 normal_data.at(i*3+1) = normal.y;
-
1276 normal_data.at(i*3+2) = normal.z;
-
1277 }
-
1278
-
1279 //Lower left vertex
-
1280 position_data.at(0) = v.at(0).x;
-
1281 position_data.at(1) = v.at(0).y;
-
1282 position_data.at(2) = v.at(0).z;
-
1283 uv_data.at(0) = uvs.at(0).x*float(texture_size.x-1);
-
1284 uv_data.at(1) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
-
1285
-
1286 //Lower right vertex
-
1287 position_data.at(3) = v.at(1).x;
-
1288 position_data.at(4) = v.at(1).y;
-
1289 position_data.at(5) = v.at(1).z;
-
1290 uv_data.at(2) = uvs.at(1).x*float(texture_size.x-1);
-
1291 uv_data.at(3) = (1.f-uvs.at(1).y)*float(texture_size.y-1);
-
1292
-
1293 //Upper right vertex
-
1294 position_data.at(6) = v.at(2).x;
-
1295 position_data.at(7) = v.at(2).y;
-
1296 position_data.at(8) = v.at(2).z;
-
1297 uv_data.at(4) = uvs.at(2).x*float(texture_size.x-1);
-
1298 uv_data.at(5) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
-
1299
-
1300 //Lower left vertex
-
1301 position_data.at(9) = v.at(0).x;
-
1302 position_data.at(10) = v.at(0).y;
-
1303 position_data.at(11) = v.at(0).z;
-
1304 uv_data.at(6) = uvs.at(0).x*float(texture_size.x-1);
-
1305 uv_data.at(7) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
-
1306
-
1307 //Upper right vertex
-
1308 position_data.at(12) = v.at(2).x;
-
1309 position_data.at(13) = v.at(2).y;
-
1310 position_data.at(14) = v.at(2).z;
-
1311 uv_data.at(8) = uvs.at(2).x*float(texture_size.x-1);
-
1312 uv_data.at(9) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
-
1313
-
1314 //Upper left vertex
-
1315 position_data.at(15) = v.at(3).x;
-
1316 position_data.at(16) = v.at(3).y;
-
1317 position_data.at(17) = v.at(3).z;
-
1318 uv_data.at(10) = uvs.at(3).x*float(texture_size.x-1);
-
1319 uv_data.at(11) = (1.f-uvs.at(3).y)*float(texture_size.y-1);
-
1320
-
1321 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1322 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1323 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1324 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1325
-
1326 std::vector<int> texture_data, coord_data;
-
1327 texture_data.resize(6,1);
-
1328 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1329 texture_data.assign(6, textureID);
-
1330 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1331 coord_data.resize(6,coordFlag);
-
1332 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1333
-
1334}
-
1335
-
1336void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag ){
-
1337 std::vector<vec2> uvs;
-
1338 uvs.resize(4);
-
1339 uvs.at(0) = make_vec2(0,0);
-
1340 uvs.at(1) = make_vec2(1,0);
-
1341 uvs.at(2) = make_vec2(1,1);
-
1342 uvs.at(3) = make_vec2(0,1);
-
1343 addRectangleByVertices( vertices, color, texture_file, uvs, coordFlag );
-
1344
-
1345}
-
1346
-
1347void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const helios::RGBcolor &color, const char* texture_file, const std::vector<vec2> &uvs, CoordinateSystem coordFlag ){
+
1264 uint textureID;
+
1265 int2 texture_size;
+
1266 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1267
+
1268 std::vector<float> position_data, color_data, normal_data, uv_data;
+
1269 position_data.resize(18,0);
+
1270 color_data.resize(24,0);
+
1271 normal_data.resize(18,0);
+
1272 uv_data.resize(12,0);
+
1273
+
1274 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
+
1275 normal.normalize();
+
1276
+
1277 for( int i=0; i<6; i++ ){
+
1278 normal_data.at(i*3) = normal.x;
+
1279 normal_data.at(i*3+1) = normal.y;
+
1280 normal_data.at(i*3+2) = normal.z;
+
1281 }
+
1282
+
1283 //Lower left vertex
+
1284 position_data.at(0) = v.at(0).x;
+
1285 position_data.at(1) = v.at(0).y;
+
1286 position_data.at(2) = v.at(0).z;
+
1287 uv_data.at(0) = uvs.at(0).x*float(texture_size.x-1);
+
1288 uv_data.at(1) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
+
1289
+
1290 //Lower right vertex
+
1291 position_data.at(3) = v.at(1).x;
+
1292 position_data.at(4) = v.at(1).y;
+
1293 position_data.at(5) = v.at(1).z;
+
1294 uv_data.at(2) = uvs.at(1).x*float(texture_size.x-1);
+
1295 uv_data.at(3) = (1.f-uvs.at(1).y)*float(texture_size.y-1);
+
1296
+
1297 //Upper right vertex
+
1298 position_data.at(6) = v.at(2).x;
+
1299 position_data.at(7) = v.at(2).y;
+
1300 position_data.at(8) = v.at(2).z;
+
1301 uv_data.at(4) = uvs.at(2).x*float(texture_size.x-1);
+
1302 uv_data.at(5) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
+
1303
+
1304 //Lower left vertex
+
1305 position_data.at(9) = v.at(0).x;
+
1306 position_data.at(10) = v.at(0).y;
+
1307 position_data.at(11) = v.at(0).z;
+
1308 uv_data.at(6) = uvs.at(0).x*float(texture_size.x-1);
+
1309 uv_data.at(7) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
+
1310
+
1311 //Upper right vertex
+
1312 position_data.at(12) = v.at(2).x;
+
1313 position_data.at(13) = v.at(2).y;
+
1314 position_data.at(14) = v.at(2).z;
+
1315 uv_data.at(8) = uvs.at(2).x*float(texture_size.x-1);
+
1316 uv_data.at(9) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
+
1317
+
1318 //Upper left vertex
+
1319 position_data.at(15) = v.at(3).x;
+
1320 position_data.at(16) = v.at(3).y;
+
1321 position_data.at(17) = v.at(3).z;
+
1322 uv_data.at(10) = uvs.at(3).x*float(texture_size.x-1);
+
1323 uv_data.at(11) = (1.f-uvs.at(3).y)*float(texture_size.y-1);
+
1324
+
1325 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1326 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1327 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1328 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1329
+
1330 std::vector<int> texture_data, coord_data;
+
1331 texture_data.resize(6,1);
+
1332 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1333 texture_data.assign(6, textureID);
+
1334 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1335 coord_data.resize(6,coordFlag);
+
1336 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
+
1337
+
1338}
+
+
1339
+
+
1340void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag ){
+
1341 std::vector<vec2> uvs;
+
1342 uvs.resize(4);
+
1343 uvs.at(0) = make_vec2(0,0);
+
1344 uvs.at(1) = make_vec2(1,0);
+
1345 uvs.at(2) = make_vec2(1,1);
+
1346 uvs.at(3) = make_vec2(0,1);
+
1347 addRectangleByVertices( vertices, color, texture_file, uvs, coordFlag );
1348
-
1349 std::vector<vec3> v = vertices; //make a copy so we can modify
+
1349}
+
1350
-
1351 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
+
1351void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const helios::RGBcolor &color, const char* texture_file, const std::vector<vec2> &uvs, CoordinateSystem coordFlag ){
1352
-
1353 //Check that coordinates are inside drawable area
-
1354 for(auto vertex : vertices){
-
1355 if(vertex.x < 0.f || vertex.x > 1.f ){
-
1356 if( message_flag ){
-
1357 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
-
1358 }
-
1359 }else if(vertex.y < 0.f || vertex.y > 1.f ){
+
1353 std::vector<vec3> v = vertices; //make a copy so we can modify
+
1354
+
1355 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
1356
+
1357 //Check that coordinates are inside drawable area
+
1358 for(auto vertex : vertices){
+
1359 if(vertex.x < 0.f || vertex.x > 1.f ){
1360 if( message_flag ){
-
1361 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
+
1361 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
1362 }
-
1363 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1363 }else if(vertex.y < 0.f || vertex.y > 1.f ){
1364 if( message_flag ){
-
1365 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1365 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
1366 }
-
1367 }
-
1368 }
-
1369
-
1370 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1371 for( uint i=0; i<vertices.size(); i++ ){
-
1372 v.at(i).x = 2.f*v.at(i).x - 1.f;
-
1373 v.at(i).y = 2.f*v.at(i).y - 1.f;
-
1374 }
-
1375
-
1376 }
-
1377
-
1378 uint textureID;
-
1379 int2 texture_size;
-
1380 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1367 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1368 if( message_flag ){
+
1369 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1370 }
+
1371 }
+
1372 }
+
1373
+
1374 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1375 for( uint i=0; i<vertices.size(); i++ ){
+
1376 v.at(i).x = 2.f*v.at(i).x - 1.f;
+
1377 v.at(i).y = 2.f*v.at(i).y - 1.f;
+
1378 }
+
1379
+
1380 }
1381
-
1382 std::vector<float> position_data, color_data, normal_data, uv_data;
-
1383 position_data.resize(18,0);
-
1384 color_data.resize(24,0);
-
1385 normal_data.resize(18,0);
-
1386 uv_data.resize(12,0);
-
1387
-
1388 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
-
1389 normal.normalize();
-
1390
-
1391 for( int i=0; i<6; i++ ){
-
1392 color_data.at(i*4) = color.r;
-
1393 color_data.at(i*4+1) = color.g;
-
1394 color_data.at(i*4+2) = color.b;
-
1395 color_data.at(i*4+3) = 1;
-
1396
-
1397 normal_data.at(i*3) = normal.x;
-
1398 normal_data.at(i*3+1) = normal.y;
-
1399 normal_data.at(i*3+2) = normal.z;
-
1400 }
-
1401
-
1402 //Lower left vertex
-
1403 position_data.at(0) = v.at(0).x;
-
1404 position_data.at(1) = v.at(0).y;
-
1405 position_data.at(2) = v.at(0).z;
-
1406 uv_data.at(0) = uvs.at(0).x*float(texture_size.x-1);
-
1407 uv_data.at(1) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
-
1408
-
1409 //Lower right vertex
-
1410 position_data.at(3) = v.at(1).x;
-
1411 position_data.at(4) = v.at(1).y;
-
1412 position_data.at(5) = v.at(1).z;
-
1413 uv_data.at(2) = uvs.at(1).x*float(texture_size.x-1);
-
1414 uv_data.at(3) = (1.f-uvs.at(1).y)*float(texture_size.y-1);
-
1415
-
1416 //Upper right vertex
-
1417 position_data.at(6) = v.at(2).x;
-
1418 position_data.at(7) = v.at(2).y;
-
1419 position_data.at(8) = v.at(2).z;
-
1420 uv_data.at(4) = uvs.at(2).x*float(texture_size.x-1);
-
1421 uv_data.at(5) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
-
1422
-
1423 //Lower left vertex
-
1424 position_data.at(9) = v.at(0).x;
-
1425 position_data.at(10) = v.at(0).y;
-
1426 position_data.at(11) = v.at(0).z;
-
1427 uv_data.at(6) = uvs.at(0).x*float(texture_size.x-1);
-
1428 uv_data.at(7) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
-
1429
-
1430 //Upper right vertex
-
1431 position_data.at(12) = v.at(2).x;
-
1432 position_data.at(13) = v.at(2).y;
-
1433 position_data.at(14) = v.at(2).z;
-
1434 uv_data.at(8) = uvs.at(2).x*float(texture_size.x-1);
-
1435 uv_data.at(9) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
-
1436
-
1437 //Upper left vertex
-
1438 position_data.at(15) = v.at(3).x;
-
1439 position_data.at(16) = v.at(3).y;
-
1440 position_data.at(17) = v.at(3).z;
-
1441 uv_data.at(10) = uvs.at(3).x*float(texture_size.x-1);
-
1442 uv_data.at(11) = (1.f-uvs.at(3).y)*float(texture_size.y-1);
-
1443
-
1444 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1445 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1446 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1447 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1448
-
1449 std::vector<int> texture_data, coord_data;
-
1450 texture_data.resize(6,2);
-
1451 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1452 texture_data.assign(6,textureID);
-
1453 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1454 coord_data.resize(6,coordFlag);
-
1455 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1456
-
1457}
-
1458
-
1459void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag ){
-
1460 addRectangleByVertices( vertices, make_RGBAcolor(color,1), glyph, coordFlag );
+
1382 uint textureID;
+
1383 int2 texture_size;
+
1384 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1385
+
1386 std::vector<float> position_data, color_data, normal_data, uv_data;
+
1387 position_data.resize(18,0);
+
1388 color_data.resize(24,0);
+
1389 normal_data.resize(18,0);
+
1390 uv_data.resize(12,0);
+
1391
+
1392 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
+
1393 normal.normalize();
+
1394
+
1395 for( int i=0; i<6; i++ ){
+
1396 color_data.at(i*4) = color.r;
+
1397 color_data.at(i*4+1) = color.g;
+
1398 color_data.at(i*4+2) = color.b;
+
1399 color_data.at(i*4+3) = 1;
+
1400
+
1401 normal_data.at(i*3) = normal.x;
+
1402 normal_data.at(i*3+1) = normal.y;
+
1403 normal_data.at(i*3+2) = normal.z;
+
1404 }
+
1405
+
1406 //Lower left vertex
+
1407 position_data.at(0) = v.at(0).x;
+
1408 position_data.at(1) = v.at(0).y;
+
1409 position_data.at(2) = v.at(0).z;
+
1410 uv_data.at(0) = uvs.at(0).x*float(texture_size.x-1);
+
1411 uv_data.at(1) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
+
1412
+
1413 //Lower right vertex
+
1414 position_data.at(3) = v.at(1).x;
+
1415 position_data.at(4) = v.at(1).y;
+
1416 position_data.at(5) = v.at(1).z;
+
1417 uv_data.at(2) = uvs.at(1).x*float(texture_size.x-1);
+
1418 uv_data.at(3) = (1.f-uvs.at(1).y)*float(texture_size.y-1);
+
1419
+
1420 //Upper right vertex
+
1421 position_data.at(6) = v.at(2).x;
+
1422 position_data.at(7) = v.at(2).y;
+
1423 position_data.at(8) = v.at(2).z;
+
1424 uv_data.at(4) = uvs.at(2).x*float(texture_size.x-1);
+
1425 uv_data.at(5) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
+
1426
+
1427 //Lower left vertex
+
1428 position_data.at(9) = v.at(0).x;
+
1429 position_data.at(10) = v.at(0).y;
+
1430 position_data.at(11) = v.at(0).z;
+
1431 uv_data.at(6) = uvs.at(0).x*float(texture_size.x-1);
+
1432 uv_data.at(7) = (1.f-uvs.at(0).y)*float(texture_size.y-1);
+
1433
+
1434 //Upper right vertex
+
1435 position_data.at(12) = v.at(2).x;
+
1436 position_data.at(13) = v.at(2).y;
+
1437 position_data.at(14) = v.at(2).z;
+
1438 uv_data.at(8) = uvs.at(2).x*float(texture_size.x-1);
+
1439 uv_data.at(9) = (1.f-uvs.at(2).y)*float(texture_size.y-1);
+
1440
+
1441 //Upper left vertex
+
1442 position_data.at(15) = v.at(3).x;
+
1443 position_data.at(16) = v.at(3).y;
+
1444 position_data.at(17) = v.at(3).z;
+
1445 uv_data.at(10) = uvs.at(3).x*float(texture_size.x-1);
+
1446 uv_data.at(11) = (1.f-uvs.at(3).y)*float(texture_size.y-1);
+
1447
+
1448 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1449 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1450 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1451 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1452
+
1453 std::vector<int> texture_data, coord_data;
+
1454 texture_data.resize(6,2);
+
1455 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1456 texture_data.assign(6,textureID);
+
1457 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1458 coord_data.resize(6,coordFlag);
+
1459 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
+
1460
1461}
+
1462
-
1463void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBAcolor &color, const Glyph* glyph, CoordinateSystem coordFlag ){
-
1464
-
1465 std::vector<vec3> v = vertices; //make a copy so we can modify
+
+
1463void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag ){
+
1464 addRectangleByVertices( vertices, make_RGBAcolor(color,1), glyph, coordFlag );
+
1465}
+
1466
-
1467 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
+
1467void Visualizer::addRectangleByVertices( const std::vector<vec3>& vertices, const RGBAcolor &color, const Glyph* glyph, CoordinateSystem coordFlag ){
1468
-
1469 //Check that coordinates are inside drawable area
-
1470 for(auto vertex : vertices){
-
1471 if(vertex.x < 0.f || vertex.x > 1.f ){
-
1472 if( message_flag ){
-
1473 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
-
1474 }
-
1475 }else if(vertex.y < 0.f || vertex.y > 1.f ){
+
1469 std::vector<vec3> v = vertices; //make a copy so we can modify
+
1470
+
1471 if( coordFlag == COORDINATES_WINDOW_NORMALIZED ){ //No vertex transformation (i.e., identity matrix)
+
1472
+
1473 //Check that coordinates are inside drawable area
+
1474 for(auto vertex : vertices){
+
1475 if(vertex.x < 0.f || vertex.x > 1.f ){
1476 if( message_flag ){
-
1477 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
+
1477 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
1478 }
-
1479 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1479 }else if(vertex.y < 0.f || vertex.y > 1.f ){
1480 if( message_flag ){
-
1481 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1481 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
1482 }
-
1483 }
-
1484 }
-
1485
-
1486 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1487 for( uint i=0; i<vertices.size(); i++ ){
-
1488 v.at(i).x = 2.f*v.at(i).x - 1.f;
-
1489 v.at(i).y = 2.f*v.at(i).y - 1.f;
-
1490 }
-
1491
-
1492 }
-
1493
-
1494 uint textureID;
-
1495 int2 texture_size = glyph->size;
-
1496 primaryShader.setTextureMask(glyph,textureID);
+
1483 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1484 if( message_flag ){
+
1485 std::cout << "WARNING (Visualizer::addRectangleByVertices): Rectangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1486 }
+
1487 }
+
1488 }
+
1489
+
1490 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1491 for( uint i=0; i<vertices.size(); i++ ){
+
1492 v.at(i).x = 2.f*v.at(i).x - 1.f;
+
1493 v.at(i).y = 2.f*v.at(i).y - 1.f;
+
1494 }
+
1495
+
1496 }
1497
-
1498 std::vector<float> position_data, color_data, normal_data, uv_data;
-
1499 position_data.resize(18,0);
-
1500 color_data.resize(24,0);
-
1501 normal_data.resize(18,0);
-
1502 uv_data.resize(12,0);
-
1503
-
1504 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
-
1505 normal.normalize();
-
1506
-
1507 for( int i=0; i<6; i++ ){
-
1508 color_data.at(i*4) = color.r;
-
1509 color_data.at(i*4+1) = color.g;
-
1510 color_data.at(i*4+2) = color.b;
-
1511 color_data.at(i*4+3) = color.a;
-
1512
-
1513 normal_data.at(i*3) = normal.x;
-
1514 normal_data.at(i*3+1) = normal.y;
-
1515 normal_data.at(i*3+2) = normal.z;
-
1516 }
-
1517
-
1518 //Lower left vertex
-
1519 position_data.at(0) = v.at(0).x;
-
1520 position_data.at(1) = v.at(0).y;
-
1521 position_data.at(2) = v.at(0).z;
-
1522 uv_data.at(0) = 0;
-
1523 uv_data.at(1) = texture_size.y;
-
1524
-
1525 //Lower right vertex
-
1526 position_data.at(3) = v.at(1).x;
-
1527 position_data.at(4) = v.at(1).y;
-
1528 position_data.at(5) = v.at(1).z;
-
1529 uv_data.at(2) = texture_size.x;
-
1530 uv_data.at(3) = texture_size.y;
-
1531
-
1532 //Upper right vertex
-
1533 position_data.at(6) = v.at(2).x;
-
1534 position_data.at(7) = v.at(2).y;
-
1535 position_data.at(8) = v.at(2).z;
-
1536 uv_data.at(4) = texture_size.x;
-
1537 uv_data.at(5) = 0;
-
1538
-
1539 //Lower left vertex
-
1540 position_data.at(9) = v.at(0).x;
-
1541 position_data.at(10) = v.at(0).y;
-
1542 position_data.at(11) = v.at(0).z;
-
1543 uv_data.at(6) = 0;
-
1544 uv_data.at(7) = texture_size.y;
-
1545
-
1546 //Upper right vertex
-
1547 position_data.at(12) = v.at(2).x;
-
1548 position_data.at(13) = v.at(2).y;
-
1549 position_data.at(14) = v.at(2).z;
-
1550 uv_data.at(8) = texture_size.x;
-
1551 uv_data.at(9) = 0;
-
1552
-
1553 //Upper left vertex
-
1554 position_data.at(15) = v.at(3).x;
-
1555 position_data.at(16) = v.at(3).y;
-
1556 position_data.at(17) = v.at(3).z;
-
1557 uv_data.at(10) = 0;
-
1558 uv_data.at(11) = 0;
-
1559
-
1560 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1561 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1562 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1563 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1564
-
1565 std::vector<int> texture_data, coord_data;
-
1566 texture_data.resize(6,3);
-
1567 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1568 texture_data.assign(6,textureID);
-
1569 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1570 coord_data.resize(6,coordFlag);
-
1571 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1572
-
1573}
-
1574
-
1575void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const RGBcolor &color, CoordinateSystem coordFlag ){
-
1576 addTriangle( vertex0, vertex1,vertex2, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag);
+
1498 uint textureID;
+
1499 int2 texture_size = glyph->size;
+
1500 primaryShader.setTextureMask(glyph,textureID);
+
1501
+
1502 std::vector<float> position_data, color_data, normal_data, uv_data;
+
1503 position_data.resize(18,0);
+
1504 color_data.resize(24,0);
+
1505 normal_data.resize(18,0);
+
1506 uv_data.resize(12,0);
+
1507
+
1508 vec3 normal = cross( v.at(1)-v.at(0), v.at(2)-v.at(1) );
+
1509 normal.normalize();
+
1510
+
1511 for( int i=0; i<6; i++ ){
+
1512 color_data.at(i*4) = color.r;
+
1513 color_data.at(i*4+1) = color.g;
+
1514 color_data.at(i*4+2) = color.b;
+
1515 color_data.at(i*4+3) = color.a;
+
1516
+
1517 normal_data.at(i*3) = normal.x;
+
1518 normal_data.at(i*3+1) = normal.y;
+
1519 normal_data.at(i*3+2) = normal.z;
+
1520 }
+
1521
+
1522 //Lower left vertex
+
1523 position_data.at(0) = v.at(0).x;
+
1524 position_data.at(1) = v.at(0).y;
+
1525 position_data.at(2) = v.at(0).z;
+
1526 uv_data.at(0) = 0;
+
1527 uv_data.at(1) = texture_size.y;
+
1528
+
1529 //Lower right vertex
+
1530 position_data.at(3) = v.at(1).x;
+
1531 position_data.at(4) = v.at(1).y;
+
1532 position_data.at(5) = v.at(1).z;
+
1533 uv_data.at(2) = texture_size.x;
+
1534 uv_data.at(3) = texture_size.y;
+
1535
+
1536 //Upper right vertex
+
1537 position_data.at(6) = v.at(2).x;
+
1538 position_data.at(7) = v.at(2).y;
+
1539 position_data.at(8) = v.at(2).z;
+
1540 uv_data.at(4) = texture_size.x;
+
1541 uv_data.at(5) = 0;
+
1542
+
1543 //Lower left vertex
+
1544 position_data.at(9) = v.at(0).x;
+
1545 position_data.at(10) = v.at(0).y;
+
1546 position_data.at(11) = v.at(0).z;
+
1547 uv_data.at(6) = 0;
+
1548 uv_data.at(7) = texture_size.y;
+
1549
+
1550 //Upper right vertex
+
1551 position_data.at(12) = v.at(2).x;
+
1552 position_data.at(13) = v.at(2).y;
+
1553 position_data.at(14) = v.at(2).z;
+
1554 uv_data.at(8) = texture_size.x;
+
1555 uv_data.at(9) = 0;
+
1556
+
1557 //Upper left vertex
+
1558 position_data.at(15) = v.at(3).x;
+
1559 position_data.at(16) = v.at(3).y;
+
1560 position_data.at(17) = v.at(3).z;
+
1561 uv_data.at(10) = 0;
+
1562 uv_data.at(11) = 0;
+
1563
+
1564 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1565 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1566 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1567 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1568
+
1569 std::vector<int> texture_data, coord_data;
+
1570 texture_data.resize(6,3);
+
1571 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1572 texture_data.assign(6,textureID);
+
1573 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1574 coord_data.resize(6,coordFlag);
+
1575 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
+
1576
1577}
+
1578
-
1579void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const RGBAcolor &color, CoordinateSystem coordFlag ){
-
1580
-
1581 std::vector<vec3> v{vertex0, vertex1, vertex2};
+
+
1579void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const RGBcolor &color, CoordinateSystem coordFlag ){
+
1580 addTriangle( vertex0, vertex1,vertex2, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag);
+
1581}
+
1582
-
1583 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
+
1583void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const RGBAcolor &color, CoordinateSystem coordFlag ){
1584
-
1585 //Check that coordinates are inside drawable area
-
1586 for(auto & vertex : v){
-
1587 if(vertex.x < 0.f || vertex.x > 1.f ){
-
1588 if( message_flag ){
-
1589 std::cout << "WARNING (Visualizer::addTriangle): Triangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
-
1590 }
-
1591 }else if(vertex.y < 0.f || vertex.y > 1.f ){
+
1585 std::vector<vec3> v{vertex0, vertex1, vertex2};
+
1586
+
1587 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
1588
+
1589 //Check that coordinates are inside drawable area
+
1590 for(auto & vertex : v){
+
1591 if(vertex.x < 0.f || vertex.x > 1.f ){
1592 if( message_flag ){
-
1593 std::cout << "WARNING (Visualizer::addTriangle): Triangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
+
1593 std::cout << "WARNING (Visualizer::addTriangle): Triangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
1594 }
-
1595 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1595 }else if(vertex.y < 0.f || vertex.y > 1.f ){
1596 if( message_flag ){
-
1597 std::cout << "WARNING (Visualizer::addTriangle): Triangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1597 std::cout << "WARNING (Visualizer::addTriangle): Triangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
1598 }
-
1599 }
-
1600 }
-
1601
-
1602 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1603 for(auto & vertex : v){
-
1604 vertex.x = 2.f * vertex.x - 1.f;
-
1605 vertex.y = 2.f * vertex.y - 1.f;
-
1606 }
-
1607
-
1608 }
-
1609
-
1610 std::vector<GLfloat> position_data(9), color_data(12), normal_data(9), uv_data(6);
+
1599 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1600 if( message_flag ){
+
1601 std::cout << "WARNING (Visualizer::addTriangle): Triangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1602 }
+
1603 }
+
1604 }
+
1605
+
1606 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1607 for(auto & vertex : v){
+
1608 vertex.x = 2.f * vertex.x - 1.f;
+
1609 vertex.y = 2.f * vertex.y - 1.f;
+
1610 }
1611
-
1612 vec3 normal = cross( vertex1-vertex0, vertex2-vertex0 );
-
1613 normal.normalize();
-
1614
-
1615 //Vertex 0
-
1616 position_data[0] = v.at(0).x;
-
1617 position_data[1] = v.at(0).y;
-
1618 position_data[2] = v.at(0).z;
-
1619 color_data[0] = color.r;
-
1620 color_data[1] = color.g;
-
1621 color_data[2] = color.b;
-
1622 color_data[3] = color.a;
-
1623 normal_data[0] = normal.x;
-
1624 normal_data[1] = normal.y;
-
1625 normal_data[2] = normal.z;
-
1626
-
1627 //Vertex 1
-
1628 position_data[3] = v.at(1).x;
-
1629 position_data[4] = v.at(1).y;
-
1630 position_data[5] = v.at(1).z;
-
1631 color_data[4] = color.r;
-
1632 color_data[5] = color.g;
-
1633 color_data[6] = color.b;
-
1634 color_data[7] = color.a;
-
1635 normal_data[3] = normal.x;
-
1636 normal_data[4] = normal.y;
-
1637 normal_data[5] = normal.z;
-
1638
-
1639 //Vertex 2
-
1640 position_data[6] = v.at(2).x;
-
1641 position_data[7] = v.at(2).y;
-
1642 position_data[8] = v.at(2).z;
-
1643 color_data[8] = color.r;
-
1644 color_data[9] = color.g;
-
1645 color_data[10] = color.b;
-
1646 color_data[11] = color.a;
-
1647 normal_data[6] = normal.x;
-
1648 normal_data[7] = normal.y;
-
1649 normal_data[8] = normal.z;
-
1650
-
1651 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1652 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1653 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1654 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1655
-
1656 std::vector<int> texture_data, coord_data;
-
1657 texture_data.resize(3,0);
-
1658 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1659 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1660
-
1661 coord_data.resize(3,coordFlag);
-
1662 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1663
-
1664}
-
1665
-
1666void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, CoordinateSystem coordFlag){
+
1612 }
+
1613
+
1614 std::vector<GLfloat> position_data(9), color_data(12), normal_data(9), uv_data(6);
+
1615
+
1616 vec3 normal = cross( vertex1-vertex0, vertex2-vertex0 );
+
1617 normal.normalize();
+
1618
+
1619 //Vertex 0
+
1620 position_data[0] = v.at(0).x;
+
1621 position_data[1] = v.at(0).y;
+
1622 position_data[2] = v.at(0).z;
+
1623 color_data[0] = color.r;
+
1624 color_data[1] = color.g;
+
1625 color_data[2] = color.b;
+
1626 color_data[3] = color.a;
+
1627 normal_data[0] = normal.x;
+
1628 normal_data[1] = normal.y;
+
1629 normal_data[2] = normal.z;
+
1630
+
1631 //Vertex 1
+
1632 position_data[3] = v.at(1).x;
+
1633 position_data[4] = v.at(1).y;
+
1634 position_data[5] = v.at(1).z;
+
1635 color_data[4] = color.r;
+
1636 color_data[5] = color.g;
+
1637 color_data[6] = color.b;
+
1638 color_data[7] = color.a;
+
1639 normal_data[3] = normal.x;
+
1640 normal_data[4] = normal.y;
+
1641 normal_data[5] = normal.z;
+
1642
+
1643 //Vertex 2
+
1644 position_data[6] = v.at(2).x;
+
1645 position_data[7] = v.at(2).y;
+
1646 position_data[8] = v.at(2).z;
+
1647 color_data[8] = color.r;
+
1648 color_data[9] = color.g;
+
1649 color_data[10] = color.b;
+
1650 color_data[11] = color.a;
+
1651 normal_data[6] = normal.x;
+
1652 normal_data[7] = normal.y;
+
1653 normal_data[8] = normal.z;
+
1654
+
1655 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1656 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1657 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1658 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1659
+
1660 std::vector<int> texture_data, coord_data;
+
1661 texture_data.resize(3,0);
+
1662 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1663 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1664
+
1665 coord_data.resize(3,coordFlag);
+
1666 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
1667
-
1668 std::vector<vec3> v{vertex0, vertex1, vertex2};
+
1668}
+
1669
-
1670 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
+
1670void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, CoordinateSystem coordFlag){
1671
-
1672 //Check that coordinates are inside drawable area
-
1673 for(auto & vertex : v){
-
1674 if(vertex.x < 0.f || vertex.x > 1.f ){
-
1675 if( message_flag ){
-
1676 std::cout << "WARNING (Visualizer::addTriangle): Triangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
-
1677 }
-
1678 }else if(vertex.y < 0.f || vertex.y > 1.f ){
+
1672 std::vector<vec3> v{vertex0, vertex1, vertex2};
+
1673
+
1674 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
1675
+
1676 //Check that coordinates are inside drawable area
+
1677 for(auto & vertex : v){
+
1678 if(vertex.x < 0.f || vertex.x > 1.f ){
1679 if( message_flag ){
-
1680 std::cout << "WARNING (Visualizer::addTriangle): Triangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
+
1680 std::cout << "WARNING (Visualizer::addTriangle): Triangle `x' position ( " << vertex.x << " ) is outside of drawable area." << std::endl;
1681 }
-
1682 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1682 }else if(vertex.y < 0.f || vertex.y > 1.f ){
1683 if( message_flag ){
-
1684 std::cout << "WARNING (Visualizer::addTriangle): Triangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1684 std::cout << "WARNING (Visualizer::addTriangle): Triangle `y' position ( " << vertex.y << " ) is outside of drawable area." << std::endl;
1685 }
-
1686 }
-
1687 }
-
1688
-
1689 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1690 for(auto & vertex : v){
-
1691 vertex.x = 2.f * vertex.x - 1.f;
-
1692 vertex.y = 2.f * vertex.y - 1.f;
-
1693 }
-
1694
-
1695 }
-
1696
-
1697 uint textureID;
-
1698 int2 texture_size;
-
1699 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1686 }else if(vertex.z < -1.f || vertex.z > 1.f ){
+
1687 if( message_flag ){
+
1688 std::cout << "WARNING (Visualizer::addTriangle): Triangle `z' position ( " << vertex.z << " ) is outside of drawable area." << std::endl;
+
1689 }
+
1690 }
+
1691 }
+
1692
+
1693 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1694 for(auto & vertex : v){
+
1695 vertex.x = 2.f * vertex.x - 1.f;
+
1696 vertex.y = 2.f * vertex.y - 1.f;
+
1697 }
+
1698
+
1699 }
1700
-
1701 std::vector<GLfloat> position_data(9), color_data(12), normal_data(9), uv_data(6);
-
1702
-
1703 vec3 normal = cross( vertex1-vertex0, vertex2-vertex0 );
-
1704 normal.normalize();
-
1705
-
1706 //Vertex 0
-
1707 position_data[0] = v.at(0).x;
-
1708 position_data[1] = v.at(0).y;
-
1709 position_data[2] = v.at(0).z;
-
1710 uv_data[0] = uv0.x*texture_size.x;
-
1711 uv_data[1] = (1.f-uv0.y)*texture_size.y;
-
1712 normal_data[0] = normal.x;
-
1713 normal_data[1] = normal.y;
-
1714 normal_data[2] = normal.z;
-
1715
-
1716 //Vertex 1
-
1717 position_data[3] = v.at(1).x;
-
1718 position_data[4] = v.at(1).y;
-
1719 position_data[5] = v.at(1).z;
-
1720 uv_data[2] = uv1.x*texture_size.x;
-
1721 uv_data[3] = (1.f-uv1.y)*texture_size.y;
-
1722 normal_data[3] = normal.x;
-
1723 normal_data[4] = normal.y;
-
1724 normal_data[5] = normal.z;
-
1725
-
1726 //Vertex 2
-
1727 position_data[6] = v.at(2).x;
-
1728 position_data[7] = v.at(2).y;
-
1729 position_data[8] = v.at(2).z;
-
1730 uv_data[4] = uv2.x*texture_size.x;
-
1731 uv_data[5] = (1.f-uv2.y)*texture_size.y;
-
1732 normal_data[6] = normal.x;
-
1733 normal_data[7] = normal.y;
-
1734 normal_data[8] = normal.z;
-
1735
-
1736 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1737 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1738 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1739 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1740
-
1741 std::vector<int> texture_data, coord_data;
-
1742 texture_data.assign(3,1);
-
1743 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1744 texture_data.assign(3,textureID);
-
1745 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1746
-
1747 coord_data.assign(3,coordFlag);
-
1748 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1749
-
1750}
-
1751
-
1752void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, const RGBAcolor &color, CoordinateSystem coordFlag){
+
1701 uint textureID;
+
1702 int2 texture_size;
+
1703 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1704
+
1705 std::vector<GLfloat> position_data(9), color_data(12), normal_data(9), uv_data(6);
+
1706
+
1707 vec3 normal = cross( vertex1-vertex0, vertex2-vertex0 );
+
1708 normal.normalize();
+
1709
+
1710 //Vertex 0
+
1711 position_data[0] = v.at(0).x;
+
1712 position_data[1] = v.at(0).y;
+
1713 position_data[2] = v.at(0).z;
+
1714 uv_data[0] = uv0.x*texture_size.x;
+
1715 uv_data[1] = (1.f-uv0.y)*texture_size.y;
+
1716 normal_data[0] = normal.x;
+
1717 normal_data[1] = normal.y;
+
1718 normal_data[2] = normal.z;
+
1719
+
1720 //Vertex 1
+
1721 position_data[3] = v.at(1).x;
+
1722 position_data[4] = v.at(1).y;
+
1723 position_data[5] = v.at(1).z;
+
1724 uv_data[2] = uv1.x*texture_size.x;
+
1725 uv_data[3] = (1.f-uv1.y)*texture_size.y;
+
1726 normal_data[3] = normal.x;
+
1727 normal_data[4] = normal.y;
+
1728 normal_data[5] = normal.z;
+
1729
+
1730 //Vertex 2
+
1731 position_data[6] = v.at(2).x;
+
1732 position_data[7] = v.at(2).y;
+
1733 position_data[8] = v.at(2).z;
+
1734 uv_data[4] = uv2.x*texture_size.x;
+
1735 uv_data[5] = (1.f-uv2.y)*texture_size.y;
+
1736 normal_data[6] = normal.x;
+
1737 normal_data[7] = normal.y;
+
1738 normal_data[8] = normal.z;
+
1739
+
1740 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1741 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1742 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1743 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1744
+
1745 std::vector<int> texture_data, coord_data;
+
1746 texture_data.assign(3,1);
+
1747 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1748 texture_data.assign(3,textureID);
+
1749 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1750
+
1751 coord_data.assign(3,coordFlag);
+
1752 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
1753
-
1754 std::vector<vec3> v{vertex0, vertex1, vertex2};
+
1754}
+
1755
-
1756 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
+
1756void Visualizer::addTriangle( const vec3 &vertex0, const vec3 &vertex1, const vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, const RGBAcolor &color, CoordinateSystem coordFlag){
1757
-
1758 //Check that coordinates are inside drawable area
-
1759 for( uint i=0; i<v.size(); i++ ){
-
1760 if( v.at(i).x<0.f || v.at(i).x>1.f ){
-
1761 if( message_flag ){
-
1762 std::cout << "WARNING (Visualizer::addTriangle): Triangle `x' position ( " << v.at(i).x << " ) is outside of drawable area." << std::endl;
-
1763 }
-
1764 }else if( v.at(i).y<0.f || v.at(i).y>1.f ){
+
1758 std::vector<vec3> v{vertex0, vertex1, vertex2};
+
1759
+
1760 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
1761
+
1762 //Check that coordinates are inside drawable area
+
1763 for( uint i=0; i<v.size(); i++ ){
+
1764 if( v.at(i).x<0.f || v.at(i).x>1.f ){
1765 if( message_flag ){
-
1766 std::cout << "WARNING (Visualizer::addTriangle): Triangle `y' position ( " << v.at(i).y << " ) is outside of drawable area." << std::endl;
+
1766 std::cout << "WARNING (Visualizer::addTriangle): Triangle `x' position ( " << v.at(i).x << " ) is outside of drawable area." << std::endl;
1767 }
-
1768 }else if( v.at(i).z<-1.f || v.at(i).z>1.f ){
+
1768 }else if( v.at(i).y<0.f || v.at(i).y>1.f ){
1769 if( message_flag ){
-
1770 std::cout << "WARNING (Visualizer::addTriangle): Triangle `z' position ( " << v.at(i).z << " ) is outside of drawable area." << std::endl;
+
1770 std::cout << "WARNING (Visualizer::addTriangle): Triangle `y' position ( " << v.at(i).y << " ) is outside of drawable area." << std::endl;
1771 }
-
1772 }
-
1773 }
-
1774
-
1775 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1776 for( uint i=0; i<v.size(); i++ ){
-
1777 v.at(i).x = 2.f*v.at(i).x - 1.f;
-
1778 v.at(i).y = 2.f*v.at(i).y - 1.f;
-
1779 }
-
1780
-
1781 }
-
1782
-
1783 uint textureID;
-
1784 int2 texture_size;
-
1785 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1772 }else if( v.at(i).z<-1.f || v.at(i).z>1.f ){
+
1773 if( message_flag ){
+
1774 std::cout << "WARNING (Visualizer::addTriangle): Triangle `z' position ( " << v.at(i).z << " ) is outside of drawable area." << std::endl;
+
1775 }
+
1776 }
+
1777 }
+
1778
+
1779 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1780 for( uint i=0; i<v.size(); i++ ){
+
1781 v.at(i).x = 2.f*v.at(i).x - 1.f;
+
1782 v.at(i).y = 2.f*v.at(i).y - 1.f;
+
1783 }
+
1784
+
1785 }
1786
-
1787 std::vector<GLfloat> position_data(9), color_data(12), normal_data(9), uv_data(6);
-
1788
-
1789 vec3 normal = cross( vertex1-vertex0, vertex2-vertex0 );
-
1790 normal.normalize();
-
1791
-
1792 //Vertex 0
-
1793 position_data[0] = v.at(0).x;
-
1794 position_data[1] = v.at(0).y;
-
1795 position_data[2] = v.at(0).z;
-
1796 color_data[0] = color.r;
-
1797 color_data[1] = color.g;
-
1798 color_data[2] = color.b;
-
1799 color_data[3] = color.a;
-
1800 uv_data[0] = uv0.x*texture_size.x;
-
1801 uv_data[1] = (1.f-uv0.y)*texture_size.y;
-
1802 normal_data[0] = normal.x;
-
1803 normal_data[1] = normal.y;
-
1804 normal_data[2] = normal.z;
-
1805
-
1806 //Vertex 1
-
1807 position_data[3] = v.at(1).x;
-
1808 position_data[4] = v.at(1).y;
-
1809 position_data[5] = v.at(1).z;
-
1810 color_data[4] = color.r;
-
1811 color_data[5] = color.g;
-
1812 color_data[6] = color.b;
-
1813 color_data[7] = color.a;
-
1814 uv_data[2] = uv1.x*texture_size.x;
-
1815 uv_data[3] = (1.f-uv1.y)*texture_size.y;
-
1816 normal_data[3] = normal.x;
-
1817 normal_data[4] = normal.y;
-
1818 normal_data[5] = normal.z;
-
1819
-
1820 //Vertex 2
-
1821 position_data[6] = v.at(2).x;
-
1822 position_data[7] = v.at(2).y;
-
1823 position_data[8] = v.at(2).z;
-
1824 color_data[8] = color.r;
-
1825 color_data[9] = color.g;
-
1826 color_data[10] = color.b;
-
1827 color_data[11] = color.a;
-
1828 uv_data[4] = uv2.x*texture_size.x;
-
1829 uv_data[5] = (1.f-uv2.y)*texture_size.y;
-
1830 normal_data[6] = normal.x;
-
1831 normal_data[7] = normal.y;
-
1832 normal_data[8] = normal.z;
-
1833
-
1834 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1835 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1836 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1837 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1838
-
1839 std::vector<int> texture_data, coord_data;
-
1840 texture_data.resize(3,2);
-
1841 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1842 texture_data.resize(0);
-
1843 texture_data.resize(3,textureID);
-
1844 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1845
-
1846 coord_data.resize(3,coordFlag);
-
1847 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1848
-
1849}
-
1850
-
1851void Visualizer::addVoxelByCenter( const vec3 &center, const vec3 &size, const SphericalCoord &rotation, const RGBcolor &color, CoordinateSystem coordFlag ){
-
1852 addVoxelByCenter( center, size, rotation, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1787 uint textureID;
+
1788 int2 texture_size;
+
1789 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1790
+
1791 std::vector<GLfloat> position_data(9), color_data(12), normal_data(9), uv_data(6);
+
1792
+
1793 vec3 normal = cross( vertex1-vertex0, vertex2-vertex0 );
+
1794 normal.normalize();
+
1795
+
1796 //Vertex 0
+
1797 position_data[0] = v.at(0).x;
+
1798 position_data[1] = v.at(0).y;
+
1799 position_data[2] = v.at(0).z;
+
1800 color_data[0] = color.r;
+
1801 color_data[1] = color.g;
+
1802 color_data[2] = color.b;
+
1803 color_data[3] = color.a;
+
1804 uv_data[0] = uv0.x*texture_size.x;
+
1805 uv_data[1] = (1.f-uv0.y)*texture_size.y;
+
1806 normal_data[0] = normal.x;
+
1807 normal_data[1] = normal.y;
+
1808 normal_data[2] = normal.z;
+
1809
+
1810 //Vertex 1
+
1811 position_data[3] = v.at(1).x;
+
1812 position_data[4] = v.at(1).y;
+
1813 position_data[5] = v.at(1).z;
+
1814 color_data[4] = color.r;
+
1815 color_data[5] = color.g;
+
1816 color_data[6] = color.b;
+
1817 color_data[7] = color.a;
+
1818 uv_data[2] = uv1.x*texture_size.x;
+
1819 uv_data[3] = (1.f-uv1.y)*texture_size.y;
+
1820 normal_data[3] = normal.x;
+
1821 normal_data[4] = normal.y;
+
1822 normal_data[5] = normal.z;
+
1823
+
1824 //Vertex 2
+
1825 position_data[6] = v.at(2).x;
+
1826 position_data[7] = v.at(2).y;
+
1827 position_data[8] = v.at(2).z;
+
1828 color_data[8] = color.r;
+
1829 color_data[9] = color.g;
+
1830 color_data[10] = color.b;
+
1831 color_data[11] = color.a;
+
1832 uv_data[4] = uv2.x*texture_size.x;
+
1833 uv_data[5] = (1.f-uv2.y)*texture_size.y;
+
1834 normal_data[6] = normal.x;
+
1835 normal_data[7] = normal.y;
+
1836 normal_data[8] = normal.z;
+
1837
+
1838 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1839 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1840 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1841 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1842
+
1843 std::vector<int> texture_data, coord_data;
+
1844 texture_data.resize(3,2);
+
1845 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1846 texture_data.resize(0);
+
1847 texture_data.resize(3,textureID);
+
1848 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1849
+
1850 coord_data.resize(3,coordFlag);
+
1851 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
+
1852
1853}
+
1854
-
1855void Visualizer::addVoxelByCenter( const vec3 &center, const vec3 &size, const SphericalCoord &rotation, const RGBAcolor &color, CoordinateSystem coordFlag ){
-
1856
-
1857 float eps = 1e-4; //Avoid z-fighting
+
+
1855void Visualizer::addVoxelByCenter( const vec3 &center, const vec3 &size, const SphericalCoord &rotation, const RGBcolor &color, CoordinateSystem coordFlag ){
+
1856 addVoxelByCenter( center, size, rotation, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1857}
+
1858
-
1859 float az = rotation.azimuth;
+
+
1859void Visualizer::addVoxelByCenter( const vec3 &center, const vec3 &size, const SphericalCoord &rotation, const RGBAcolor &color, CoordinateSystem coordFlag ){
1860
-
1861 vec3 c0 = center + rotatePoint(make_vec3(0,-0.5f*size.y, 0.f),0,az) + eps;
-
1862 addRectangleByCenter( c0, make_vec2(size.x,size.z), make_SphericalCoord(-0.5*M_PI,az), color, coordFlag );
-
1863
-
1864 vec3 c1 = center + rotatePoint(make_vec3(0, 0.5f*size.y, 0.f),0,az) + eps;
-
1865 addRectangleByCenter( c1, make_vec2(size.x,size.z), make_SphericalCoord(0.5*M_PI,az), color, coordFlag );
-
1866
-
1867 vec3 c2 = center + rotatePoint(make_vec3(0.5f*size.x, 0.f, 0.f),0,az) + eps;
-
1868 addRectangleByCenter( c2, make_vec2(size.y,size.z), make_SphericalCoord(0.5*M_PI,0.5*M_PI+az), color, coordFlag );
-
1869
-
1870 vec3 c3 = center + rotatePoint(make_vec3(-0.5f*size.x, 0.f, 0.f),0,az) + eps;
-
1871 addRectangleByCenter( c3, make_vec2(size.y,size.z), make_SphericalCoord(0.5*M_PI,0.5*M_PI+az), color, coordFlag );
-
1872
-
1873 vec3 c4 = center + make_vec3(0.f, 0.f, -0.5f*size.z) + eps;
-
1874 addRectangleByCenter( c4, make_vec2(size.x,size.y), make_SphericalCoord(M_PI,az), color, coordFlag );
-
1875
-
1876 vec3 c5 = center + make_vec3(0.f, 0.f, 0.5f*size.z) + eps;
-
1877 addRectangleByCenter( c5, make_vec2(size.x,size.y), make_SphericalCoord(0,az), color, coordFlag );
-
1878
-
1879}
-
1880
-
1881void Visualizer::addDiskByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, uint Ndivisions, const RGBcolor &color, CoordinateSystem coordFlag ){
-
1882 addDiskByCenter( center, size, rotation, Ndivisions, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1861 float eps = 1e-4; //Avoid z-fighting
+
1862
+
1863 float az = rotation.azimuth;
+
1864
+
1865 vec3 c0 = center + rotatePoint(make_vec3(0,-0.5f*size.y, 0.f),0,az) + eps;
+
1866 addRectangleByCenter( c0, make_vec2(size.x,size.z), make_SphericalCoord(-0.5*M_PI,az), color, coordFlag );
+
1867
+
1868 vec3 c1 = center + rotatePoint(make_vec3(0, 0.5f*size.y, 0.f),0,az) + eps;
+
1869 addRectangleByCenter( c1, make_vec2(size.x,size.z), make_SphericalCoord(0.5*M_PI,az), color, coordFlag );
+
1870
+
1871 vec3 c2 = center + rotatePoint(make_vec3(0.5f*size.x, 0.f, 0.f),0,az) + eps;
+
1872 addRectangleByCenter( c2, make_vec2(size.y,size.z), make_SphericalCoord(0.5*M_PI,0.5*M_PI+az), color, coordFlag );
+
1873
+
1874 vec3 c3 = center + rotatePoint(make_vec3(-0.5f*size.x, 0.f, 0.f),0,az) + eps;
+
1875 addRectangleByCenter( c3, make_vec2(size.y,size.z), make_SphericalCoord(0.5*M_PI,0.5*M_PI+az), color, coordFlag );
+
1876
+
1877 vec3 c4 = center + make_vec3(0.f, 0.f, -0.5f*size.z) + eps;
+
1878 addRectangleByCenter( c4, make_vec2(size.x,size.y), make_SphericalCoord(M_PI,az), color, coordFlag );
+
1879
+
1880 vec3 c5 = center + make_vec3(0.f, 0.f, 0.5f*size.z) + eps;
+
1881 addRectangleByCenter( c5, make_vec2(size.x,size.y), make_SphericalCoord(0,az), color, coordFlag );
+
1882
1883}
+
1884
-
1885void Visualizer::addDiskByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, uint Ndivisions, const RGBAcolor &color, CoordinateSystem coordFlag ){
-
1886
-
1887 vec3 disk_center = center;
-
1888 vec2 disk_size = size;
-
1889
-
1890 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
-
1891
-
1892 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our disk coordinates are from 0 to 1 ---- need to convert
-
1893 disk_center.x = 2.f*disk_center.x - 1.f;
-
1894 disk_center.y = 2.f*disk_center.y - 1.f;
-
1895 disk_size.x = 2.f*disk_size.x;
-
1896 disk_size.y = 2.f*disk_size.y;
-
1897
-
1898 }
-
1899
-
1900 std::vector<float> position_data, color_data, normal_data, uv_data;
+
+
1885void Visualizer::addDiskByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, uint Ndivisions, const RGBcolor &color, CoordinateSystem coordFlag ){
+
1886 addDiskByCenter( center, size, rotation, Ndivisions, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
1887}
+
+
1888
+
+
1889void Visualizer::addDiskByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, uint Ndivisions, const RGBAcolor &color, CoordinateSystem coordFlag ){
+
1890
+
1891 vec3 disk_center = center;
+
1892 vec2 disk_size = size;
+
1893
+
1894 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
1895
+
1896 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our disk coordinates are from 0 to 1 ---- need to convert
+
1897 disk_center.x = 2.f*disk_center.x - 1.f;
+
1898 disk_center.y = 2.f*disk_center.y - 1.f;
+
1899 disk_size.x = 2.f*disk_size.x;
+
1900 disk_size.y = 2.f*disk_size.y;
1901
-
1902 vec3 normal = rotatePoint(make_vec3(0,0,1),rotation);
+
1902 }
1903
-
1904 for( int i=0; i<Ndivisions-1; i++ ){
+
1904 std::vector<float> position_data, color_data, normal_data, uv_data;
1905
-
1906 //Center
-
1907 position_data.push_back( disk_center.x );
-
1908 position_data.push_back( disk_center.y );
-
1909 position_data.push_back( disk_center.z );
-
1910 color_data.push_back( color.r );
-
1911 color_data.push_back( color.g );
-
1912 color_data.push_back( color.b );
-
1913 color_data.push_back( color.a );
-
1914 normal_data.push_back( normal.x );
-
1915 normal_data.push_back( normal.y);
-
1916 normal_data.push_back( normal.z);
-
1917
-
1918 float theta1 = 2.f*M_PI*float(i)/float(Ndivisions-1);
-
1919 vec3 v1 = make_vec3( disk_size.x*cos(theta1), disk_size.y*sin(theta1), 0 );
-
1920 v1 = rotatePoint(v1,rotation);
+
1906 vec3 normal = rotatePoint(make_vec3(0,0,1),rotation);
+
1907
+
1908 for( int i=0; i<Ndivisions-1; i++ ){
+
1909
+
1910 //Center
+
1911 position_data.push_back( disk_center.x );
+
1912 position_data.push_back( disk_center.y );
+
1913 position_data.push_back( disk_center.z );
+
1914 color_data.push_back( color.r );
+
1915 color_data.push_back( color.g );
+
1916 color_data.push_back( color.b );
+
1917 color_data.push_back( color.a );
+
1918 normal_data.push_back( normal.x );
+
1919 normal_data.push_back( normal.y);
+
1920 normal_data.push_back( normal.z);
1921
-
1922 position_data.push_back( disk_center.x + v1.x );
-
1923 position_data.push_back( disk_center.y + v1.y );
-
1924 position_data.push_back( disk_center.z + v1.z );
-
1925 color_data.push_back( color.r );
-
1926 color_data.push_back( color.g );
-
1927 color_data.push_back( color.b );
-
1928 color_data.push_back( color.a );
-
1929 normal_data.push_back( normal.x );
-
1930 normal_data.push_back( normal.y );
-
1931 normal_data.push_back( normal.z );
-
1932
-
1933 float theta2 = 2.f*M_PI*float(i)/float(Ndivisions-1);
-
1934
-
1935 vec3 v2 = make_vec3( disk_size.x*cos(theta2), disk_size.y*sin(theta2), 0 );
-
1936 v2 = rotatePoint(v2,rotation);
-
1937 position_data.push_back( disk_center.x + v2.x );
-
1938 position_data.push_back( disk_center.y + v2.y );
-
1939 position_data.push_back( disk_center.z + v2.z );
-
1940 color_data.push_back( color.r );
-
1941 color_data.push_back( color.g );
-
1942 color_data.push_back( color.b );
-
1943 color_data.push_back( color.a );
-
1944 normal_data.push_back( normal.x );
-
1945 normal_data.push_back( normal.y );
-
1946 normal_data.push_back( normal.z );
-
1947
-
1948 }
-
1949
-
1950 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
1951 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
1952 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
1953 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
1954
-
1955 std::vector<int> texture_data, coord_data;
-
1956 texture_data.resize(position_data.size()/3,0);
-
1957 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1958 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
1959
-
1960 coord_data.assign(position_data.size()/3,coordFlag);
-
1961 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
1962
-
1963}
-
1964
-
1965void Visualizer::addDiskByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, uint Ndivisions, const char* texture_file, CoordinateSystem coordFlag ){
+
1922 float theta1 = 2.f*M_PI*float(i)/float(Ndivisions-1);
+
1923 vec3 v1 = make_vec3( disk_size.x*cos(theta1), disk_size.y*sin(theta1), 0 );
+
1924 v1 = rotatePoint(v1,rotation);
+
1925
+
1926 position_data.push_back( disk_center.x + v1.x );
+
1927 position_data.push_back( disk_center.y + v1.y );
+
1928 position_data.push_back( disk_center.z + v1.z );
+
1929 color_data.push_back( color.r );
+
1930 color_data.push_back( color.g );
+
1931 color_data.push_back( color.b );
+
1932 color_data.push_back( color.a );
+
1933 normal_data.push_back( normal.x );
+
1934 normal_data.push_back( normal.y );
+
1935 normal_data.push_back( normal.z );
+
1936
+
1937 float theta2 = 2.f*M_PI*float(i)/float(Ndivisions-1);
+
1938
+
1939 vec3 v2 = make_vec3( disk_size.x*cos(theta2), disk_size.y*sin(theta2), 0 );
+
1940 v2 = rotatePoint(v2,rotation);
+
1941 position_data.push_back( disk_center.x + v2.x );
+
1942 position_data.push_back( disk_center.y + v2.y );
+
1943 position_data.push_back( disk_center.z + v2.z );
+
1944 color_data.push_back( color.r );
+
1945 color_data.push_back( color.g );
+
1946 color_data.push_back( color.b );
+
1947 color_data.push_back( color.a );
+
1948 normal_data.push_back( normal.x );
+
1949 normal_data.push_back( normal.y );
+
1950 normal_data.push_back( normal.z );
+
1951
+
1952 }
+
1953
+
1954 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
1955 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
1956 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
1957 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
1958
+
1959 std::vector<int> texture_data, coord_data;
+
1960 texture_data.resize(position_data.size()/3,0);
+
1961 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1962 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
1963
+
1964 coord_data.assign(position_data.size()/3,coordFlag);
+
1965 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
1966
-
1967 vec3 disk_center = center;
-
1968 vec2 disk_size = size;
-
1969
-
1970 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
-
1971
-
1972 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
1973 disk_center.x = 2.f*disk_center.x - 1.f;
-
1974 disk_center.y = 2.f*disk_center.y - 1.f;
-
1975 disk_size.x = 2.f*disk_size.x;
-
1976 disk_size.y = 2.f*disk_size.y;
-
1977
-
1978 }
-
1979
-
1980 uint textureID;
-
1981 int2 texture_size;
-
1982 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
1967}
+
+
1968
+
+
1969void Visualizer::addDiskByCenter( const vec3 &center, const vec2 &size, const SphericalCoord &rotation, uint Ndivisions, const char* texture_file, CoordinateSystem coordFlag ){
+
1970
+
1971 vec3 disk_center = center;
+
1972 vec2 disk_size = size;
+
1973
+
1974 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
1975
+
1976 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
1977 disk_center.x = 2.f*disk_center.x - 1.f;
+
1978 disk_center.y = 2.f*disk_center.y - 1.f;
+
1979 disk_size.x = 2.f*disk_size.x;
+
1980 disk_size.y = 2.f*disk_size.y;
+
1981
+
1982 }
1983
-
1984 std::vector<float> position_data, color_data, normal_data, uv_data;
-
1985
-
1986 vec3 normal = rotatePoint(make_vec3(0,0,1),rotation);
+
1984 uint textureID;
+
1985 int2 texture_size;
+
1986 primaryShader.setTextureMap(texture_file,textureID,texture_size);
1987
-
1988 for( int i=0; i<Ndivisions-1; i++ ){
+
1988 std::vector<float> position_data, color_data, normal_data, uv_data;
1989
-
1990 //Center
-
1991 position_data.push_back( disk_center.x );
-
1992 position_data.push_back( disk_center.y );
-
1993 position_data.push_back( disk_center.z );
-
1994 normal_data.push_back( normal.x );
-
1995 normal_data.push_back( normal.y);
-
1996 normal_data.push_back( normal.z);
-
1997 uv_data.push_back( 0.5*(texture_size.x-1) );
-
1998 uv_data.push_back( 0.5*(texture_size.y-1) );
-
1999
-
2000 float theta1 = 2.f*M_PI*float(i)/float(Ndivisions-1);
-
2001 vec3 v1 = make_vec3( disk_size.x*cos(theta1), disk_size.y*sin(theta1), 0 );
-
2002 v1 = rotatePoint(v1,rotation);
+
1990 vec3 normal = rotatePoint(make_vec3(0,0,1),rotation);
+
1991
+
1992 for( int i=0; i<Ndivisions-1; i++ ){
+
1993
+
1994 //Center
+
1995 position_data.push_back( disk_center.x );
+
1996 position_data.push_back( disk_center.y );
+
1997 position_data.push_back( disk_center.z );
+
1998 normal_data.push_back( normal.x );
+
1999 normal_data.push_back( normal.y);
+
2000 normal_data.push_back( normal.z);
+
2001 uv_data.push_back( 0.5*(texture_size.x-1) );
+
2002 uv_data.push_back( 0.5*(texture_size.y-1) );
2003
-
2004 position_data.push_back( disk_center.x + v1.x );
-
2005 position_data.push_back( disk_center.y + v1.y );
-
2006 position_data.push_back( disk_center.z + v1.z );
-
2007 normal_data.push_back( normal.x );
-
2008 normal_data.push_back( normal.y );
-
2009 normal_data.push_back( normal.z );
-
2010 uv_data.push_back( (texture_size.x-1)*(0.5f+0.5f*cos(theta1)) );
-
2011 uv_data.push_back( (texture_size.y-1)*(0.5f+0.5f*sin(theta1+M_PI)) );
-
2012
-
2013 float theta2 = 2.f*M_PI*float(i)/float(Ndivisions-1);
-
2014
-
2015 vec3 v2 = make_vec3( disk_size.x*cos(theta2), disk_size.y*sin(theta2), 0 );
-
2016 v2 = rotatePoint(v2,rotation);
-
2017 position_data.push_back( disk_center.x + v2.x );
-
2018 position_data.push_back( disk_center.y + v2.y );
-
2019 position_data.push_back( disk_center.z + v2.z );
-
2020 normal_data.push_back( normal.x );
-
2021 normal_data.push_back( normal.y );
-
2022 normal_data.push_back( normal.z );
-
2023 uv_data.push_back( (texture_size.x-1)*(0.5f+0.5f*cos(theta2)) );
-
2024 uv_data.push_back( (texture_size.y-1)*(0.5f+0.5f*sin(theta2+M_PI)) );
-
2025
-
2026 }
-
2027
-
2028 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
-
2029 color_data.resize( position_data.size()/3*4 );
-
2030 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
-
2031 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
-
2032 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
-
2033
-
2034 std::vector<int> texture_data, coord_data;
-
2035 texture_data.assign(position_data.size()/3,1);
-
2036 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
2037 texture_data.assign(position_data.size()/3,textureID);
-
2038 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
-
2039
-
2040 coord_data.assign(position_data.size()/3,coordFlag);
-
2041 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
-
2042
-
2043}
-
2044
-
2045void Visualizer::addLine( const vec3 &start, const vec3 &end, const RGBcolor &color, uint linewidth, CoordinateSystem coordFlag ){
-
2046 addLine( start, end, make_RGBAcolor(color,1), linewidth, coordFlag );
+
2004 float theta1 = 2.f*M_PI*float(i)/float(Ndivisions-1);
+
2005 vec3 v1 = make_vec3( disk_size.x*cos(theta1), disk_size.y*sin(theta1), 0 );
+
2006 v1 = rotatePoint(v1,rotation);
+
2007
+
2008 position_data.push_back( disk_center.x + v1.x );
+
2009 position_data.push_back( disk_center.y + v1.y );
+
2010 position_data.push_back( disk_center.z + v1.z );
+
2011 normal_data.push_back( normal.x );
+
2012 normal_data.push_back( normal.y );
+
2013 normal_data.push_back( normal.z );
+
2014 uv_data.push_back( (texture_size.x-1)*(0.5f+0.5f*cos(theta1)) );
+
2015 uv_data.push_back( (texture_size.y-1)*(0.5f+0.5f*sin(theta1+M_PI)) );
+
2016
+
2017 float theta2 = 2.f*M_PI*float(i)/float(Ndivisions-1);
+
2018
+
2019 vec3 v2 = make_vec3( disk_size.x*cos(theta2), disk_size.y*sin(theta2), 0 );
+
2020 v2 = rotatePoint(v2,rotation);
+
2021 position_data.push_back( disk_center.x + v2.x );
+
2022 position_data.push_back( disk_center.y + v2.y );
+
2023 position_data.push_back( disk_center.z + v2.z );
+
2024 normal_data.push_back( normal.x );
+
2025 normal_data.push_back( normal.y );
+
2026 normal_data.push_back( normal.z );
+
2027 uv_data.push_back( (texture_size.x-1)*(0.5f+0.5f*cos(theta2)) );
+
2028 uv_data.push_back( (texture_size.y-1)*(0.5f+0.5f*sin(theta2+M_PI)) );
+
2029
+
2030 }
+
2031
+
2032 positionData["triangle"].insert( positionData["triangle"].end(), position_data.begin(), position_data.end() );
+
2033 color_data.resize( position_data.size()/3*4 );
+
2034 colorData["triangle"].insert( colorData["triangle"].end(), color_data.begin(), color_data.end() );
+
2035 normalData["triangle"].insert( normalData["triangle"].end(), normal_data.begin(), normal_data.end() );
+
2036 uvData["triangle"].insert( uvData["triangle"].end(), uv_data.begin(), uv_data.end() );
+
2037
+
2038 std::vector<int> texture_data, coord_data;
+
2039 texture_data.assign(position_data.size()/3,1);
+
2040 textureFlagData["triangle"].insert( textureFlagData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
2041 texture_data.assign(position_data.size()/3,textureID);
+
2042 textureIDData["triangle"].insert( textureIDData["triangle"].end(), texture_data.begin(), texture_data.end() );
+
2043
+
2044 coord_data.assign(position_data.size()/3,coordFlag);
+
2045 coordinateFlagData["triangle"].insert( coordinateFlagData["triangle"].end(), coord_data.begin(), coord_data.end() );
+
2046
2047}
+
2048
-
2049void Visualizer::addLine( const vec3 &start, const vec3 &end, const RGBAcolor &color, uint linewidth, CoordinateSystem coordFlag ){
-
2050
-
2051 line_width = linewidth;
+
+
2049void Visualizer::addLine( const vec3 &start, const vec3 &end, const RGBcolor &color, uint linewidth, CoordinateSystem coordFlag ){
+
2050 addLine( start, end, make_RGBAcolor(color,1), linewidth, coordFlag );
+
2051}
+
2052
-
2053 vec3 s = start; //copy so that can be modified
-
2054 vec3 e = end;
-
2055
-
2056 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
-
2057
-
2058 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
2059 s = 2.f*s - 1.f;
-
2060 e = 2.f*e - 1.f;
+
+
2053void Visualizer::addLine( const vec3 &start, const vec3 &end, const RGBAcolor &color, uint linewidth, CoordinateSystem coordFlag ){
+
2054
+
2055 line_width = linewidth;
+
2056
+
2057 vec3 s = start; //copy so that can be modified
+
2058 vec3 e = end;
+
2059
+
2060 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
2061
-
2062 }
-
2063
-
2064 std::vector<float> position_data, color_data, normal_data, uv_data;
+
2062 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
2063 s = 2.f*s - 1.f;
+
2064 e = 2.f*e - 1.f;
2065
-
2066 position_data.assign( 6, 0 );
-
2067 color_data.assign( 8, 0 );
-
2068 normal_data.assign( 6, 0 );
-
2069 uv_data.assign( 4, 0 );
-
2070
-
2071 //start
-
2072 position_data.at(0) = s.x;
-
2073 position_data.at(1) = s.y;
-
2074 position_data.at(2) = s.z;
-
2075 color_data.at(0) = color.r;
-
2076 color_data.at(1) = color.g;
-
2077 color_data.at(2) = color.b;
-
2078 color_data.at(3) = color.a;
-
2079
-
2080 //end
-
2081 position_data.at(3) = e.x;
-
2082 position_data.at(4) = e.y;
-
2083 position_data.at(5) = e.z;
-
2084 color_data.at(4) = color.r;
-
2085 color_data.at(5) = color.g;
-
2086 color_data.at(6) = color.b;
-
2087 color_data.at(7) = color.a;
-
2088
-
2089 positionData["line"].insert( positionData["line"].end(), position_data.begin(), position_data.end() );
-
2090 colorData["line"].insert( colorData["line"].end(), color_data.begin(), color_data.end() );
-
2091 normalData["line"].insert( normalData["line"].end(), normal_data.begin(), normal_data.end() );
-
2092 uvData["line"].insert( uvData["line"].end(), uv_data.begin(), uv_data.end() );
-
2093
-
2094 std::vector<int> texture_data, coord_data;
-
2095 texture_data.assign(position_data.size()/3,0);
-
2096 textureFlagData["line"].insert( textureFlagData["line"].end(), texture_data.begin(), texture_data.end() );
-
2097 textureIDData["line"].insert( textureIDData["line"].end(), texture_data.begin(), texture_data.end() );
-
2098
-
2099 coord_data.assign(position_data.size()/3,coordFlag);
-
2100 coordinateFlagData["line"].insert( coordinateFlagData["line"].end(), coord_data.begin(), coord_data.end() );
-
2101
-
2102}
-
2103
-
2104void Visualizer::addPoint( const vec3 &position, const RGBcolor &color, uint pointsize, CoordinateSystem coordFlag ){
-
2105 addPoint( position, make_RGBAcolor(color,1), pointsize, coordFlag );
+
2066 }
+
2067
+
2068 std::vector<float> position_data, color_data, normal_data, uv_data;
+
2069
+
2070 position_data.assign( 6, 0 );
+
2071 color_data.assign( 8, 0 );
+
2072 normal_data.assign( 6, 0 );
+
2073 uv_data.assign( 4, 0 );
+
2074
+
2075 //start
+
2076 position_data.at(0) = s.x;
+
2077 position_data.at(1) = s.y;
+
2078 position_data.at(2) = s.z;
+
2079 color_data.at(0) = color.r;
+
2080 color_data.at(1) = color.g;
+
2081 color_data.at(2) = color.b;
+
2082 color_data.at(3) = color.a;
+
2083
+
2084 //end
+
2085 position_data.at(3) = e.x;
+
2086 position_data.at(4) = e.y;
+
2087 position_data.at(5) = e.z;
+
2088 color_data.at(4) = color.r;
+
2089 color_data.at(5) = color.g;
+
2090 color_data.at(6) = color.b;
+
2091 color_data.at(7) = color.a;
+
2092
+
2093 positionData["line"].insert( positionData["line"].end(), position_data.begin(), position_data.end() );
+
2094 colorData["line"].insert( colorData["line"].end(), color_data.begin(), color_data.end() );
+
2095 normalData["line"].insert( normalData["line"].end(), normal_data.begin(), normal_data.end() );
+
2096 uvData["line"].insert( uvData["line"].end(), uv_data.begin(), uv_data.end() );
+
2097
+
2098 std::vector<int> texture_data, coord_data;
+
2099 texture_data.assign(position_data.size()/3,0);
+
2100 textureFlagData["line"].insert( textureFlagData["line"].end(), texture_data.begin(), texture_data.end() );
+
2101 textureIDData["line"].insert( textureIDData["line"].end(), texture_data.begin(), texture_data.end() );
+
2102
+
2103 coord_data.assign(position_data.size()/3,coordFlag);
+
2104 coordinateFlagData["line"].insert( coordinateFlagData["line"].end(), coord_data.begin(), coord_data.end() );
+
2105
2106}
+
2107
-
2108void Visualizer::addPoint( const vec3 &position, const RGBAcolor &color, uint pointsize, CoordinateSystem coordFlag ){
-
2109
-
2110 point_width = pointsize;
+
+
2108void Visualizer::addPoint( const vec3 &position, const RGBcolor &color, uint pointsize, CoordinateSystem coordFlag ){
+
2109 addPoint( position, make_RGBAcolor(color,1), pointsize, coordFlag );
+
2110}
+
2111
-
2112 vec3 p = position; //copy so that can be modified
+
+
2112void Visualizer::addPoint( const vec3 &position, const RGBAcolor &color, uint pointsize, CoordinateSystem coordFlag ){
2113
-
2114 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
2114 point_width = pointsize;
2115
-
2116 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
-
2117 p = 2.f*p - 1.f;
-
2118
-
2119 }
-
2120
-
2121 std::vector<float> position_data, color_data,normal_data, uv_data;
+
2116 vec3 p = position; //copy so that can be modified
+
2117
+
2118 if( coordFlag == 0 ){ //No vertex transformation (i.e., identity matrix)
+
2119
+
2120 //NOTE for vertex positions: OpenGL window coordinates range from -1 to 1, but our rectangle coordinates are from 0 to 1 ---- need to convert
+
2121 p = 2.f*p - 1.f;
2122
-
2123 position_data.assign( 3, 0 );
-
2124 color_data.assign( 4, 0 );
-
2125 normal_data.assign( 3, 0 );
-
2126 uv_data.assign( 2, 0 );
-
2127
-
2128 position_data.at(0) = p.x;
-
2129 position_data.at(1) = p.y;
-
2130 position_data.at(2) = p.z;
-
2131 color_data.at(0) = color.r;
-
2132 color_data.at(1) = color.g;
-
2133 color_data.at(2) = color.b;
-
2134 color_data.at(3) = color.a;
-
2135
-
2136 positionData["point"].insert( positionData["point"].end(), position_data.begin(), position_data.end() );
-
2137 colorData["point"].insert( colorData["point"].end(), color_data.begin(), color_data.end() );
-
2138 normalData["point"].insert( normalData["point"].end(), normal_data.begin(), normal_data.end() );
-
2139 uvData["point"].insert( uvData["point"].end(), uv_data.begin(), uv_data.end() );
-
2140
-
2141 std::vector<int> texture_data, coord_data;
-
2142 texture_data.assign(position_data.size()/3,0);
-
2143 textureFlagData["point"].insert( textureFlagData["point"].end(), texture_data.begin(), texture_data.end() );
-
2144 textureIDData["point"].insert( textureIDData["point"].end(), texture_data.begin(), texture_data.end() );
-
2145
-
2146 coord_data.assign(position_data.size()/3,coordFlag);
-
2147 coordinateFlagData["point"].insert( coordinateFlagData["point"].end(), coord_data.begin(), coord_data.end() );
-
2148
-
2149}
-
2150
-
2151void Visualizer::addSphereByCenter( float radius, const vec3 &center, uint Ndivisions, const RGBcolor &color, CoordinateSystem coordFlag ){
-
2152 addSphereByCenter( radius, center, Ndivisions, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
2123 }
+
2124
+
2125 std::vector<float> position_data, color_data,normal_data, uv_data;
+
2126
+
2127 position_data.assign( 3, 0 );
+
2128 color_data.assign( 4, 0 );
+
2129 normal_data.assign( 3, 0 );
+
2130 uv_data.assign( 2, 0 );
+
2131
+
2132 position_data.at(0) = p.x;
+
2133 position_data.at(1) = p.y;
+
2134 position_data.at(2) = p.z;
+
2135 color_data.at(0) = color.r;
+
2136 color_data.at(1) = color.g;
+
2137 color_data.at(2) = color.b;
+
2138 color_data.at(3) = color.a;
+
2139
+
2140 positionData["point"].insert( positionData["point"].end(), position_data.begin(), position_data.end() );
+
2141 colorData["point"].insert( colorData["point"].end(), color_data.begin(), color_data.end() );
+
2142 normalData["point"].insert( normalData["point"].end(), normal_data.begin(), normal_data.end() );
+
2143 uvData["point"].insert( uvData["point"].end(), uv_data.begin(), uv_data.end() );
+
2144
+
2145 std::vector<int> texture_data, coord_data;
+
2146 texture_data.assign(position_data.size()/3,0);
+
2147 textureFlagData["point"].insert( textureFlagData["point"].end(), texture_data.begin(), texture_data.end() );
+
2148 textureIDData["point"].insert( textureIDData["point"].end(), texture_data.begin(), texture_data.end() );
+
2149
+
2150 coord_data.assign(position_data.size()/3,coordFlag);
+
2151 coordinateFlagData["point"].insert( coordinateFlagData["point"].end(), coord_data.begin(), coord_data.end() );
+
2152
2153}
+
2154
-
2155void Visualizer::addSphereByCenter( float radius, const vec3 &center, uint Ndivisions, const RGBAcolor &color, CoordinateSystem coordFlag ){
-
2156
-
2157 float theta;
-
2158 float dtheta=M_PI/float(Ndivisions);
-
2159 float dphi=2.0*M_PI/float(Ndivisions);
+
+
2155void Visualizer::addSphereByCenter( float radius, const vec3 &center, uint Ndivisions, const RGBcolor &color, CoordinateSystem coordFlag ){
+
2156 addSphereByCenter( radius, center, Ndivisions, make_RGBAcolor(color.r,color.g,color.b,1), coordFlag );
+
2157}
+
+
2158
+
+
2159void Visualizer::addSphereByCenter( float radius, const vec3 &center, uint Ndivisions, const RGBAcolor &color, CoordinateSystem coordFlag ){
2160
-
2161 //bottom cap
-
2162 for( int j=0; j<Ndivisions; j++ ){
-
2163
-
2164 vec3 v0 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI, 0 ) );
-
2165 vec3 v1 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+dtheta, float(j)*dphi ) );
-
2166 vec3 v2 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+dtheta, float(j+1)*dphi ) );
+
2161 float theta;
+
2162 float dtheta=M_PI/float(Ndivisions);
+
2163 float dphi=2.0*M_PI/float(Ndivisions);
+
2164
+
2165 //bottom cap
+
2166 for( int j=0; j<Ndivisions; j++ ){
2167
-
2168 addTriangle(v0,v1,v2,color,coordFlag);
-
2169
-
2170 }
+
2168 vec3 v0 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI, 0 ) );
+
2169 vec3 v1 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+dtheta, float(j)*dphi ) );
+
2170 vec3 v2 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+dtheta, float(j+1)*dphi ) );
2171
-
2172 //top cap
-
2173 for( int j=0; j<Ndivisions; j++ ){
-
2174
-
2175 vec3 v0 = center + sphere2cart( make_SphericalCoord(radius, 0.5*M_PI, 0 ) );
-
2176 vec3 v1 = center + sphere2cart( make_SphericalCoord(radius, 0.5*M_PI-dtheta, float(j)*dphi ) );
-
2177 vec3 v2 = center + sphere2cart( make_SphericalCoord(radius, 0.5*M_PI-dtheta, float(j+1)*dphi ) );
+
2172 addTriangle(v0,v1,v2,color,coordFlag);
+
2173
+
2174 }
+
2175
+
2176 //top cap
+
2177 for( int j=0; j<Ndivisions; j++ ){
2178
-
2179 addTriangle(v2,v1,v0,color,coordFlag);
-
2180
-
2181 }
+
2179 vec3 v0 = center + sphere2cart( make_SphericalCoord(radius, 0.5*M_PI, 0 ) );
+
2180 vec3 v1 = center + sphere2cart( make_SphericalCoord(radius, 0.5*M_PI-dtheta, float(j)*dphi ) );
+
2181 vec3 v2 = center + sphere2cart( make_SphericalCoord(radius, 0.5*M_PI-dtheta, float(j+1)*dphi ) );
2182
-
2183 //middle
-
2184 for( int j=0; j<Ndivisions; j++ ){
-
2185 for( int i=1; i<Ndivisions-1; i++ ){
+
2183 addTriangle(v2,v1,v0,color,coordFlag);
+
2184
+
2185 }
2186
-
2187 vec3 v0 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i)*dtheta, float(j)*dphi ) );
-
2188 vec3 v1 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i+1)*dtheta, float(j)*dphi ) );
-
2189 vec3 v2 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i+1)*dtheta, float(j+1)*dphi ) );
-
2190 vec3 v3 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i)*dtheta, float(j+1)*dphi ) );
-
2191
-
2192 addTriangle(v0,v1,v2,color,coordFlag);
-
2193 addTriangle(v0,v2,v3,color,coordFlag);
-
2194
-
2195 }
-
2196 }
-
2197
-
2198}
-
2199
-
2200void Visualizer::addSkyDomeByCenter( float radius, const vec3 &center, uint Ndivisions, const char* texture_file, int layer ){
-
2201 addSkyDomeByCenter( radius, center, Ndivisions, texture_file );
+
2187 //middle
+
2188 for( int j=0; j<Ndivisions; j++ ){
+
2189 for( int i=1; i<Ndivisions-1; i++ ){
+
2190
+
2191 vec3 v0 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i)*dtheta, float(j)*dphi ) );
+
2192 vec3 v1 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i+1)*dtheta, float(j)*dphi ) );
+
2193 vec3 v2 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i+1)*dtheta, float(j+1)*dphi ) );
+
2194 vec3 v3 = center + sphere2cart( make_SphericalCoord(radius, -0.5*M_PI+float(i)*dtheta, float(j+1)*dphi ) );
+
2195
+
2196 addTriangle(v0,v1,v2,color,coordFlag);
+
2197 addTriangle(v0,v2,v3,color,coordFlag);
+
2198
+
2199 }
+
2200 }
+
2201
2202}
+
2203
-
2204void Visualizer::addSkyDomeByCenter( float radius, const vec3 &center, uint Ndivisions, const char* texture_file ){
-
2205
-
2206
-
2207 int Ntheta=Ndivisions;
-
2208 int Nphi=2*Ndivisions;
+
+
2204void Visualizer::addSkyDomeByCenter( float radius, const vec3 &center, uint Ndivisions, const char* texture_file, int layer ){
+
2205 addSkyDomeByCenter( radius, center, Ndivisions, texture_file );
+
2206}
+
+
2207
+
2208void Visualizer::addSkyDomeByCenter( float radius, const vec3 &center, uint Ndivisions, const char* texture_file ){
2209
-
2210 float thetaStart = -0.1*M_PI;
-
2211
-
2212 float dtheta=(0.5*M_PI-thetaStart)/float(Ntheta-1);
-
2213 float dphi=2.f*M_PI/float(Nphi-1);
-
2214
-
2215 uint textureID;
-
2216 int2 texture_size;
-
2217 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
2210
+
2211 int Ntheta=Ndivisions;
+
2212 int Nphi=2*Ndivisions;
+
2213
+
2214 float thetaStart = -0.1*M_PI;
+
2215
+
2216 float dtheta=(0.5*M_PI-thetaStart)/float(Ntheta-1);
+
2217 float dphi=2.f*M_PI/float(Nphi-1);
2218
-
2219 std::vector<float> color_data, normal_data;
-
2220 std::vector<int> texture_data, coord_data;
-
2221
-
2222 color_data.assign(24,0);
-
2223 normal_data.assign(18,0);
-
2224
-
2225 for( uint j=1; j<Nphi; j++ ){
-
2226 for( uint i=1; i<Ntheta; i++ ){
-
2227
-
2228 float theta = thetaStart+i*dtheta;
-
2229 float phi=j*dphi;
-
2230
-
2231 vec3 v0( center.x+radius*cos(theta)*cos(phi),center.y+radius*cos(theta)*sin(phi), center.z+radius*(sin(theta)) );
-
2232 vec2 uv0( float(Nphi-j)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i)/float(Ntheta-1)*(texture_size.y-1) );
-
2233
-
2234 vec3 v1( center.x+radius*cos(theta)*cos(phi+dphi),center.y+radius*cos(theta)*sin(phi+dphi), center.z+radius*(sin(theta)) );
-
2235 vec2 uv1( float(Nphi-j-1)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i)/float(Ntheta-1)*(texture_size.y-1) );
-
2236
-
2237 vec3 v2( center.x+radius*cos(theta+dtheta)*cos(phi+dphi),center.y+radius*cos(theta+dtheta)*sin(phi+dphi), center.z+radius*(sin(theta+dtheta)) );
-
2238 vec2 uv2( float(Nphi-j-1)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i-1)/float(Ntheta-1)*(texture_size.y-1) );
-
2239
-
2240 vec3 v3( center.x+radius*cos(theta+dtheta)*cos(phi),center.y+radius*cos(theta+dtheta)*sin(phi), center.z+radius*(sin(theta+dtheta)) );
-
2241 vec2 uv3( float(Nphi-j)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i-1)/float(Ntheta-1)*(texture_size.y-1) );
-
2242
-
2243 positionData["sky"].push_back(v0.x);
-
2244 positionData["sky"].push_back(v0.y);
-
2245 positionData["sky"].push_back(v0.z);
-
2246 positionData["sky"].push_back(v1.x);
-
2247 positionData["sky"].push_back(v1.y);
-
2248 positionData["sky"].push_back(v1.z);
-
2249 positionData["sky"].push_back(v2.x);
-
2250 positionData["sky"].push_back(v2.y);
-
2251 positionData["sky"].push_back(v2.z);
-
2252 uvData["sky"].push_back(uv0.x);
-
2253 uvData["sky"].push_back(uv0.y);
-
2254 uvData["sky"].push_back(uv1.x);
-
2255 uvData["sky"].push_back(uv1.y);
-
2256 uvData["sky"].push_back(uv2.x);
-
2257 uvData["sky"].push_back(uv2.y);
-
2258
-
2259 positionData["sky"].push_back(v0.x);
-
2260 positionData["sky"].push_back(v0.y);
-
2261 positionData["sky"].push_back(v0.z);
-
2262 positionData["sky"].push_back(v2.x);
-
2263 positionData["sky"].push_back(v2.y);
-
2264 positionData["sky"].push_back(v2.z);
-
2265 positionData["sky"].push_back(v3.x);
-
2266 positionData["sky"].push_back(v3.y);
-
2267 positionData["sky"].push_back(v3.z);
-
2268 uvData["sky"].push_back(uv0.x);
-
2269 uvData["sky"].push_back(uv0.y);
-
2270 uvData["sky"].push_back(uv2.x);
-
2271 uvData["sky"].push_back(uv2.y);
-
2272 uvData["sky"].push_back(uv3.x);
-
2273 uvData["sky"].push_back(uv3.y);
-
2274
-
2275 texture_data.assign(6,1);
-
2276 textureFlagData["sky"].insert( textureFlagData["sky"].end(), texture_data.begin(), texture_data.end() );
-
2277 texture_data.assign(6,textureID);
-
2278 textureIDData["sky"].insert( textureIDData["sky"].end(), texture_data.begin(), texture_data.end() );
-
2279
-
2280 coord_data.assign(6,COORDINATES_CARTESIAN);
-
2281 coordinateFlagData["sky"].insert( coordinateFlagData["sky"].end(), coord_data.begin(), coord_data.end() );
-
2282
-
2283 colorData["sky"].insert( colorData["sky"].end(), color_data.begin(), color_data.end() );
-
2284 normalData["sky"].insert( normalData["sky"].end(), normal_data.begin(), normal_data.end() );
-
2285
-
2286 }
-
2287 }
-
2288
+
2219 uint textureID;
+
2220 int2 texture_size;
+
2221 primaryShader.setTextureMap(texture_file,textureID,texture_size);
+
2222
+
2223 std::vector<float> color_data, normal_data;
+
2224 std::vector<int> texture_data, coord_data;
+
2225
+
2226 color_data.assign(24,0);
+
2227 normal_data.assign(18,0);
+
2228
+
2229 for( uint j=1; j<Nphi; j++ ){
+
2230 for( uint i=1; i<Ntheta; i++ ){
+
2231
+
2232 float theta = thetaStart+i*dtheta;
+
2233 float phi=j*dphi;
+
2234
+
2235 vec3 v0( center.x+radius*cos(theta)*cos(phi),center.y+radius*cos(theta)*sin(phi), center.z+radius*(sin(theta)) );
+
2236 vec2 uv0( float(Nphi-j)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i)/float(Ntheta-1)*(texture_size.y-1) );
+
2237
+
2238 vec3 v1( center.x+radius*cos(theta)*cos(phi+dphi),center.y+radius*cos(theta)*sin(phi+dphi), center.z+radius*(sin(theta)) );
+
2239 vec2 uv1( float(Nphi-j-1)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i)/float(Ntheta-1)*(texture_size.y-1) );
+
2240
+
2241 vec3 v2( center.x+radius*cos(theta+dtheta)*cos(phi+dphi),center.y+radius*cos(theta+dtheta)*sin(phi+dphi), center.z+radius*(sin(theta+dtheta)) );
+
2242 vec2 uv2( float(Nphi-j-1)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i-1)/float(Ntheta-1)*(texture_size.y-1) );
+
2243
+
2244 vec3 v3( center.x+radius*cos(theta+dtheta)*cos(phi),center.y+radius*cos(theta+dtheta)*sin(phi), center.z+radius*(sin(theta+dtheta)) );
+
2245 vec2 uv3( float(Nphi-j)/float(Nphi-1)*(texture_size.x-1), float(Ntheta-i-1)/float(Ntheta-1)*(texture_size.y-1) );
+
2246
+
2247 positionData["sky"].push_back(v0.x);
+
2248 positionData["sky"].push_back(v0.y);
+
2249 positionData["sky"].push_back(v0.z);
+
2250 positionData["sky"].push_back(v1.x);
+
2251 positionData["sky"].push_back(v1.y);
+
2252 positionData["sky"].push_back(v1.z);
+
2253 positionData["sky"].push_back(v2.x);
+
2254 positionData["sky"].push_back(v2.y);
+
2255 positionData["sky"].push_back(v2.z);
+
2256 uvData["sky"].push_back(uv0.x);
+
2257 uvData["sky"].push_back(uv0.y);
+
2258 uvData["sky"].push_back(uv1.x);
+
2259 uvData["sky"].push_back(uv1.y);
+
2260 uvData["sky"].push_back(uv2.x);
+
2261 uvData["sky"].push_back(uv2.y);
+
2262
+
2263 positionData["sky"].push_back(v0.x);
+
2264 positionData["sky"].push_back(v0.y);
+
2265 positionData["sky"].push_back(v0.z);
+
2266 positionData["sky"].push_back(v2.x);
+
2267 positionData["sky"].push_back(v2.y);
+
2268 positionData["sky"].push_back(v2.z);
+
2269 positionData["sky"].push_back(v3.x);
+
2270 positionData["sky"].push_back(v3.y);
+
2271 positionData["sky"].push_back(v3.z);
+
2272 uvData["sky"].push_back(uv0.x);
+
2273 uvData["sky"].push_back(uv0.y);
+
2274 uvData["sky"].push_back(uv2.x);
+
2275 uvData["sky"].push_back(uv2.y);
+
2276 uvData["sky"].push_back(uv3.x);
+
2277 uvData["sky"].push_back(uv3.y);
+
2278
+
2279 texture_data.assign(6,1);
+
2280 textureFlagData["sky"].insert( textureFlagData["sky"].end(), texture_data.begin(), texture_data.end() );
+
2281 texture_data.assign(6,textureID);
+
2282 textureIDData["sky"].insert( textureIDData["sky"].end(), texture_data.begin(), texture_data.end() );
+
2283
+
2284 coord_data.assign(6,COORDINATES_CARTESIAN);
+
2285 coordinateFlagData["sky"].insert( coordinateFlagData["sky"].end(), coord_data.begin(), coord_data.end() );
+
2286
+
2287 colorData["sky"].insert( colorData["sky"].end(), color_data.begin(), color_data.end() );
+
2288 normalData["sky"].insert( normalData["sky"].end(), normal_data.begin(), normal_data.end() );
2289
-
2290
-
2291}
+
2290 }
+
2291 }
2292
-
2293void Visualizer::addTextboxByCenter( const char* textstring, const vec3 &center, const SphericalCoord &rotation, const RGBcolor &fontcolor, uint fontsize, const char* fontname, CoordinateSystem coordFlag ){
+
2293
2294
-
2295 FT_Library ft; //FreeType objects
-
2296 FT_Face face;
-
2297
-
2298 //initialize the freetype library
-
2299 if(FT_Init_FreeType(&ft)!=0) {
-
2300 helios_runtime_error("ERROR (Visualizer::addTextboxByCenter): Could not init freetype library");
-
2301 }
-
2302
-
2303 std::vector<std::vector<uint> > maskData; //This will hold the letter mask data
-
2304
-
2305 //Load the font
-
2306 char font[100];
-
2307 std::snprintf(font,100,"plugins/visualizer/fonts/%s.ttf",fontname);
-
2308 if(FT_New_Face(ft, font, 0, &face)!=0) {
-
2309 helios_runtime_error("ERROR (Visualizer::addTextboxByCenter): Could not open font '" + std::string(fontname) + "'");
-
2310 }
-
2311
-
2312 //Load the font size
-
2313 FT_Set_Pixel_Sizes(face, 0, fontsize);
-
2314
-
2315 //x- and y- size of a pixel in [0,1] normalized coordinates
-
2316 float sx=1.f/float(Wdisplay);
-
2317 float sy=1.f/float(Hdisplay);
+
2295}
+
2296
+
+
2297void Visualizer::addTextboxByCenter( const char* textstring, const vec3 &center, const SphericalCoord &rotation, const RGBcolor &fontcolor, uint fontsize, const char* fontname, CoordinateSystem coordFlag ){
+
2298
+
2299 FT_Library ft; //FreeType objects
+
2300 FT_Face face;
+
2301
+
2302 //initialize the freetype library
+
2303 if(FT_Init_FreeType(&ft)!=0) {
+
2304 helios_runtime_error("ERROR (Visualizer::addTextboxByCenter): Could not init freetype library");
+
2305 }
+
2306
+
2307 std::vector<std::vector<uint> > maskData; //This will hold the letter mask data
+
2308
+
2309 //Load the font
+
2310 char font[100];
+
2311 std::snprintf(font,100,"plugins/visualizer/fonts/%s.ttf",fontname);
+
2312 if(FT_New_Face(ft, font, 0, &face)!=0) {
+
2313 helios_runtime_error("ERROR (Visualizer::addTextboxByCenter): Could not open font '" + std::string(fontname) + "'");
+
2314 }
+
2315
+
2316 //Load the font size
+
2317 FT_Set_Pixel_Sizes(face, 0, fontsize);
2318
-
2319 FT_GlyphSlot gg = face->glyph; //FreeType glyph for font `fontname' and size `fontsize'
-
2320
-
2321 //first, find out how wide the text is going to be
-
2322 //This is because we need to know the width beforehand if we want to center the text
-
2323 float wtext=0;
-
2324 float htext=0;
-
2325 const char* textt = textstring;
-
2326 for( const char* p = textt; *p; p++) { //looping over each letter in `textstring'
-
2327 if(FT_Load_Char(face, *p, FT_LOAD_RENDER)) //load the letter
-
2328 continue;
-
2329 float offset=0, scale=1;
-
2330 if(strncmp(p,"_",1)==0){ //subscript
-
2331 offset=-0.3f*sy;
-
2332 scale=0.5;
-
2333 continue;
-
2334 }else if(strncmp(p,"^",1)==0){ //superscript
-
2335 offset=0.3f*sy;
+
2319 //x- and y- size of a pixel in [0,1] normalized coordinates
+
2320 float sx=1.f/float(Wdisplay);
+
2321 float sy=1.f/float(Hdisplay);
+
2322
+
2323 FT_GlyphSlot gg = face->glyph; //FreeType glyph for font `fontname' and size `fontsize'
+
2324
+
2325 //first, find out how wide the text is going to be
+
2326 //This is because we need to know the width beforehand if we want to center the text
+
2327 float wtext=0;
+
2328 float htext=0;
+
2329 const char* textt = textstring;
+
2330 for( const char* p = textt; *p; p++) { //looping over each letter in `textstring'
+
2331 if(FT_Load_Char(face, *p, FT_LOAD_RENDER)) //load the letter
+
2332 continue;
+
2333 float offset=0, scale=1;
+
2334 if(strncmp(p,"_",1)==0){ //subscript
+
2335 offset=-0.3f*sy;
2336 scale=0.5;
2337 continue;
-
2338 }
-
2339 wtext += gg->bitmap.width*sx*scale;
-
2340 htext = std::max( gg->bitmap.rows*sy, htext );
-
2341 }
-
2342
-
2343 //location of the center of our textbox
-
2344 float xt=center.x-0.5f*wtext;
-
2345 float yt=center.y-0.5f*htext;
+
2338 }else if(strncmp(p,"^",1)==0){ //superscript
+
2339 offset=0.3f*sy;
+
2340 scale=0.5;
+
2341 continue;
+
2342 }
+
2343 wtext += gg->bitmap.width*sx*scale;
+
2344 htext = std::max( gg->bitmap.rows*sy, htext );
+
2345 }
2346
-
2347 if( message_flag ){
-
2348 if( coordFlag==COORDINATES_WINDOW_NORMALIZED ){
-
2349 if(xt<0 || xt>1){
-
2350 if( message_flag ) {
-
2351 std::cout << "WARNING (Visualizer::addTextboxByCenter): text x-coordinate is outside of window area" << std::endl;
-
2352 }
-
2353 }
-
2354 if(yt<0 || yt>1){
-
2355 if( message_flag ) {
-
2356 std::cout << "WARNING (Visualizer::addTextboxByCenter): text y-coordinate is outside of window area" << std::endl;
-
2357 }
-
2358 }
-
2359 }
-
2360 }
-
2361
-
2362 FT_GlyphSlot g = face->glyph; //Another FreeType glyph for font `fontname' and size `fontsize'
-
2363
-
2364 const char* text = textstring;
+
2347 //location of the center of our textbox
+
2348 float xt=center.x-0.5f*wtext;
+
2349 float yt=center.y-0.5f*htext;
+
2350
+
2351 if( message_flag ){
+
2352 if( coordFlag==COORDINATES_WINDOW_NORMALIZED ){
+
2353 if(xt<0 || xt>1){
+
2354 if( message_flag ) {
+
2355 std::cout << "WARNING (Visualizer::addTextboxByCenter): text x-coordinate is outside of window area" << std::endl;
+
2356 }
+
2357 }
+
2358 if(yt<0 || yt>1){
+
2359 if( message_flag ) {
+
2360 std::cout << "WARNING (Visualizer::addTextboxByCenter): text y-coordinate is outside of window area" << std::endl;
+
2361 }
+
2362 }
+
2363 }
+
2364 }
2365
-
2366 float offset=0; //baseline offset for subscript/superscript
-
2367 float scale=1; //scaling factor for subscript/superscript
-
2368 for( const char* p = text; *p; p++) { //looping over each letter in `textstring'
+
2366 FT_GlyphSlot g = face->glyph; //Another FreeType glyph for font `fontname' and size `fontsize'
+
2367
+
2368 const char* text = textstring;
2369
-
2370 if(FT_Load_Char(face, *p, FT_LOAD_RENDER)) //load the letter
-
2371 continue;
-
2372
-
2373 if(strncmp(p,"_",1)==0){ //subscript
-
2374 offset=-0.3*sy;
-
2375 scale=0.5;
-
2376 continue;
-
2377 }else if(strncmp(p,"^",1)==0){ //superscript
-
2378 offset=0.3*sy;
+
2370 float offset=0; //baseline offset for subscript/superscript
+
2371 float scale=1; //scaling factor for subscript/superscript
+
2372 for( const char* p = text; *p; p++) { //looping over each letter in `textstring'
+
2373
+
2374 if(FT_Load_Char(face, *p, FT_LOAD_RENDER)) //load the letter
+
2375 continue;
+
2376
+
2377 if(strncmp(p,"_",1)==0){ //subscript
+
2378 offset=-0.3*sy;
2379 scale=0.5;
2380 continue;
-
2381 }
-
2382
-
2383 //Copy the letter's mask into 2D `maskData' structure
-
2384 int2 tsize = make_int2( g->bitmap.width, g->bitmap.rows );
-
2385 maskData.resize(tsize.y);
-
2386 for(int j=0;j<tsize.y;j++){
-
2387 maskData.at(j).resize(tsize.x);
-
2388 for(int i=0;i<tsize.x;i++){
-
2389 maskData.at(j).at(i) = (uint)g->bitmap.buffer[i+j*tsize.x];
-
2390 }
-
2391 }
-
2392
-
2393 //size of this letter (i.e., the size of the rectangle we're going to make
-
2394 vec2 lettersize = make_vec2( g->bitmap.width*scale*sx, g->bitmap.rows*scale*sy );
-
2395
-
2396 //position of this letter (i.e., the center of the rectangle we're going to make
-
2397 vec3 letterposition = make_vec3(xt + g->bitmap_left*sx + 0.5*lettersize.x , yt + g->bitmap_top*( sy+offset ) - 0.5*lettersize.y, center.z );
-
2398
-
2399 //advance the x- and y- letter position
-
2400 xt += (g->advance.x >> 6) * sx * scale;
-
2401 yt += (g->advance.y >> 6) * sy * scale;
+
2381 }else if(strncmp(p,"^",1)==0){ //superscript
+
2382 offset=0.3*sy;
+
2383 scale=0.5;
+
2384 continue;
+
2385 }
+
2386
+
2387 //Copy the letter's mask into 2D `maskData' structure
+
2388 int2 tsize = make_int2( g->bitmap.width, g->bitmap.rows );
+
2389 maskData.resize(tsize.y);
+
2390 for(int j=0;j<tsize.y;j++){
+
2391 maskData.at(j).resize(tsize.x);
+
2392 for(int i=0;i<tsize.x;i++){
+
2393 maskData.at(j).at(i) = (uint)g->bitmap.buffer[i+j*tsize.x];
+
2394 }
+
2395 }
+
2396
+
2397 //size of this letter (i.e., the size of the rectangle we're going to make
+
2398 vec2 lettersize = make_vec2( g->bitmap.width*scale*sx, g->bitmap.rows*scale*sy );
+
2399
+
2400 //position of this letter (i.e., the center of the rectangle we're going to make
+
2401 vec3 letterposition = make_vec3(xt + g->bitmap_left*sx + 0.5*lettersize.x , yt + g->bitmap_top*( sy+offset ) - 0.5*lettersize.y, center.z );
2402
-
2403 //reset the offset and scale
-
2404 offset=0;
-
2405 scale=1;
+
2403 //advance the x- and y- letter position
+
2404 xt += (g->advance.x >> 6) * sx * scale;
+
2405 yt += (g->advance.y >> 6) * sy * scale;
2406
-
2407 if( lettersize.x==0 || lettersize.y==0 ){ //if the size of the letter is 0, don't add a rectangle
-
2408 continue;
-
2409 }
+
2407 //reset the offset and scale
+
2408 offset=0;
+
2409 scale=1;
2410
-
2411 Glyph glyph;
-
2412 glyph.data = maskData;
-
2413 glyph.size = tsize;
-
2414 glyph.filename = (char*)""; //Note: we are setting an empty filename to make sure the shader loads a new texture
-
2415
-
2416 addRectangleByCenter(letterposition,lettersize,rotation,make_RGBcolor(fontcolor.r,fontcolor.g,fontcolor.b),&glyph,coordFlag);
-
2417
-
2418 }
+
2411 if( lettersize.x==0 || lettersize.y==0 ){ //if the size of the letter is 0, don't add a rectangle
+
2412 continue;
+
2413 }
+
2414
+
2415 Glyph glyph;
+
2416 glyph.data = maskData;
+
2417 glyph.size = tsize;
+
2418 glyph.filename = (char*)""; //Note: we are setting an empty filename to make sure the shader loads a new texture
2419
-
2420 FT_Done_FreeType(ft);
+
2420 addRectangleByCenter(letterposition,lettersize,rotation,make_RGBcolor(fontcolor.r,fontcolor.g,fontcolor.b),&glyph,coordFlag);
2421
-
2422}
+
2422 }
2423
-
2424void Visualizer::addColorbarByCenter(const char* title, const helios::vec2 &size, const helios::vec3 &center, const helios::RGBcolor &font_color, const Colormap &colormap ){
+
2424 FT_Done_FreeType(ft);
2425
-
2426 uint Ndivs = 50;
+
2426}
+
2427
-
2428 uint Nticks = 4;
+
2428void Visualizer::addColorbarByCenter(const char* title, const helios::vec2 &size, const helios::vec3 &center, const helios::RGBcolor &font_color, const Colormap &colormap ){
2429
-
2430 if( !colorbar_ticks.empty() ){
-
2431 Nticks = colorbar_ticks.size();
-
2432 }
+
2430 uint Ndivs = 50;
+
2431
+
2432 uint Nticks = 4;
2433
-
2434 float dx = size.x/float(Ndivs);
-
2435
-
2436 float cmin = clamp(colormap.getLowerLimit(), -1e7f, 1e7f);
-
2437 float cmax = clamp(colormap.getUpperLimit(), -1e7f, 1e7f);
-
2438
-
2439 for( uint i=0; i<Ndivs; i++ ){
-
2440
-
2441 float x = center.x -0.5f*size.x + (float(i)+0.5)*dx;
+
2434 if( !colorbar_ticks.empty() ){
+
2435 Nticks = colorbar_ticks.size();
+
2436 }
+
2437
+
2438 float dx = size.x/float(Ndivs);
+
2439
+
2440 float cmin = clamp(colormap.getLowerLimit(), -1e7f, 1e7f);
+
2441 float cmax = clamp(colormap.getUpperLimit(), -1e7f, 1e7f);
2442
-
2443 RGBcolor color = colormap.query( cmin+float(i)/float(Ndivs)*(cmax-cmin) );
+
2443 for( uint i=0; i<Ndivs; i++ ){
2444
-
2445 addRectangleByCenter( make_vec3(x,center.y,center.z), make_vec2(dx,0.5f*size.y), make_SphericalCoord(0,0), color, COORDINATES_WINDOW_NORMALIZED );
+
2445 float x = center.x -0.5f*size.x + (float(i)+0.5)*dx;
2446
-
2447 }
+
2447 RGBcolor color = colormap.query( cmin+float(i)/float(Ndivs)*(cmax-cmin) );
2448
-
2449 std::vector<vec3> border;
-
2450 border.push_back( make_vec3( center.x-0.5*size.x, center.y+0.25*size.y, center.z-0.001 ) );
-
2451 border.push_back( make_vec3( center.x+0.5*size.x, center.y+0.25*size.y, center.z-0.001 ) );
-
2452 border.push_back( make_vec3( center.x+0.5*size.x, center.y-0.25*size.y, center.z-0.001 ) );
-
2453 border.push_back( make_vec3( center.x-0.5*size.x, center.y-0.25*size.y, center.z-0.001 ) );
+
2449 addRectangleByCenter( make_vec3(x,center.y,center.z), make_vec2(dx,0.5f*size.y), make_SphericalCoord(0,0), color, COORDINATES_WINDOW_NORMALIZED );
+
2450
+
2451 }
+
2452
+
2453 std::vector<vec3> border;
2454 border.push_back( make_vec3( center.x-0.5*size.x, center.y+0.25*size.y, center.z-0.001 ) );
-
2455
-
2456 for( uint i=0; i<border.size()-1; i++ ){
-
2457 addLine( border.at(i), border.at(i+1), font_color, 1, COORDINATES_WINDOW_NORMALIZED );
-
2458 }
+
2455 border.push_back( make_vec3( center.x+0.5*size.x, center.y+0.25*size.y, center.z-0.001 ) );
+
2456 border.push_back( make_vec3( center.x+0.5*size.x, center.y-0.25*size.y, center.z-0.001 ) );
+
2457 border.push_back( make_vec3( center.x-0.5*size.x, center.y-0.25*size.y, center.z-0.001 ) );
+
2458 border.push_back( make_vec3( center.x-0.5*size.x, center.y+0.25*size.y, center.z-0.001 ) );
2459
-
2460 dx = size.x/float(Nticks-1);
-
2461
-
2462 std::vector<vec3> ticks;
-
2463 ticks.resize(2);
-
2464 for( uint i=0; i<Nticks; i++ ){
+
2460 for( uint i=0; i<border.size()-1; i++ ){
+
2461 addLine( border.at(i), border.at(i+1), font_color, 1, COORDINATES_WINDOW_NORMALIZED );
+
2462 }
+
2463
+
2464 dx = size.x/float(Nticks-1);
2465
-
2467 char textstr[10],precision[10];
-
2468
-
2469 float x;
-
2470 float value;
-
2471 if( colorbar_ticks.size()==0 ){
-
2472 x = center.x -0.5f*size.x + float(i)*dx;
-
2473 value = cmin+float(i)/float(Nticks-1)*(cmax-cmin);
-
2474 }else{
-
2475 value = colorbar_ticks.at(i);
-
2476 x = center.x -0.5f*size.x + (value-cmin)/(cmax-cmin)*size.x;
-
2477 }
-
2478
-
2479 int d1, d2;
-
2480 if( std::fabs(floor(value)-value)<1e-4 ){ //value is an integer
-
2481 std::snprintf(precision,10,"%%d");
-
2482 std::snprintf(textstr,10,precision,int(floor(value)));
-
2483 }else if( value!=0.f ){ //value needs decimal formatting
-
2484 d1 = floor(log10(std::fabs(value)));
-
2485 d2= -d1+1;
-
2486 if(d2<1){
-
2487 d2=1;
-
2488 }
-
2489 std::snprintf(precision,10,"%%%u.%uf",(char)abs(d1)+1,(char)d2);
-
2490 std::snprintf(textstr,10,precision,value);
-
2491 }
-
2492
-
2493 // tick labels
-
2494 addTextboxByCenter( textstr, make_vec3(x,center.y-0.4f*size.y,center.z), make_SphericalCoord(0,0), font_color, colorbar_fontsize, "OpenSans-Regular", COORDINATES_WINDOW_NORMALIZED );
-
2495
-
2496 if(i>0 && i<Nticks-1){
-
2497 ticks[0] = make_vec3( x, center.y-0.25f*size.y, center.z-0.001f );
-
2498 ticks[1] = make_vec3( x, center.y-0.25f*size.y+0.05f*size.y, center.z-0.001f );
-
2499 addLine(ticks[0],ticks[1],make_RGBcolor(0.25,0.25,0.25),1,COORDINATES_WINDOW_NORMALIZED);
-
2500 ticks[0] = make_vec3( x, center.y+0.25f*size.y, center.z-0.001f );
-
2501 ticks[1] = make_vec3( x, center.y+0.25f*size.y-0.05f*size.y, center.z-0.001f );
-
2502 addLine(ticks[0],ticks[1], make_RGBcolor(0.25,0.25,0.25),1,COORDINATES_WINDOW_NORMALIZED);
-
2503 }
-
2504
-
2505 }
-
2506
-
2507 //title
-
2508 addTextboxByCenter( title, make_vec3( center.x, center.y+0.4*size.y, center.z), make_SphericalCoord(0,0), font_color, colorbar_fontsize, "CantoraOne-Regular", COORDINATES_WINDOW_NORMALIZED );
-
2509
-
2510}
-
2511
-
2512void Visualizer::addCoordinateAxes(){
-
2513 addCoordinateAxes(helios::make_vec3(0,0,0), helios::make_vec3(1,1,1), "positive");
+
2466 std::vector<vec3> ticks;
+
2467 ticks.resize(2);
+
2468 for( uint i=0; i<Nticks; i++ ){
+
2469
+
2471 char textstr[10],precision[10];
+
2472
+
2473 float x;
+
2474 float value;
+
2475 if( colorbar_ticks.size()==0 ){
+
2476 x = center.x -0.5f*size.x + float(i)*dx;
+
2477 value = cmin+float(i)/float(Nticks-1)*(cmax-cmin);
+
2478 }else{
+
2479 value = colorbar_ticks.at(i);
+
2480 x = center.x -0.5f*size.x + (value-cmin)/(cmax-cmin)*size.x;
+
2481 }
+
2482
+
2483 int d1, d2;
+
2484 if( std::fabs(floor(value)-value)<1e-4 ){ //value is an integer
+
2485 std::snprintf(precision,10,"%%d");
+
2486 std::snprintf(textstr,10,precision,int(floor(value)));
+
2487 }else if( value!=0.f ){ //value needs decimal formatting
+
2488 d1 = floor(log10(std::fabs(value)));
+
2489 d2= -d1+1;
+
2490 if(d2<1){
+
2491 d2=1;
+
2492 }
+
2493 std::snprintf(precision,10,"%%%u.%uf",(char)abs(d1)+1,(char)d2);
+
2494 std::snprintf(textstr,10,precision,value);
+
2495 }
+
2496
+
2497 // tick labels
+
2498 addTextboxByCenter( textstr, make_vec3(x,center.y-0.4f*size.y,center.z), make_SphericalCoord(0,0), font_color, colorbar_fontsize, "OpenSans-Regular", COORDINATES_WINDOW_NORMALIZED );
+
2499
+
2500 if(i>0 && i<Nticks-1){
+
2501 ticks[0] = make_vec3( x, center.y-0.25f*size.y, center.z-0.001f );
+
2502 ticks[1] = make_vec3( x, center.y-0.25f*size.y+0.05f*size.y, center.z-0.001f );
+
2503 addLine(ticks[0],ticks[1],make_RGBcolor(0.25,0.25,0.25),1,COORDINATES_WINDOW_NORMALIZED);
+
2504 ticks[0] = make_vec3( x, center.y+0.25f*size.y, center.z-0.001f );
+
2505 ticks[1] = make_vec3( x, center.y+0.25f*size.y-0.05f*size.y, center.z-0.001f );
+
2506 addLine(ticks[0],ticks[1], make_RGBcolor(0.25,0.25,0.25),1,COORDINATES_WINDOW_NORMALIZED);
+
2507 }
+
2508
+
2509 }
+
2510
+
2511 //title
+
2512 addTextboxByCenter( title, make_vec3( center.x, center.y+0.4*size.y, center.z), make_SphericalCoord(0,0), font_color, colorbar_fontsize, "CantoraOne-Regular", COORDINATES_WINDOW_NORMALIZED );
+
2513
2514}
2515
-
2516void Visualizer::addCoordinateAxes(const helios::vec3 &origin, const helios::vec3 &length, const std::string &sign){
-
2517
-
2518
-
2519 float mult;
-
2520 if(sign == "both"){
-
2521 mult = 1.0;
-
2522 }else{
-
2523 mult = 0.0;
-
2524 }
-
2525
-
2526 float Lmag = length.magnitude();
-
2527
-
2528 // x axis
-
2529 addLine(make_vec3(mult*-1.0*length.x + origin.x, origin.y, origin.z), make_vec3(length.x + origin.x, origin.y, origin.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
-
2530
-
2531 if(length.x > 0){
-
2532 addTextboxByCenter("+ X", helios::make_vec3(1.2*length.x + origin.x, origin.y, origin.z), helios::make_SphericalCoord(0,0), helios::make_RGBcolor( 0.f, 0.f, 0.f ), uint(200*Lmag), "OpenSans-Regular", Visualizer::COORDINATES_CARTESIAN);
-
2533 }
+
+
2516void Visualizer::addCoordinateAxes(){
+
2517 addCoordinateAxes(helios::make_vec3(0,0,0), helios::make_vec3(1,1,1), "positive");
+
2518}
+
+
2519
+
+
2520void Visualizer::addCoordinateAxes(const helios::vec3 &origin, const helios::vec3 &length, const std::string &sign){
+
2521
+
2522
+
2523 float mult;
+
2524 if(sign == "both"){
+
2525 mult = 1.0;
+
2526 }else{
+
2527 mult = 0.0;
+
2528 }
+
2529
+
2530 float Lmag = length.magnitude();
+
2531
+
2532 // x axis
+
2533 addLine(make_vec3(mult*-1.0*length.x + origin.x, origin.y, origin.z), make_vec3(length.x + origin.x, origin.y, origin.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
2534
-
2535 // y axis
-
2536 addLine(make_vec3(origin.x, mult*-1.0*length.y+origin.y, origin.z), make_vec3(origin.x, length.y+origin.y, origin.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
-
2537
-
2538 if(length.y > 0){
-
2539 addTextboxByCenter("+ Y", helios::make_vec3( origin.x, 1.1*length.y+origin.y, origin.z), helios::make_SphericalCoord(0,0), helios::make_RGBcolor( 0.f, 0.f, 0.f ), uint(200*Lmag), "OpenSans-Regular", Visualizer::COORDINATES_CARTESIAN);
-
2540 }
+
2535 if(length.x > 0){
+
2536 addTextboxByCenter("+ X", helios::make_vec3(1.2*length.x + origin.x, origin.y, origin.z), helios::make_SphericalCoord(0,0), helios::make_RGBcolor( 0.f, 0.f, 0.f ), uint(200*Lmag), "OpenSans-Regular", Visualizer::COORDINATES_CARTESIAN);
+
2537 }
+
2538
+
2539 // y axis
+
2540 addLine(make_vec3(origin.x, mult*-1.0*length.y+origin.y, origin.z), make_vec3(origin.x, length.y+origin.y, origin.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
2541
-
2542 // z axis
-
2543 addLine(make_vec3(origin.x, origin.y, mult*-1*length.z+origin.z), make_vec3(origin.x, origin.y, length.z+origin.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
-
2544
-
2545 if(length.z > 0){
-
2546 addTextboxByCenter("+ Z", helios::make_vec3( origin.x, origin.y, length.z+origin.z), helios::make_SphericalCoord(0,0), helios::make_RGBcolor( 0.f, 0.f, 0.f ), uint(200*Lmag), "OpenSans-Regular", Visualizer::COORDINATES_CARTESIAN);
-
2547
-
2548 }
-
2549
-
2550
-
2551}
-
2552
+
2542 if(length.y > 0){
+
2543 addTextboxByCenter("+ Y", helios::make_vec3( origin.x, 1.1*length.y+origin.y, origin.z), helios::make_SphericalCoord(0,0), helios::make_RGBcolor( 0.f, 0.f, 0.f ), uint(200*Lmag), "OpenSans-Regular", Visualizer::COORDINATES_CARTESIAN);
+
2544 }
+
2545
+
2546 // z axis
+
2547 addLine(make_vec3(origin.x, origin.y, mult*-1*length.z+origin.z), make_vec3(origin.x, origin.y, length.z+origin.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
+
2548
+
2549 if(length.z > 0){
+
2550 addTextboxByCenter("+ Z", helios::make_vec3( origin.x, origin.y, length.z+origin.z), helios::make_SphericalCoord(0,0), helios::make_RGBcolor( 0.f, 0.f, 0.f ), uint(200*Lmag), "OpenSans-Regular", Visualizer::COORDINATES_CARTESIAN);
+
2551
+
2552 }
2553
-
2554void Visualizer::addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv){
-
2555
-
2556 helios::vec3 boxmin, boxmax;
-
2557 boxmin = make_vec3(center.x - 0.5*size.x, center.y - 0.5*size.y, center.z - 0.5*size.z);
-
2558 boxmax = make_vec3(center.x + 0.5*size.x, center.y + 0.5*size.y, center.z + 0.5*size.z);
+
2554
+
2555}
+
+
2556
+
2557
+
+
2558void Visualizer::addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv){
2559
-
2560 float spacing_x = size.x/subdiv.x;
-
2561 float spacing_y = size.y/subdiv.y;
-
2562 float spacing_z = size.z/subdiv.z;
+
2560 helios::vec3 boxmin, boxmax;
+
2561 boxmin = make_vec3(center.x - 0.5*size.x, center.y - 0.5*size.y, center.z - 0.5*size.z);
+
2562 boxmax = make_vec3(center.x + 0.5*size.x, center.y + 0.5*size.y, center.z + 0.5*size.z);
2563
-
2564 for(int i=0; i <= subdiv.x; i++)
-
2565 {
-
2566 for(int j=0; j <= subdiv.y; j++)
-
2567 {
-
2568 addLine(make_vec3(boxmin.x + i*spacing_x, boxmin.y + j*spacing_y, boxmin.z), make_vec3(boxmin.x + i*spacing_x, boxmin.y + j*spacing_y, boxmax.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
-
2569 }
-
2570 }
-
2571
-
2572 for(int i=0; i <= subdiv.z ; i++)
-
2573 {
-
2574 for(int j=0; j <= subdiv.y; j++)
-
2575 {
-
2576 addLine(make_vec3(boxmin.x , boxmin.y + j*spacing_y, boxmin.z + i*spacing_z), make_vec3(boxmax.x, boxmin.y + j*spacing_y, boxmin.z + i*spacing_z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
-
2577 }
-
2578 }
-
2579
-
2580 for(int i=0; i <= subdiv.x ; i++)
-
2581 {
-
2582 for(int j=0; j <= subdiv.z ; j++)
-
2583 {
-
2584 addLine(make_vec3(boxmin.x + i*spacing_x , boxmin.y, boxmin.z + j*spacing_z), make_vec3(boxmin.x + i*spacing_x, boxmax.y, boxmin.z + j*spacing_z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
-
2585 }
-
2586 }
-
2587
-
2588}
-
2589
-
2590void Visualizer::enableColorbar() {
-
2591 colorbar_flag = 2;
+
2564 float spacing_x = size.x/subdiv.x;
+
2565 float spacing_y = size.y/subdiv.y;
+
2566 float spacing_z = size.z/subdiv.z;
+
2567
+
2568 for(int i=0; i <= subdiv.x; i++)
+
2569 {
+
2570 for(int j=0; j <= subdiv.y; j++)
+
2571 {
+
2572 addLine(make_vec3(boxmin.x + i*spacing_x, boxmin.y + j*spacing_y, boxmin.z), make_vec3(boxmin.x + i*spacing_x, boxmin.y + j*spacing_y, boxmax.z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
+
2573 }
+
2574 }
+
2575
+
2576 for(int i=0; i <= subdiv.z ; i++)
+
2577 {
+
2578 for(int j=0; j <= subdiv.y; j++)
+
2579 {
+
2580 addLine(make_vec3(boxmin.x , boxmin.y + j*spacing_y, boxmin.z + i*spacing_z), make_vec3(boxmax.x, boxmin.y + j*spacing_y, boxmin.z + i*spacing_z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
+
2581 }
+
2582 }
+
2583
+
2584 for(int i=0; i <= subdiv.x ; i++)
+
2585 {
+
2586 for(int j=0; j <= subdiv.z ; j++)
+
2587 {
+
2588 addLine(make_vec3(boxmin.x + i*spacing_x , boxmin.y, boxmin.z + j*spacing_z), make_vec3(boxmin.x + i*spacing_x, boxmax.y, boxmin.z + j*spacing_z), RGB::black, 1, Visualizer::COORDINATES_CARTESIAN);
+
2589 }
+
2590 }
+
2591
2592}
+
2593
-
2594void Visualizer::disableColorbar() {
-
2595 colorbar_flag = 1;
+
+
2594void Visualizer::enableColorbar() {
+
2595 colorbar_flag = 2;
2596}
+
2597
-
2598void Visualizer::setColorbarPosition( vec3 position ){
-
2599 if( position.x < 0 || position.x>1 || position.y<0 || position.y>1 || position.z<-1 || position.z>1 ){
-
2600 helios_runtime_error("ERROR (Visualizer::setColorbarPosition): position is out of range. Coordinates must be: 0<x<1, 0<y<1, -1<z<1.");
-
2601 }
-
2602 colorbar_position = position;
-
2603}
-
2604
-
2605void Visualizer::setColorbarSize( vec2 size ){
-
2606 if( size.x < 0 || size.x>1 || size.y<0 || size.y>1 ){
-
2607 helios_runtime_error("ERROR (Visualizer::setColorbarSize): Size must be greater than 0 and less than the window size (i.e., 1).");
-
2608 }
-
2609 colorbar_size = size;
-
2610}
-
2611
-
2612void Visualizer::setColorbarRange( float cmin, float cmax ){
-
2613 if( message_flag && cmin>cmax ) {
-
2614 std::cout << "WARNING (Visualizer::setColorbarRange): Maximum colorbar value must be greater than minimum value...Ignoring command." << std::endl;
-
2615 }
-
2616 return;
-
2617 colorbar_min = cmin;
-
2618 colorbar_max = cmax;
-
2619}
-
2620
-
2621void Visualizer::setColorbarTicks(const std::vector<float> &ticks ){
-
2622
-
2623 //check that vector is not empty
-
2624 if( ticks.empty() ){
-
2625 helios_runtime_error("ERROR (Visualizer::setColorbarTicks): Colorbar ticks vector is empty.");
-
2626 }
-
2627
-
2628 //Check that ticks are monotonically increasing
-
2629 for( int i=1; i<ticks.size(); i++ ){
-
2630 if( ticks.at(i)<=ticks.at(i-1) ){
-
2631 helios_runtime_error("ERROR (Visualizer::setColorbarTicks): Colorbar ticks must be monotonically increasing.");
-
2632 }
-
2633 }
-
2634
-
2635 //Check that ticks are within the range of colorbar values
-
2636 for( int i=ticks.size()-1; i>=0; i-- ){
-
2637 if( ticks.at(i)<colorbar_min ){
-
2638 colorbar_min = ticks.at(i);
-
2639 }
-
2640 }
-
2641 for( float tick : ticks){
-
2642 if( tick>colorbar_max ){
-
2643 colorbar_max = tick;
-
2644 }
-
2645 }
-
2646
-
2647 colorbar_ticks = ticks;
-
2648}
-
2649
-
2650void Visualizer::setColorbarTitle( const char* title ){
-
2651 colorbar_title = title;
+
+
2598void Visualizer::disableColorbar() {
+
2599 colorbar_flag = 1;
+
2600}
+
+
2601
+
+
2602void Visualizer::setColorbarPosition( vec3 position ){
+
2603 if( position.x < 0 || position.x>1 || position.y<0 || position.y>1 || position.z<-1 || position.z>1 ){
+
2604 helios_runtime_error("ERROR (Visualizer::setColorbarPosition): position is out of range. Coordinates must be: 0<x<1, 0<y<1, -1<z<1.");
+
2605 }
+
2606 colorbar_position = position;
+
2607}
+
+
2608
+
+
2609void Visualizer::setColorbarSize( vec2 size ){
+
2610 if( size.x < 0 || size.x>1 || size.y<0 || size.y>1 ){
+
2611 helios_runtime_error("ERROR (Visualizer::setColorbarSize): Size must be greater than 0 and less than the window size (i.e., 1).");
+
2612 }
+
2613 colorbar_size = size;
+
2614}
+
+
2615
+
+
2616void Visualizer::setColorbarRange( float cmin, float cmax ){
+
2617 if( message_flag && cmin>cmax ) {
+
2618 std::cout << "WARNING (Visualizer::setColorbarRange): Maximum colorbar value must be greater than minimum value...Ignoring command." << std::endl;
+
2619 }
+
2620 return;
+
2621 colorbar_min = cmin;
+
2622 colorbar_max = cmax;
+
2623}
+
+
2624
+
+
2625void Visualizer::setColorbarTicks(const std::vector<float> &ticks ){
+
2626
+
2627 //check that vector is not empty
+
2628 if( ticks.empty() ){
+
2629 helios_runtime_error("ERROR (Visualizer::setColorbarTicks): Colorbar ticks vector is empty.");
+
2630 }
+
2631
+
2632 //Check that ticks are monotonically increasing
+
2633 for( int i=1; i<ticks.size(); i++ ){
+
2634 if( ticks.at(i)<=ticks.at(i-1) ){
+
2635 helios_runtime_error("ERROR (Visualizer::setColorbarTicks): Colorbar ticks must be monotonically increasing.");
+
2636 }
+
2637 }
+
2638
+
2639 //Check that ticks are within the range of colorbar values
+
2640 for( int i=ticks.size()-1; i>=0; i-- ){
+
2641 if( ticks.at(i)<colorbar_min ){
+
2642 colorbar_min = ticks.at(i);
+
2643 }
+
2644 }
+
2645 for( float tick : ticks){
+
2646 if( tick>colorbar_max ){
+
2647 colorbar_max = tick;
+
2648 }
+
2649 }
+
2650
+
2651 colorbar_ticks = ticks;
2652}
+
2653
-
2654void Visualizer::setColorbarFontSize( uint font_size ){
-
2655 if( font_size<=0 ){
-
2656 helios_runtime_error("ERROR (Visualizer::setColorbarFontSize): Font size must be greater than zero.");
-
2657 }
-
2658 colorbar_fontsize = font_size;
-
2659}
-
2660
-
2661void Visualizer::setColorbarFontColor( RGBcolor fontcolor ){
-
2662 colorbar_fontcolor = fontcolor;
+
+
2654void Visualizer::setColorbarTitle( const char* title ){
+
2655 colorbar_title = title;
+
2656}
+
+
2657
+
+
2658void Visualizer::setColorbarFontSize( uint font_size ){
+
2659 if( font_size<=0 ){
+
2660 helios_runtime_error("ERROR (Visualizer::setColorbarFontSize): Font size must be greater than zero.");
+
2661 }
+
2662 colorbar_fontsize = font_size;
2663}
+
2664
-
2665void Visualizer::setColormap( Ctable colormap_name ){
-
2666 if( colormap_name==COLORMAP_HOT ){
-
2667 colormap_current = colormap_hot;
-
2668 }else if( colormap_name==COLORMAP_COOL ){
-
2669 colormap_current = colormap_cool;
-
2670 }else if( colormap_name==COLORMAP_LAVA ){
-
2671 colormap_current = colormap_lava;
-
2672 }else if( colormap_name==COLORMAP_RAINBOW ){
-
2673 colormap_current = colormap_rainbow;
-
2674 }else if( colormap_name==COLORMAP_PARULA ){
-
2675 colormap_current = colormap_parula;
-
2676 }else if( colormap_name==COLORMAP_GRAY ){
-
2677 colormap_current = colormap_gray;
-
2678 }else if( colormap_name==COLORMAP_CUSTOM ){
-
2679 helios_runtime_error("ERROR (Visualizer::setColormap): Setting a custom colormap requires calling setColormap with additional arguments defining the colormap.");
-
2680 }else{
-
2681 helios_runtime_error("ERROR (Visualizer::setColormap): Invalid colormap.");
-
2682 }
-
2683}
-
2684
-
2685void Visualizer::setColormap(const std::vector<RGBcolor> &colors, const std::vector<float> &divisions ){
-
2686
-
2687 if( colors.size() != divisions.size() ){
-
2688 helios_runtime_error("ERROR (Visualizer::setColormap): The number of colors must be equal to the number of divisions.");
-
2689 }
+
+
2665void Visualizer::setColorbarFontColor( RGBcolor fontcolor ){
+
2666 colorbar_fontcolor = fontcolor;
+
2667}
+
+
2668
+
+
2669void Visualizer::setColormap( Ctable colormap_name ){
+
2670 if( colormap_name==COLORMAP_HOT ){
+
2671 colormap_current = colormap_hot;
+
2672 }else if( colormap_name==COLORMAP_COOL ){
+
2673 colormap_current = colormap_cool;
+
2674 }else if( colormap_name==COLORMAP_LAVA ){
+
2675 colormap_current = colormap_lava;
+
2676 }else if( colormap_name==COLORMAP_RAINBOW ){
+
2677 colormap_current = colormap_rainbow;
+
2678 }else if( colormap_name==COLORMAP_PARULA ){
+
2679 colormap_current = colormap_parula;
+
2680 }else if( colormap_name==COLORMAP_GRAY ){
+
2681 colormap_current = colormap_gray;
+
2682 }else if( colormap_name==COLORMAP_CUSTOM ){
+
2683 helios_runtime_error("ERROR (Visualizer::setColormap): Setting a custom colormap requires calling setColormap with additional arguments defining the colormap.");
+
2684 }else{
+
2685 helios_runtime_error("ERROR (Visualizer::setColormap): Invalid colormap.");
+
2686 }
+
2687}
+
+
2688
+
+
2689void Visualizer::setColormap(const std::vector<RGBcolor> &colors, const std::vector<float> &divisions ){
2690
-
2691 Colormap colormap_custom( colors, divisions, 100, 0, 1 );
-
2692
-
2693 colormap_current = colormap_custom;
+
2691 if( colors.size() != divisions.size() ){
+
2692 helios_runtime_error("ERROR (Visualizer::setColormap): The number of colors must be equal to the number of divisions.");
+
2693 }
2694
-
2695}
+
2695 Colormap colormap_custom( colors, divisions, 100, 0, 1 );
2696
-
2697Colormap Visualizer::getCurrentColormap() const{
-
2698 return colormap_current;
+
2697 colormap_current = colormap_custom;
+
2698
2699}
+
2700
-
2701void Visualizer::buildContextGeometry( helios::Context* context_ptr ){
-
2702 std::vector<uint> UUIDs = context_ptr->getAllUUIDs();
-
2703 buildContextGeometry(context_ptr, UUIDs);
-
2704}
-
2705
-
2706void Visualizer::buildContextGeometry(helios::Context* context_ptr, const std::vector<uint>& UUIDs ){
-
2707
-
2708 if( UUIDs.empty() ){
-
2709 std::cerr << "WARNING (Visualizer::buildContextGeometry): There is no Context geometry to build...exiting." << std::endl;
-
2710 return;
-
2711 }else if( !colorPrimitives_UUIDs.empty() || !colorPrimitives_objIDs.empty() ){
-
2712 std::cerr << "WARNING (Visualizer::buildContextGeometry): Existing Context geometry already exists in the Visualizer and will not be removed. You may have intended to call Visualizer::clearGeometry() first to clear old Context geometry." << std::endl;
-
2713 }
-
2714
-
2715
-
2716 context = context_ptr;
-
2717 contextGeomNeedsUpdate = true;
+
+
2701Colormap Visualizer::getCurrentColormap() const{
+
2702 return colormap_current;
+
2703}
+
+
2704
+
+
2705void Visualizer::buildContextGeometry( helios::Context* context_ptr ){
+
2706 std::vector<uint> UUIDs = context_ptr->getAllUUIDs();
+
2707 buildContextGeometry(context_ptr, UUIDs);
+
2708}
+
+
2709
+
+
2710void Visualizer::buildContextGeometry(helios::Context* context_ptr, const std::vector<uint>& UUIDs ){
+
2711
+
2712 if( UUIDs.empty() ){
+
2713 std::cerr << "WARNING (Visualizer::buildContextGeometry): There is no Context geometry to build...exiting." << std::endl;
+
2714 return;
+
2715 }else if( !colorPrimitives_UUIDs.empty() || !colorPrimitives_objIDs.empty() ){
+
2716 std::cerr << "WARNING (Visualizer::buildContextGeometry): Existing Context geometry already exists in the Visualizer and will not be removed. You may have intended to call Visualizer::clearGeometry() first to clear old Context geometry." << std::endl;
+
2717 }
2718
-
2719 contextPrimitiveIDs.insert(contextPrimitiveIDs.begin(), UUIDs.begin(), UUIDs.end() );
-
2720
-
2721 //Set the view to fit window
-
2722 if( camera_lookat_center.x==0 && camera_lookat_center.y==0 && camera_lookat_center.z==0 ){ //default center
-
2723 if( camera_eye_location.x<1e-4 && camera_eye_location.y<1e-4 && camera_eye_location.z==2.f ){ //default eye position
+
2719
+
2720 context = context_ptr;
+
2721 contextGeomNeedsUpdate = true;
+
2722
+
2723 contextPrimitiveIDs.insert(contextPrimitiveIDs.begin(), UUIDs.begin(), UUIDs.end() );
2724
-
2725 vec3 center_sph;
-
2726 vec2 xbounds, ybounds, zbounds;
-
2727 float radius;
-
2728 context->getDomainBoundingSphere( UUIDs, center_sph, radius );
-
2729 context->getDomainBoundingBox( UUIDs, xbounds, ybounds, zbounds );
-
2730 camera_lookat_center = make_vec3( 0.5*(xbounds.x+xbounds.y), 0.5*(ybounds.x+ybounds.y), 0.5*(zbounds.x+zbounds.y) );
-
2731 camera_eye_location = camera_lookat_center + sphere2cart( make_SphericalCoord(2.f*radius,20.f*M_PI/180.f,0) );
-
2732
-
2733 }
-
2734 }
-
2735
-
2736}
-
2737
-
2738void Visualizer::buildContextGeometry_private() {
+
2725 //Set the view to fit window
+
2726 if( camera_lookat_center.x==0 && camera_lookat_center.y==0 && camera_lookat_center.z==0 ){ //default center
+
2727 if( camera_eye_location.x<1e-4 && camera_eye_location.y<1e-4 && camera_eye_location.z==2.f ){ //default eye position
+
2728
+
2729 vec3 center_sph;
+
2730 vec2 xbounds, ybounds, zbounds;
+
2731 float radius;
+
2732 context->getDomainBoundingSphere( UUIDs, center_sph, radius );
+
2733 context->getDomainBoundingBox( UUIDs, xbounds, ybounds, zbounds );
+
2734 camera_lookat_center = make_vec3( 0.5*(xbounds.x+xbounds.y), 0.5*(ybounds.x+ybounds.y), 0.5*(zbounds.x+zbounds.y) );
+
2735 camera_eye_location = camera_lookat_center + sphere2cart( make_SphericalCoord(2.f*radius,20.f*M_PI/180.f,0) );
+
2736
+
2737 }
+
2738 }
2739
-
2740 contextGeomNeedsUpdate = false;
+
2740}
+
2741
-
2742 if( !colorPrimitivesByData.empty() ){
+
2742void Visualizer::buildContextGeometry_private() {
2743
-
2744 if( colorPrimitives_UUIDs.empty() ) { //load all primitives
-
2745 for (uint UUID: contextPrimitiveIDs) {
-
2746 if (context->doesPrimitiveExist(UUID)) {
-
2747 colorPrimitives_UUIDs[UUID] = UUID;
-
2748 }
-
2749 }
-
2750 }else { //double check that primitives exist
-
2751 for (uint UUID: contextPrimitiveIDs) {
-
2752 if ( !context->doesPrimitiveExist(UUID)) {
-
2753 auto it = colorPrimitives_UUIDs.find(UUID);
-
2754 colorPrimitives_UUIDs.erase( it );
-
2755 }
-
2756 }
-
2757 }
-
2758
-
2759 }else if( !colorPrimitivesByObjectData.empty() ) {
-
2760
-
2761 if( colorPrimitives_objIDs.empty() ) { //load all primitives
-
2762 std::vector<uint> ObjIDs = context->getAllObjectIDs();
-
2763 for( uint objID: ObjIDs ) {
-
2764 if( context->doesObjectExist(objID) ) {
-
2765 std::vector<uint> UUIDs = context->getObjectPointer(objID)->getPrimitiveUUIDs();
-
2766 for( uint UUID : UUIDs ) {
-
2767 if (context->doesPrimitiveExist(UUID)) {
-
2768 colorPrimitives_UUIDs[UUID] = UUID;
-
2769 }
-
2770 }
-
2771 }
-
2772 }
-
2773 }else { //load primitives specified by user
-
2774 for ( const auto &objID: colorPrimitives_objIDs ) {
-
2775 if( context->doesObjectExist( objID.first )) {
-
2776 std::vector<uint> UUIDs = context->getObjectPointer(objID.first)->getPrimitiveUUIDs();
-
2777 for (uint UUID: UUIDs) {
-
2778 if (context->doesPrimitiveExist(UUID)) {
-
2779 colorPrimitives_UUIDs[UUID] = UUID;
-
2780 }
-
2781 }
-
2782 }
-
2783 }
-
2784 }
-
2785
-
2786 }
-
2787
-
2788 if( !colorPrimitives_UUIDs.empty() && colorbar_flag == 0) {
-
2789 enableColorbar();
+
2744 contextGeomNeedsUpdate = false;
+
2745
+
2746 if( !colorPrimitivesByData.empty() ){
+
2747
+
2748 if( colorPrimitives_UUIDs.empty() ) { //load all primitives
+
2749 for (uint UUID: contextPrimitiveIDs) {
+
2750 if (context->doesPrimitiveExist(UUID)) {
+
2751 colorPrimitives_UUIDs[UUID] = UUID;
+
2752 }
+
2753 }
+
2754 }else { //double check that primitives exist
+
2755 for (uint UUID: contextPrimitiveIDs) {
+
2756 if ( !context->doesPrimitiveExist(UUID)) {
+
2757 auto it = colorPrimitives_UUIDs.find(UUID);
+
2758 colorPrimitives_UUIDs.erase( it );
+
2759 }
+
2760 }
+
2761 }
+
2762
+
2763 }else if( !colorPrimitivesByObjectData.empty() ) {
+
2764
+
2765 if( colorPrimitives_objIDs.empty() ) { //load all primitives
+
2766 std::vector<uint> ObjIDs = context->getAllObjectIDs();
+
2767 for( uint objID: ObjIDs ) {
+
2768 if( context->doesObjectExist(objID) ) {
+
2769 std::vector<uint> UUIDs = context->getObjectPointer(objID)->getPrimitiveUUIDs();
+
2770 for( uint UUID : UUIDs ) {
+
2771 if (context->doesPrimitiveExist(UUID)) {
+
2772 colorPrimitives_UUIDs[UUID] = UUID;
+
2773 }
+
2774 }
+
2775 }
+
2776 }
+
2777 }else { //load primitives specified by user
+
2778 for ( const auto &objID: colorPrimitives_objIDs ) {
+
2779 if( context->doesObjectExist( objID.first )) {
+
2780 std::vector<uint> UUIDs = context->getObjectPointer(objID.first)->getPrimitiveUUIDs();
+
2781 for (uint UUID: UUIDs) {
+
2782 if (context->doesPrimitiveExist(UUID)) {
+
2783 colorPrimitives_UUIDs[UUID] = UUID;
+
2784 }
+
2785 }
+
2786 }
+
2787 }
+
2788 }
+
2789
2790 }
2791
-
2792 //------ Colormap ------//
-
2793
-
2794 uint psize = contextPrimitiveIDs.size();
-
2795 if( message_flag ){
-
2796 if( psize>0 ){
-
2797 if( psize>=1e3 && psize<1e6 ){
-
2798 std::cout << "Adding " << psize/1e3 << "K Context primitives to visualizer...." << std::flush;
-
2799 }else if( psize>=1e6 ){
-
2800 std::cout << "Adding " << psize/1e6 << "M Context primitives to visualizer...." << std::flush;
-
2801 }else{
-
2802 std::cout << "Adding " << psize << " Context primitives to visualizer...." << std::flush;
-
2803 }
-
2804 }else{
-
2805 std::cout << "WARNING (Visualizer::buildContextGeometry): No primitives were found in the Context..." << std::endl;
-
2806 }
-
2807 }
-
2808
-
2809 //do a pre-sort of primitive UUIDs by texture
-
2810 std::map<std::string,std::vector<uint> > UUID_texture;
-
2811 for( uint p=0; p<psize; p++ ){
+
2792 if( !colorPrimitives_UUIDs.empty() && colorbar_flag == 0) {
+
2793 enableColorbar();
+
2794 }
+
2795
+
2796 //------ Colormap ------//
+
2797
+
2798 uint psize = contextPrimitiveIDs.size();
+
2799 if( message_flag ){
+
2800 if( psize>0 ){
+
2801 if( psize>=1e3 && psize<1e6 ){
+
2802 std::cout << "Adding " << psize/1e3 << "K Context primitives to visualizer...." << std::flush;
+
2803 }else if( psize>=1e6 ){
+
2804 std::cout << "Adding " << psize/1e6 << "M Context primitives to visualizer...." << std::flush;
+
2805 }else{
+
2806 std::cout << "Adding " << psize << " Context primitives to visualizer...." << std::flush;
+
2807 }
+
2808 }else{
+
2809 std::cout << "WARNING (Visualizer::buildContextGeometry): No primitives were found in the Context..." << std::endl;
+
2810 }
+
2811 }
2812
-
2813 uint UUID = contextPrimitiveIDs.at(p);
-
2814
-
2815 if( context->doesPrimitiveExist(UUID) ) {
+
2813 //do a pre-sort of primitive UUIDs by texture
+
2814 std::map<std::string,std::vector<uint> > UUID_texture;
+
2815 for( uint p=0; p<psize; p++ ){
2816
-
2817 std::string texture_file = context->getPrimitiveTextureFile(UUID);
+
2817 uint UUID = contextPrimitiveIDs.at(p);
2818
-
2819 UUID_texture[texture_file].push_back(UUID);
+
2819 if( context->doesPrimitiveExist(UUID) ) {
2820
-
2821 }
+
2821 std::string texture_file = context->getPrimitiveTextureFile(UUID);
2822
-
2823 }
+
2823 UUID_texture[texture_file].push_back(UUID);
2824
-
2825 //figure out colorbar range
+
2825 }
2826
-
2827 colormap_current.setRange( colorbar_min, colorbar_max );
-
2828 if( colorbar_min==0 && colorbar_max==0 ){//range was not set by user, use full range of values
-
2829
-
2830 colorbar_min = INFINITY;
-
2831 colorbar_max = -INFINITY;
-
2832
-
2833 for(auto iter = UUID_texture.begin(); iter != UUID_texture.end(); ++iter){
-
2834
-
2835 std::vector<uint> UUIDs = iter->second;
+
2827 }
+
2828
+
2829 //figure out colorbar range
+
2830
+
2831 colormap_current.setRange( colorbar_min, colorbar_max );
+
2832 if( colorbar_min==0 && colorbar_max==0 ){//range was not set by user, use full range of values
+
2833
+
2834 colorbar_min = INFINITY;
+
2835 colorbar_max = -INFINITY;
2836
-
2837 for( size_t u=0; u<UUIDs.size(); u++ ){
+
2837 for(auto iter = UUID_texture.begin(); iter != UUID_texture.end(); ++iter){
2838
-
2839 uint UUID = UUIDs.at(u);
+
2839 std::vector<uint> UUIDs = iter->second;
2840
-
2841 float colorValue=-9999;
-
2842 if( !colorPrimitivesByData.empty() ){
-
2843 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
-
2844 if( context->doesPrimitiveDataExist( UUID, colorPrimitivesByData.c_str() ) ){
-
2845 HeliosDataType type = context->getPrimitiveDataType( UUID, colorPrimitivesByData.c_str() );
-
2846 if( type==HELIOS_TYPE_FLOAT ){
-
2847 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), colorValue );
-
2848 }else if( type==HELIOS_TYPE_INT ){
-
2849 int cv;
-
2850 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
-
2851 colorValue = float(cv);
-
2852 }else if( type==HELIOS_TYPE_UINT ){
-
2853 uint cv;
+
2841 for( size_t u=0; u<UUIDs.size(); u++ ){
+
2842
+
2843 uint UUID = UUIDs.at(u);
+
2844
+
2845 float colorValue=-9999;
+
2846 if( !colorPrimitivesByData.empty() ){
+
2847 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
+
2848 if( context->doesPrimitiveDataExist( UUID, colorPrimitivesByData.c_str() ) ){
+
2849 HeliosDataType type = context->getPrimitiveDataType( UUID, colorPrimitivesByData.c_str() );
+
2850 if( type==HELIOS_TYPE_FLOAT ){
+
2851 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), colorValue );
+
2852 }else if( type==HELIOS_TYPE_INT ){
+
2853 int cv;
2854 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
2855 colorValue = float(cv);
-
2856 }else if( type==HELIOS_TYPE_DOUBLE ){
-
2857 double cv;
+
2856 }else if( type==HELIOS_TYPE_UINT ){
+
2857 uint cv;
2858 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
2859 colorValue = float(cv);
-
2860 }else{
-
2861 colorValue = 0;
-
2862 }
-
2863 }else{
-
2864 colorValue = 0;
-
2865 }
-
2866 }
-
2867 }else if( !colorPrimitivesByObjectData.empty() ){
-
2868 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
-
2869 uint ObjID = context->getPrimitiveParentObjectID(UUID);
-
2870 if( ObjID==0 ){
-
2871 colorValue = 0;
-
2872 }else if( context->doesObjectDataExist( ObjID, colorPrimitivesByObjectData.c_str() ) ){
-
2873 HeliosDataType type = context->getObjectDataType( ObjID, colorPrimitivesByObjectData.c_str() );
-
2874 if( type==HELIOS_TYPE_FLOAT ){
-
2875 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), colorValue );
-
2876 }else if( type==HELIOS_TYPE_INT ){
-
2877 int cv;
-
2878 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
-
2879 colorValue = float(cv);
-
2880 }else if( type==HELIOS_TYPE_UINT ){
-
2881 uint cv;
+
2860 }else if( type==HELIOS_TYPE_DOUBLE ){
+
2861 double cv;
+
2862 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
+
2863 colorValue = float(cv);
+
2864 }else{
+
2865 colorValue = 0;
+
2866 }
+
2867 }else{
+
2868 colorValue = 0;
+
2869 }
+
2870 }
+
2871 }else if( !colorPrimitivesByObjectData.empty() ){
+
2872 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
+
2873 uint ObjID = context->getPrimitiveParentObjectID(UUID);
+
2874 if( ObjID==0 ){
+
2875 colorValue = 0;
+
2876 }else if( context->doesObjectDataExist( ObjID, colorPrimitivesByObjectData.c_str() ) ){
+
2877 HeliosDataType type = context->getObjectDataType( ObjID, colorPrimitivesByObjectData.c_str() );
+
2878 if( type==HELIOS_TYPE_FLOAT ){
+
2879 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), colorValue );
+
2880 }else if( type==HELIOS_TYPE_INT ){
+
2881 int cv;
2882 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
2883 colorValue = float(cv);
-
2884 }else if( type==HELIOS_TYPE_DOUBLE ){
-
2885 double cv;
+
2884 }else if( type==HELIOS_TYPE_UINT ){
+
2885 uint cv;
2886 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
2887 colorValue = float(cv);
-
2888 }else{
-
2889 colorValue = 0;
-
2890 }
-
2891 }else{
-
2892 colorValue = 0;
-
2893 }
-
2894 }
-
2895 }
-
2896
-
2897 if( colorValue!=colorValue || colorValue==INFINITY ) {//check for NaN or infinity
-
2898 colorValue = 0;
+
2888 }else if( type==HELIOS_TYPE_DOUBLE ){
+
2889 double cv;
+
2890 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
+
2891 colorValue = float(cv);
+
2892 }else{
+
2893 colorValue = 0;
+
2894 }
+
2895 }else{
+
2896 colorValue = 0;
+
2897 }
+
2898 }
2899 }
2900
-
2901 if( colorValue!=-9999 ){
-
2902 if( colorValue<colorbar_min ){
-
2903 colorbar_min = colorValue;;
-
2904 }
-
2905 if( colorValue>colorbar_max ){
-
2906 colorbar_max = colorValue;;
-
2907 }
-
2908 }
-
2909
-
2910 }
-
2911 }
-
2912
-
2913 if( colorbar_min!=INFINITY && colorbar_max!=-INFINITY ){
-
2914 colormap_current.setRange( colorbar_min, colorbar_max );
+
2901 if( colorValue!=colorValue || colorValue==INFINITY ) {//check for NaN or infinity
+
2902 colorValue = 0;
+
2903 }
+
2904
+
2905 if( colorValue!=-9999 ){
+
2906 if( colorValue<colorbar_min ){
+
2907 colorbar_min = colorValue;;
+
2908 }
+
2909 if( colorValue>colorbar_max ){
+
2910 colorbar_max = colorValue;;
+
2911 }
+
2912 }
+
2913
+
2914 }
2915 }
-
2916 }
-
2917
-
2918 if( !colorPrimitivesByData.empty() ) {
-
2919 assert(colorbar_min <= colorbar_max);
+
2916
+
2917 if( colorbar_min!=INFINITY && colorbar_max!=-INFINITY ){
+
2918 colormap_current.setRange( colorbar_min, colorbar_max );
+
2919 }
2920 }
2921
-
2922 //------- Simulation Geometry -------//
-
2923
-
2924 //add primitives
+
2922 if( !colorPrimitivesByData.empty() ) {
+
2923 assert(colorbar_min <= colorbar_max);
+
2924 }
2925
-
2926 for(auto iter = UUID_texture.begin(); iter != UUID_texture.end(); ++iter){
+
2926 //------- Simulation Geometry -------//
2927
-
2928 std::vector<uint> UUIDs = iter->second;
+
2928 //add primitives
2929
-
2930 for( size_t u=0; u<UUIDs.size(); u++ ){
+
2930 for(auto iter = UUID_texture.begin(); iter != UUID_texture.end(); ++iter){
2931
-
2932 uint UUID = UUIDs.at(u);
+
2932 std::vector<uint> UUIDs = iter->second;
2933
-
2934 if( !context->doesPrimitiveExist(UUID) ){
-
2935 std::cerr << "WARNING (Visualizer::buildContextGeometry): UUID vector contains ID(s) that do not exist in the Context...they will be ignored." << std::endl;
-
2936 continue;
-
2937 }
-
2938
-
2939 helios::PrimitiveType ptype = context->getPrimitiveType(UUID);
-
2940
-
2941 std::vector<vec3> verts = context->getPrimitiveVertices(UUID);
-
2942 std::string texture_file = context->getPrimitiveTextureFile(UUID);
-
2943
-
2944 RGBAcolor color;
-
2945 float colorValue;
-
2946 if( !colorPrimitivesByData.empty() ){
-
2947 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
-
2948 if( context->doesPrimitiveDataExist( UUID, colorPrimitivesByData.c_str() ) ){
-
2949 HeliosDataType type = context->getPrimitiveDataType( UUID, colorPrimitivesByData.c_str() );
-
2950 if( type==HELIOS_TYPE_FLOAT ){
-
2951 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), colorValue );
-
2952 }else if( type==HELIOS_TYPE_INT ){
-
2953 int cv;
-
2954 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
-
2955 colorValue = float(cv);
-
2956 }else if( type==HELIOS_TYPE_UINT ){
-
2957 uint cv;
+
2934 for( size_t u=0; u<UUIDs.size(); u++ ){
+
2935
+
2936 uint UUID = UUIDs.at(u);
+
2937
+
2938 if( !context->doesPrimitiveExist(UUID) ){
+
2939 std::cerr << "WARNING (Visualizer::buildContextGeometry): UUID vector contains ID(s) that do not exist in the Context...they will be ignored." << std::endl;
+
2940 continue;
+
2941 }
+
2942
+
2943 helios::PrimitiveType ptype = context->getPrimitiveType(UUID);
+
2944
+
2945 std::vector<vec3> verts = context->getPrimitiveVertices(UUID);
+
2946 std::string texture_file = context->getPrimitiveTextureFile(UUID);
+
2947
+
2948 RGBAcolor color;
+
2949 float colorValue;
+
2950 if( !colorPrimitivesByData.empty() ){
+
2951 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
+
2952 if( context->doesPrimitiveDataExist( UUID, colorPrimitivesByData.c_str() ) ){
+
2953 HeliosDataType type = context->getPrimitiveDataType( UUID, colorPrimitivesByData.c_str() );
+
2954 if( type==HELIOS_TYPE_FLOAT ){
+
2955 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), colorValue );
+
2956 }else if( type==HELIOS_TYPE_INT ){
+
2957 int cv;
2958 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
2959 colorValue = float(cv);
-
2960 }else if( type==HELIOS_TYPE_DOUBLE ){
-
2961 double cv;
+
2960 }else if( type==HELIOS_TYPE_UINT ){
+
2961 uint cv;
2962 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
2963 colorValue = float(cv);
-
2964 }else{
-
2965 colorValue = 0;
-
2966 }
-
2967
-
2968 }else{
-
2969 colorValue = 0;
-
2970 }
+
2964 }else if( type==HELIOS_TYPE_DOUBLE ){
+
2965 double cv;
+
2966 context->getPrimitiveData( UUID, colorPrimitivesByData.c_str(), cv );
+
2967 colorValue = float(cv);
+
2968 }else{
+
2969 colorValue = 0;
+
2970 }
2971
-
2972 if( colorValue!=colorValue || colorValue==INFINITY ) {//check for NaN or infinity
+
2972 }else{
2973 colorValue = 0;
2974 }
2975
-
2976 color = make_RGBAcolor(colormap_current.query( colorValue ),1);
-
2977 }else{
-
2978 color = context->getPrimitiveColorRGBA(UUID);
-
2979 }
-
2980 }else if( !colorPrimitivesByObjectData.empty() ){
-
2981 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
-
2982 uint ObjID = context->getPrimitiveParentObjectID(UUID);
-
2983 if( ObjID==0 ){
-
2984 colorValue = 0;
-
2985 }else if( context->doesObjectDataExist( ObjID, colorPrimitivesByObjectData.c_str() ) ){
-
2986 HeliosDataType type = context->getObjectDataType( ObjID, colorPrimitivesByObjectData.c_str() );
-
2987 if( type==HELIOS_TYPE_FLOAT ){
-
2988 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), colorValue );
-
2989 }else if( type==HELIOS_TYPE_INT ){
-
2990 int cv;
-
2991 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
-
2992 colorValue = float(cv);
-
2993 }else if( type==HELIOS_TYPE_UINT ){
-
2994 uint cv;
+
2976 if( colorValue!=colorValue || colorValue==INFINITY ) {//check for NaN or infinity
+
2977 colorValue = 0;
+
2978 }
+
2979
+
2980 color = make_RGBAcolor(colormap_current.query( colorValue ),1);
+
2981 }else{
+
2982 color = context->getPrimitiveColorRGBA(UUID);
+
2983 }
+
2984 }else if( !colorPrimitivesByObjectData.empty() ){
+
2985 if( colorPrimitives_UUIDs.find(UUID) != colorPrimitives_UUIDs.end() ){
+
2986 uint ObjID = context->getPrimitiveParentObjectID(UUID);
+
2987 if( ObjID==0 ){
+
2988 colorValue = 0;
+
2989 }else if( context->doesObjectDataExist( ObjID, colorPrimitivesByObjectData.c_str() ) ){
+
2990 HeliosDataType type = context->getObjectDataType( ObjID, colorPrimitivesByObjectData.c_str() );
+
2991 if( type==HELIOS_TYPE_FLOAT ){
+
2992 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), colorValue );
+
2993 }else if( type==HELIOS_TYPE_INT ){
+
2994 int cv;
2995 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
2996 colorValue = float(cv);
-
2997 }else if( type==HELIOS_TYPE_DOUBLE ){
-
2998 double cv;
+
2997 }else if( type==HELIOS_TYPE_UINT ){
+
2998 uint cv;
2999 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
3000 colorValue = float(cv);
-
3001 }else{
-
3002 colorValue = 0;
-
3003 }
-
3004 }else{
-
3005 colorValue = 0;
-
3006 }
-
3007
-
3008 if( colorValue!=colorValue || colorValue==INFINITY ) {//check for NaN or infinity
+
3001 }else if( type==HELIOS_TYPE_DOUBLE ){
+
3002 double cv;
+
3003 context->getObjectData( ObjID, colorPrimitivesByObjectData.c_str(), cv );
+
3004 colorValue = float(cv);
+
3005 }else{
+
3006 colorValue = 0;
+
3007 }
+
3008 }else{
3009 colorValue = 0;
3010 }
3011
-
3012 color = make_RGBAcolor(colormap_current.query( colorValue ),1);
-
3013 }else{
-
3014 color = context->getPrimitiveColorRGBA(UUID);
-
3015 }
-
3016 }else{
-
3017 color = context->getPrimitiveColorRGBA(UUID);
-
3018 }
-
3019
-
3020 if( ptype == helios::PRIMITIVE_TYPE_PATCH ){
-
3021
-
3022 if( texture_file.empty() ){//Patch does not have an associated texture or we are ignoring texture
-
3023 addRectangleByVertices( verts, color, COORDINATES_CARTESIAN );
-
3024 }else{ //Patch has a texture
+
3012 if( colorValue!=colorValue || colorValue==INFINITY ) {//check for NaN or infinity
+
3013 colorValue = 0;
+
3014 }
+
3015
+
3016 color = make_RGBAcolor(colormap_current.query( colorValue ),1);
+
3017 }else{
+
3018 color = context->getPrimitiveColorRGBA(UUID);
+
3019 }
+
3020 }else{
+
3021 color = context->getPrimitiveColorRGBA(UUID);
+
3022 }
+
3023
+
3024 if( ptype == helios::PRIMITIVE_TYPE_PATCH ){
3025
-
3026 std::vector<vec2> uvs = context->getPrimitiveTextureUV(UUID);
-
3027
-
3028 if( colorPrimitives_UUIDs.find(UUID) == colorPrimitives_UUIDs.end() || colorPrimitives_UUIDs.empty() ){//coloring primitive based on texture
-
3029 if( uvs.size()==4 ){//custom (u,v) coordinates
-
3030 if( context->isPrimitiveTextureColorOverridden(UUID) ){
-
3031 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), uvs, COORDINATES_CARTESIAN );
-
3032 }else{
-
3033 addRectangleByVertices( verts, texture_file.c_str(), uvs, COORDINATES_CARTESIAN );
-
3034 }
-
3035 }else{//default (u,v) coordinates
-
3036 if( context->isPrimitiveTextureColorOverridden(UUID) ){
-
3037 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3038 }else{
-
3039 addRectangleByVertices( verts, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3040 }
-
3041 }
-
3042 }else{//coloring primitive based on primitive data
-
3043 if( uvs.size()==4 ){//custom (u,v) coordinates
-
3044 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), uvs, COORDINATES_CARTESIAN );
-
3045 }else{//default (u,v) coordinates
-
3046 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3047 }
-
3048 }
-
3049 }
-
3050
-
3051 }else if( ptype == helios::PRIMITIVE_TYPE_TRIANGLE ){
-
3052
-
3053 if( texture_file.empty() ){//Triangle does not have an associated texture or we are ignoring texture
-
3054 addTriangle( verts.at(0), verts.at(1), verts.at(2), color, COORDINATES_CARTESIAN );
-
3055 }else{ //Triangle has a texture
+
3026 if( texture_file.empty() ){//Patch does not have an associated texture or we are ignoring texture
+
3027 addRectangleByVertices( verts, color, COORDINATES_CARTESIAN );
+
3028 }else{ //Patch has a texture
+
3029
+
3030 std::vector<vec2> uvs = context->getPrimitiveTextureUV(UUID);
+
3031
+
3032 if( colorPrimitives_UUIDs.find(UUID) == colorPrimitives_UUIDs.end() || colorPrimitives_UUIDs.empty() ){//coloring primitive based on texture
+
3033 if( uvs.size()==4 ){//custom (u,v) coordinates
+
3034 if( context->isPrimitiveTextureColorOverridden(UUID) ){
+
3035 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), uvs, COORDINATES_CARTESIAN );
+
3036 }else{
+
3037 addRectangleByVertices( verts, texture_file.c_str(), uvs, COORDINATES_CARTESIAN );
+
3038 }
+
3039 }else{//default (u,v) coordinates
+
3040 if( context->isPrimitiveTextureColorOverridden(UUID) ){
+
3041 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3042 }else{
+
3043 addRectangleByVertices( verts, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3044 }
+
3045 }
+
3046 }else{//coloring primitive based on primitive data
+
3047 if( uvs.size()==4 ){//custom (u,v) coordinates
+
3048 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), uvs, COORDINATES_CARTESIAN );
+
3049 }else{//default (u,v) coordinates
+
3050 addRectangleByVertices( verts, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3051 }
+
3052 }
+
3053 }
+
3054
+
3055 }else if( ptype == helios::PRIMITIVE_TYPE_TRIANGLE ){
3056
-
3057 std::vector<vec2> uvs = context->getPrimitiveTextureUV(UUID);
-
3058
-
3059 if( colorPrimitives_UUIDs.find(UUID) == colorPrimitives_UUIDs.end() || colorPrimitives_UUIDs.size()==0 ){//coloring primitive based on texture
-
3060 if( context->isPrimitiveTextureColorOverridden(UUID) ){
-
3061 addTriangle( verts.at(0), verts.at(1), verts.at(2), texture_file.c_str(), uvs.at(0), uvs.at(1), uvs.at(2), make_RGBAcolor(color.r,color.g,color.b,1), COORDINATES_CARTESIAN );
-
3062 }else{
-
3063 addTriangle( verts.at(0), verts.at(1), verts.at(2), texture_file.c_str(), uvs.at(0), uvs.at(1), uvs.at(2), COORDINATES_CARTESIAN );
-
3064 }
-
3065 }else{//coloring primitive based on primitive data
-
3066 addTriangle( verts.at(0), verts.at(1), verts.at(2), texture_file.c_str(), uvs.at(0), uvs.at(1), uvs.at(2), make_RGBAcolor(color.r,color.g,color.b,1), COORDINATES_CARTESIAN );
-
3067 }
-
3068
-
3069 }
-
3070
-
3071 }else if( ptype == helios::PRIMITIVE_TYPE_VOXEL ){
+
3057 if( texture_file.empty() ){//Triangle does not have an associated texture or we are ignoring texture
+
3058 addTriangle( verts.at(0), verts.at(1), verts.at(2), color, COORDINATES_CARTESIAN );
+
3059 }else{ //Triangle has a texture
+
3060
+
3061 std::vector<vec2> uvs = context->getPrimitiveTextureUV(UUID);
+
3062
+
3063 if( colorPrimitives_UUIDs.find(UUID) == colorPrimitives_UUIDs.end() || colorPrimitives_UUIDs.size()==0 ){//coloring primitive based on texture
+
3064 if( context->isPrimitiveTextureColorOverridden(UUID) ){
+
3065 addTriangle( verts.at(0), verts.at(1), verts.at(2), texture_file.c_str(), uvs.at(0), uvs.at(1), uvs.at(2), make_RGBAcolor(color.r,color.g,color.b,1), COORDINATES_CARTESIAN );
+
3066 }else{
+
3067 addTriangle( verts.at(0), verts.at(1), verts.at(2), texture_file.c_str(), uvs.at(0), uvs.at(1), uvs.at(2), COORDINATES_CARTESIAN );
+
3068 }
+
3069 }else{//coloring primitive based on primitive data
+
3070 addTriangle( verts.at(0), verts.at(1), verts.at(2), texture_file.c_str(), uvs.at(0), uvs.at(1), uvs.at(2), make_RGBAcolor(color.r,color.g,color.b,1), COORDINATES_CARTESIAN );
+
3071 }
3072
-
3073 std::vector<vec3> v_vertices = context->getPrimitiveVertices(UUID);
+
3073 }
3074
-
3075 std::vector<vec3> bottom_vertices, top_vertices, mx_vertices, px_vertices, my_vertices, py_vertices;
-
3076 bottom_vertices.resize(4);
-
3077 top_vertices.resize(4);
-
3078 mx_vertices.resize(4);
-
3079 px_vertices.resize(4);
-
3080 my_vertices.resize(4);
-
3081 py_vertices.resize(4);
-
3082
-
3083 //bottom
-
3084 bottom_vertices.at(0) = v_vertices.at(0);
-
3085 bottom_vertices.at(1) = v_vertices.at(1);
-
3086 bottom_vertices.at(2) = v_vertices.at(2);
-
3087 bottom_vertices.at(3) = v_vertices.at(3);
-
3088
-
3089 //top
-
3090 top_vertices.at(0) = v_vertices.at(4);
-
3091 top_vertices.at(1) = v_vertices.at(5);
-
3092 top_vertices.at(2) = v_vertices.at(6);
-
3093 top_vertices.at(3) = v_vertices.at(7);
-
3094
-
3095 //-x
-
3096 mx_vertices.at(0) = v_vertices.at(0);
-
3097 mx_vertices.at(1) = v_vertices.at(3);
-
3098 mx_vertices.at(2) = v_vertices.at(7);
-
3099 mx_vertices.at(3) = v_vertices.at(4);
-
3100
-
3101 //+x
-
3102 px_vertices.at(0) = v_vertices.at(1);
-
3103 px_vertices.at(1) = v_vertices.at(2);
-
3104 px_vertices.at(2) = v_vertices.at(6);
-
3105 px_vertices.at(3) = v_vertices.at(5);
-
3106
-
3107 //-y
-
3108 my_vertices.at(0) = v_vertices.at(0);
-
3109 my_vertices.at(1) = v_vertices.at(1);
-
3110 my_vertices.at(2) = v_vertices.at(5);
-
3111 my_vertices.at(3) = v_vertices.at(4);
-
3112
-
3113 //+y
-
3114 py_vertices.at(0) = v_vertices.at(2);
-
3115 py_vertices.at(1) = v_vertices.at(3);
-
3116 py_vertices.at(2) = v_vertices.at(7);
-
3117 py_vertices.at(3) = v_vertices.at(6);
-
3118
-
3119 if( texture_file.size()==0 ){//Voxel does not have an associated texture or we are ignoring texture
-
3120
-
3121 addRectangleByVertices( bottom_vertices, color, COORDINATES_CARTESIAN );
-
3122 addRectangleByVertices( top_vertices, color, COORDINATES_CARTESIAN );
-
3123 addRectangleByVertices( mx_vertices, color, COORDINATES_CARTESIAN );
-
3124 addRectangleByVertices( px_vertices, color, COORDINATES_CARTESIAN );
-
3125 addRectangleByVertices( my_vertices, color, COORDINATES_CARTESIAN );
-
3126 addRectangleByVertices( py_vertices, color, COORDINATES_CARTESIAN );
-
3127
-
3128 }else{ //Voxel has a texture
-
3129
-
3130 if( colorPrimitives_UUIDs.find(UUID) == colorPrimitives_UUIDs.end() || colorPrimitives_UUIDs.size()==0 ){//coloring primitive based on texture
-
3131 if( context->isPrimitiveTextureColorOverridden(UUID) ){
-
3132 addRectangleByVertices( bottom_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3133 addRectangleByVertices( top_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3134 addRectangleByVertices( mx_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3135 addRectangleByVertices( px_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3136 addRectangleByVertices( my_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3137 addRectangleByVertices( py_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3138 }else{
-
3139 addRectangleByVertices( bottom_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3140 addRectangleByVertices( top_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3141 addRectangleByVertices( mx_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3142 addRectangleByVertices( px_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3143 addRectangleByVertices( my_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3144 addRectangleByVertices( py_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
-
3145 }
-
3146 }else{//coloring primitive based on primitive data
-
3147 addRectangleByVertices( bottom_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3148 addRectangleByVertices( top_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3149 addRectangleByVertices( mx_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3150 addRectangleByVertices( px_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3151 addRectangleByVertices( my_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3152 addRectangleByVertices( py_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
-
3153 }
-
3154
-
3155 }
-
3156
-
3157
-
3158 }
-
3159
-
3160 }
-
3161 }
-
3162
-
3163 if( message_flag ){
-
3164 std::cout << "done." << std::endl;
+
3075 }else if( ptype == helios::PRIMITIVE_TYPE_VOXEL ){
+
3076
+
3077 std::vector<vec3> v_vertices = context->getPrimitiveVertices(UUID);
+
3078
+
3079 std::vector<vec3> bottom_vertices, top_vertices, mx_vertices, px_vertices, my_vertices, py_vertices;
+
3080 bottom_vertices.resize(4);
+
3081 top_vertices.resize(4);
+
3082 mx_vertices.resize(4);
+
3083 px_vertices.resize(4);
+
3084 my_vertices.resize(4);
+
3085 py_vertices.resize(4);
+
3086
+
3087 //bottom
+
3088 bottom_vertices.at(0) = v_vertices.at(0);
+
3089 bottom_vertices.at(1) = v_vertices.at(1);
+
3090 bottom_vertices.at(2) = v_vertices.at(2);
+
3091 bottom_vertices.at(3) = v_vertices.at(3);
+
3092
+
3093 //top
+
3094 top_vertices.at(0) = v_vertices.at(4);
+
3095 top_vertices.at(1) = v_vertices.at(5);
+
3096 top_vertices.at(2) = v_vertices.at(6);
+
3097 top_vertices.at(3) = v_vertices.at(7);
+
3098
+
3099 //-x
+
3100 mx_vertices.at(0) = v_vertices.at(0);
+
3101 mx_vertices.at(1) = v_vertices.at(3);
+
3102 mx_vertices.at(2) = v_vertices.at(7);
+
3103 mx_vertices.at(3) = v_vertices.at(4);
+
3104
+
3105 //+x
+
3106 px_vertices.at(0) = v_vertices.at(1);
+
3107 px_vertices.at(1) = v_vertices.at(2);
+
3108 px_vertices.at(2) = v_vertices.at(6);
+
3109 px_vertices.at(3) = v_vertices.at(5);
+
3110
+
3111 //-y
+
3112 my_vertices.at(0) = v_vertices.at(0);
+
3113 my_vertices.at(1) = v_vertices.at(1);
+
3114 my_vertices.at(2) = v_vertices.at(5);
+
3115 my_vertices.at(3) = v_vertices.at(4);
+
3116
+
3117 //+y
+
3118 py_vertices.at(0) = v_vertices.at(2);
+
3119 py_vertices.at(1) = v_vertices.at(3);
+
3120 py_vertices.at(2) = v_vertices.at(7);
+
3121 py_vertices.at(3) = v_vertices.at(6);
+
3122
+
3123 if( texture_file.size()==0 ){//Voxel does not have an associated texture or we are ignoring texture
+
3124
+
3125 addRectangleByVertices( bottom_vertices, color, COORDINATES_CARTESIAN );
+
3126 addRectangleByVertices( top_vertices, color, COORDINATES_CARTESIAN );
+
3127 addRectangleByVertices( mx_vertices, color, COORDINATES_CARTESIAN );
+
3128 addRectangleByVertices( px_vertices, color, COORDINATES_CARTESIAN );
+
3129 addRectangleByVertices( my_vertices, color, COORDINATES_CARTESIAN );
+
3130 addRectangleByVertices( py_vertices, color, COORDINATES_CARTESIAN );
+
3131
+
3132 }else{ //Voxel has a texture
+
3133
+
3134 if( colorPrimitives_UUIDs.find(UUID) == colorPrimitives_UUIDs.end() || colorPrimitives_UUIDs.size()==0 ){//coloring primitive based on texture
+
3135 if( context->isPrimitiveTextureColorOverridden(UUID) ){
+
3136 addRectangleByVertices( bottom_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3137 addRectangleByVertices( top_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3138 addRectangleByVertices( mx_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3139 addRectangleByVertices( px_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3140 addRectangleByVertices( my_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3141 addRectangleByVertices( py_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3142 }else{
+
3143 addRectangleByVertices( bottom_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3144 addRectangleByVertices( top_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3145 addRectangleByVertices( mx_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3146 addRectangleByVertices( px_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3147 addRectangleByVertices( my_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3148 addRectangleByVertices( py_vertices, texture_file.c_str(), COORDINATES_CARTESIAN );
+
3149 }
+
3150 }else{//coloring primitive based on primitive data
+
3151 addRectangleByVertices( bottom_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3152 addRectangleByVertices( top_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3153 addRectangleByVertices( mx_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3154 addRectangleByVertices( px_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3155 addRectangleByVertices( my_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3156 addRectangleByVertices( py_vertices, make_RGBcolor(color.r,color.g,color.b), texture_file.c_str(), COORDINATES_CARTESIAN );
+
3157 }
+
3158
+
3159 }
+
3160
+
3161
+
3162 }
+
3163
+
3164 }
3165 }
3166
-
3167}
-
3168
-
3169void Visualizer::colorContextPrimitivesByData( const char* data_name ){
-
3170 colorPrimitivesByData = data_name;
-
3171 colorPrimitivesByObjectData = "";
-
3172 if( !colorPrimitives_UUIDs.empty() ){
-
3173 colorPrimitives_UUIDs.clear();
-
3174 }
-
3175 if( !colorPrimitives_objIDs.empty() ){
-
3176 colorPrimitives_objIDs.clear();
-
3177 }
-
3178}
-
3179
-
3180void Visualizer::colorContextPrimitivesByData( const char* data_name, const std::vector<uint>& UUIDs ){
-
3181 colorPrimitivesByData = data_name;
-
3182 colorPrimitivesByObjectData = "";
-
3183 for( uint UUID : UUIDs ){
-
3184 colorPrimitives_UUIDs[UUID] = UUID;
-
3185 }
-
3186 if( !colorPrimitives_objIDs.empty() ){
-
3187 colorPrimitives_objIDs.clear();
-
3188 }
-
3189}
-
3190
-
3191void Visualizer::colorContextPrimitivesByObjectData( const char* data_name ){
-
3192 colorPrimitivesByObjectData = data_name;
-
3193 colorPrimitivesByData = "";
-
3194 if( !colorPrimitives_UUIDs.empty() ){
-
3195 colorPrimitives_UUIDs.clear();
-
3196 }
-
3197 if( !colorPrimitives_objIDs.empty() ){
-
3198 colorPrimitives_objIDs.clear();
-
3199 }
-
3200}
-
3201
-
3202void Visualizer::colorContextPrimitivesByObjectData( const char* data_name, const std::vector<uint>& ObjIDs ){
-
3203 colorPrimitivesByObjectData = data_name;
-
3204 colorPrimitivesByData = "";
-
3205 for( uint objID : ObjIDs ){
-
3206 colorPrimitives_objIDs[objID] = objID;
-
3207 }
-
3208 if( !colorPrimitives_UUIDs.empty() ){
-
3209 colorPrimitives_UUIDs.clear();
-
3210 }
-
3211}
-
3212
-
3213void Visualizer::colorContextPrimitivesRandomly(const std::vector<uint>& UUIDs ){
-
3214
-
3215 disableColorbar();
-
3216 if( !colorPrimitives_UUIDs.empty() ){
-
3217 colorPrimitives_UUIDs.clear();
-
3218 }
-
3219 for( uint UUID : UUIDs ){
-
3220 float rc = randu();
-
3221 context->setPrimitiveData(UUID, "random_color", rc);
+
3167 if( message_flag ){
+
3168 std::cout << "done." << std::endl;
+
3169 }
+
3170
+
3171}
+
3172
+
+
3173void Visualizer::colorContextPrimitivesByData( const char* data_name ){
+
3174 colorPrimitivesByData = data_name;
+
3175 colorPrimitivesByObjectData = "";
+
3176 if( !colorPrimitives_UUIDs.empty() ){
+
3177 colorPrimitives_UUIDs.clear();
+
3178 }
+
3179 if( !colorPrimitives_objIDs.empty() ){
+
3180 colorPrimitives_objIDs.clear();
+
3181 }
+
3182}
+
+
3183
+
+
3184void Visualizer::colorContextPrimitivesByData( const char* data_name, const std::vector<uint>& UUIDs ){
+
3185 colorPrimitivesByData = data_name;
+
3186 colorPrimitivesByObjectData = "";
+
3187 for( uint UUID : UUIDs ){
+
3188 colorPrimitives_UUIDs[UUID] = UUID;
+
3189 }
+
3190 if( !colorPrimitives_objIDs.empty() ){
+
3191 colorPrimitives_objIDs.clear();
+
3192 }
+
3193}
+
+
3194
+
+
3195void Visualizer::colorContextPrimitivesByObjectData( const char* data_name ){
+
3196 colorPrimitivesByObjectData = data_name;
+
3197 colorPrimitivesByData = "";
+
3198 if( !colorPrimitives_UUIDs.empty() ){
+
3199 colorPrimitives_UUIDs.clear();
+
3200 }
+
3201 if( !colorPrimitives_objIDs.empty() ){
+
3202 colorPrimitives_objIDs.clear();
+
3203 }
+
3204}
+
+
3205
+
+
3206void Visualizer::colorContextPrimitivesByObjectData( const char* data_name, const std::vector<uint>& ObjIDs ){
+
3207 colorPrimitivesByObjectData = data_name;
+
3208 colorPrimitivesByData = "";
+
3209 for( uint objID : ObjIDs ){
+
3210 colorPrimitives_objIDs[objID] = objID;
+
3211 }
+
3212 if( !colorPrimitives_UUIDs.empty() ){
+
3213 colorPrimitives_UUIDs.clear();
+
3214 }
+
3215}
+
+
3216
+
+
3217void Visualizer::colorContextPrimitivesRandomly(const std::vector<uint>& UUIDs ){
+
3218
+
3219 disableColorbar();
+
3220 if( !colorPrimitives_UUIDs.empty() ){
+
3221 colorPrimitives_UUIDs.clear();
3222 }
-
3223
-
3224 colorPrimitivesByData = "random_color";
-
3225 colorPrimitivesByObjectData = "";
-
3226 for( uint UUID : UUIDs ){
-
3227 colorPrimitives_UUIDs[UUID] = UUID;
-
3228 }
-
3229 if( !colorPrimitives_objIDs.empty() ){
-
3230 colorPrimitives_objIDs.clear();
-
3231 }
-
3232}
-
3233
-
3234void Visualizer::colorContextPrimitivesRandomly(){
-
3235
-
3236 disableColorbar();
-
3237
-
3238 std::vector<uint> all_UUIDs = context->getAllUUIDs();
-
3239 for( uint UUID : all_UUIDs ){
-
3240 float rc = randu();
-
3241 context->setPrimitiveData(UUID, "random_color", rc);
-
3242 }
-
3243
-
3244 colorPrimitivesByData = "random_color";
-
3245 colorPrimitivesByObjectData = "";
-
3246 if( !colorPrimitives_UUIDs.empty() ){
-
3247 colorPrimitives_UUIDs.clear();
-
3248 }
-
3249 if( !colorPrimitives_objIDs.empty() ){
-
3250 colorPrimitives_objIDs.clear();
-
3251 }
-
3252
-
3253}
-
3254
-
3255
-
3256void Visualizer::colorContextObjectsRandomly(const std::vector<uint>& ObjIDs ){
-
3257
-
3258 disableColorbar();
-
3259 if( !colorPrimitives_UUIDs.empty() ){
-
3260 colorPrimitives_UUIDs.clear();
-
3261 }
-
3262 for( uint ObjID : ObjIDs ){
-
3263 float rc = randu();
-
3264 context->setObjectData(ObjID, "random_color", rc);
+
3223 for( uint UUID : UUIDs ){
+
3224 float rc = randu();
+
3225 context->setPrimitiveData(UUID, "random_color", rc);
+
3226 }
+
3227
+
3228 colorPrimitivesByData = "random_color";
+
3229 colorPrimitivesByObjectData = "";
+
3230 for( uint UUID : UUIDs ){
+
3231 colorPrimitives_UUIDs[UUID] = UUID;
+
3232 }
+
3233 if( !colorPrimitives_objIDs.empty() ){
+
3234 colorPrimitives_objIDs.clear();
+
3235 }
+
3236}
+
+
3237
+
+
3238void Visualizer::colorContextPrimitivesRandomly(){
+
3239
+
3240 disableColorbar();
+
3241
+
3242 std::vector<uint> all_UUIDs = context->getAllUUIDs();
+
3243 for( uint UUID : all_UUIDs ){
+
3244 float rc = randu();
+
3245 context->setPrimitiveData(UUID, "random_color", rc);
+
3246 }
+
3247
+
3248 colorPrimitivesByData = "random_color";
+
3249 colorPrimitivesByObjectData = "";
+
3250 if( !colorPrimitives_UUIDs.empty() ){
+
3251 colorPrimitives_UUIDs.clear();
+
3252 }
+
3253 if( !colorPrimitives_objIDs.empty() ){
+
3254 colorPrimitives_objIDs.clear();
+
3255 }
+
3256
+
3257}
+
+
3258
+
3259
+
+
3260void Visualizer::colorContextObjectsRandomly(const std::vector<uint>& ObjIDs ){
+
3261
+
3262 disableColorbar();
+
3263 if( !colorPrimitives_UUIDs.empty() ){
+
3264 colorPrimitives_UUIDs.clear();
3265 }
-
3266
-
3267 colorPrimitivesByData = "";
-
3268 colorPrimitivesByObjectData = "random_color";
-
3269
-
3270}
-
3271
-
3272void Visualizer::colorContextObjectsRandomly(){
-
3273 std::vector<uint> all_ObjIDs = context->getAllObjectIDs();
-
3274 disableColorbar();
-
3275 if( !colorPrimitives_UUIDs.empty() ){
-
3276 colorPrimitives_UUIDs.clear();
-
3277 }
-
3278 for( uint ObjID : all_ObjIDs ){
-
3279 float rc = randu();
-
3280 context->setObjectData(ObjID, "random_color", rc);
+
3266 for( uint ObjID : ObjIDs ){
+
3267 float rc = randu();
+
3268 context->setObjectData(ObjID, "random_color", rc);
+
3269 }
+
3270
+
3271 colorPrimitivesByData = "";
+
3272 colorPrimitivesByObjectData = "random_color";
+
3273
+
3274}
+
+
3275
+
+
3276void Visualizer::colorContextObjectsRandomly(){
+
3277 std::vector<uint> all_ObjIDs = context->getAllObjectIDs();
+
3278 disableColorbar();
+
3279 if( !colorPrimitives_UUIDs.empty() ){
+
3280 colorPrimitives_UUIDs.clear();
3281 }
-
3282
-
3283 colorPrimitivesByData = "";
-
3284 colorPrimitivesByObjectData = "random_color";
-
3285
-
3286}
-
3287
-
3288
+
3282 for( uint ObjID : all_ObjIDs ){
+
3283 float rc = randu();
+
3284 context->setObjectData(ObjID, "random_color", rc);
+
3285 }
+
3286
+
3287 colorPrimitivesByData = "";
+
3288 colorPrimitivesByObjectData = "random_color";
3289
-
3290
+
3290}
+
3291
3292
3293
3294
-
3295std::vector<helios::vec3> Visualizer::plotInteractive() {
-
3296
-
3297 if( message_flag ){
-
3298 std::cout << "Generating interactive plot..." << std::endl;
-
3299 }
-
3300
-
3301// glfwShowWindow( (GLFWwindow*) window);
-
3302
-
3303// openWindow();
+
3295
+
3296float dphi = 0.0;
+
3297float dtheta = 0.0;
+
3298float dx = 0.0;
+
3299float dy = 0.0;
+
3300float dz = 0.0;
+
3301float dx_m = 0.0;
+
3302float dy_m = 0.0;
+
3303float dscroll = 0.0;
3304
-
3305 //Update the Context geometry (if needed)
-
3306 if( contextGeomNeedsUpdate ){
-
3307 buildContextGeometry_private();
-
3308 }else{
-
3309 colormap_current.setRange( colorbar_min, colorbar_max );
+
3305
+
+
3306std::vector<helios::vec3> Visualizer::plotInteractive() {
+
3307
+
3308 if( message_flag ){
+
3309 std::cout << "Generating interactive plot..." << std::endl;
3310 }
3311
-
3312 //Update
-
3313 if( colorbar_flag==2 ){
-
3314 addColorbarByCenter( colorbar_title.c_str(), colorbar_size, colorbar_position, colorbar_fontcolor, colormap_current );
-
3315 }
-
3316
-
3317 //Watermark
-
3318 if( isWatermarkVisible ){
-
3319 float hratio = float(Wdisplay)/float(Hdisplay);
-
3320 float width = 0.2389f/0.8f/hratio;
-
3321 addRectangleByCenter( make_vec3(0.75f*width,0.95f,0), make_vec2(width,0.07), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_watermark.png", COORDINATES_WINDOW_NORMALIZED );
-
3322 }
-
3323
-
3324 setupPlot();
-
3325
-
3326 //domain bounding box
-
3327 vec2 xbounds, ybounds, zbounds;
-
3328 getDomainBoundingBox( xbounds, ybounds, zbounds );
-
3329
-
3330 glm::vec3 view_center = glm::vec3( xbounds.x+0.5*(xbounds.y-xbounds.x), ybounds.x+0.5*(ybounds.y-ybounds.x), zbounds.x+0.5*(zbounds.y-zbounds.x) );
-
3331 //float bound_R = 2.f*fmax(xbounds.y-xbounds.x,fmax(ybounds.y-ybounds.x,zbounds.y-zbounds.x));
-
3332 float bound_R = 0.75*sqrtf( pow(xbounds.y-xbounds.x,2) + pow(ybounds.y-ybounds.x,2) + pow(zbounds.y-zbounds.x,2) );
-
3333
-
3334 glm::vec3 lightInvDir = view_center + glm::vec3(light_direction.x,light_direction.y,light_direction.z);
-
3335
-
3336 bool shadow_flag = false;
-
3337 for( uint m=0; m<primaryLightingModel.size(); m++ ){
-
3338 if( primaryLightingModel.at(m) == Visualizer::LIGHTING_PHONG_SHADOWED ){
-
3339 shadow_flag = true;
-
3340 break;
-
3341 }
-
3342 }
-
3343
-
3344 glm::mat4 depthMVP;
-
3345
-
3346 if( shadow_flag ){
-
3347
-
3348 // Depth buffer for shadows
-
3349 glBindFramebuffer(GL_FRAMEBUFFER, framebufferID);
-
3350 glViewport(0,0,8192,8192); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3351 //glViewport(0,0,16384,16384); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3352
-
3353 // Clear the screen
-
3354 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
-
3355
-
3356 depthShader.useShader();
-
3357
-
3358 // Compute the MVP matrix from the light's point of view
-
3359 glm::mat4 depthProjectionMatrix = glm::ortho<float>(-bound_R,bound_R,-bound_R,bound_R,-bound_R,bound_R);
-
3360 glm::mat4 depthViewMatrix = glm::lookAt(lightInvDir, view_center, glm::vec3(0,0,1));
-
3361 depthMVP = depthProjectionMatrix * depthViewMatrix;
-
3362
-
3363 depthShader.setTransformationMatrix( depthMVP );
-
3364
-
3365 //bind depth texture
-
3366 glActiveTexture(GL_TEXTURE1);
-
3367 glBindTexture(GL_TEXTURE_2D, depthTexture);
+
3312// glfwShowWindow( (GLFWwindow*) window);
+
3313
+
3314// openWindow();
+
3315
+
3316 //Update the Context geometry (if needed)
+
3317 if( contextGeomNeedsUpdate ){
+
3318 buildContextGeometry_private();
+
3319 }else{
+
3320 colormap_current.setRange( colorbar_min, colorbar_max );
+
3321 }
+
3322
+
3323 //Update
+
3324 if( colorbar_flag==2 ){
+
3325 addColorbarByCenter( colorbar_title.c_str(), colorbar_size, colorbar_position, colorbar_fontcolor, colormap_current );
+
3326 }
+
3327
+
3328 //Watermark
+
3329 if( isWatermarkVisible ){
+
3330 float hratio = float(Wdisplay)/float(Hdisplay);
+
3331 float width = 0.2389f/0.8f/hratio;
+
3332 addRectangleByCenter( make_vec3(0.75f*width,0.95f,0), make_vec2(width,0.07), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_watermark.png", COORDINATES_WINDOW_NORMALIZED );
+
3333 }
+
3334
+
3335 setupPlot();
+
3336
+
3337 //domain bounding box
+
3338 vec2 xbounds, ybounds, zbounds;
+
3339 getDomainBoundingBox( xbounds, ybounds, zbounds );
+
3340
+
3341 glm::vec3 view_center = glm::vec3( xbounds.x+0.5*(xbounds.y-xbounds.x), ybounds.x+0.5*(ybounds.y-ybounds.x), zbounds.x+0.5*(zbounds.y-zbounds.x) );
+
3342 //float bound_R = 2.f*fmax(xbounds.y-xbounds.x,fmax(ybounds.y-ybounds.x,zbounds.y-zbounds.x));
+
3343 float bound_R = 0.75*sqrtf( pow(xbounds.y-xbounds.x,2) + pow(ybounds.y-ybounds.x,2) + pow(zbounds.y-zbounds.x,2) );
+
3344
+
3345 glm::vec3 lightInvDir = view_center + glm::vec3(light_direction.x,light_direction.y,light_direction.z);
+
3346
+
3347 bool shadow_flag = false;
+
3348 for( uint m=0; m<primaryLightingModel.size(); m++ ){
+
3349 if( primaryLightingModel.at(m) == Visualizer::LIGHTING_PHONG_SHADOWED ){
+
3350 shadow_flag = true;
+
3351 break;
+
3352 }
+
3353 }
+
3354
+
3355 glm::mat4 depthMVP;
+
3356
+
3357 if( shadow_flag ){
+
3358
+
3359 // Depth buffer for shadows
+
3360 glBindFramebuffer(GL_FRAMEBUFFER, framebufferID);
+
3361 glViewport(0,0,8192,8192); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3362 //glViewport(0,0,16384,16384); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3363
+
3364 // Clear the screen
+
3365 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3366
+
3367 depthShader.useShader();
3368
-
3369 depthShader.enableTextureMaps();
-
3370 depthShader.enableTextureMasks();
-
3371
-
3372 render( 1 );
+
3369 // Compute the MVP matrix from the light's point of view
+
3370 glm::mat4 depthProjectionMatrix = glm::ortho<float>(-bound_R,bound_R,-bound_R,bound_R,-bound_R,bound_R);
+
3371 glm::mat4 depthViewMatrix = glm::lookAt(lightInvDir, view_center, glm::vec3(0,0,1));
+
3372 depthMVP = depthProjectionMatrix * depthViewMatrix;
3373
-
3374 }else{
+
3374 depthShader.setTransformationMatrix( depthMVP );
3375
-
3376 depthMVP = glm::mat4(1.0);
-
3377
-
3378 }
+
3376 //bind depth texture
+
3377 glActiveTexture(GL_TEXTURE1);
+
3378 glBindTexture(GL_TEXTURE_2D, depthTexture);
3379
-
3380 assert(checkerrors());
-
3381
-
3382 std::vector<vec3> camera_output;
-
3383
-
3384 glfwShowWindow( (GLFWwindow*) window);
-
3385
-
3386 do{
-
3387
-
3388 // Render to the screen
-
3389 glBindFramebuffer(GL_FRAMEBUFFER, 0);
-
3390 //glViewport(0,0,Wdisplay,Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3391 glViewport(0,0,Wframebuffer,Hframebuffer);
+
3380 depthShader.enableTextureMaps();
+
3381 depthShader.enableTextureMasks();
+
3382
+
3383 render( 1 );
+
3384
+
3385 }else{
+
3386
+
3387 depthMVP = glm::mat4(1.0);
+
3388
+
3389 }
+
3390
+
3391 assert(checkerrors());
3392
-
3393 glClearColor(backgroundColor.r, backgroundColor.g, backgroundColor.b, 0.0f);
+
3393 std::vector<vec3> camera_output;
3394
-
3395 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3395 glfwShowWindow( (GLFWwindow*) window);
3396
-
3397 primaryShader.useShader();
+
3397 do{
3398
-
3399 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
-
3400
-
3401 glm::mat4 biasMatrix(
-
3402 0.5, 0.0, 0.0, 0.0,
-
3403 0.0, 0.5, 0.0, 0.0,
-
3404 0.0, 0.0, 0.5, 0.0,
-
3405 0.5, 0.5, 0.5, 1.0
-
3406 );
+
3399 // Render to the screen
+
3400 glBindFramebuffer(GL_FRAMEBUFFER, 0);
+
3401 //glViewport(0,0,Wdisplay,Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3402 glViewport(0,0,Wframebuffer,Hframebuffer);
+
3403
+
3404 glClearColor(backgroundColor.r, backgroundColor.g, backgroundColor.b, 0.0f);
+
3405
+
3406 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
3407
-
3408 glm::mat4 DepthBiasMVP = biasMatrix*depthMVP;
+
3408 primaryShader.useShader();
3409
-
3410 primaryShader.setDepthBiasMatrix( DepthBiasMVP );
+
3410 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
3411
-
3412 primaryShader.setTransformationMatrix( perspectiveTransformationMatrix );
-
3413
-
3414 primaryShader.enableTextureMaps();
-
3415 primaryShader.enableTextureMasks();
-
3416
-
3417 primaryShader.setLightingModel( primaryLightingModel.at(0) );
-
3418 primaryShader.setLightIntensity( lightintensity );
-
3419
-
3420 glBindTexture(GL_TEXTURE_2D, depthTexture);
-
3421 glUniform1i(primaryShader.shadowmapUniform,1);
+
3412 glm::mat4 biasMatrix(
+
3413 0.5, 0.0, 0.0, 0.0,
+
3414 0.0, 0.5, 0.0, 0.0,
+
3415 0.0, 0.0, 0.5, 0.0,
+
3416 0.5, 0.5, 0.5, 1.0
+
3417 );
+
3418
+
3419 glm::mat4 DepthBiasMVP = biasMatrix*depthMVP;
+
3420
+
3421 primaryShader.setDepthBiasMatrix( DepthBiasMVP );
3422
-
3423 render( 0 );
+
3423 primaryShader.setTransformationMatrix( perspectiveTransformationMatrix );
3424
-
3425 glfwPollEvents();
-
3426 getViewKeystrokes( camera_eye_location, camera_lookat_center );
+
3425 primaryShader.enableTextureMaps();
+
3426 primaryShader.enableTextureMasks();
3427
-
3428 glfwSwapBuffers((GLFWwindow*)window);
-
3429
-
3430 glfwWaitEvents();
-
3431
-
3432 int width, height;
-
3433 //glfwGetWindowSize((GLFWwindow*)window, &width, &height );
-
3434 //Wdisplay = width;
-
3435 //Hdisplay = height;
-
3436 glfwGetFramebufferSize((GLFWwindow*)window, &width, &height );
-
3437 Wframebuffer = width;
-
3438 Hframebuffer = height;
-
3439
-
3440 }while( glfwGetKey((GLFWwindow*)window, GLFW_KEY_ESCAPE ) != GLFW_PRESS && glfwWindowShouldClose((GLFWwindow*)window) == 0 );
-
3441
-
3442 glfwPollEvents();
-
3443
-
3444 assert(checkerrors());
-
3445
-
3446 camera_output.push_back(camera_eye_location);
-
3447 camera_output.push_back(camera_lookat_center);
-
3448
-
3449 return camera_output;
+
3428 primaryShader.setLightingModel( primaryLightingModel.at(0) );
+
3429 primaryShader.setLightIntensity( lightintensity );
+
3430
+
3431 glBindTexture(GL_TEXTURE_2D, depthTexture);
+
3432 glUniform1i(primaryShader.shadowmapUniform,1);
+
3433
+
3434 render( 0 );
+
3435
+
3436 glfwPollEvents();
+
3437 getViewKeystrokes( camera_eye_location, camera_lookat_center );
+
3438
+
3439 glfwSwapBuffers((GLFWwindow*)window);
+
3440
+
3441 glfwWaitEvents();
+
3442
+
3443 int width, height;
+
3444 //glfwGetWindowSize((GLFWwindow*)window, &width, &height );
+
3445 //Wdisplay = width;
+
3446 //Hdisplay = height;
+
3447 glfwGetFramebufferSize((GLFWwindow*)window, &width, &height );
+
3448 Wframebuffer = width;
+
3449 Hframebuffer = height;
3450
-
3451}
+
3451 }while( glfwGetKey((GLFWwindow*)window, GLFW_KEY_ESCAPE ) != GLFW_PRESS && glfwWindowShouldClose((GLFWwindow*)window) == 0 );
3452
-
3453void Visualizer::setupPlot(){
+
3453 glfwPollEvents();
3454
-
3455 glEnableVertexAttribArray(0); //position
-
3456 glEnableVertexAttribArray(1); //color
-
3457 glEnableVertexAttribArray(2); //normal
-
3458 glEnableVertexAttribArray(3); //uv
-
3459 glEnableVertexAttribArray(4); //texture flag
-
3460 glEnableVertexAttribArray(5); //coordinate flag
+
3455 assert(checkerrors());
+
3456
+
3457 camera_output.push_back(camera_eye_location);
+
3458 camera_output.push_back(camera_lookat_center);
+
3459
+
3460 return camera_output;
3461
-
3462 std::vector<float> position_data, color_data, normal_data, uv_data;
-
3463 std::vector<int> coordinate_data, texture_data, textureID_data;
-
3464
-
3465 std::vector<std::string> keys{"triangle", "line", "point", "sky" };
-
3466
-
3467 for( int i=0; i<keys.size(); i++ ){
-
3468 position_data.insert( position_data.end(), positionData[keys.at(i)].begin(), positionData[keys.at(i)].end() );
-
3469 color_data.insert( color_data.end(), colorData[keys.at(i)].begin(), colorData[keys.at(i)].end() );
-
3470 normal_data.insert( normal_data.end(), normalData[keys.at(i)].begin(), normalData[keys.at(i)].end() );
-
3471 uv_data.insert( uv_data.end(), uvData[keys.at(i)].begin(), uvData[keys.at(i)].end() );
-
3472 coordinate_data.insert( coordinate_data.end(), coordinateFlagData[keys.at(i)].begin(), coordinateFlagData[keys.at(i)].end() );
-
3473 texture_data.insert( texture_data.end(), textureFlagData[keys.at(i)].begin(), textureFlagData[keys.at(i)].end() );
-
3474 }
+
3462}
+
+
3463
+
3464void Visualizer::setupPlot(){
+
3465
+
3466 glEnableVertexAttribArray(0); //position
+
3467 glEnableVertexAttribArray(1); //color
+
3468 glEnableVertexAttribArray(2); //normal
+
3469 glEnableVertexAttribArray(3); //uv
+
3470 glEnableVertexAttribArray(4); //texture flag
+
3471 glEnableVertexAttribArray(5); //coordinate flag
+
3472
+
3473 std::vector<float> position_data, color_data, normal_data, uv_data;
+
3474 std::vector<int> coordinate_data, texture_data, textureID_data;
3475
-
3476 // 1st attribute buffer : vertex positions
-
3477 glBindBuffer(GL_ARRAY_BUFFER, positionBuffer );
-
3478 glBufferData(GL_ARRAY_BUFFER, position_data.size()*sizeof(GLfloat), &position_data[0], GL_STATIC_DRAW);
-
3479 glVertexAttribPointer( 0, 3, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3480
-
3481 // 2nd attribute buffer : vertex colors
-
3482 glBindBuffer(GL_ARRAY_BUFFER, colorBuffer );
-
3483 glBufferData(GL_ARRAY_BUFFER, color_data.size()*sizeof(GLfloat), &color_data[0], GL_STATIC_DRAW);
-
3484 glVertexAttribPointer( 1, 4, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3485
-
3486 // 3rd attribute buffer : vertex normals
-
3487 glBindBuffer(GL_ARRAY_BUFFER, normalBuffer );
-
3488 glBufferData(GL_ARRAY_BUFFER, normal_data.size()*sizeof(GLfloat), &normal_data[0], GL_STATIC_DRAW);
-
3489 glVertexAttribPointer( 2, 3, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3490
-
3491 // 4th attribute buffer : vertex uv
-
3492 glBindBuffer(GL_ARRAY_BUFFER, uvBuffer );
-
3493 glBufferData(GL_ARRAY_BUFFER, uv_data.size()*sizeof(GLfloat), &uv_data[0], GL_STATIC_DRAW);
-
3494 glVertexAttribPointer( 3, 2, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3495
-
3496 // 5th attribute buffer : vertex texture flag
-
3497 glBindBuffer(GL_ARRAY_BUFFER, textureFlagBuffer );
-
3498 glBufferData(GL_ARRAY_BUFFER, texture_data.size()*sizeof(GLint), &texture_data[0], GL_STATIC_DRAW);
-
3499 glVertexAttribIPointer( 4, 1, GL_INT, 0, (void*)0 );
-
3500
-
3501 // 6th attribute buffer : vertex coordinate flag
-
3502 glBindBuffer(GL_ARRAY_BUFFER, coordinateFlagBuffer );
-
3503 glBufferData(GL_ARRAY_BUFFER, coordinate_data.size()*sizeof(GLint), &coordinate_data[0], GL_STATIC_DRAW);
-
3504 glVertexAttribIPointer( 5, 1, GL_INT, 0, (void*)0 );
-
3505
-
3506 //figure out texture switches
-
3507
-
3508 uint textureID_current;
-
3509 if( textureIDData["triangle"].size()==0 ){
-
3510 textureID_current = 0;
-
3511 }else{
-
3512 textureID_current = textureIDData["triangle"].at(0);
-
3513 }
-
3514
-
3515 size_t start_current = 0;
-
3516 for( size_t p=1; p<textureIDData["triangle"].size(); p++ ){
-
3517
-
3518 if( textureID_current!=textureIDData["triangle"].at(p) || p == textureIDData["triangle"].size()-1 ){
-
3519 group_start[ start_current ] = make_int2(textureID_current,p-start_current+1);
-
3520 textureID_current = textureIDData["triangle"].at(p);
-
3521 start_current = p;
-
3522 }else{
-
3523 continue;
-
3524 }
+
3476 std::vector<std::string> keys{"triangle", "line", "point", "sky" };
+
3477
+
3478 for( int i=0; i<keys.size(); i++ ){
+
3479 position_data.insert( position_data.end(), positionData[keys.at(i)].begin(), positionData[keys.at(i)].end() );
+
3480 color_data.insert( color_data.end(), colorData[keys.at(i)].begin(), colorData[keys.at(i)].end() );
+
3481 normal_data.insert( normal_data.end(), normalData[keys.at(i)].begin(), normalData[keys.at(i)].end() );
+
3482 uv_data.insert( uv_data.end(), uvData[keys.at(i)].begin(), uvData[keys.at(i)].end() );
+
3483 coordinate_data.insert( coordinate_data.end(), coordinateFlagData[keys.at(i)].begin(), coordinateFlagData[keys.at(i)].end() );
+
3484 texture_data.insert( texture_data.end(), textureFlagData[keys.at(i)].begin(), textureFlagData[keys.at(i)].end() );
+
3485 }
+
3486
+
3487 // 1st attribute buffer : vertex positions
+
3488 glBindBuffer(GL_ARRAY_BUFFER, positionBuffer );
+
3489 glBufferData(GL_ARRAY_BUFFER, position_data.size()*sizeof(GLfloat), &position_data[0], GL_STATIC_DRAW);
+
3490 glVertexAttribPointer( 0, 3, GL_FLOAT, GL_FALSE, 0, (void*)0 );
+
3491
+
3492 // 2nd attribute buffer : vertex colors
+
3493 glBindBuffer(GL_ARRAY_BUFFER, colorBuffer );
+
3494 glBufferData(GL_ARRAY_BUFFER, color_data.size()*sizeof(GLfloat), &color_data[0], GL_STATIC_DRAW);
+
3495 glVertexAttribPointer( 1, 4, GL_FLOAT, GL_FALSE, 0, (void*)0 );
+
3496
+
3497 // 3rd attribute buffer : vertex normals
+
3498 glBindBuffer(GL_ARRAY_BUFFER, normalBuffer );
+
3499 glBufferData(GL_ARRAY_BUFFER, normal_data.size()*sizeof(GLfloat), &normal_data[0], GL_STATIC_DRAW);
+
3500 glVertexAttribPointer( 2, 3, GL_FLOAT, GL_FALSE, 0, (void*)0 );
+
3501
+
3502 // 4th attribute buffer : vertex uv
+
3503 glBindBuffer(GL_ARRAY_BUFFER, uvBuffer );
+
3504 glBufferData(GL_ARRAY_BUFFER, uv_data.size()*sizeof(GLfloat), &uv_data[0], GL_STATIC_DRAW);
+
3505 glVertexAttribPointer( 3, 2, GL_FLOAT, GL_FALSE, 0, (void*)0 );
+
3506
+
3507 // 5th attribute buffer : vertex texture flag
+
3508 glBindBuffer(GL_ARRAY_BUFFER, textureFlagBuffer );
+
3509 glBufferData(GL_ARRAY_BUFFER, texture_data.size()*sizeof(GLint), &texture_data[0], GL_STATIC_DRAW);
+
3510 glVertexAttribIPointer( 4, 1, GL_INT, 0, (void*)0 );
+
3511
+
3512 // 6th attribute buffer : vertex coordinate flag
+
3513 glBindBuffer(GL_ARRAY_BUFFER, coordinateFlagBuffer );
+
3514 glBufferData(GL_ARRAY_BUFFER, coordinate_data.size()*sizeof(GLint), &coordinate_data[0], GL_STATIC_DRAW);
+
3515 glVertexAttribIPointer( 5, 1, GL_INT, 0, (void*)0 );
+
3516
+
3517 //figure out texture switches
+
3518
+
3519 uint textureID_current;
+
3520 if( textureIDData["triangle"].size()==0 ){
+
3521 textureID_current = 0;
+
3522 }else{
+
3523 textureID_current = textureIDData["triangle"].at(0);
+
3524 }
3525
-
3526 }
-
3527
-
3528}
-
3529
-
3530void Visualizer::render( bool shadow ){
-
3531
-
3532 //--- Triangles------
-
3533
-
3534 uint textureID_current;
-
3535 if( textureIDData["triangle"].size()==0 ){
-
3536 textureID_current = 0;
-
3537 }else{
-
3538 textureID_current = textureIDData["triangle"].at(0);
-
3539 }
+
3526 size_t start_current = 0;
+
3527 for( size_t p=1; p<textureIDData["triangle"].size(); p++ ){
+
3528
+
3529 if( textureID_current!=textureIDData["triangle"].at(p) || p == textureIDData["triangle"].size()-1 ){
+
3530 group_start[ start_current ] = make_int2(textureID_current,p-start_current+1);
+
3531 textureID_current = textureIDData["triangle"].at(p);
+
3532 start_current = p;
+
3533 }else{
+
3534 continue;
+
3535 }
+
3536
+
3537 }
+
3538
+
3539}
3540
-
3541 glBindTexture(GL_TEXTURE_RECTANGLE,0);
+
3541void Visualizer::render( bool shadow ){
3542
-
3543 for( std::map<uint,int2>::iterator iter=group_start.begin(); iter!=group_start.end(); ++iter ){
+
3543 //--- Triangles------
3544
-
3545 if( iter->second.x!=0 ){
-
3546 glBindTexture(GL_TEXTURE_RECTANGLE,iter->second.x);
-
3547 }
-
3548
-
3549 glDrawArrays(GL_TRIANGLES, iter->first, iter->second.y );
-
3550
-
3551 }
-
3552
-
3553 if( !shadow ){
-
3554
-
3555 size_t triangle_size = positionData["triangle"].size()/3;
-
3556 size_t line_size = positionData["line"].size()/3;
-
3557 size_t point_size = positionData["point"].size()/3;
-
3558
-
3559 if( line_size>0 ){
-
3560 glDrawArrays(GL_LINES, triangle_size, line_size );
-
3561 }
-
3562
-
3563 if( point_size>0 ){
-
3564 glPointSize( point_width );
-
3565 glDrawArrays(GL_POINTS, triangle_size+line_size, point_size );
-
3566 }
-
3567
-
3568 if( positionData["sky"].size()>0 ){
-
3569 primaryShader.setLightingModel( LIGHTING_NONE );
-
3570 glBindTexture(GL_TEXTURE_RECTANGLE,textureIDData["sky"].at(0));
-
3571 glDrawArrays(GL_TRIANGLES, triangle_size+line_size+point_size, positionData["sky"].size()/3 );
+
3545 uint textureID_current;
+
3546 if( textureIDData["triangle"].size()==0 ){
+
3547 textureID_current = 0;
+
3548 }else{
+
3549 textureID_current = textureIDData["triangle"].at(0);
+
3550 }
+
3551
+
3552 glBindTexture(GL_TEXTURE_RECTANGLE,0);
+
3553
+
3554 for( std::map<uint,int2>::iterator iter=group_start.begin(); iter!=group_start.end(); ++iter ){
+
3555
+
3556 if( iter->second.x!=0 ){
+
3557 glBindTexture(GL_TEXTURE_RECTANGLE,iter->second.x);
+
3558 }
+
3559
+
3560 glDrawArrays(GL_TRIANGLES, iter->first, iter->second.y );
+
3561
+
3562 }
+
3563
+
3564 if( !shadow ){
+
3565
+
3566 size_t triangle_size = positionData["triangle"].size()/3;
+
3567 size_t line_size = positionData["line"].size()/3;
+
3568 size_t point_size = positionData["point"].size()/3;
+
3569
+
3570 if( line_size>0 ){
+
3571 glDrawArrays(GL_LINES, triangle_size, line_size );
3572 }
3573
-
3574 }
-
3575
-
3576}
-
3577
-
3578void Visualizer::plotUpdate() {
-
3579 plotUpdate( false );
-
3580}
-
3581
-
3582void Visualizer::plotUpdate( bool hide_window ){
-
3583
-
3584 if( message_flag ){
-
3585 std::cout << "Updating the plot..." << std::flush;
-
3586 }
-
3587
-
3588 if( !hide_window ) {
-
3589 glfwShowWindow((GLFWwindow *) window);
-
3590 }
-
3591
-
3592 //Update the Context geometry (if needed)
-
3593 if( contextGeomNeedsUpdate ){
-
3594 buildContextGeometry_private();
-
3595 }else{
-
3596 colormap_current.setRange( colorbar_min, colorbar_max );
+
3574 if( point_size>0 ){
+
3575 glPointSize( point_width );
+
3576 glDrawArrays(GL_POINTS, triangle_size+line_size, point_size );
+
3577 }
+
3578
+
3579 if( positionData["sky"].size()>0 ){
+
3580 primaryShader.setLightingModel( LIGHTING_NONE );
+
3581 glBindTexture(GL_TEXTURE_RECTANGLE,textureIDData["sky"].at(0));
+
3582 glDrawArrays(GL_TRIANGLES, triangle_size+line_size+point_size, positionData["sky"].size()/3 );
+
3583 }
+
3584
+
3585 }
+
3586
+
3587}
+
3588
+
+
3589void Visualizer::plotUpdate() {
+
3590 plotUpdate( false );
+
3591}
+
+
3592
+
+
3593void Visualizer::plotUpdate( bool hide_window ){
+
3594
+
3595 if( message_flag ){
+
3596 std::cout << "Updating the plot..." << std::flush;
3597 }
3598
-
3599 //Update
-
3600 if( colorbar_flag==2 ){
-
3601 addColorbarByCenter( colorbar_title.c_str(), colorbar_size, colorbar_position, colorbar_fontcolor, colormap_current );
-
3602 }
-
3603
-
3604 //Watermark
-
3605 if( isWatermarkVisible ){
-
3606 float hratio = float(Wdisplay)/float(Hdisplay);
-
3607 float width = 0.2389f/0.8f/hratio;
-
3608 addRectangleByCenter( make_vec3(0.75f*width,0.95f,0), make_vec2(width,0.07), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_watermark.png", COORDINATES_WINDOW_NORMALIZED );
-
3609 }
-
3610
-
3611 setupPlot();
-
3612
-
3613 //domain bounding box
-
3614 vec2 xbounds, ybounds, zbounds;
-
3615 getDomainBoundingBox( xbounds, ybounds, zbounds );
-
3616
-
3617 glm::vec3 view_center = glm::vec3( xbounds.x+0.5*(xbounds.y-xbounds.x), ybounds.x+0.5*(ybounds.y-ybounds.x), zbounds.x+0.5*(zbounds.y-zbounds.x) );
-
3618 //float bound_R = 2.f*fmax(xbounds.y-xbounds.x,fmax(ybounds.y-ybounds.x,zbounds.y-zbounds.x));
-
3619 float bound_R = 0.75*sqrtf( pow(xbounds.y-xbounds.x,2) + pow(ybounds.y-ybounds.x,2) + pow(zbounds.y-zbounds.x,2) );
-
3620
-
3621 glm::vec3 lightInvDir = view_center + glm::vec3(light_direction.x,light_direction.y,light_direction.z);
-
3622
-
3623 bool shadow_flag = false;
-
3624 for( uint m=0; m<primaryLightingModel.size(); m++ ){
-
3625 if( primaryLightingModel.at(m) == Visualizer::LIGHTING_PHONG_SHADOWED ){
-
3626 shadow_flag = true;
-
3627 break;
-
3628 }
-
3629 }
-
3630
-
3631 glm::mat4 depthMVP;
-
3632
-
3633 if( shadow_flag ){
-
3634
-
3635 // Depth buffer for shadows
-
3636 glBindFramebuffer(GL_FRAMEBUFFER, framebufferID);
-
3637 glViewport(0,0,8192,8192); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3638 //glViewport(0,0,16384,16384); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3639
-
3640 // Clear the screen
-
3641 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
-
3642
-
3643 depthShader.useShader();
-
3644
-
3645 // Compute the MVP matrix from the light's point of view
-
3646 glm::mat4 depthProjectionMatrix = glm::ortho<float>(-bound_R,bound_R,-bound_R,bound_R,-bound_R,bound_R);
-
3647 glm::mat4 depthViewMatrix = glm::lookAt(lightInvDir, view_center, glm::vec3(0,0,1));
-
3648 depthMVP = depthProjectionMatrix * depthViewMatrix;
-
3649
-
3650 depthShader.setTransformationMatrix( depthMVP );
-
3651
-
3652 //bind depth texture
-
3653 glActiveTexture(GL_TEXTURE1);
-
3654 glBindTexture(GL_TEXTURE_2D, depthTexture);
+
3599 if( !hide_window ) {
+
3600 glfwShowWindow((GLFWwindow *) window);
+
3601 }
+
3602
+
3603 //Update the Context geometry (if needed)
+
3604 if( contextGeomNeedsUpdate ){
+
3605 buildContextGeometry_private();
+
3606 }else{
+
3607 colormap_current.setRange( colorbar_min, colorbar_max );
+
3608 }
+
3609
+
3610 //Update
+
3611 if( colorbar_flag==2 ){
+
3612 addColorbarByCenter( colorbar_title.c_str(), colorbar_size, colorbar_position, colorbar_fontcolor, colormap_current );
+
3613 }
+
3614
+
3615 //Watermark
+
3616 if( isWatermarkVisible ){
+
3617 float hratio = float(Wdisplay)/float(Hdisplay);
+
3618 float width = 0.2389f/0.8f/hratio;
+
3619 addRectangleByCenter( make_vec3(0.75f*width,0.95f,0), make_vec2(width,0.07), make_SphericalCoord(0,0), "plugins/visualizer/textures/Helios_watermark.png", COORDINATES_WINDOW_NORMALIZED );
+
3620 }
+
3621
+
3622 setupPlot();
+
3623
+
3624 //domain bounding box
+
3625 vec2 xbounds, ybounds, zbounds;
+
3626 getDomainBoundingBox( xbounds, ybounds, zbounds );
+
3627
+
3628 glm::vec3 view_center = glm::vec3( xbounds.x+0.5*(xbounds.y-xbounds.x), ybounds.x+0.5*(ybounds.y-ybounds.x), zbounds.x+0.5*(zbounds.y-zbounds.x) );
+
3629 //float bound_R = 2.f*fmax(xbounds.y-xbounds.x,fmax(ybounds.y-ybounds.x,zbounds.y-zbounds.x));
+
3630 float bound_R = 0.75*sqrtf( pow(xbounds.y-xbounds.x,2) + pow(ybounds.y-ybounds.x,2) + pow(zbounds.y-zbounds.x,2) );
+
3631
+
3632 glm::vec3 lightInvDir = view_center + glm::vec3(light_direction.x,light_direction.y,light_direction.z);
+
3633
+
3634 bool shadow_flag = false;
+
3635 for( uint m=0; m<primaryLightingModel.size(); m++ ){
+
3636 if( primaryLightingModel.at(m) == Visualizer::LIGHTING_PHONG_SHADOWED ){
+
3637 shadow_flag = true;
+
3638 break;
+
3639 }
+
3640 }
+
3641
+
3642 glm::mat4 depthMVP;
+
3643
+
3644 if( shadow_flag ){
+
3645
+
3646 // Depth buffer for shadows
+
3647 glBindFramebuffer(GL_FRAMEBUFFER, framebufferID);
+
3648 glViewport(0,0,8192,8192); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3649 //glViewport(0,0,16384,16384); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3650
+
3651 // Clear the screen
+
3652 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3653
+
3654 depthShader.useShader();
3655
-
3656 depthShader.enableTextureMaps();
-
3657 depthShader.enableTextureMasks();
-
3658
-
3659 render( 1 );
+
3656 // Compute the MVP matrix from the light's point of view
+
3657 glm::mat4 depthProjectionMatrix = glm::ortho<float>(-bound_R,bound_R,-bound_R,bound_R,-bound_R,bound_R);
+
3658 glm::mat4 depthViewMatrix = glm::lookAt(lightInvDir, view_center, glm::vec3(0,0,1));
+
3659 depthMVP = depthProjectionMatrix * depthViewMatrix;
3660
-
3661 }else{
+
3661 depthShader.setTransformationMatrix( depthMVP );
3662
-
3663 depthMVP = glm::mat4(1.0);
-
3664
-
3665 }
+
3663 //bind depth texture
+
3664 glActiveTexture(GL_TEXTURE1);
+
3665 glBindTexture(GL_TEXTURE_2D, depthTexture);
3666
-
3667 assert(checkerrors());
-
3668
-
3669 // Render to the screen
-
3670 glBindFramebuffer(GL_FRAMEBUFFER, 0);
-
3671 //glViewport(0,0,Wdisplay,Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3672 glViewport(0,0,Wframebuffer,Hframebuffer);
+
3667 depthShader.enableTextureMaps();
+
3668 depthShader.enableTextureMasks();
+
3669
+
3670 render( 1 );
+
3671
+
3672 }else{
3673
-
3674 glClearColor(backgroundColor.r, backgroundColor.g, backgroundColor.b, 0.0f);
+
3674 depthMVP = glm::mat4(1.0);
3675
-
3676 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3676 }
3677
-
3678 primaryShader.useShader();
+
3678 assert(checkerrors());
3679
-
3680 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
-
3681
-
3682 glm::mat4 biasMatrix(
-
3683 0.5, 0.0, 0.0, 0.0,
-
3684 0.0, 0.5, 0.0, 0.0,
-
3685 0.0, 0.0, 0.5, 0.0,
-
3686 0.5, 0.5, 0.5, 1.0
-
3687 );
+
3680 // Render to the screen
+
3681 glBindFramebuffer(GL_FRAMEBUFFER, 0);
+
3682 //glViewport(0,0,Wdisplay,Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3683 glViewport(0,0,Wframebuffer,Hframebuffer);
+
3684
+
3685 glClearColor(backgroundColor.r, backgroundColor.g, backgroundColor.b, 0.0f);
+
3686
+
3687 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
3688
-
3689 glm::mat4 DepthBiasMVP = biasMatrix*depthMVP;
+
3689 primaryShader.useShader();
3690
-
3691 primaryShader.setDepthBiasMatrix( DepthBiasMVP );
+
3691 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
3692
-
3693 primaryShader.setTransformationMatrix( perspectiveTransformationMatrix );
-
3694
-
3695 primaryShader.enableTextureMaps();
-
3696 primaryShader.enableTextureMasks();
-
3697
-
3698 primaryShader.setLightingModel( primaryLightingModel.at(0) );
-
3699 primaryShader.setLightIntensity( lightintensity );
-
3700
-
3701 glBindTexture(GL_TEXTURE_2D, depthTexture);
-
3702 glUniform1i(primaryShader.shadowmapUniform,1);
+
3693 glm::mat4 biasMatrix(
+
3694 0.5, 0.0, 0.0, 0.0,
+
3695 0.0, 0.5, 0.0, 0.0,
+
3696 0.0, 0.0, 0.5, 0.0,
+
3697 0.5, 0.5, 0.5, 1.0
+
3698 );
+
3699
+
3700 glm::mat4 DepthBiasMVP = biasMatrix*depthMVP;
+
3701
+
3702 primaryShader.setDepthBiasMatrix( DepthBiasMVP );
3703
-
3704 render( 0 );
+
3704 primaryShader.setTransformationMatrix( perspectiveTransformationMatrix );
3705
-
3706 glfwPollEvents();
-
3707 getViewKeystrokes( camera_eye_location, camera_lookat_center );
+
3706 primaryShader.enableTextureMaps();
+
3707 primaryShader.enableTextureMasks();
3708
-
3709 int width, height;
-
3710 glfwGetFramebufferSize((GLFWwindow *) window, &width, &height);
-
3711 Wframebuffer = width;
-
3712 Hframebuffer = height;
-
3713
-
3714 glfwSwapBuffers((GLFWwindow*)window);
-
3715
-
3716 if( message_flag ){
-
3717 std::cout << "done." << std::endl;
-
3718 }
+
3709 primaryShader.setLightingModel( primaryLightingModel.at(0) );
+
3710 primaryShader.setLightIntensity( lightintensity );
+
3711
+
3712 glBindTexture(GL_TEXTURE_2D, depthTexture);
+
3713 glUniform1i(primaryShader.shadowmapUniform,1);
+
3714
+
3715 render( 0 );
+
3716
+
3717 glfwPollEvents();
+
3718 getViewKeystrokes( camera_eye_location, camera_lookat_center );
3719
-
3720}
-
3721
-
3722void Visualizer::plotDepthMap() {
-
3723
-
3724 if( message_flag ){
-
3725 std::cout << "Rendering depth map..." << std::flush;
-
3726 }
-
3727
-
3728 //Update the Context geometry (if needed)
-
3729 if( contextGeomNeedsUpdate ){
-
3730 buildContextGeometry_private();
-
3731 }
+
3720 int width, height;
+
3721 glfwGetFramebufferSize((GLFWwindow *) window, &width, &height);
+
3722 Wframebuffer = width;
+
3723 Hframebuffer = height;
+
3724
+
3725 glfwSwapBuffers((GLFWwindow*)window);
+
3726
+
3727 if( message_flag ){
+
3728 std::cout << "done." << std::endl;
+
3729 }
+
3730
+
3731}
+
3732
-
3733 setupPlot();
+
+
3733void Visualizer::plotDepthMap() {
3734
-
3735 //domain bounding box
-
3736 vec2 xbounds, ybounds, zbounds;
-
3737 getDomainBoundingBox( xbounds, ybounds, zbounds );
+
3735 if( message_flag ){
+
3736 std::cout << "Rendering depth map..." << std::flush;
+
3737 }
3738
-
3739 glm::vec3 view_center = glm::vec3( xbounds.x+0.5*(xbounds.y-xbounds.x), ybounds.x+0.5*(ybounds.y-ybounds.x), zbounds.x+0.5*(zbounds.y-zbounds.x) );
-
3740 float bound_R = 1.4f*0.5f*fmax(xbounds.y-xbounds.x,fmax(ybounds.y-ybounds.x,zbounds.y-zbounds.x));
-
3741
-
3742 glm::mat4 depthMVP;
+
3739 //Update the Context geometry (if needed)
+
3740 if( contextGeomNeedsUpdate ){
+
3741 buildContextGeometry_private();
+
3742 }
3743
-
3744 // Depth buffer for shadows
-
3745 glBindFramebuffer(GL_FRAMEBUFFER, framebufferID);
-
3746 //glViewport(0,0, 8192, 8192); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3747 //glViewport(0,0, Wdisplay, Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3748 glViewport(0,0,Wframebuffer,Hframebuffer);
+
3744 setupPlot();
+
3745
+
3746 //domain bounding box
+
3747 vec2 xbounds, ybounds, zbounds;
+
3748 getDomainBoundingBox( xbounds, ybounds, zbounds );
3749
-
3750 //bind depth texture
-
3751 glActiveTexture(GL_TEXTURE1);
-
3752 glBindTexture(GL_TEXTURE_2D, depthTexture);
-
3753 //glTexImage2D(GL_TEXTURE_2D, 0,GL_DEPTH_COMPONENT16, Wdisplay, Hdisplay, 0,GL_DEPTH_COMPONENT, GL_FLOAT, 0);
-
3754 glTexImage2D(GL_TEXTURE_2D, 0,GL_DEPTH_COMPONENT16, Wframebuffer, Hframebuffer, 0,GL_DEPTH_COMPONENT, GL_FLOAT, 0);
-
3755
-
3756 // Clear the screen
-
3757 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
-
3758
-
3759 depthShader.useShader();
+
3750 glm::vec3 view_center = glm::vec3( xbounds.x+0.5*(xbounds.y-xbounds.x), ybounds.x+0.5*(ybounds.y-ybounds.x), zbounds.x+0.5*(zbounds.y-zbounds.x) );
+
3751 float bound_R = 1.4f*0.5f*fmax(xbounds.y-xbounds.x,fmax(ybounds.y-ybounds.x,zbounds.y-zbounds.x));
+
3752
+
3753 glm::mat4 depthMVP;
+
3754
+
3755 // Depth buffer for shadows
+
3756 glBindFramebuffer(GL_FRAMEBUFFER, framebufferID);
+
3757 //glViewport(0,0, 8192, 8192); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3758 //glViewport(0,0, Wdisplay, Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3759 glViewport(0,0,Wframebuffer,Hframebuffer);
3760
-
3761 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
-
3762 depthShader.setTransformationMatrix( perspectiveTransformationMatrix );
-
3763
-
3764 depthShader.enableTextureMaps();
-
3765 depthShader.enableTextureMasks();
+
3761 //bind depth texture
+
3762 glActiveTexture(GL_TEXTURE1);
+
3763 glBindTexture(GL_TEXTURE_2D, depthTexture);
+
3764 //glTexImage2D(GL_TEXTURE_2D, 0,GL_DEPTH_COMPONENT16, Wdisplay, Hdisplay, 0,GL_DEPTH_COMPONENT, GL_FLOAT, 0);
+
3765 glTexImage2D(GL_TEXTURE_2D, 0,GL_DEPTH_COMPONENT16, Wframebuffer, Hframebuffer, 0,GL_DEPTH_COMPONENT, GL_FLOAT, 0);
3766
-
3767 render( 1 );
-
3768
-
3769 assert(checkerrors());
-
3770
-
3771 depth_buffer_data.resize( Wframebuffer*Hframebuffer );
-
3772
-
3773 glfwSwapBuffers((GLFWwindow*)window);
-
3774 glReadPixels(0, 0, Wframebuffer, Hframebuffer, GL_DEPTH_COMPONENT, GL_FLOAT, &depth_buffer_data[0] );
-
3775
-
3776 //depending on the active frame buffer, we may get all zero data and need to swap it again.
-
3777 bool zeros = true;
-
3778 for( int i=0; i<3*Wframebuffer*Hframebuffer; i++){
-
3779 if( depth_buffer_data[i]!=0 ){
-
3780 zeros = false;
-
3781 }
-
3782 }
-
3783 if( zeros ){
-
3784
-
3785 glfwSwapBuffers((GLFWwindow*)window);
+
3767 // Clear the screen
+
3768 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3769
+
3770 depthShader.useShader();
+
3771
+
3772 updatePerspectiveTransformation( camera_lookat_center, camera_eye_location );
+
3773 depthShader.setTransformationMatrix( perspectiveTransformationMatrix );
+
3774
+
3775 depthShader.enableTextureMaps();
+
3776 depthShader.enableTextureMasks();
+
3777
+
3778 render( 1 );
+
3779
+
3780 assert(checkerrors());
+
3781
+
3782 depth_buffer_data.resize( Wframebuffer*Hframebuffer );
+
3783
+
3784 glfwSwapBuffers((GLFWwindow*)window);
+
3785 glReadPixels(0, 0, Wframebuffer, Hframebuffer, GL_DEPTH_COMPONENT, GL_FLOAT, &depth_buffer_data[0] );
3786
-
3787 glReadPixels(0, 0, Wframebuffer, Hframebuffer, GL_DEPTH_COMPONENT, GL_FLOAT, &depth_buffer_data[0] );
-
3788
-
3789 }
-
3790
-
3791 assert(checkerrors());
-
3792
-
3793 glEnableVertexAttribArray(0); //position
-
3794 glEnableVertexAttribArray(1); //color
-
3795 glDisableVertexAttribArray(2); //normal
-
3796 glEnableVertexAttribArray(3); //uv
-
3797 glEnableVertexAttribArray(4); //texture flag
-
3798 glEnableVertexAttribArray(5); //coordinate flag
+
3787 //depending on the active frame buffer, we may get all zero data and need to swap it again.
+
3788 bool zeros = true;
+
3789 for( int i=0; i<3*Wframebuffer*Hframebuffer; i++){
+
3790 if( depth_buffer_data[i]!=0 ){
+
3791 zeros = false;
+
3792 }
+
3793 }
+
3794 if( zeros ){
+
3795
+
3796 glfwSwapBuffers((GLFWwindow*)window);
+
3797
+
3798 glReadPixels(0, 0, Wframebuffer, Hframebuffer, GL_DEPTH_COMPONENT, GL_FLOAT, &depth_buffer_data[0] );
3799
-
3800 std::vector<float> position_data, color_data, normal_data, uv_data;
-
3801 std::vector<int> coordinate_data, texture_data;
-
3802
-
3803 position_data.assign(12,0);
-
3804 color_data.assign(16,0);
-
3805 normal_data.assign(12,0);
-
3806 uv_data.assign(8,0);
-
3807 coordinate_data.assign(4,0);
-
3808 texture_data.assign(4,0);
-
3809
-
3810 position_data[0] = -1;
-
3811 position_data[1] = 1;
-
3812 position_data[2] = 0;
-
3813 uv_data[0] = 0;
-
3814 uv_data[1] = 1;
-
3815 color_data[0] = 1;
-
3816 color_data[1] = 0;
-
3817 color_data[2] = 0;
-
3818 color_data[3] = 1;
-
3819 texture_data[0] = 4;
-
3820 coordinate_data[0] = 0;
-
3821
-
3822 position_data[3] = 1;
-
3823 position_data[4] = 1;
-
3824 position_data[5] = 0;
-
3825 uv_data[2] = 1;
-
3826 uv_data[3] = 1;
-
3827 color_data[4] = 1;
-
3828 color_data[5] = 0;
-
3829 color_data[6] = 0;
-
3830 color_data[7] = 1;
-
3831 texture_data[1] = 4;
-
3832 coordinate_data[1] = 0;
-
3833
-
3834 position_data[6] = 1;
-
3835 position_data[7] = -1;
-
3836 position_data[8] = 0;
-
3837 uv_data[4] = 1;
-
3838 uv_data[5] = 0;
-
3839 color_data[8] = 1;
-
3840 color_data[9] = 0;
-
3841 color_data[10] = 0;
-
3842 color_data[11] = 1;
-
3843 texture_data[2] = 4;
-
3844 coordinate_data[2] = 0;
-
3845
-
3846 position_data[9] = -1;
-
3847 position_data[10] = -1;
-
3848 position_data[11] = 0;
-
3849 uv_data[6] = 0;
-
3850 uv_data[7] = 0;
-
3851 color_data[12] = 1;
-
3852 color_data[13] = 0;
-
3853 color_data[14] = 0;
-
3854 color_data[15] = 1;
-
3855 texture_data[3] = 4;
-
3856 coordinate_data[3] = 0;
-
3857
-
3858 // 1st attribute buffer : vertex positions
-
3859 glBindBuffer(GL_ARRAY_BUFFER, positionBuffer );
-
3860 glBufferData(GL_ARRAY_BUFFER, position_data.size()*sizeof(GLfloat), &position_data[0], GL_STATIC_DRAW);
-
3861 glVertexAttribPointer( 0, 3, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3862
-
3863 // 2nd attribute buffer : vertex colors
-
3864 glBindBuffer(GL_ARRAY_BUFFER, colorBuffer );
-
3865 glBufferData(GL_ARRAY_BUFFER, color_data.size()*sizeof(GLfloat), &color_data[0], GL_STATIC_DRAW);
-
3866 glVertexAttribPointer( 1, 4, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3867
-
3868 // 4th attribute buffer : vertex uv
-
3869 glBindBuffer(GL_ARRAY_BUFFER, uvBuffer );
-
3870 glBufferData(GL_ARRAY_BUFFER, uv_data.size()*sizeof(GLfloat), &uv_data[0], GL_STATIC_DRAW);
-
3871 glVertexAttribPointer( 3, 2, GL_FLOAT, GL_FALSE, 0, (void*)0 );
-
3872
-
3873 // 5th attribute buffer : vertex texture flag
-
3874 glBindBuffer(GL_ARRAY_BUFFER, textureFlagBuffer );
-
3875 glBufferData(GL_ARRAY_BUFFER, texture_data.size()*sizeof(GLint), &texture_data[0], GL_STATIC_DRAW);
-
3876 glVertexAttribIPointer( 4, 1, GL_INT, 0, (void*)0 );
-
3877
-
3878 // 6th attribute buffer : vertex coordinate flag
-
3879 glBindBuffer(GL_ARRAY_BUFFER, coordinateFlagBuffer );
-
3880 glBufferData(GL_ARRAY_BUFFER, coordinate_data.size()*sizeof(GLint), &coordinate_data[0], GL_STATIC_DRAW);
-
3881 glVertexAttribIPointer( 5, 1, GL_INT, 0, (void*)0 );
-
3882
+
3800 }
+
3801
+
3802 assert(checkerrors());
+
3803
+
3804 glEnableVertexAttribArray(0); //position
+
3805 glEnableVertexAttribArray(1); //color
+
3806 glDisableVertexAttribArray(2); //normal
+
3807 glEnableVertexAttribArray(3); //uv
+
3808 glEnableVertexAttribArray(4); //texture flag
+
3809 glEnableVertexAttribArray(5); //coordinate flag
+
3810
+
3811 std::vector<float> position_data, color_data, normal_data, uv_data;
+
3812 std::vector<int> coordinate_data, texture_data;
+
3813
+
3814 position_data.assign(12,0);
+
3815 color_data.assign(16,0);
+
3816 normal_data.assign(12,0);
+
3817 uv_data.assign(8,0);
+
3818 coordinate_data.assign(4,0);
+
3819 texture_data.assign(4,0);
+
3820
+
3821 position_data[0] = -1;
+
3822 position_data[1] = 1;
+
3823 position_data[2] = 0;
+
3824 uv_data[0] = 0;
+
3825 uv_data[1] = 1;
+
3826 color_data[0] = 1;
+
3827 color_data[1] = 0;
+
3828 color_data[2] = 0;
+
3829 color_data[3] = 1;
+
3830 texture_data[0] = 4;
+
3831 coordinate_data[0] = 0;
+
3832
+
3833 position_data[3] = 1;
+
3834 position_data[4] = 1;
+
3835 position_data[5] = 0;
+
3836 uv_data[2] = 1;
+
3837 uv_data[3] = 1;
+
3838 color_data[4] = 1;
+
3839 color_data[5] = 0;
+
3840 color_data[6] = 0;
+
3841 color_data[7] = 1;
+
3842 texture_data[1] = 4;
+
3843 coordinate_data[1] = 0;
+
3844
+
3845 position_data[6] = 1;
+
3846 position_data[7] = -1;
+
3847 position_data[8] = 0;
+
3848 uv_data[4] = 1;
+
3849 uv_data[5] = 0;
+
3850 color_data[8] = 1;
+
3851 color_data[9] = 0;
+
3852 color_data[10] = 0;
+
3853 color_data[11] = 1;
+
3854 texture_data[2] = 4;
+
3855 coordinate_data[2] = 0;
+
3856
+
3857 position_data[9] = -1;
+
3858 position_data[10] = -1;
+
3859 position_data[11] = 0;
+
3860 uv_data[6] = 0;
+
3861 uv_data[7] = 0;
+
3862 color_data[12] = 1;
+
3863 color_data[13] = 0;
+
3864 color_data[14] = 0;
+
3865 color_data[15] = 1;
+
3866 texture_data[3] = 4;
+
3867 coordinate_data[3] = 0;
+
3868
+
3869 // 1st attribute buffer : vertex positions
+
3870 glBindBuffer(GL_ARRAY_BUFFER, positionBuffer );
+
3871 glBufferData(GL_ARRAY_BUFFER, position_data.size()*sizeof(GLfloat), &position_data[0], GL_STATIC_DRAW);
+
3872 glVertexAttribPointer( 0, 3, GL_FLOAT, GL_FALSE, 0, (void*)0 );
+
3873
+
3874 // 2nd attribute buffer : vertex colors
+
3875 glBindBuffer(GL_ARRAY_BUFFER, colorBuffer );
+
3876 glBufferData(GL_ARRAY_BUFFER, color_data.size()*sizeof(GLfloat), &color_data[0], GL_STATIC_DRAW);
+
3877 glVertexAttribPointer( 1, 4, GL_FLOAT, GL_FALSE, 0, (void*)0 );
+
3878
+
3879 // 4th attribute buffer : vertex uv
+
3880 glBindBuffer(GL_ARRAY_BUFFER, uvBuffer );
+
3881 glBufferData(GL_ARRAY_BUFFER, uv_data.size()*sizeof(GLfloat), &uv_data[0], GL_STATIC_DRAW);
+
3882 glVertexAttribPointer( 3, 2, GL_FLOAT, GL_FALSE, 0, (void*)0 );
3883
-
3884 //do{
-
3885
-
3886 // Render to the screen
-
3887 glBindFramebuffer(GL_FRAMEBUFFER, 0);
-
3888 //glViewport(0,0,Wdisplay,Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
-
3889 glViewport(0,0,Wframebuffer,Hframebuffer);
-
3890
-
3891 glClearColor(0,0,0, 0.0f);
-
3892
-
3893 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3884 // 5th attribute buffer : vertex texture flag
+
3885 glBindBuffer(GL_ARRAY_BUFFER, textureFlagBuffer );
+
3886 glBufferData(GL_ARRAY_BUFFER, texture_data.size()*sizeof(GLint), &texture_data[0], GL_STATIC_DRAW);
+
3887 glVertexAttribIPointer( 4, 1, GL_INT, 0, (void*)0 );
+
3888
+
3889 // 6th attribute buffer : vertex coordinate flag
+
3890 glBindBuffer(GL_ARRAY_BUFFER, coordinateFlagBuffer );
+
3891 glBufferData(GL_ARRAY_BUFFER, coordinate_data.size()*sizeof(GLint), &coordinate_data[0], GL_STATIC_DRAW);
+
3892 glVertexAttribIPointer( 5, 1, GL_INT, 0, (void*)0 );
+
3893
3894
-
3895 primaryShader.useShader();
+
3895 //do{
3896
-
3897 primaryShader.enableTextureMaps();
-
3898 primaryShader.enableTextureMasks();
-
3899
-
3900 primaryShader.setLightingModel( LIGHTING_NONE );
+
3897 // Render to the screen
+
3898 glBindFramebuffer(GL_FRAMEBUFFER, 0);
+
3899 //glViewport(0,0,Wdisplay,Hdisplay); // Render on the whole framebuffer, complete from the lower left corner to the upper right
+
3900 glViewport(0,0,Wframebuffer,Hframebuffer);
3901
-
3902 glActiveTexture(GL_TEXTURE1);
-
3903 glBindTexture(GL_TEXTURE_2D, depthTexture);
-
3904
-
3905 glUniform1i(primaryShader.RboundUniform,bound_R);
-
3906
-
3907 glDrawArrays(GL_TRIANGLE_FAN, 0, 4 );
-
3908
-
3909 glfwSwapBuffers((GLFWwindow*)window);
+
3902 glClearColor(0,0,0, 0.0f);
+
3903
+
3904 glClear( GL_COLOR_BUFFER_BIT | GL_DEPTH_BUFFER_BIT );
+
3905
+
3906 primaryShader.useShader();
+
3907
+
3908 primaryShader.enableTextureMaps();
+
3909 primaryShader.enableTextureMasks();
3910
-
3911 //glfwWaitEvents();
-
3912 //}while( glfwGetKey((GLFWwindow*)window, GLFW_KEY_ESCAPE ) != GLFW_PRESS && glfwWindowShouldClose((GLFWwindow*)window) == 0 );
-
3913
-
3914 if( message_flag ){
-
3915 std::cout << "done." << std::endl;
-
3916 }
+
3911 primaryShader.setLightingModel( LIGHTING_NONE );
+
3912
+
3913 glActiveTexture(GL_TEXTURE1);
+
3914 glBindTexture(GL_TEXTURE_2D, depthTexture);
+
3915
+
3916 glUniform1i(primaryShader.RboundUniform,bound_R);
3917
-
3918}
+
3918 glDrawArrays(GL_TRIANGLE_FAN, 0, 4 );
3919
-
3920void Shader::initialize( const char* vertex_shader_file, const char* fragment_shader_file ){
+
3920 glfwSwapBuffers((GLFWwindow*)window);
3921
-
3922 // ~~~~~~~~~~~~~~~ COMPILE SHADERS ~~~~~~~~~~~~~~~~~~~~~~~~~//
-
3923
-
3924 assert(checkerrors());
-
3925
-
3926 // Create the shaders
-
3927 unsigned int VertexShaderID = glCreateShader(GL_VERTEX_SHADER);
-
3928 unsigned int FragmentShaderID = glCreateShader(GL_FRAGMENT_SHADER);
-
3929
-
3930 // Read the Vertex Shader code from the file
-
3931 std::string VertexShaderCode;
-
3932 std::ifstream VertexShaderStream(vertex_shader_file, std::ios::in);
-
3933 assert(VertexShaderStream.is_open());
-
3934 std::string Line = "";
-
3935 while(getline(VertexShaderStream, Line))
-
3936 VertexShaderCode += "\n" + Line;
-
3937 VertexShaderStream.close();
-
3938
-
3939 // Read the Fragment Shader code from the file
-
3940 std::string FragmentShaderCode;
-
3941 std::ifstream FragmentShaderStream(fragment_shader_file, std::ios::in);
-
3942 assert(FragmentShaderStream.is_open());
-
3943 Line = "";
-
3944 while(getline(FragmentShaderStream, Line))
-
3945 FragmentShaderCode += "\n" + Line;
-
3946 FragmentShaderStream.close();
-
3947
-
3948 int Result = GL_FALSE;
-
3949 int InfoLogLength;
-
3950
-
3951 // Compile Vertex Shader
-
3952 char const * VertexSourcePointer = VertexShaderCode.c_str();
-
3953 glShaderSource(VertexShaderID, 1, &VertexSourcePointer , NULL);
-
3954 glCompileShader(VertexShaderID);
-
3955
-
3956 assert(checkerrors());
-
3957
-
3958 // Check Vertex Shader
-
3959 glGetShaderiv(VertexShaderID, GL_COMPILE_STATUS, &Result);
-
3960 glGetShaderiv(VertexShaderID, GL_INFO_LOG_LENGTH, &InfoLogLength);
-
3961 std::vector<char> VertexShaderErrorMessage(InfoLogLength);
-
3962 if( !VertexShaderErrorMessage.empty() ) {
-
3963 glGetShaderInfoLog(VertexShaderID, InfoLogLength, NULL, &VertexShaderErrorMessage[0]);
-
3964 }
-
3965 int success = 0;
-
3966 glGetShaderiv(VertexShaderID, GL_COMPILE_STATUS, &success);
-
3967 if( success==GL_FALSE ){
-
3968 fprintf(stderr, "%s\n", &VertexShaderErrorMessage[0]);
-
3969 throw(1);
-
3970 }
-
3971
-
3972 // Compile Fragment Shader
-
3973 char const * FragmentSourcePointer = FragmentShaderCode.c_str();
-
3974 glShaderSource(FragmentShaderID, 1, &FragmentSourcePointer , NULL);
-
3975 glCompileShader(FragmentShaderID);
-
3976
-
3977 assert(checkerrors());
-
3978
-
3979 // Check Fragment Shader
-
3980 glGetShaderiv(FragmentShaderID, GL_COMPILE_STATUS, &Result);
-
3981 glGetShaderiv(FragmentShaderID, GL_INFO_LOG_LENGTH, &InfoLogLength);
-
3982 std::vector<char> FragmentShaderErrorMessage(InfoLogLength);
-
3983 if( !VertexShaderErrorMessage.empty() ) {
-
3984 glGetShaderInfoLog(FragmentShaderID, InfoLogLength, NULL, &FragmentShaderErrorMessage[0]);
-
3985 }
-
3986 success = 0;
-
3987 glGetShaderiv(FragmentShaderID, GL_COMPILE_STATUS, &success);
-
3988 if( success==GL_FALSE ){
-
3989 fprintf(stderr, "%s\n", &FragmentShaderErrorMessage[0]);
-
3990 throw(1);
-
3991 }
-
3992
-
3993 // Link the program
-
3994 shaderID = glCreateProgram();
-
3995 glAttachShader(shaderID, VertexShaderID);
-
3996 glAttachShader(shaderID, FragmentShaderID);
-
3997 glLinkProgram(shaderID);
-
3998
-
3999 assert(checkerrors());
-
4000
-
4001 // Check the program
-
4002 glGetProgramiv(shaderID, GL_LINK_STATUS, &Result);
-
4003 glGetProgramiv(shaderID, GL_INFO_LOG_LENGTH, &InfoLogLength);
-
4004 std::vector<char> ProgramErrorMessage( std::max(InfoLogLength, int(1)) );
-
4005 glGetProgramInfoLog(shaderID, InfoLogLength, NULL, &ProgramErrorMessage[0]);
-
4006 if( isspace( ProgramErrorMessage[0] ) ){
-
4007 fprintf(stderr, "%s\n", &ProgramErrorMessage[0]);
-
4008 throw(1);
-
4009 }
-
4010
-
4011 assert(checkerrors());
-
4012
-
4013 glDeleteShader(VertexShaderID);
-
4014 glDeleteShader(FragmentShaderID);
-
4015
-
4016 assert(checkerrors());
-
4017
-
4018 glUseProgram(shaderID);
-
4019
-
4020 assert(checkerrors());
+
3922 //glfwWaitEvents();
+
3923 //}while( glfwGetKey((GLFWwindow*)window, GLFW_KEY_ESCAPE ) != GLFW_PRESS && glfwWindowShouldClose((GLFWwindow*)window) == 0 );
+
3924
+
3925 if( message_flag ){
+
3926 std::cout << "done." << std::endl;
+
3927 }
+
3928
+
3929}
+
+
3930
+
+
3931void Shader::initialize( const char* vertex_shader_file, const char* fragment_shader_file ){
+
3932
+
3933 // ~~~~~~~~~~~~~~~ COMPILE SHADERS ~~~~~~~~~~~~~~~~~~~~~~~~~//
+
3934
+
3935 assert(checkerrors());
+
3936
+
3937 // Create the shaders
+
3938 unsigned int VertexShaderID = glCreateShader(GL_VERTEX_SHADER);
+
3939 unsigned int FragmentShaderID = glCreateShader(GL_FRAGMENT_SHADER);
+
3940
+
3941 // Read the Vertex Shader code from the file
+
3942 std::string VertexShaderCode;
+
3943 std::ifstream VertexShaderStream(vertex_shader_file, std::ios::in);
+
3944 assert(VertexShaderStream.is_open());
+
3945 std::string Line = "";
+
3946 while(getline(VertexShaderStream, Line))
+
3947 VertexShaderCode += "\n" + Line;
+
3948 VertexShaderStream.close();
+
3949
+
3950 // Read the Fragment Shader code from the file
+
3951 std::string FragmentShaderCode;
+
3952 std::ifstream FragmentShaderStream(fragment_shader_file, std::ios::in);
+
3953 assert(FragmentShaderStream.is_open());
+
3954 Line = "";
+
3955 while(getline(FragmentShaderStream, Line))
+
3956 FragmentShaderCode += "\n" + Line;
+
3957 FragmentShaderStream.close();
+
3958
+
3959 int Result = GL_FALSE;
+
3960 int InfoLogLength;
+
3961
+
3962 // Compile Vertex Shader
+
3963 char const * VertexSourcePointer = VertexShaderCode.c_str();
+
3964 glShaderSource(VertexShaderID, 1, &VertexSourcePointer , NULL);
+
3965 glCompileShader(VertexShaderID);
+
3966
+
3967 assert(checkerrors());
+
3968
+
3969 // Check Vertex Shader
+
3970 glGetShaderiv(VertexShaderID, GL_COMPILE_STATUS, &Result);
+
3971 glGetShaderiv(VertexShaderID, GL_INFO_LOG_LENGTH, &InfoLogLength);
+
3972 std::vector<char> VertexShaderErrorMessage(InfoLogLength);
+
3973 if( !VertexShaderErrorMessage.empty() ) {
+
3974 glGetShaderInfoLog(VertexShaderID, InfoLogLength, NULL, &VertexShaderErrorMessage[0]);
+
3975 }
+
3976 int success = 0;
+
3977 glGetShaderiv(VertexShaderID, GL_COMPILE_STATUS, &success);
+
3978 if( success==GL_FALSE ){
+
3979 fprintf(stderr, "%s\n", &VertexShaderErrorMessage[0]);
+
3980 throw(1);
+
3981 }
+
3982
+
3983 // Compile Fragment Shader
+
3984 char const * FragmentSourcePointer = FragmentShaderCode.c_str();
+
3985 glShaderSource(FragmentShaderID, 1, &FragmentSourcePointer , NULL);
+
3986 glCompileShader(FragmentShaderID);
+
3987
+
3988 assert(checkerrors());
+
3989
+
3990 // Check Fragment Shader
+
3991 glGetShaderiv(FragmentShaderID, GL_COMPILE_STATUS, &Result);
+
3992 glGetShaderiv(FragmentShaderID, GL_INFO_LOG_LENGTH, &InfoLogLength);
+
3993 std::vector<char> FragmentShaderErrorMessage(InfoLogLength);
+
3994 if( !VertexShaderErrorMessage.empty() ) {
+
3995 glGetShaderInfoLog(FragmentShaderID, InfoLogLength, NULL, &FragmentShaderErrorMessage[0]);
+
3996 }
+
3997 success = 0;
+
3998 glGetShaderiv(FragmentShaderID, GL_COMPILE_STATUS, &success);
+
3999 if( success==GL_FALSE ){
+
4000 fprintf(stderr, "%s\n", &FragmentShaderErrorMessage[0]);
+
4001 throw(1);
+
4002 }
+
4003
+
4004 // Link the program
+
4005 shaderID = glCreateProgram();
+
4006 glAttachShader(shaderID, VertexShaderID);
+
4007 glAttachShader(shaderID, FragmentShaderID);
+
4008 glLinkProgram(shaderID);
+
4009
+
4010 assert(checkerrors());
+
4011
+
4012 // Check the program
+
4013 glGetProgramiv(shaderID, GL_LINK_STATUS, &Result);
+
4014 glGetProgramiv(shaderID, GL_INFO_LOG_LENGTH, &InfoLogLength);
+
4015 std::vector<char> ProgramErrorMessage( std::max(InfoLogLength, int(1)) );
+
4016 glGetProgramInfoLog(shaderID, InfoLogLength, NULL, &ProgramErrorMessage[0]);
+
4017 if( isspace( ProgramErrorMessage[0] ) ){
+
4018 fprintf(stderr, "%s\n", &ProgramErrorMessage[0]);
+
4019 throw(1);
+
4020 }
4021
-
4022 // ~~~~~~~~~~~ Create a Vertex Array Object (VAO) ~~~~~~~~~~//
-
4023 glGenVertexArrays(1, &VertexArrayID);
-
4024 glBindVertexArray(VertexArrayID);
-
4025
-
4026 assert(checkerrors());
-
4027
-
4028 // ~~~~~~~~~~~ Primary Shader Uniforms ~~~~~~~~~~//
-
4029
-
4030 //Transformation Matrix
-
4031 transformMatrixUniform = glGetUniformLocation(shaderID, "MVP");
+
4022 assert(checkerrors());
+
4023
+
4024 glDeleteShader(VertexShaderID);
+
4025 glDeleteShader(FragmentShaderID);
+
4026
+
4027 assert(checkerrors());
+
4028
+
4029 glUseProgram(shaderID);
+
4030
+
4031 assert(checkerrors());
4032
-
4033 //Depth Bias Matrix (for shadows)
-
4034 depthBiasUniform = glGetUniformLocation(shaderID, "DepthBiasMVP");
-
4035
-
4036 //Texture Sampler
-
4037 textureUniform = glGetUniformLocation(shaderID, "textureSampler");
-
4038 glUniform1i(textureUniform,0); //tell shader we are using GL_TEXTURE0
-
4039
-
4040 //Shadow Map Sampler
-
4041 shadowmapUniform = glGetUniformLocation(shaderID, "shadowMap");
-
4042 glUniform1i(shadowmapUniform, 1);
+
4033 // ~~~~~~~~~~~ Create a Vertex Array Object (VAO) ~~~~~~~~~~//
+
4034 glGenVertexArrays(1, &VertexArrayID);
+
4035 glBindVertexArray(VertexArrayID);
+
4036
+
4037 assert(checkerrors());
+
4038
+
4039 // ~~~~~~~~~~~ Primary Shader Uniforms ~~~~~~~~~~//
+
4040
+
4041 //Transformation Matrix
+
4042 transformMatrixUniform = glGetUniformLocation(shaderID, "MVP");
4043
-
4044 //Flag to tell how to shade fragments. See also: setTextureMap, setMaskTexture, disableTextures
-
4045 //textureFlagUniform = glGetUniformLocation(shaderID, "textureFlag");
-
4046 //glUniform1i(textureFlagUniform,0); //Default is zero, which is to disable textures
-
4047
-
4048 //Unit vector in the direction of the light (sun)
-
4049 lightDirectionUniform = glGetUniformLocation(shaderID, "lightDirection" );
-
4050 glUniform3f( lightDirectionUniform, 0, 0, 1 ); //Default is directly above
-
4051
-
4052 //Lighting model used for shading primitives
-
4053 lightingModelUniform = glGetUniformLocation(shaderID, "lightingModel" );
-
4054 glUniform1i( lightingModelUniform, 0 ); //Default is none
-
4055
-
4056 RboundUniform = glGetUniformLocation(shaderID, "Rbound");
-
4057 glUniform1i(RboundUniform,0);
+
4044 //Depth Bias Matrix (for shadows)
+
4045 depthBiasUniform = glGetUniformLocation(shaderID, "DepthBiasMVP");
+
4046
+
4047 //Texture Sampler
+
4048 textureUniform = glGetUniformLocation(shaderID, "textureSampler");
+
4049 glUniform1i(textureUniform,0); //tell shader we are using GL_TEXTURE0
+
4050
+
4051 //Shadow Map Sampler
+
4052 shadowmapUniform = glGetUniformLocation(shaderID, "shadowMap");
+
4053 glUniform1i(shadowmapUniform, 1);
+
4054
+
4055 //Flag to tell how to shade fragments. See also: setTextureMap, setMaskTexture, disableTextures
+
4056 //textureFlagUniform = glGetUniformLocation(shaderID, "textureFlag");
+
4057 //glUniform1i(textureFlagUniform,0); //Default is zero, which is to disable textures
4058
-
4059 //Lighting intensity factor
-
4060 lightIntensityUniform = glGetUniformLocation(shaderID, "lightIntensity" );
-
4061 glUniform1f( lightIntensityUniform, 1.f );
+
4059 //Unit vector in the direction of the light (sun)
+
4060 lightDirectionUniform = glGetUniformLocation(shaderID, "lightDirection" );
+
4061 glUniform3f( lightDirectionUniform, 0, 0, 1 ); //Default is directly above
4062
-
4063 //initialize default texture in case none are added to the scene
-
4064 glBindTexture(GL_TEXTURE_RECTANGLE,0);
-
4065 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RGBA, 1, 1, 0, GL_RGBA, GL_UNSIGNED_BYTE, nullptr);
+
4063 //Lighting model used for shading primitives
+
4064 lightingModelUniform = glGetUniformLocation(shaderID, "lightingModel" );
+
4065 glUniform1i( lightingModelUniform, 0 ); //Default is none
4066
-
4067 assert(checkerrors());
-
4068
-
4069}
-
4070
-
4071Shader::~Shader( void ){
-
4072 glDeleteVertexArrays( 1, &VertexArrayID);
-
4073 glDeleteProgram(shaderID);
-
4074}
-
4075
-
4076void Shader::disableTextures() const{
-
4077 glEnable(GL_BLEND);
-
4078 glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);
-
4079}
-
4080
-
4081void Shader::setTextureMap( const char* texture_file, uint& textureID, int2& texture_size ){
-
4082
-
4083 //Check if the file exists
-
4084 std::ifstream f(texture_file);
-
4085 assert( f.good() );
-
4086 f.close();
-
4087
-
4088 //Check if this texture has already been added to the shader
-
4089 //Note: if the texture_file is empy, it will automatically load a new texture
-
4090 for( uint i=0; i<textureMapFiles.size(); i++ ){
-
4091 if( textureMapFiles.at(i)==texture_file && strlen(texture_file)>0 ){
-
4092 textureID = textureMaps.at(i); //copy the handle
-
4093 texture_size = textureSizes.at(i); //copy the size
-
4094 return;
-
4095 }
-
4096 }
-
4097
-
4098 //--- Load the Texture ----//
-
4099
-
4100 int Nchannels=3;
-
4101 std::vector<unsigned char> texture;
-
4102 uint texture_height, texture_width;
-
4103 std::string file = texture_file;
-
4104 if(file.substr(file.find_last_of('.') + 1) == "jpg" || file.substr(file.find_last_of('.') + 1) == "jpeg" ){
-
4105 read_JPEG_file (texture_file,texture,texture_height,texture_width);
-
4106 } else if(file.substr(file.find_last_of('.') + 1) == "png") {
-
4107 read_png_file (texture_file,texture,texture_height,texture_width);
-
4108 }else {
-
4109 assert(false);
-
4110 }
-
4111
-
4112 texture_size = make_int2( texture_width, texture_height );
-
4113
-
4114 //Find next power of two up from size
-
4115 int POT = 0;
-
4116 while( pow(2,POT)<texture_size.x ){
-
4117 POT++;
-
4118 }
-
4119 int2 texture_size_POT = make_int2( int(pow(2,POT)), texture_size.y );
-
4120
-
4121 //OpenGL is a pain, so we need to pad the first dimension of the texture so that it size is a power of two
-
4122 std::vector<unsigned char> texture_;
-
4123 texture_.resize(texture_size_POT.y*texture_size_POT.x*4);
-
4124 for( int i=0; i<texture_size_POT.y*texture_size_POT.x*4; i++ ){
-
4125 texture_.at(i) = 0;
-
4126 }
-
4127 for(int j=0;j<texture_size.y;j++){
-
4128 for(int i=0;i<texture_size.x;i++){
-
4129 for( int c=0; c<4; c++ ){
-
4130 texture_[c+i*4+j*texture_size_POT.x*4] = texture[ c + i*4 + j*texture_size.x*4 ];
-
4131 }
-
4132 }
-
4133 }
-
4134 for(int j=texture_size.y-1; j<texture_size_POT.y; j++){
-
4135 for(int i=texture_size.x-1; i<texture_size_POT.x; i++){
-
4136 for( int c=0; c<4; c++ ){
-
4137 texture_[c+i*4+j*texture_size_POT.x*4] = 255.f;
-
4138 }
-
4139 }
-
4140 }
-
4141
-
4142 unsigned char* texture_ptr = &texture_[0];
-
4143
-
4144 glGenTextures(1, &textureID);
-
4145
-
4146 glActiveTexture(GL_TEXTURE0);
-
4147 glBindTexture(GL_TEXTURE_RECTANGLE,textureID);
-
4148 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RGBA, texture_size_POT.x, texture_size_POT.y, 0, GL_RGBA, GL_UNSIGNED_BYTE, texture_ptr);
-
4149 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4150 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4151 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
-
4152 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
-
4153
-
4154 textureMaps.push_back(textureID);
-
4155 textureSizes.push_back(texture_size);
-
4156 textureMapFiles.push_back(texture_file);
-
4157
-
4158}
-
4159
-
4160void Shader::enableTextureMaps() const{
-
4161 glActiveTexture(GL_TEXTURE0);
-
4162 glUniform1i(textureUniform,0);
-
4163 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_LINEAR);
-
4164 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_LINEAR);
-
4165 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4166 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4167 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4168 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4169 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
-
4170 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
-
4171 glEnable(GL_BLEND);
-
4172 glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);
-
4173}
-
4174
-
4175
-
4176void Shader::setTextureMask( const Glyph* glyph, uint& textureID ){
-
4177
-
4178 int2 texture_size = glyph->size;
-
4179
-
4180 //Check if this texture has already been added to the shader
-
4181 for( uint i=0; i<textureMaskFiles.size(); i++ ){
-
4182 if( textureMaskFiles.at(i).compare(glyph->filename)==0 ){
-
4183 textureID = textureMasks.at(i); //copy the handle
-
4184 return;
-
4185 }
-
4186 }
-
4187
-
4188 //OpenGL is a pain, so we need to pad the first dimension of the texture so that it size is a power of two
-
4189 int POT = 0;
-
4190 while( pow(2,POT)<texture_size.x ){
-
4191 POT++;
-
4192 }
-
4193 int2 texture_size_POT = make_int2( pow(2,POT), texture_size.y );
-
4194
-
4195 std::vector<unsigned char> texture(texture_size_POT.x*texture_size_POT.y);
-
4196 for(int j=0;j<texture_size.y;j++){
-
4197 for(int i=0;i<texture_size.x;i++){
-
4198 texture[i+j*texture_size_POT.x]=glyph->data.at(j).at(i);
-
4199 }
-
4200 }
-
4201 unsigned char* texture_ptr = &texture[0];
-
4202
-
4203 glGenTextures(1, &textureID);
-
4204
-
4205 glActiveTexture(GL_TEXTURE0);
-
4206 glBindTexture(GL_TEXTURE_RECTANGLE,textureID);
-
4207 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RED, texture_size_POT.x, texture_size_POT.y, 0, GL_RED, GL_UNSIGNED_BYTE, texture_ptr);
-
4208 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4209 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4210 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
-
4211 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
-
4212
-
4213 if( strlen(glyph->filename)>0 ){
-
4214 textureMasks.push_back(textureID);
-
4215 textureMaskFiles.push_back(glyph->filename);
-
4216 }
-
4217
-
4218}
-
4219
-
4220void Shader::setTextureMask( const char* texture_file, uint& textureID, int2& texture_size ){
-
4221
-
4222 //Check if this texture has already been added to the shader
-
4223 //Note: if the texture_file is empy, it will automatically load a new texture
-
4224 for( uint i=0; i<textureMapFiles.size(); i++ ){
-
4225 if( textureMapFiles.at(i).compare(texture_file)==0 && strlen(texture_file)>0 ){
-
4226 textureID = textureMaps.at(i); //copy the handle
-
4227 texture_size = textureSizes.at(i); //copy the size
-
4228 return;
-
4229 }
-
4230 }
-
4231
-
4232 //--- Load the Texture ----//
-
4233
-
4234 int Nchannels=3;
-
4235 std::vector<unsigned char> texture;
-
4236 uint texture_height, texture_width;
-
4237 std::string file = texture_file;
-
4238 if(file.substr(file.find_last_of(".") + 1) == "png") {
-
4239 read_png_file (texture_file,texture,texture_height,texture_width);
-
4240 }else {
-
4241 std::cerr << "ERROR: texture mask file " << texture_file << " must be a PNG image." << std::endl;
-
4242 }
-
4243
-
4244 texture_size = make_int2( texture_width, texture_height );
-
4245
-
4246 //Find next power of two up from size
-
4247 int POT = 0;
-
4248 while( pow(2,POT)<texture_size.x ){
-
4249 POT++;
-
4250 }
-
4251 int2 texture_size_POT = make_int2( int(pow(2,POT)), texture_size.y );
-
4252
-
4253 //OpenGL is a pain, so we need to pad the first dimension of the texture so that it size is a power of two
-
4254 std::vector<unsigned char> texture_;
-
4255 texture_.assign(texture_size_POT.y*texture_size_POT.x,0);
-
4256 for(int j=0;j<texture_size.y;j++){
-
4257 for(int i=0;i<texture_size.x;i++){
-
4258 texture_[j*texture_size_POT.x+i] = texture[ 3 + i*4 + j*texture_size.x*4 ];
-
4259 }
-
4260 }
-
4261
-
4262 unsigned char* texture_ptr = &texture_[0];
+
4067 RboundUniform = glGetUniformLocation(shaderID, "Rbound");
+
4068 glUniform1i(RboundUniform,0);
+
4069
+
4070 //Lighting intensity factor
+
4071 lightIntensityUniform = glGetUniformLocation(shaderID, "lightIntensity" );
+
4072 glUniform1f( lightIntensityUniform, 1.f );
+
4073
+
4074 //initialize default texture in case none are added to the scene
+
4075 glBindTexture(GL_TEXTURE_RECTANGLE,0);
+
4076 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RGBA, 1, 1, 0, GL_RGBA, GL_UNSIGNED_BYTE, nullptr);
+
4077
+
4078 assert(checkerrors());
+
4079
+
4080}
+
+
4081
+
4082Shader::~Shader( void ){
+
4083 glDeleteVertexArrays( 1, &VertexArrayID);
+
4084 glDeleteProgram(shaderID);
+
4085}
+
4086
+
+
4087void Shader::disableTextures() const{
+
4088 glEnable(GL_BLEND);
+
4089 glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);
+
4090}
+
+
4091
+
+
4092void Shader::setTextureMap( const char* texture_file, uint& textureID, int2& texture_size ){
+
4093
+
4094 //Check if the file exists
+
4095 std::ifstream f(texture_file);
+
4096 assert( f.good() );
+
4097 f.close();
+
4098
+
4099 //Check if this texture has already been added to the shader
+
4100 //Note: if the texture_file is empy, it will automatically load a new texture
+
4101 for( uint i=0; i<textureMapFiles.size(); i++ ){
+
4102 if( textureMapFiles.at(i)==texture_file && strlen(texture_file)>0 ){
+
4103 textureID = textureMaps.at(i); //copy the handle
+
4104 texture_size = textureSizes.at(i); //copy the size
+
4105 return;
+
4106 }
+
4107 }
+
4108
+
4109 //--- Load the Texture ----//
+
4110
+
4111 int Nchannels=3;
+
4112 std::vector<unsigned char> texture;
+
4113 uint texture_height, texture_width;
+
4114 std::string file = texture_file;
+
4115 if(file.substr(file.find_last_of('.') + 1) == "jpg" || file.substr(file.find_last_of('.') + 1) == "jpeg" ){
+
4116 read_JPEG_file (texture_file,texture,texture_height,texture_width);
+
4117 } else if(file.substr(file.find_last_of('.') + 1) == "png") {
+
4118 read_png_file (texture_file,texture,texture_height,texture_width);
+
4119 }else {
+
4120 assert(false);
+
4121 }
+
4122
+
4123 texture_size = make_int2( texture_width, texture_height );
+
4124
+
4125 //Find next power of two up from size
+
4126 int POT = 0;
+
4127 while( pow(2,POT)<texture_size.x ){
+
4128 POT++;
+
4129 }
+
4130 int2 texture_size_POT = make_int2( int(pow(2,POT)), texture_size.y );
+
4131
+
4132 //OpenGL is a pain, so we need to pad the first dimension of the texture so that it size is a power of two
+
4133 std::vector<unsigned char> texture_;
+
4134 texture_.resize(texture_size_POT.y*texture_size_POT.x*4);
+
4135 for( int i=0; i<texture_size_POT.y*texture_size_POT.x*4; i++ ){
+
4136 texture_.at(i) = 0;
+
4137 }
+
4138 for(int j=0;j<texture_size.y;j++){
+
4139 for(int i=0;i<texture_size.x;i++){
+
4140 for( int c=0; c<4; c++ ){
+
4141 texture_[c+i*4+j*texture_size_POT.x*4] = texture[ c + i*4 + j*texture_size.x*4 ];
+
4142 }
+
4143 }
+
4144 }
+
4145 for(int j=texture_size.y-1; j<texture_size_POT.y; j++){
+
4146 for(int i=texture_size.x-1; i<texture_size_POT.x; i++){
+
4147 for( int c=0; c<4; c++ ){
+
4148 texture_[c+i*4+j*texture_size_POT.x*4] = 255.f;
+
4149 }
+
4150 }
+
4151 }
+
4152
+
4153 unsigned char* texture_ptr = &texture_[0];
+
4154
+
4155 glGenTextures(1, &textureID);
+
4156
+
4157 glActiveTexture(GL_TEXTURE0);
+
4158 glBindTexture(GL_TEXTURE_RECTANGLE,textureID);
+
4159 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RGBA, texture_size_POT.x, texture_size_POT.y, 0, GL_RGBA, GL_UNSIGNED_BYTE, texture_ptr);
+
4160 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4161 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4162 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
+
4163 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
+
4164
+
4165 textureMaps.push_back(textureID);
+
4166 textureSizes.push_back(texture_size);
+
4167 textureMapFiles.push_back(texture_file);
+
4168
+
4169}
+
+
4170
+
+
4171void Shader::enableTextureMaps() const{
+
4172 glActiveTexture(GL_TEXTURE0);
+
4173 glUniform1i(textureUniform,0);
+
4174 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_LINEAR);
+
4175 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_LINEAR);
+
4176 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4177 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4178 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4179 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4180 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
+
4181 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
+
4182 glEnable(GL_BLEND);
+
4183 glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);
+
4184}
+
+
4185
+
4186
+
+
4187void Shader::setTextureMask( const Glyph* glyph, uint& textureID ){
+
4188
+
4189 int2 texture_size = glyph->size;
+
4190
+
4191 //Check if this texture has already been added to the shader
+
4192 for( uint i=0; i<textureMaskFiles.size(); i++ ){
+
4193 if( textureMaskFiles.at(i).compare(glyph->filename)==0 ){
+
4194 textureID = textureMasks.at(i); //copy the handle
+
4195 return;
+
4196 }
+
4197 }
+
4198
+
4199 //OpenGL is a pain, so we need to pad the first dimension of the texture so that it size is a power of two
+
4200 int POT = 0;
+
4201 while( pow(2,POT)<texture_size.x ){
+
4202 POT++;
+
4203 }
+
4204 int2 texture_size_POT = make_int2( pow(2,POT), texture_size.y );
+
4205
+
4206 std::vector<unsigned char> texture(texture_size_POT.x*texture_size_POT.y);
+
4207 for(int j=0;j<texture_size.y;j++){
+
4208 for(int i=0;i<texture_size.x;i++){
+
4209 texture[i+j*texture_size_POT.x]=glyph->data.at(j).at(i);
+
4210 }
+
4211 }
+
4212 unsigned char* texture_ptr = &texture[0];
+
4213
+
4214 glGenTextures(1, &textureID);
+
4215
+
4216 glActiveTexture(GL_TEXTURE0);
+
4217 glBindTexture(GL_TEXTURE_RECTANGLE,textureID);
+
4218 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RED, texture_size_POT.x, texture_size_POT.y, 0, GL_RED, GL_UNSIGNED_BYTE, texture_ptr);
+
4219 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4220 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4221 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
+
4222 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
+
4223
+
4224 if( strlen(glyph->filename)>0 ){
+
4225 textureMasks.push_back(textureID);
+
4226 textureMaskFiles.push_back(glyph->filename);
+
4227 }
+
4228
+
4229}
+
+
4230
+
+
4231void Shader::setTextureMask( const char* texture_file, uint& textureID, int2& texture_size ){
+
4232
+
4233 //Check if this texture has already been added to the shader
+
4234 //Note: if the texture_file is empy, it will automatically load a new texture
+
4235 for( uint i=0; i<textureMapFiles.size(); i++ ){
+
4236 if( textureMapFiles.at(i).compare(texture_file)==0 && strlen(texture_file)>0 ){
+
4237 textureID = textureMaps.at(i); //copy the handle
+
4238 texture_size = textureSizes.at(i); //copy the size
+
4239 return;
+
4240 }
+
4241 }
+
4242
+
4243 //--- Load the Texture ----//
+
4244
+
4245 int Nchannels=3;
+
4246 std::vector<unsigned char> texture;
+
4247 uint texture_height, texture_width;
+
4248 std::string file = texture_file;
+
4249 if(file.substr(file.find_last_of(".") + 1) == "png") {
+
4250 read_png_file (texture_file,texture,texture_height,texture_width);
+
4251 }else {
+
4252 std::cerr << "ERROR: texture mask file " << texture_file << " must be a PNG image." << std::endl;
+
4253 }
+
4254
+
4255 texture_size = make_int2( texture_width, texture_height );
+
4256
+
4257 //Find next power of two up from size
+
4258 int POT = 0;
+
4259 while( pow(2,POT)<texture_size.x ){
+
4260 POT++;
+
4261 }
+
4262 int2 texture_size_POT = make_int2( int(pow(2,POT)), texture_size.y );
4263
-
4264 glGenTextures(1, &textureID);
-
4265
-
4266 glActiveTexture(GL_TEXTURE0);
-
4267 glBindTexture(GL_TEXTURE_RECTANGLE,textureID);
-
4268 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RED, texture_size_POT.x, texture_size_POT.y, 0, GL_RED, GL_UNSIGNED_BYTE, texture_ptr);
-
4269 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4270 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4271 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
-
4272 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
-
4273
-
4274 textureMaps.push_back(textureID);
-
4275 textureSizes.push_back(texture_size);
-
4276 textureMapFiles.push_back(texture_file);
-
4277
-
4278}
-
4279
-
4280void Shader::enableTextureMasks() const{
-
4281 glActiveTexture(GL_TEXTURE0);
-
4282 glUniform1i(textureUniform,0);
-
4283 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_LINEAR);
-
4284 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_LINEAR);
-
4285 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4286 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4287 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
-
4288 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
-
4289 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
-
4290 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
-
4291 glEnable(GL_BLEND);
-
4292 glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);
-
4293}
-
4294
-
4295void Shader::setTransformationMatrix(const glm::mat4 &matrix ) const{
-
4296 glUniformMatrix4fv(transformMatrixUniform, 1, GL_FALSE, &matrix[0][0]);
-
4297}
-
4298
-
4299void Shader::setDepthBiasMatrix(const glm::mat4 &matrix ) const{
-
4300 glUniformMatrix4fv(depthBiasUniform, 1, GL_FALSE, &matrix[0][0]);
-
4301}
-
4302
-
4303void Shader::setLightDirection(const helios::vec3 &direction ) const{
-
4304 glUniform3f( lightDirectionUniform, direction.x, direction.y, direction.z );
-
4305}
-
4306
-
4307void Shader::setLightingModel( uint lightingmodel ) const{
-
4308 glUniform1i( lightingModelUniform, lightingmodel );
-
4309}
-
4310
-
4311void Shader::setLightIntensity( float lightintensity ) const{
-
4312 glUniform1f( lightIntensityUniform, lightintensity );
-
4313}
-
4314
-
4315void Shader::useShader() const {
-
4316 glUseProgram(shaderID);
-
4317}
-
4318
-
4319void Visualizer::getViewKeystrokes( vec3& eye, vec3& center ){
-
4320
+
4264 //OpenGL is a pain, so we need to pad the first dimension of the texture so that it size is a power of two
+
4265 std::vector<unsigned char> texture_;
+
4266 texture_.assign(texture_size_POT.y*texture_size_POT.x,0);
+
4267 for(int j=0;j<texture_size.y;j++){
+
4268 for(int i=0;i<texture_size.x;i++){
+
4269 texture_[j*texture_size_POT.x+i] = texture[ 3 + i*4 + j*texture_size.x*4 ];
+
4270 }
+
4271 }
+
4272
+
4273 unsigned char* texture_ptr = &texture_[0];
+
4274
+
4275 glGenTextures(1, &textureID);
+
4276
+
4277 glActiveTexture(GL_TEXTURE0);
+
4278 glBindTexture(GL_TEXTURE_RECTANGLE,textureID);
+
4279 glTexImage2D(GL_TEXTURE_RECTANGLE, 0,GL_RED, texture_size_POT.x, texture_size_POT.y, 0, GL_RED, GL_UNSIGNED_BYTE, texture_ptr);
+
4280 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4281 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4282 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
+
4283 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
+
4284
+
4285 textureMaps.push_back(textureID);
+
4286 textureSizes.push_back(texture_size);
+
4287 textureMapFiles.push_back(texture_file);
+
4288
+
4289}
+
+
4290
+
+
4291void Shader::enableTextureMasks() const{
+
4292 glActiveTexture(GL_TEXTURE0);
+
4293 glUniform1i(textureUniform,0);
+
4294 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_LINEAR);
+
4295 //glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_LINEAR);
+
4296 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4297 glTexParameteri(GL_TEXTURE_2D, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4298 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MIN_FILTER, GL_NEAREST);
+
4299 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_MAG_FILTER, GL_NEAREST);
+
4300 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_S, GL_CLAMP_TO_EDGE);
+
4301 glTexParameteri(GL_TEXTURE_RECTANGLE, GL_TEXTURE_WRAP_T, GL_CLAMP_TO_EDGE);
+
4302 glEnable(GL_BLEND);
+
4303 glBlendFunc(GL_SRC_ALPHA, GL_ONE_MINUS_SRC_ALPHA);
+
4304}
+
+
4305
+
+
4306void Shader::setTransformationMatrix(const glm::mat4 &matrix ) const{
+
4307 glUniformMatrix4fv(transformMatrixUniform, 1, GL_FALSE, &matrix[0][0]);
+
4308}
+
+
4309
+
+
4310void Shader::setDepthBiasMatrix(const glm::mat4 &matrix ) const{
+
4311 glUniformMatrix4fv(depthBiasUniform, 1, GL_FALSE, &matrix[0][0]);
+
4312}
+
+
4313
+
+
4314void Shader::setLightDirection(const helios::vec3 &direction ) const{
+
4315 glUniform3f( lightDirectionUniform, direction.x, direction.y, direction.z );
+
4316}
+
+
4317
+
+
4318void Shader::setLightingModel( uint lightingmodel ) const{
+
4319 glUniform1i( lightingModelUniform, lightingmodel );
+
4320}
+
4321
-
4322 SphericalCoord Spherical = cart2sphere( eye-center );
-
4323 float radius = Spherical.radius;
-
4324 float theta = Spherical.elevation;
-
4325 float phi = Spherical.azimuth;
-
4326
-
4327 GLFWwindow* _window = (GLFWwindow*) window;
-
4328
-
4329 //----- Holding SPACEBAR -----//
-
4330 if (glfwGetKey( _window, GLFW_KEY_SPACE ) == GLFW_PRESS){
-
4331
-
4332 // Move center to the left - SPACE + LEFT KEY
-
4333 if (glfwGetKey( _window, GLFW_KEY_LEFT ) == GLFW_PRESS){
-
4334 center.x +=0.1*sin(phi);
-
4335 center.y +=0.1*cos(phi);
-
4336 }
-
4337 // Move center to the right - SPACE + RIGHT KEY
-
4338 else if (glfwGetKey( _window, GLFW_KEY_RIGHT ) == GLFW_PRESS){
-
4339 center.x -=0.1*sin(phi);
-
4340 center.y -=0.1*cos(phi);
-
4341 }
-
4342 // Move center upward - SPACE + UP KEY
-
4343 else if (glfwGetKey( _window, GLFW_KEY_UP ) == GLFW_PRESS){
-
4344 center.z +=0.2;
-
4345 }
-
4346 // Move center downward - SPACE + DOWN KEY
-
4347 else if (glfwGetKey( _window, GLFW_KEY_DOWN ) == GLFW_PRESS){
-
4348 center.z -=0.2;
-
4349 }
-
4350
-
4351 //----- Not Holding SPACEBAR -----//
-
4352 }else{
-
4353
-
4354 // Orbit left - LEFT ARROW KEY
-
4355 if (glfwGetKey( _window, GLFW_KEY_LEFT ) == GLFW_PRESS){
-
4356 phi+=M_PI/40.f;
-
4357 }
-
4358 // Orbit right - RIGHT ARROW KEY
-
4359 else if (glfwGetKey( _window, GLFW_KEY_RIGHT ) == GLFW_PRESS){
-
4360 phi-=M_PI/40.f;
-
4361 }
-
4362
-
4363 // Increase Elevation - UP ARROW KEY
-
4364 else if (glfwGetKey( _window, GLFW_KEY_UP ) == GLFW_PRESS){
-
4365 if( theta + M_PI/80.f < 0.49f*M_PI ){
-
4366 theta+=M_PI/80.f;
-
4367 }
-
4368 }
-
4369 // Decrease Elevation - DOWN ARROW KEY
-
4370 else if (glfwGetKey( _window, GLFW_KEY_DOWN ) == GLFW_PRESS){
-
4371 if( theta>-0.25*M_PI ){
-
4372 theta-=M_PI/80.f;
-
4373 }
-
4374 }
-
4375
-
4376 // Zoom in - "+" KEY
-
4377 if (glfwGetKey( _window, GLFW_KEY_EQUAL ) == GLFW_PRESS){
-
4378 radius *= 0.9;
-
4379 }
-
4380 // Zoom out - "-" KEY
-
4381 else if (glfwGetKey( _window, GLFW_KEY_MINUS ) == GLFW_PRESS){
-
4382 radius *= 1.1;
-
4383 }
-
4384 }
-
4385
-
4386 if (glfwGetKey( _window, GLFW_KEY_P ) == GLFW_PRESS){
-
4387 std::cout << "View is angle: (R,theta,phi)=(" << radius << "," << theta << "," << phi << ") at from position (" << camera_eye_location.x << "," << camera_eye_location.y << "," << camera_eye_location.z << ") looking at (" << center.x << "," << center.y << "," << center.z << ")" << std::endl;
-
4388 }
-
4389
+
+
4322void Shader::setLightIntensity( float lightintensity ) const{
+
4323 glUniform1f( lightIntensityUniform, lightintensity );
+
4324}
+
+
4325
+
+
4326void Shader::useShader() const {
+
4327 glUseProgram(shaderID);
+
4328}
+
+
4329
+
4330
+
4331bool lbutton_down = false;
+
4332bool rbutton_down = false;
+
4333bool mbutton_down = false;
+
4334double startX, startY;
+
4335double scrollX, scrollY;
+
4336bool scroll = false;
+
4337
+
4338
+
+
4339void mouseCallback( GLFWwindow *window, int button, int action, int mods ){
+
4340 if (button == GLFW_MOUSE_BUTTON_LEFT){
+
4341 if (GLFW_PRESS == action) {lbutton_down = true;}
+
4342 else if (GLFW_RELEASE == action) {lbutton_down = false;}
+
4343 } else if (button == GLFW_MOUSE_BUTTON_MIDDLE){
+
4344 if (GLFW_PRESS == action) {mbutton_down = true;}
+
4345 else if (GLFW_RELEASE == action) {mbutton_down = false;}
+
4346 } else if (button == GLFW_MOUSE_BUTTON_RIGHT){
+
4347 if (GLFW_PRESS == action) {rbutton_down = true;}
+
4348 else if (GLFW_RELEASE == action) {rbutton_down = false;}
+
4349 }
+
4350}
+
+
4351
+
4352
+
+
4353void cursorCallback( GLFWwindow* window, double xpos, double ypos ){
+
4354 if (lbutton_down){
+
4355 dphi = (float) xpos - startX;
+
4356 dtheta = (float) ypos - startY;
+
4357 } else {dphi = 0; dtheta = 0;}
+
4358 if (rbutton_down){
+
4359 dx = (float) xpos - startX;
+
4360 dy = (float) ypos - startY;
+
4361 } else {dx = 0; dy = 0;}
+
4362 if (mbutton_down){
+
4363 dx_m = (float) xpos - startX;
+
4364 dy_m = (float) ypos - startY;
+
4365 } else {dx_m = 0; dy_m = 0;}
+
4366 startX = xpos;
+
4367 startY = ypos;
+
4368}
+
+
4369
+
4370
+
+
4371void scrollCallback( GLFWwindow* window, double xoffset, double yoffset ){
+
4372 dscroll = (float) yoffset;
+
4373 scrollY = yoffset;
+
4374 if (yoffset > 0.0 or yoffset < 0.0){
+
4375 scroll = true;
+
4376 } else {scroll = false;}
+
4377}
+
+
4378
+
4379
+
4380void Visualizer::getViewKeystrokes( vec3& eye, vec3& center ){
+
4381
+
4382 vec3 forward = center - eye;
+
4383 forward = forward.normalize();
+
4384
+
4385 vec3 right = cross(forward, vec3(0, 0, 1));
+
4386 right = right.normalize();
+
4387
+
4388 vec3 up = cross(right, forward);
+
4389 up = up.normalize();
4390
-
4391 camera_eye_location = sphere2cart( make_SphericalCoord(radius,theta,phi) ) + center;
-
4392
-
4393
-
4394}
+
4391 SphericalCoord Spherical = cart2sphere( eye-center );
+
4392 float radius = Spherical.radius;
+
4393 float theta = Spherical.elevation;
+
4394 float phi = Spherical.azimuth;
4395
-
4396std::string errorString( GLenum err ){
-
4397
-
4398 std::string message;
-
4399 message.assign("");
-
4400
-
4401 if( err==GL_INVALID_ENUM ){
-
4402 message.assign("GL_INVALID_ENUM - An unacceptable value is specified for an enumerated argument.");
-
4403 }else if( err==GL_INVALID_VALUE ){
-
4404 message.assign("GL_INVALID_VALUE - A numeric argument is out of range.");
-
4405 }else if( err==GL_INVALID_OPERATION ){
-
4406 message.assign("GL_INVALID_OPERATION - The specified operation is not allowed in the current state.");
-
4407 }else if( err==GL_STACK_OVERFLOW ){
-
4408 message.assign("GL_STACK_OVERFLOW - This command would cause a stack overflow.");
-
4409 }else if( err==GL_STACK_UNDERFLOW ){
-
4410 message.assign("GL_STACK_UNDERFLOW - This command would cause a stack underflow.");
-
4411 }else if( err==GL_OUT_OF_MEMORY ){
-
4412 message.assign("GL_OUT_OF_MEMORY - There is not enough memory left to execute the command.");
-
4413 }else if( err==GL_TABLE_TOO_LARGE ){
-
4414 message.assign("GL_TABLE_TOO_LARGE - The specified table exceeds the implementation's maximum supported table size.");
-
4415 }
+
4396 phi+=M_PI * (dphi/160.f);
+
4397 if( dtheta > 0 && theta + M_PI/80.f < 0.49f*M_PI ){
+
4398 theta+=M_PI * (dtheta/120.f);
+
4399 } else if( dtheta < 0 && theta>-0.25*M_PI ){
+
4400 theta+=M_PI * (dtheta/120.f);
+
4401 }
+
4402 if (rbutton_down){
+
4403 center += 0.05 * dy * up;
+
4404 center -= 0.05 * dx * right;
+
4405 }
+
4406 if (mbutton_down){
+
4407 eye += 0.05 * dy_m * up;
+
4408 eye -= 0.05 * dx_m * right;
+
4409 }
+
4410 if (scroll){
+
4411 center -= 0.2 * dscroll * forward;
+
4412 }
+
4413 scroll = false;
+
4414
+
4415 GLFWwindow* _window = (GLFWwindow*) window;
4416
-
4417 return message;
-
4418
-
4419}
-
4420
-
4421int checkerrors() {
-
4422
-
4423 GLenum err;
-
4424 int err_count=0;
-
4425 while ((err = glGetError()) != GL_NO_ERROR) {
-
4426 std::cerr << "glError #" << err_count << ": " << errorString(err) << std::endl;
-
4427 err_count++;
-
4428 }
-
4429 if(err_count>0){
-
4430 return 0;
-
4431 }else{
-
4432 return 1;
-
4433 }
-
4434
-
4435}
-
helios::HeliosDataType
HeliosDataType
Data types.
Definition: Context.h:41
-
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition: Context.h:31
-
read_png_file
void read_png_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a PNG image.
Definition: Visualizer.cpp:268
-
read_JPEG_file
int read_JPEG_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a JPEG image.
Definition: Visualizer.cpp:62
-
write_JPEG_file
int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages)
Write current graphics window to a JPEG image file.
Definition: Visualizer.cpp:130
+
4417 //----- Holding SPACEBAR -----//
+
4418 if (glfwGetKey( _window, GLFW_KEY_SPACE ) == GLFW_PRESS){
+
4419
+
4420 // Move center to the left - SPACE + LEFT KEY
+
4421 if (glfwGetKey( _window, GLFW_KEY_LEFT ) == GLFW_PRESS){
+
4422 center.x +=0.1*sin(phi);
+
4423 center.y +=0.1*cos(phi);
+
4424 }
+
4425 // Move center to the right - SPACE + RIGHT KEY
+
4426 else if (glfwGetKey( _window, GLFW_KEY_RIGHT ) == GLFW_PRESS){
+
4427 center.x -=0.1*sin(phi);
+
4428 center.y -=0.1*cos(phi);
+
4429 }
+
4430 // Move center upward - SPACE + UP KEY
+
4431 else if (glfwGetKey( _window, GLFW_KEY_UP ) == GLFW_PRESS){
+
4432 center.z +=0.2;
+
4433 }
+
4434 // Move center downward - SPACE + DOWN KEY
+
4435 else if (glfwGetKey( _window, GLFW_KEY_DOWN ) == GLFW_PRESS){
+
4436 center.z -=0.2;
+
4437 }
+
4438
+
4439 //----- Not Holding SPACEBAR -----//
+
4440 }else{
+
4441
+
4442 // Orbit left - LEFT ARROW KEY
+
4443 if (glfwGetKey( _window, GLFW_KEY_LEFT ) == GLFW_PRESS){
+
4444 phi+=M_PI/40.f;
+
4445 }
+
4446 // Orbit right - RIGHT ARROW KEY
+
4447 else if (glfwGetKey( _window, GLFW_KEY_RIGHT ) == GLFW_PRESS){
+
4448 phi-=M_PI/40.f;
+
4449 }
+
4450
+
4451 // Increase Elevation - UP ARROW KEY
+
4452 else if (glfwGetKey( _window, GLFW_KEY_UP ) == GLFW_PRESS){
+
4453 if( theta + M_PI/80.f < 0.49f*M_PI ){
+
4454 theta+=M_PI/80.f;
+
4455 }
+
4456 }
+
4457 // Decrease Elevation - DOWN ARROW KEY
+
4458 else if (glfwGetKey( _window, GLFW_KEY_DOWN ) == GLFW_PRESS){
+
4459 if( theta>-0.25*M_PI ){
+
4460 theta-=M_PI/80.f;
+
4461 }
+
4462 }
+
4463
+
4464 // Zoom in - "+" KEY
+
4465 if (glfwGetKey( _window, GLFW_KEY_EQUAL ) == GLFW_PRESS){
+
4466 radius *= 0.9;
+
4467 }
+
4468 // Zoom out - "-" KEY
+
4469 else if (glfwGetKey( _window, GLFW_KEY_MINUS ) == GLFW_PRESS){
+
4470 radius *= 1.1;
+
4471 }
+
4472 }
+
4473
+
4474 if (glfwGetKey( _window, GLFW_KEY_P ) == GLFW_PRESS){
+
4475 std::cout << "View is angle: (R,theta,phi)=(" << radius << "," << theta << "," << phi << ") at from position (" << camera_eye_location.x << "," << camera_eye_location.y << "," << camera_eye_location.z << ") looking at (" << center.x << "," << center.y << "," << center.z << ")" << std::endl;
+
4476 }
+
4477
+
4478
+
4479 camera_eye_location = sphere2cart( make_SphericalCoord(radius,theta,phi) ) + center;
+
4480
+
4481
+
4482}
+
4483
+
4484std::string errorString( GLenum err ){
+
4485
+
4486 std::string message;
+
4487 message.assign("");
+
4488
+
4489 if( err==GL_INVALID_ENUM ){
+
4490 message.assign("GL_INVALID_ENUM - An unacceptable value is specified for an enumerated argument.");
+
4491 }else if( err==GL_INVALID_VALUE ){
+
4492 message.assign("GL_INVALID_VALUE - A numeric argument is out of range.");
+
4493 }else if( err==GL_INVALID_OPERATION ){
+
4494 message.assign("GL_INVALID_OPERATION - The specified operation is not allowed in the current state.");
+
4495 }else if( err==GL_STACK_OVERFLOW ){
+
4496 message.assign("GL_STACK_OVERFLOW - This command would cause a stack overflow.");
+
4497 }else if( err==GL_STACK_UNDERFLOW ){
+
4498 message.assign("GL_STACK_UNDERFLOW - This command would cause a stack underflow.");
+
4499 }else if( err==GL_OUT_OF_MEMORY ){
+
4500 message.assign("GL_OUT_OF_MEMORY - There is not enough memory left to execute the command.");
+
4501 }else if( err==GL_TABLE_TOO_LARGE ){
+
4502 message.assign("GL_TABLE_TOO_LARGE - The specified table exceeds the implementation's maximum supported table size.");
+
4503 }
+
4504
+
4505 return message;
+
4506
+
4507}
+
4508
+
4509int checkerrors() {
+
4510
+
4511 GLenum err;
+
4512 int err_count=0;
+
4513 while ((err = glGetError()) != GL_NO_ERROR) {
+
4514 std::cerr << "glError #" << err_count << ": " << errorString(err) << std::endl;
+
4515 err_count++;
+
4516 }
+
4517 if(err_count>0){
+
4518 return 0;
+
4519 }else{
+
4520 return 1;
+
4521 }
+
4522
+
4523}
+
helios::HeliosDataType
HeliosDataType
Data types.
Definition Context.h:41
+
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition Context.h:31
+
read_png_file
void read_png_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a PNG image.
Definition Visualizer.cpp:268
+
cursorCallback
void cursorCallback(GLFWwindow *window, double xpos, double ypos)
Callback function for mouse cursor movements.
Definition Visualizer.cpp:4353
+
read_JPEG_file
int read_JPEG_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a JPEG image.
Definition Visualizer.cpp:62
+
write_JPEG_file
int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages)
Write current graphics window to a JPEG image file.
Definition Visualizer.cpp:130
+
mouseCallback
void mouseCallback(GLFWwindow *window, int button, int action, int mods)
Callback function for mouse button presses.
Definition Visualizer.cpp:4339
+
scrollCallback
void scrollCallback(GLFWwindow *window, double xoffset, double yoffset)
Callback function for mouse scroll.
Definition Visualizer.cpp:4371
-
read_png_file
void read_png_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a PNG image.
Definition: Visualizer.cpp:268
-
read_JPEG_file
int read_JPEG_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a JPEG image.
Definition: Visualizer.cpp:62
-
write_JPEG_file
int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages=true)
Write current graphics window to a JPEG image file.
Definition: Visualizer.cpp:130
-
Glyph
Glyph object - 2D matrix shape.
Definition: Visualizer.h:67
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
Visualizer::enableColorbar
void enableColorbar()
Enable the colorbar.
Definition: Visualizer.cpp:2590
-
Visualizer::CoordinateSystem
CoordinateSystem
Coordinate system to be used when specifying spatial coordinates.
Definition: Visualizer.h:310
-
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition: Visualizer.h:316
-
Visualizer::COORDINATES_WINDOW_NORMALIZED
@ COORDINATES_WINDOW_NORMALIZED
Coordinates are normalized to unity and are window-aligned. The point (x,y)=(0,0) is in the bottom le...
Definition: Visualizer.h:313
-
Visualizer::Ctable
Ctable
Pseudocolor map tables.
Definition: Visualizer.h:321
-
Visualizer::COLORMAP_HOT
@ COLORMAP_HOT
"Hot" colormap
Definition: Visualizer.h:323
-
Visualizer::COLORMAP_COOL
@ COLORMAP_COOL
"Cool" colormap
Definition: Visualizer.h:325
-
Visualizer::COLORMAP_CUSTOM
@ COLORMAP_CUSTOM
Custom colormap.
Definition: Visualizer.h:335
-
Visualizer::COLORMAP_GRAY
@ COLORMAP_GRAY
"Gray" colormap
Definition: Visualizer.h:333
-
Visualizer::COLORMAP_PARULA
@ COLORMAP_PARULA
"Parula" colormap
Definition: Visualizer.h:331
-
Visualizer::COLORMAP_RAINBOW
@ COLORMAP_RAINBOW
"Rainbow" colormap
Definition: Visualizer.h:327
-
Visualizer::COLORMAP_LAVA
@ COLORMAP_LAVA
"Lava" colormap
Definition: Visualizer.h:329
-
Visualizer::colorContextPrimitivesByData
void colorContextPrimitivesByData(const char *data_name)
Color primitives from Context by color mapping their ‘Primitive Data’.
Definition: Visualizer.cpp:3169
-
Visualizer::plotDepthMap
void plotDepthMap()
Plot the depth map (distance from camera to nearest object)
Definition: Visualizer.cpp:3722
-
Visualizer::getWindowPixelsRGB
void getWindowPixelsRGB(uint *buffer)
Get R-G-B pixel data in the current display window.
Definition: Visualizer.cpp:899
-
Visualizer::colorContextObjectsRandomly
void colorContextObjectsRandomly()
Color objects from Context with a random color.
Definition: Visualizer.cpp:3272
-
Visualizer::selfTest
int selfTest()
Visualizer self-test routine.
Definition: Visualizer.cpp:690
-
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition: Visualizer.cpp:2104
-
Visualizer::printWindow
void printWindow()
Print the current graphics window to a JPEG image file. File will be given a default filename and sav...
Definition: Visualizer.cpp:875
-
Visualizer::addTextboxByCenter
void addTextboxByCenter(const char *textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char *fontname, CoordinateSystem coordFlag)
Add a text box by giving the coordinates of its center.
Definition: Visualizer.cpp:2293
-
Visualizer::showWatermark
void showWatermark()
Make Helios logo watermark visible.
Definition: Visualizer.cpp:982
-
Visualizer::addTriangle
void addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a triangle by giving the coordinates of its three vertices.
Definition: Visualizer.cpp:1575
-
Visualizer::disableColorbar
void disableColorbar()
Disable the colorbar.
Definition: Visualizer.cpp:2594
-
Visualizer::setColorbarFontSize
void setColorbarFontSize(uint font_size)
Set the font size of the colorbar text.
Definition: Visualizer.cpp:2654
-
Visualizer::setColorbarFontColor
void setColorbarFontColor(helios::RGBcolor color)
Set the RGB color of the colorbar text.
Definition: Visualizer.cpp:2661
-
Visualizer::buildContextGeometry
void buildContextGeometry(helios::Context *context_ptr)
Add all geometry from the Context to the visualizer.
Definition: Visualizer.cpp:2701
-
Visualizer::addLine
void addLine(const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
Add Lines by giving the coordinates of points along the Lines.
Definition: Visualizer.cpp:2045
-
Visualizer::setLightDirection
void setLightDirection(const helios::vec3 &direction)
Set the direction of the light source.
Definition: Visualizer.cpp:788
-
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition: Visualizer.cpp:1851
-
Visualizer::setCameraFieldOfView
void setCameraFieldOfView(float angle_FOV)
Set the camera field of view (angle width) in degrees. Default value is 45 degrees.
Definition: Visualizer.cpp:784
-
Visualizer::LightingModel
LightingModel
Lighting model to use for shading primitives.
Definition: Visualizer.h:372
-
Visualizer::LIGHTING_NONE
@ LIGHTING_NONE
No shading, primitive is colored by its diffuse color.
Definition: Visualizer.h:374
-
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition: Visualizer.h:380
-
Visualizer::closeWindow
void closeWindow()
Close the graphics window.
Definition: Visualizer.cpp:973
-
Visualizer::addGridWireFrame
void addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv)
Add a coordinate axis.
Definition: Visualizer.cpp:2554
-
Visualizer::addSphereByCenter
void addSphereByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a sphere by giving the radius and center.
Definition: Visualizer.cpp:2151
-
Visualizer::setBackgroundColor
void setBackgroundColor(const helios::RGBcolor &color)
Set the background color for the visualizer window.
Definition: Visualizer.cpp:871
-
Visualizer::clearGeometry
void clearGeometry()
Clear all geometry previously added to the visualizer.
Definition: Visualizer.cpp:955
-
Visualizer::getDomainBoundingRadius
float getDomainBoundingRadius() const
Get the radius of a sphere that bounds all primitives in the domain.
Definition: Visualizer.cpp:847
-
Visualizer::getDepthMap
void getDepthMap(float *buffer)
Get depth buffer data for the current display window.
Definition: Visualizer.cpp:930
-
Visualizer::setColorbarSize
void setColorbarSize(helios::vec2 size)
Set the size of the colorbar in normalized window units (0-1)
Definition: Visualizer.cpp:2605
-
Visualizer::addCoordinateAxes
void addCoordinateAxes()
Add a coordinate axis with at the origin with unit length.
Definition: Visualizer.cpp:2512
-
Visualizer::hideWatermark
void hideWatermark()
Make Helios logo watermark invisible.
Definition: Visualizer.cpp:978
-
Visualizer::Visualizer
Visualizer(uint Wdisplay)
Visualizer constructor.
Definition: Visualizer.cpp:358
-
Visualizer::setColormap
void setColormap(Ctable colormap_name)
Set the colormap used in Colorbar/visualization based on pre-defined colormaps.
Definition: Visualizer.cpp:2665
-
Visualizer::plotUpdate
void plotUpdate()
Update the graphics window based on current geometry, then continue the program.
Definition: Visualizer.cpp:3578
-
Visualizer::setColorbarTicks
void setColorbarTicks(const std::vector< float > &ticks)
Set the values in the colorbar where ticks and labels should be placed.
Definition: Visualizer.cpp:2621
-
Visualizer::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition: Visualizer.cpp:766
-
Visualizer::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: Visualizer.cpp:770
-
Visualizer::getFramebufferSize
void getFramebufferSize(uint &width, uint &height) const
Get the size of the framebuffer in pixels.
Definition: Visualizer.cpp:950
-
Visualizer::plotInteractive
std::vector< helios::vec3 > plotInteractive()
Plot current geometry into an interactive graphics window.
Definition: Visualizer.cpp:3295
-
Visualizer::addSkyDomeByCenter
void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
Definition: Visualizer.cpp:2200
-
Visualizer::setColorbarRange
void setColorbarRange(float cmin, float cmax)
Set the range of the Colorbar.
Definition: Visualizer.cpp:2612
-
Visualizer::setCameraPosition
void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
Set camera position.
Definition: Visualizer.cpp:774
-
Visualizer::addRectangleByVertices
void addRectangleByVertices(const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its four vertices.
Definition: Visualizer.cpp:1119
-
Visualizer::colorContextPrimitivesRandomly
void colorContextPrimitivesRandomly()
Color primitives from Context with a random color.
Definition: Visualizer.cpp:3234
-
Visualizer::addRectangleByCenter
void addRectangleByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its center.
Definition: Visualizer.cpp:999
-
Visualizer::addDiskByCenter
void addDiskByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a disk by giving the coordinates of its center.
Definition: Visualizer.cpp:1881
-
Visualizer::setColorbarPosition
void setColorbarPosition(helios::vec3 position)
Set the position of the colorbar in normalized window coordinates (0-1)
Definition: Visualizer.cpp:2598
-
Visualizer::colorContextPrimitivesByObjectData
void colorContextPrimitivesByObjectData(const char *data_name)
Color primitives from Context by color mapping their ‘Object Data’.
Definition: Visualizer.cpp:3191
-
Visualizer::setLightIntensityFactor
void setLightIntensityFactor(float lightintensityfactor)
Set the light intensity scaling factor.
Definition: Visualizer.cpp:867
-
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition: Visualizer.cpp:2697
-
Visualizer::setColorbarTitle
void setColorbarTitle(const char *title)
Set the title of the Colorbar.
Definition: Visualizer.cpp:2650
-
Visualizer::getWindowSize
void getWindowSize(uint &width, uint &height) const
Get the size of the display window in pixels.
Definition: Visualizer.cpp:945
-
Visualizer::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Visualizer.cpp:795
-
Visualizer::setLightingModel
void setLightingModel(LightingModel lightingmodel)
Set the lighting model for shading of all primitives.
Definition: Visualizer.cpp:861
-
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition: Context.cpp:2256
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:2983
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition: Context.cpp:2589
-
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition: Context_data.cpp:2815
-
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition: Context.cpp:2116
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition: Context.cpp:7135
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition: Context_data.cpp:2467
-
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition: Context_data.cpp:1169
-
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition: Context.cpp:1166
-
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Context.cpp:2046
-
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition: Context.cpp:1099
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition: Context.cpp:2585
-
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:1155
-
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition: Context.cpp:7217
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition: Context_data.cpp:2969
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition: global.cpp:3102
-
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition: global.cpp:29
-
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition: global.cpp:223
-
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition: global.cpp:79
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::clamp
anytype clamp(anytype value, anytype min, anytype max)
Clamp value to be within some specified bounds.
Definition: global.cpp:1055
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition: helios_vector_types.h:1133
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
Colormap
RGB color map.
Definition: Visualizer.h:165
-
Shader::useShader
void useShader() const
Set shader as current.
Definition: Visualizer.cpp:4315
-
Shader::setLightingModel
void setLightingModel(uint lightingmodel) const
Set the lighting model.
Definition: Visualizer.cpp:4307
-
Shader::setDepthBiasMatrix
void setDepthBiasMatrix(const glm::mat4 &matrix) const
Set the depth bias matrix for shadows.
Definition: Visualizer.cpp:4299
-
Shader::initialize
void initialize(const char *vertex_shader_file, const char *fragment_shader_file)
Initialize the shader.
Definition: Visualizer.cpp:3920
-
Shader::setLightDirection
void setLightDirection(const helios::vec3 &direction) const
Set the direction of the light (sun)
Definition: Visualizer.cpp:4303
-
Shader::enableTextureMasks
void enableTextureMasks() const
Enable texture masks and color fragments by interpolating vertex colors.
Definition: Visualizer.cpp:4280
-
Shader::disableTextures
void disableTextures() const
Disable texture maps and color fragments by interpolating vertex colors.
Definition: Visualizer.cpp:4076
-
Shader::setTextureMask
void setTextureMask(const Glyph *glyph, uint &textureID)
Set fragment opacity using a Glyph (red channel)
Definition: Visualizer.cpp:4176
-
Shader::enableTextureMaps
void enableTextureMaps() const
Enable texture maps and color fragments using an RGB texture map.
Definition: Visualizer.cpp:4160
-
Shader::setTextureMap
void setTextureMap(const char *texture_file, uint &textureID, helios::int2 &texture_size)
Color fragments using an RGB texture map.
Definition: Visualizer.cpp:4081
-
Shader::setLightIntensity
void setLightIntensity(float lightintensity) const
Set the intensity of the light source.
Definition: Visualizer.cpp:4311
-
Shader::setTransformationMatrix
void setTransformationMatrix(const glm::mat4 &matrix) const
Set the shader transformation matrix, i.e., the Affine transformation applied to all vertices.
Definition: Visualizer.cpp:4295
- -
helios::Date::month
int month
Month of year.
Definition: helios_vector_types.h:1174
-
helios::Date::day
int day
Day of month.
Definition: helios_vector_types.h:1172
-
helios::Date::year
int year
Year in YYYY format.
Definition: helios_vector_types.h:1176
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBAcolor::r
float r
Red color component.
Definition: helios_vector_types.h:1029
-
helios::RGBAcolor::a
float a
Alpha (transparency) component.
Definition: helios_vector_types.h:1038
-
helios::RGBAcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:1035
-
helios::RGBAcolor::g
float g
Green color component.
Definition: helios_vector_types.h:1032
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
- -
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
- -
helios::Time::second
int second
Second of minute.
Definition: helios_vector_types.h:1355
-
helios::Time::hour
int hour
Hour of day.
Definition: helios_vector_types.h:1359
-
helios::Time::minute
int minute
Minute of hour.
Definition: helios_vector_types.h:1357
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
-
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition: helios_vector_types.h:526
-
my_error_mgr
Definition: Visualizer.cpp:43
+
read_png_file
void read_png_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a PNG image.
Definition Visualizer.cpp:268
+
read_JPEG_file
int read_JPEG_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a JPEG image.
Definition Visualizer.cpp:62
+
cursorCallback
void cursorCallback(GLFWwindow *window, double x, double y)
Callback function for mouse cursor movements.
Definition Visualizer.cpp:4353
+
mouseCallback
void mouseCallback(GLFWwindow *window, int button, int action, int mods)
Callback function for mouse button presses.
Definition Visualizer.cpp:4339
+
write_JPEG_file
int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages=true)
Write current graphics window to a JPEG image file.
Definition Visualizer.cpp:130
+
scrollCallback
void scrollCallback(GLFWwindow *window, double xoffset, double yoffset)
Callback function for mouse scroll.
Definition Visualizer.cpp:4371
+
Glyph
Glyph object - 2D matrix shape.
Definition Visualizer.h:77
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
Visualizer::enableColorbar
void enableColorbar()
Enable the colorbar.
Definition Visualizer.cpp:2594
+
Visualizer::CoordinateSystem
CoordinateSystem
Coordinate system to be used when specifying spatial coordinates.
Definition Visualizer.h:320
+
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition Visualizer.h:326
+
Visualizer::COORDINATES_WINDOW_NORMALIZED
@ COORDINATES_WINDOW_NORMALIZED
Coordinates are normalized to unity and are window-aligned. The point (x,y)=(0,0) is in the bottom le...
Definition Visualizer.h:323
+
Visualizer::Ctable
Ctable
Pseudocolor map tables.
Definition Visualizer.h:331
+
Visualizer::COLORMAP_HOT
@ COLORMAP_HOT
"Hot" colormap
Definition Visualizer.h:333
+
Visualizer::COLORMAP_COOL
@ COLORMAP_COOL
"Cool" colormap
Definition Visualizer.h:335
+
Visualizer::COLORMAP_CUSTOM
@ COLORMAP_CUSTOM
Custom colormap.
Definition Visualizer.h:345
+
Visualizer::COLORMAP_GRAY
@ COLORMAP_GRAY
"Gray" colormap
Definition Visualizer.h:343
+
Visualizer::COLORMAP_PARULA
@ COLORMAP_PARULA
"Parula" colormap
Definition Visualizer.h:341
+
Visualizer::COLORMAP_RAINBOW
@ COLORMAP_RAINBOW
"Rainbow" colormap
Definition Visualizer.h:337
+
Visualizer::COLORMAP_LAVA
@ COLORMAP_LAVA
"Lava" colormap
Definition Visualizer.h:339
+
Visualizer::colorContextPrimitivesByData
void colorContextPrimitivesByData(const char *data_name)
Color primitives from Context by color mapping their ‘Primitive Data’.
Definition Visualizer.cpp:3173
+
Visualizer::plotDepthMap
void plotDepthMap()
Plot the depth map (distance from camera to nearest object)
Definition Visualizer.cpp:3733
+
Visualizer::getWindowPixelsRGB
void getWindowPixelsRGB(uint *buffer)
Get R-G-B pixel data in the current display window.
Definition Visualizer.cpp:903
+
Visualizer::colorContextObjectsRandomly
void colorContextObjectsRandomly()
Color objects from Context with a random color.
Definition Visualizer.cpp:3276
+
Visualizer::selfTest
int selfTest()
Visualizer self-test routine.
Definition Visualizer.cpp:694
+
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition Visualizer.cpp:2108
+
Visualizer::printWindow
void printWindow()
Print the current graphics window to a JPEG image file. File will be given a default filename and sav...
Definition Visualizer.cpp:879
+
Visualizer::addTextboxByCenter
void addTextboxByCenter(const char *textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char *fontname, CoordinateSystem coordFlag)
Add a text box by giving the coordinates of its center.
Definition Visualizer.cpp:2297
+
Visualizer::showWatermark
void showWatermark()
Make Helios logo watermark visible.
Definition Visualizer.cpp:986
+
Visualizer::addTriangle
void addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a triangle by giving the coordinates of its three vertices.
Definition Visualizer.cpp:1579
+
Visualizer::disableColorbar
void disableColorbar()
Disable the colorbar.
Definition Visualizer.cpp:2598
+
Visualizer::setColorbarFontSize
void setColorbarFontSize(uint font_size)
Set the font size of the colorbar text.
Definition Visualizer.cpp:2658
+
Visualizer::setColorbarFontColor
void setColorbarFontColor(helios::RGBcolor color)
Set the RGB color of the colorbar text.
Definition Visualizer.cpp:2665
+
Visualizer::buildContextGeometry
void buildContextGeometry(helios::Context *context_ptr)
Add all geometry from the Context to the visualizer.
Definition Visualizer.cpp:2705
+
Visualizer::addLine
void addLine(const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
Add Lines by giving the coordinates of points along the Lines.
Definition Visualizer.cpp:2049
+
Visualizer::setLightDirection
void setLightDirection(const helios::vec3 &direction)
Set the direction of the light source.
Definition Visualizer.cpp:792
+
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition Visualizer.cpp:1855
+
Visualizer::setCameraFieldOfView
void setCameraFieldOfView(float angle_FOV)
Set the camera field of view (angle width) in degrees. Default value is 45 degrees.
Definition Visualizer.cpp:788
+
Visualizer::LightingModel
LightingModel
Lighting model to use for shading primitives.
Definition Visualizer.h:382
+
Visualizer::LIGHTING_NONE
@ LIGHTING_NONE
No shading, primitive is colored by its diffuse color.
Definition Visualizer.h:384
+
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition Visualizer.h:390
+
Visualizer::closeWindow
void closeWindow()
Close the graphics window.
Definition Visualizer.cpp:977
+
Visualizer::addGridWireFrame
void addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv)
Add a coordinate axis.
Definition Visualizer.cpp:2558
+
Visualizer::addSphereByCenter
void addSphereByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a sphere by giving the radius and center.
Definition Visualizer.cpp:2155
+
Visualizer::setBackgroundColor
void setBackgroundColor(const helios::RGBcolor &color)
Set the background color for the visualizer window.
Definition Visualizer.cpp:875
+
Visualizer::clearGeometry
void clearGeometry()
Clear all geometry previously added to the visualizer.
Definition Visualizer.cpp:959
+
Visualizer::getDomainBoundingRadius
float getDomainBoundingRadius() const
Get the radius of a sphere that bounds all primitives in the domain.
Definition Visualizer.cpp:851
+
Visualizer::getDepthMap
void getDepthMap(float *buffer)
Get depth buffer data for the current display window.
Definition Visualizer.cpp:934
+
Visualizer::setColorbarSize
void setColorbarSize(helios::vec2 size)
Set the size of the colorbar in normalized window units (0-1)
Definition Visualizer.cpp:2609
+
Visualizer::addCoordinateAxes
void addCoordinateAxes()
Add a coordinate axis with at the origin with unit length.
Definition Visualizer.cpp:2516
+
Visualizer::hideWatermark
void hideWatermark()
Make Helios logo watermark invisible.
Definition Visualizer.cpp:982
+
Visualizer::Visualizer
Visualizer(uint Wdisplay)
Visualizer constructor.
Definition Visualizer.cpp:358
+
Visualizer::setColormap
void setColormap(Ctable colormap_name)
Set the colormap used in Colorbar/visualization based on pre-defined colormaps.
Definition Visualizer.cpp:2669
+
Visualizer::plotUpdate
void plotUpdate()
Update the graphics window based on current geometry, then continue the program.
Definition Visualizer.cpp:3589
+
Visualizer::setColorbarTicks
void setColorbarTicks(const std::vector< float > &ticks)
Set the values in the colorbar where ticks and labels should be placed.
Definition Visualizer.cpp:2625
+
Visualizer::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition Visualizer.cpp:770
+
Visualizer::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition Visualizer.cpp:774
+
Visualizer::getFramebufferSize
void getFramebufferSize(uint &width, uint &height) const
Get the size of the framebuffer in pixels.
Definition Visualizer.cpp:954
+
Visualizer::plotInteractive
std::vector< helios::vec3 > plotInteractive()
Plot current geometry into an interactive graphics window.
Definition Visualizer.cpp:3306
+
Visualizer::addSkyDomeByCenter
void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
Definition Visualizer.cpp:2204
+
Visualizer::setColorbarRange
void setColorbarRange(float cmin, float cmax)
Set the range of the Colorbar.
Definition Visualizer.cpp:2616
+
Visualizer::setCameraPosition
void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
Set camera position.
Definition Visualizer.cpp:778
+
Visualizer::addRectangleByVertices
void addRectangleByVertices(const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its four vertices.
Definition Visualizer.cpp:1123
+
Visualizer::colorContextPrimitivesRandomly
void colorContextPrimitivesRandomly()
Color primitives from Context with a random color.
Definition Visualizer.cpp:3238
+
Visualizer::addRectangleByCenter
void addRectangleByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its center.
Definition Visualizer.cpp:1003
+
Visualizer::addDiskByCenter
void addDiskByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a disk by giving the coordinates of its center.
Definition Visualizer.cpp:1885
+
Visualizer::setColorbarPosition
void setColorbarPosition(helios::vec3 position)
Set the position of the colorbar in normalized window coordinates (0-1)
Definition Visualizer.cpp:2602
+
Visualizer::colorContextPrimitivesByObjectData
void colorContextPrimitivesByObjectData(const char *data_name)
Color primitives from Context by color mapping their ‘Object Data’.
Definition Visualizer.cpp:3195
+
Visualizer::setLightIntensityFactor
void setLightIntensityFactor(float lightintensityfactor)
Set the light intensity scaling factor.
Definition Visualizer.cpp:871
+
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition Visualizer.cpp:2701
+
Visualizer::setColorbarTitle
void setColorbarTitle(const char *title)
Set the title of the Colorbar.
Definition Visualizer.cpp:2654
+
Visualizer::getWindowSize
void getWindowSize(uint &width, uint &height) const
Get the size of the display window in pixels.
Definition Visualizer.cpp:949
+
Visualizer::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Visualizer.cpp:799
+
Visualizer::setLightingModel
void setLightingModel(LightingModel lightingmodel)
Set the lighting model for shading of all primitives.
Definition Visualizer.cpp:865
+
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition Context.cpp:2256
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::doesObjectDataExist
bool doesObjectDataExist(uint objID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:2983
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::getAllObjectIDs
std::vector< uint > getAllObjectIDs() const
Get the IDs for all Compound Objects in the Context.
Definition Context.cpp:2589
+
helios::Context::getObjectData
void getObjectData(uint objID, const char *label, int &data) const
Get data associated with a compound object.
Definition Context_data.cpp:2815
+
helios::Context::getDomainBoundingSphere
void getDomainBoundingSphere(helios::vec3 &center, float &radius) const
Get the center and radius of a sphere that bounds all primitives in the domain.
Definition Context.cpp:2116
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition Context.cpp:7135
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::setObjectData
void setObjectData(uint objID, const char *label, const int &data)
Add data value (int) associated with a compound object.
Definition Context_data.cpp:2467
+
helios::Context::doesPrimitiveDataExist
bool doesPrimitiveDataExist(uint UUID, const char *label) const
Check if primitive data 'label' exists.
Definition Context_data.cpp:1169
+
helios::Context::getTime
helios::Time getTime() const
Get the simulation time.
Definition Context.cpp:1166
+
helios::Context::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Context.cpp:2046
+
helios::Context::getDate
helios::Date getDate() const
Get simulation date.
Definition Context.cpp:1099
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::doesObjectExist
bool doesObjectExist(uint ObjID) const
Check whether Compound Object exists in the Context.
Definition Context.cpp:2585
+
helios::Context::getPrimitiveDataType
HeliosDataType getPrimitiveDataType(uint UUID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:1155
+
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition Context.cpp:7217
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::Context::getObjectDataType
HeliosDataType getObjectDataType(uint objID, const char *label) const
Get the Helios data type of primitive data.
Definition Context_data.cpp:2969
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::validateOutputPath
bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
Definition global.cpp:3102
+
helios::helios_runtime_error
void helios_runtime_error(const std::string &error_message)
Function to throw a runtime error.
Definition global.cpp:29
+
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition global.cpp:223
+
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition global.cpp:79
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::clamp
anytype clamp(anytype value, anytype min, anytype max)
Clamp value to be within some specified bounds.
Definition global.cpp:1055
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBAcolor
RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
Make an RGBAcolor vector.
Definition helios_vector_types.h:1133
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
Colormap
RGB color map.
Definition Visualizer.h:175
+
Shader::useShader
void useShader() const
Set shader as current.
Definition Visualizer.cpp:4326
+
Shader::setLightingModel
void setLightingModel(uint lightingmodel) const
Set the lighting model.
Definition Visualizer.cpp:4318
+
Shader::setDepthBiasMatrix
void setDepthBiasMatrix(const glm::mat4 &matrix) const
Set the depth bias matrix for shadows.
Definition Visualizer.cpp:4310
+
Shader::initialize
void initialize(const char *vertex_shader_file, const char *fragment_shader_file)
Initialize the shader.
Definition Visualizer.cpp:3931
+
Shader::setLightDirection
void setLightDirection(const helios::vec3 &direction) const
Set the direction of the light (sun)
Definition Visualizer.cpp:4314
+
Shader::enableTextureMasks
void enableTextureMasks() const
Enable texture masks and color fragments by interpolating vertex colors.
Definition Visualizer.cpp:4291
+
Shader::disableTextures
void disableTextures() const
Disable texture maps and color fragments by interpolating vertex colors.
Definition Visualizer.cpp:4087
+
Shader::setTextureMask
void setTextureMask(const Glyph *glyph, uint &textureID)
Set fragment opacity using a Glyph (red channel)
Definition Visualizer.cpp:4187
+
Shader::enableTextureMaps
void enableTextureMaps() const
Enable texture maps and color fragments using an RGB texture map.
Definition Visualizer.cpp:4171
+
Shader::setTextureMap
void setTextureMap(const char *texture_file, uint &textureID, helios::int2 &texture_size)
Color fragments using an RGB texture map.
Definition Visualizer.cpp:4092
+
Shader::setLightIntensity
void setLightIntensity(float lightintensity) const
Set the intensity of the light source.
Definition Visualizer.cpp:4322
+
Shader::setTransformationMatrix
void setTransformationMatrix(const glm::mat4 &matrix) const
Set the shader transformation matrix, i.e., the Affine transformation applied to all vertices.
Definition Visualizer.cpp:4306
+ +
helios::Date::month
int month
Month of year.
Definition helios_vector_types.h:1174
+
helios::Date::day
int day
Day of month.
Definition helios_vector_types.h:1172
+
helios::Date::year
int year
Year in YYYY format.
Definition helios_vector_types.h:1176
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBAcolor::r
float r
Red color component.
Definition helios_vector_types.h:1029
+
helios::RGBAcolor::a
float a
Alpha (transparency) component.
Definition helios_vector_types.h:1038
+
helios::RGBAcolor::b
float b
Blue color component.
Definition helios_vector_types.h:1035
+
helios::RGBAcolor::g
float g
Green color component.
Definition helios_vector_types.h:1032
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+ +
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+ +
helios::Time::second
int second
Second of minute.
Definition helios_vector_types.h:1355
+
helios::Time::hour
int hour
Hour of day.
Definition helios_vector_types.h:1359
+
helios::Time::minute
int minute
Minute of hour.
Definition helios_vector_types.h:1357
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
+
helios::vec3::magnitude
float magnitude() const
Compute the vector magnitude.
Definition helios_vector_types.h:526
+
my_error_mgr
Definition Visualizer.cpp:43
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_visualizer_8h.html b/doc/html/_visualizer_8h.html index eb192c51d..d67824470 100644 --- a/doc/html/_visualizer_8h.html +++ b/doc/html/_visualizer_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures | @@ -99,6 +111,7 @@
#include "Context.h"
#include "glm/glm.hpp"
#include "glm/gtc/matrix_transform.hpp"
+#include <GLFW/glfw3.h>
#include "glm/gtx/transform.hpp"

Go to the source code of this file.

@@ -120,19 +133,28 @@ - + - + - + - + - + + + + + + + + + +

Functions

int read_JPEG_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
int read_JPEG_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
 Function to create a texture map from a JPEG image.
 
int write_JPEG_file (const char *filename, uint width, uint height, void *_window, bool print_messages=true)
int write_JPEG_file (const char *filename, uint width, uint height, void *_window, bool print_messages=true)
 Write current graphics window to a JPEG image file.
 
int write_JPEG_file (const char *filename, const uint width, const uint height, const std::vector< helios::RGBcolor > &data, bool print_messages=true)
int write_JPEG_file (const char *filename, const uint width, const uint height, const std::vector< helios::RGBcolor > &data, bool print_messages=true)
 Write a JPEG image file based on array of pixel data.
 
void read_png_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
void read_png_file (const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
 Function to create a texture map from a PNG image.
 
int checkerrors ()
void mouseCallback (GLFWwindow *window, int button, int action, int mods)
 Callback function for mouse button presses.
 
void cursorCallback (GLFWwindow *window, double x, double y)
 Callback function for mouse cursor movements.
 
void scrollCallback (GLFWwindow *window, double xoffset, double yoffset)
 Callback function for mouse scroll.
 
int checkerrors ()
 

Detailed Description

@@ -169,50 +191,106 @@

int checkerrors ( - ) + )

-

Definition at line 4421 of file Visualizer.cpp.

+

Definition at line 4509 of file Visualizer.cpp.

- -

◆ read_JPEG_file()

+ +

◆ cursorCallback()

- + - - + - - + + + + + + + +
int read_JPEG_file void cursorCallback (const char * filename, GLFWwindow * window,
std::vector< unsigned char > & texture, double x,
double y )
+
+ +

Callback function for mouse cursor movements.

+ +

Definition at line 4353 of file Visualizer.cpp.

+ +
+
+ +

◆ mouseCallback()

+ +
+
+ + + + + + + + + + + + + + + + + + + + + +
void mouseCallback (GLFWwindow * window,
int button,
int action,
int mods )
+
+ +

Callback function for mouse button presses.

+ +

Definition at line 4339 of file Visualizer.cpp.

+ +
+
+ +

◆ read_JPEG_file()

+ +
+
+ + + + + - - + - - + + - - +
int read_JPEG_file (const char * filename,
uint & height, std::vector< unsigned char > & texture,
uint & width uint & height,
)uint & width )
@@ -241,31 +319,22 @@

void read_png_file ( - const char *  - filename, + const char * filename, - std::vector< unsigned char > &  - texture, + std::vector< unsigned char > & texture, - uint &  - height, + uint & height, - uint &  - width  - - - - ) - + uint & width )

@@ -285,46 +354,66 @@

-

◆ write_JPEG_file() [1/2]

+ +

◆ scrollCallback()

- + - - + - - + - - + + +
int write_JPEG_file void scrollCallback (const char * filename, GLFWwindow * window,
const uint width, double xoffset,
const uint height, double yoffset )
+
+ +

Callback function for mouse scroll.

+ +

Definition at line 4371 of file Visualizer.cpp.

+ +
+
+ +

◆ write_JPEG_file() [1/2]

+ +
+
+ + + + + - - + - - + + - - + + + + + +
int write_JPEG_file (const char * filename,
const std::vector< helios::RGBcolor > & data, const uint width,
bool print_messages = true const uint height,
)const std::vector< helios::RGBcolor > & data,
bool print_messages = true )
@@ -352,37 +441,27 @@

int write_JPEG_file ( - const char *  - filename, + const char * filename, - uint  - width, + uint width, - uint  - height, + uint height, - void *  - _window, + void * _window, - bool  - print_messages = true  - - - - ) - + bool print_messages = true )

@@ -406,7 +485,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_visualizer_8h_source.html b/doc/html/_visualizer_8h_source.html index c74e9c91e..6cde6e65f 100644 --- a/doc/html/_visualizer_8h_source.html +++ b/doc/html/_visualizer_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Visualizer.h
@@ -102,700 +114,727 @@
22#define GLM_FORCE_RADIANS
23#include "glm/glm.hpp"
24#include "glm/gtc/matrix_transform.hpp"
-
25#include "glm/gtx/transform.hpp"
-
26
-
28
-
34int read_JPEG_file (const char * filename, std::vector<unsigned char> &texture, uint & height, uint & width);
-
35
-
37
-
44int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages = true);
-
45
+
25#include <GLFW/glfw3.h>
+
26#include "glm/gtx/transform.hpp"
+
27
+
29
+
35int read_JPEG_file (const char * filename, std::vector<unsigned char> &texture, uint & height, uint & width);
+
36
+
38
+
45int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages = true);
46
-
48
-
55int write_JPEG_file(const char *filename, const uint width, const uint height, const std::vector<helios::RGBcolor> &data, bool print_messages = true);
-
56
-
58
-
64void read_png_file( const char* filename, std::vector<unsigned char> &texture, uint & height, uint & width);
-
65
-
67class Glyph{
-
68 public:
-
69
-
70 helios::int2 size;
-
71 std::vector<std::vector<uint> > data;
-
72 float solidFraction;
-
73 char* filename;
-
74
-
75 void readFile( const char* glyphfile );
-
76
-
77};
-
78
-
80struct Shader{
-
81public:
-
82
-
84 void disableTextures() const;
-
85
-
87
-
92 void setTextureMap( const char* texture_file, uint& textureID, helios::int2& texture_size );
-
93
-
95 void enableTextureMaps() const;
-
96
-
98
-
102 void setTextureMask( const Glyph* glyph, uint& textureID );
+
47
+
49
+
56int write_JPEG_file(const char *filename, const uint width, const uint height, const std::vector<helios::RGBcolor> &data, bool print_messages = true);
+
57
+
59
+
65void read_png_file( const char* filename, std::vector<unsigned char> &texture, uint & height, uint & width);
+
66
+
68void mouseCallback( GLFWwindow* window, int button, int action, int mods );
+
69
+
71void cursorCallback( GLFWwindow* window, double x, double y);
+
72
+
74void scrollCallback( GLFWwindow* window, double xoffset, double yoffset );
+
75
+
+
77class Glyph{
+
78 public:
+
79
+
80 helios::int2 size;
+
81 std::vector<std::vector<uint> > data;
+
82 float solidFraction;
+
83 char* filename;
+
84
+
85 void readFile( const char* glyphfile );
+
86
+
87};
+
+
88
+
+
90struct Shader{
+
91public:
+
92
+
94 void disableTextures() const;
+
95
+
97
+
102 void setTextureMap( const char* texture_file, uint& textureID, helios::int2& texture_size );
103
-
105
-
110 void setTextureMask( const char* texture_file, uint& textureID, helios::int2& texture_size );
-
111
-
113 void enableTextureMasks() const;
-
114
-
116 void setTransformationMatrix(const glm::mat4 &matrix ) const;
-
117
-
119 void setDepthBiasMatrix(const glm::mat4 &matrix ) const;
-
120
-
122 void setLightDirection(const helios::vec3 &direction ) const;
-
123
-
125 void setLightingModel( uint lightingmodel ) const;
-
126
-
128 void setLightIntensity( float lightintensity ) const;
-
129
-
131 void useShader() const;
-
132
-
134
-
138 void initialize( const char* vertex_shader_file, const char* fragment_shader_file );
+
105 void enableTextureMaps() const;
+
106
+
108
+
112 void setTextureMask( const Glyph* glyph, uint& textureID );
+
113
+
115
+
120 void setTextureMask( const char* texture_file, uint& textureID, helios::int2& texture_size );
+
121
+
123 void enableTextureMasks() const;
+
124
+
126 void setTransformationMatrix(const glm::mat4 &matrix ) const;
+
127
+
129 void setDepthBiasMatrix(const glm::mat4 &matrix ) const;
+
130
+
132 void setLightDirection(const helios::vec3 &direction ) const;
+
133
+
135 void setLightingModel( uint lightingmodel ) const;
+
136
+
138 void setLightIntensity( float lightintensity ) const;
139
-
140 ~Shader();
-
141
-
142 //Primary Shader
-
143 uint shaderID;
-
144 uint textureUniform;
-
145 uint shadowmapUniform;
-
146 uint transformMatrixUniform;
-
147 uint depthBiasUniform;
-
148 uint lightDirectionUniform;
-
149 uint lightingModelUniform;
-
150 uint RboundUniform;
-
151 float lightIntensityUniform;
-
152 uint VertexArrayID;
-
153
-
154private:
-
155
-
156 std::vector<uint> textureMaps;
-
157 std::vector<helios::int2> textureSizes;
-
158 std::vector<std::string> textureMapFiles;
-
159 std::vector<uint> textureMasks;
-
160 std::vector<std::string> textureMaskFiles;
-
161
-
162};
-
163
-
165struct Colormap{
-
166public:
-
167
-
168 Colormap() : cmapsize(0), minval(0.0f), maxval(1.0f) {};
-
169
-
170 Colormap(const std::vector<helios::RGBcolor> &ctable, const std::vector<float> &clocs, int size, float minval_, float maxval_ ) : cmapsize(size), minval(minval_), maxval(maxval_){
-
171
-
172 set( ctable, clocs, size, minval_, maxval_ );
+
141 void useShader() const;
+
142
+
144
+
148 void initialize( const char* vertex_shader_file, const char* fragment_shader_file );
+
149
+
150 ~Shader();
+
151
+
152 //Primary Shader
+
153 uint shaderID;
+
154 uint textureUniform;
+
155 uint shadowmapUniform;
+
156 uint transformMatrixUniform;
+
157 uint depthBiasUniform;
+
158 uint lightDirectionUniform;
+
159 uint lightingModelUniform;
+
160 uint RboundUniform;
+
161 float lightIntensityUniform;
+
162 uint VertexArrayID;
+
163
+
164private:
+
165
+
166 std::vector<uint> textureMaps;
+
167 std::vector<helios::int2> textureSizes;
+
168 std::vector<std::string> textureMapFiles;
+
169 std::vector<uint> textureMasks;
+
170 std::vector<std::string> textureMaskFiles;
+
171
+
172};
+
173
-
174 }
-
175
-
176 void set(const std::vector<helios::RGBcolor> &ctable, const std::vector<float> &clocs, int size, float minval_, float maxval_ ){
+
+
175struct Colormap{
+
176public:
177
-
178 cmapsize = size;
-
179 minval = minval_;
-
180 maxval = maxval_;
+
178 Colormap() : cmapsize(0), minval(0.0f), maxval(1.0f) {};
+
179
+
180 Colormap(const std::vector<helios::RGBcolor> &ctable, const std::vector<float> &clocs, int size, float minval_, float maxval_ ) : cmapsize(size), minval(minval_), maxval(maxval_){
181
-
182 size_t Ncolors=ctable.size();
+
182 set( ctable, clocs, size, minval_, maxval_ );
183
-
184 assert( clocs.size() == Ncolors && minval_<maxval_ );
+
184 }
185
-
186 cmap.resize(Ncolors);
+
186 void set(const std::vector<helios::RGBcolor> &ctable, const std::vector<float> &clocs, int size, float minval_, float maxval_ ){
187
-
188 float cmin,cmax;
-
189 std::vector<float> cinds;
-
190 cinds.resize(Ncolors);
+
188 cmapsize = size;
+
189 minval = minval_;
+
190 maxval = maxval_;
191
-
192 for( uint i=0; i<Ncolors; i++ ){
-
193 cinds.at(i)=clocs.at(i)*float(cmapsize-1);
-
194 }
+
192 size_t Ncolors=ctable.size();
+
193
+
194 assert( clocs.size() == Ncolors && minval_<maxval_ );
195
-
196 cmap.resize(cmapsize);
-
197 for( uint c=0; c<Ncolors-1; c++ ){
-
198
-
199 cmin=cinds.at(c);
-
200 cmax=cinds.at(c+1);
+
196 cmap.resize(Ncolors);
+
197
+
198 float cmin,cmax;
+
199 std::vector<float> cinds;
+
200 cinds.resize(Ncolors);
201
-
202 for( uint i=0; i<cmapsize; i++){
-
203
-
204 if( float(i)>=cmin && float(i)<=cmax ){
+
202 for( uint i=0; i<Ncolors; i++ ){
+
203 cinds.at(i)=clocs.at(i)*float(cmapsize-1);
+
204 }
205
-
206 cmap.at(i).r=ctable.at(c).r+(float(i)-cmin)/(cmax-cmin)*(ctable.at(c+1).r-ctable.at(c).r);
-
207 cmap.at(i).g=ctable.at(c).g+(float(i)-cmin)/(cmax-cmin)*(ctable.at(c+1).g-ctable.at(c).g);
-
208 cmap.at(i).b=ctable.at(c).b+(float(i)-cmin)/(cmax-cmin)*(ctable.at(c+1).b-ctable.at(c).b);
-
209
-
210 }
-
211 }
-
212 }
+
206 cmap.resize(cmapsize);
+
207 for( uint c=0; c<Ncolors-1; c++ ){
+
208
+
209 cmin=cinds.at(c);
+
210 cmax=cinds.at(c+1);
+
211
+
212 for( uint i=0; i<cmapsize; i++){
213
-
214 }
+
214 if( float(i)>=cmin && float(i)<=cmax ){
215
-
216 helios::RGBcolor query( float x ) const{
-
217
-
218 assert( cmapsize>0 && !cmap.empty() );
+
216 cmap.at(i).r=ctable.at(c).r+(float(i)-cmin)/(cmax-cmin)*(ctable.at(c+1).r-ctable.at(c).r);
+
217 cmap.at(i).g=ctable.at(c).g+(float(i)-cmin)/(cmax-cmin)*(ctable.at(c+1).g-ctable.at(c).g);
+
218 cmap.at(i).b=ctable.at(c).b+(float(i)-cmin)/(cmax-cmin)*(ctable.at(c+1).b-ctable.at(c).b);
219
-
220 helios::RGBcolor color;
-
221
-
222 uint color_ind;
-
223 if( minval==maxval ){
-
224 color_ind=0;
-
225 }else{
-
226 color_ind=std::round( (x-minval)/(maxval-minval) * float(cmapsize-1) );
-
227 }
-
228
-
229 if(color_ind<0){color_ind=0;}
-
230 if(color_ind>cmapsize-1){color_ind=int(cmapsize-1);}
-
231 color.r=cmap.at(color_ind).r;
-
232 color.g=cmap.at(color_ind).g;
-
233 color.b=cmap.at(color_ind).b;
-
234
-
235 return color;
-
236
-
237 }
+
220 }
+
221 }
+
222 }
+
223
+
224 }
+
225
+
226 helios::RGBcolor query( float x ) const{
+
227
+
228 assert( cmapsize>0 && !cmap.empty() );
+
229
+
230 helios::RGBcolor color;
+
231
+
232 uint color_ind;
+
233 if( minval==maxval ){
+
234 color_ind=0;
+
235 }else{
+
236 color_ind=std::round( (x-minval)/(maxval-minval) * float(cmapsize-1) );
+
237 }
238
-
239 void setRange( float min, float max ){
-
240 minval = min;
-
241 maxval = max;
-
242 }
-
243
-
244 helios::vec2 getRange() const{
-
245 return helios::make_vec2( minval, maxval );
-
246 }
-
247
-
248 float getLowerLimit() const{
-
249 return minval;
-
250 }
-
251
-
252 float getUpperLimit() const{
-
253 return maxval;
-
254 }
-
255
-
256private:
+
239 if(color_ind<0){color_ind=0;}
+
240 if(color_ind>cmapsize-1){color_ind=int(cmapsize-1);}
+
241 color.r=cmap.at(color_ind).r;
+
242 color.g=cmap.at(color_ind).g;
+
243 color.b=cmap.at(color_ind).b;
+
244
+
245 return color;
+
246
+
247 }
+
248
+
249 void setRange( float min, float max ){
+
250 minval = min;
+
251 maxval = max;
+
252 }
+
253
+
254 helios::vec2 getRange() const{
+
255 return helios::make_vec2( minval, maxval );
+
256 }
257
-
258 std::vector<helios::RGBcolor> cmap;
-
259 unsigned int cmapsize;
-
260 float minval, maxval;
+
258 float getLowerLimit() const{
+
259 return minval;
+
260 }
261
-
262};
-
263
-
265class Visualizer{
-
266public:
+
262 float getUpperLimit() const{
+
263 return maxval;
+
264 }
+
265
+
266private:
267
-
269
-
272 explicit Visualizer( uint Wdisplay );
+
268 std::vector<helios::RGBcolor> cmap;
+
269 unsigned int cmapsize;
+
270 float minval, maxval;
+
271
+
272};
+
273
-
275
-
279 Visualizer( uint Wdisplay, uint Hdisplay );
-
280
-
281 Visualizer( uint Wdisplay, uint Hdisplay, int aliasing_samples );
-
282
-
284 Visualizer( uint Wdisplay, uint Hdisplay, int aliasing_samples, bool window_decorations );
+
+
275class Visualizer{
+
276public:
+
277
+
279
+
282 explicit Visualizer( uint Wdisplay );
+
283
285
-
286 // !Visualizer destructor
-
287 ~Visualizer();
-
288
-
290 int selfTest();
-
291
-
293 void enableMessages();
-
294
-
296 void disableMessages();
-
297
-
298 /* //! Type of transformation applied to a geometric object */
-
299 /* enum TransformationMethod { */
-
300 /* //! Do not apply any coordinate transformation to positions. In this case, all positions must be between -1 and 1. */
-
301 /* NO_TRANSFORM=0, */
-
302
-
303 /* //! Apply a perspective transformation to positions according to the current view. To set the view, use \ref setCameraPosition(). */
-
304 /* PERSPECTIVE_TRANSFORM=1, */
-
305
-
306 /* //! Apply a custom transformation to all positions. */
-
307 /* CUSTOM_TRANSFORM=2 */
-
308 /* }; */
-
310 enum CoordinateSystem{
-
311
-
313 COORDINATES_WINDOW_NORMALIZED = 0,
-
314
-
316 COORDINATES_CARTESIAN = 1
-
317
-
318 };
-
319
-
321 enum Ctable{
-
323 COLORMAP_HOT = 0,
-
325 COLORMAP_COOL = 1,
-
327 COLORMAP_RAINBOW = 2,
-
329 COLORMAP_LAVA = 3,
-
331 COLORMAP_PARULA = 4,
-
333 COLORMAP_GRAY = 5,
-
335 COLORMAP_CUSTOM = 6
-
336 };
-
337
-
339
-
343 void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt );
-
344
-
346
-
351 void setCameraPosition(const helios::SphericalCoord &cameraAngle, const helios::vec3 &lookAt );
-
352
+
289 Visualizer( uint Wdisplay, uint Hdisplay );
+
290
+
291 Visualizer( uint Wdisplay, uint Hdisplay, int aliasing_samples );
+
292
+
294 Visualizer( uint Wdisplay, uint Hdisplay, int aliasing_samples, bool window_decorations );
+
295
+
296 // !Visualizer destructor
+
297 ~Visualizer();
+
298
+
300 int selfTest();
+
301
+
303 void enableMessages();
+
304
+
306 void disableMessages();
+
307
+
308 /* //! Type of transformation applied to a geometric object */
+
309 /* enum TransformationMethod { */
+
310 /* //! Do not apply any coordinate transformation to positions. In this case, all positions must be between -1 and 1. */
+
311 /* NO_TRANSFORM=0, */
+
312
+
313 /* //! Apply a perspective transformation to positions according to the current view. To set the view, use \ref setCameraPosition(). */
+
314 /* PERSPECTIVE_TRANSFORM=1, */
+
315
+
316 /* //! Apply a custom transformation to all positions. */
+
317 /* CUSTOM_TRANSFORM=2 */
+
318 /* }; */
+
+
320 enum CoordinateSystem{
+
321
+
323 COORDINATES_WINDOW_NORMALIZED = 0,
+
324
+
326 COORDINATES_CARTESIAN = 1
+
327
+
328 };
+
+
329
+ +
347
+
349
+
353 void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt );
354
-
357 void setCameraFieldOfView( float angle_FOV );
-
358
-
360
-
363 void setLightDirection(const helios::vec3 &direction );
+
356
+
361 void setCameraPosition(const helios::SphericalCoord &cameraAngle, const helios::vec3 &lookAt );
+
362
364
-
366 void getDomainBoundingBox( helios::vec2& xbounds, helios::vec2& ybounds, helios::vec2& zbounds ) const;
-
367
-
369 float getDomainBoundingRadius() const;
+
367 void setCameraFieldOfView( float angle_FOV );
+
368
370
-
372 enum LightingModel {
-
374 LIGHTING_NONE=0,
-
375
-
377 LIGHTING_PHONG=1,
-
378
-
380 LIGHTING_PHONG_SHADOWED=2
-
381 };
-
382
-
384
-
388 void setLightingModel(LightingModel lightingmodel );
-
389
-
391
-
394 void setLightIntensityFactor( float lightintensityfactor );
-
395
-
397
-
400 void setBackgroundColor(const helios::RGBcolor &color );
+
373 void setLightDirection(const helios::vec3 &direction );
+
374
+
376 void getDomainBoundingBox( helios::vec2& xbounds, helios::vec2& ybounds, helios::vec2& zbounds ) const;
+
377
+
379 float getDomainBoundingRadius() const;
+
380
+ +
392
+
394
+
398 void setLightingModel(LightingModel lightingmodel );
+
399
401
-
403
-
410 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag );
+
404 void setLightIntensityFactor( float lightintensityfactor );
+
405
+
407
+
410 void setBackgroundColor(const helios::RGBcolor &color );
411
413
-
420 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
420 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag );
421
423
-
430 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char* texture_file, CoordinateSystem coordFlag );
+
430 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
431
433
-
441 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag );
-
442
-
444
-
452 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag );
-
453
-
455
-
460 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag );
-
461
+
440 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char* texture_file, CoordinateSystem coordFlag );
+
441
+
443
+
451 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag );
+
452
+
454
+
462 void addRectangleByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag );
463
-
468 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
-
469
+
465
+
470 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag );
471
-
476 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const char* texture_file, CoordinateSystem coordFlag );
-
477
+
473
+
478 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
479
-
485 void addRectangleByVertices(const std::vector<helios::vec3>& vertices, const char* texture_file, const std::vector<helios::vec2> &uvs, CoordinateSystem coordFlag );
-
486
-
488
-
495 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, const char* texture_file, const std::vector<helios::vec2> &uvs, CoordinateSystem coordFlag );
+
481
+
486 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const char* texture_file, CoordinateSystem coordFlag );
+
487
+
489
+
495 void addRectangleByVertices(const std::vector<helios::vec3>& vertices, const char* texture_file, const std::vector<helios::vec2> &uvs, CoordinateSystem coordFlag );
496
498
-
504 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag);
-
505
-
507
-
513 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag );
-
514
-
516
-
522 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBAcolor &color, const Glyph* glyph, CoordinateSystem coordFlag );
-
523
-
525
-
532 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag );
-
533
+
505 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, const char* texture_file, const std::vector<helios::vec2> &uvs, CoordinateSystem coordFlag );
+
506
+
508
+
514 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, const char* texture_file, CoordinateSystem coordFlag);
+
515
+
517
+
523 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBcolor &color, const Glyph* glyph, CoordinateSystem coordFlag );
+
524
+
526
+
532 void addRectangleByVertices( const std::vector<helios::vec3>& vertices, const helios::RGBAcolor &color, const Glyph* glyph, CoordinateSystem coordFlag );
+
533
535
-
542 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
542 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag );
543
545
-
555 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, CoordinateSystem coordFlag );
-
556
-
558
-
569 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
-
570
-
572
-
578 void addVoxelByCenter( const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag );
-
579
-
581
-
587 void addVoxelByCenter( const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
-
588
-
590
-
597 void addDiskByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag );
+
552 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
553
+
555
+
565 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, CoordinateSystem coordFlag );
+
566
+
568
+
579 void addTriangle( const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char* texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
580
+
582
+
588 void addVoxelByCenter( const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag );
+
589
+
591
+
597 void addVoxelByCenter( const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
598
600
-
607 void addDiskByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
607 void addDiskByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag );
608
610
-
617 void addDiskByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const char* texture_file, CoordinateSystem coordFlag );
+
617 void addDiskByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
618
620
-
627 void addLine( const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag );
+
627 void addDiskByCenter( const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const char* texture_file, CoordinateSystem coordFlag );
628
630
-
637 void addLine( const helios::vec3 &start, const helios::vec3 &end, const helios::RGBAcolor &color, uint linewidth, CoordinateSystem coordFlag );
+
637 void addLine( const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag );
638
640
-
646 void addPoint( const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag);
-
647
-
649
-
655 void addPoint( const helios::vec3 &position, const helios::RGBAcolor &color, uint pointsize, CoordinateSystem coordFlag );
-
656
-
658
-
665 void addSphereByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag );
-
666
+
647 void addLine( const helios::vec3 &start, const helios::vec3 &end, const helios::RGBAcolor &color, uint linewidth, CoordinateSystem coordFlag );
+
648
+
650
+
656 void addPoint( const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag);
+
657
+
659
+
665 void addPoint( const helios::vec3 &position, const helios::RGBAcolor &color, uint pointsize, CoordinateSystem coordFlag );
+
666
668
-
675 void addSphereByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
675 void addSphereByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag );
676
678
-
684 void addSkyDomeByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const char* texture_file );
-
685
-
687
-
688 DEPRECATED( void addSkyDomeByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const char* texture_file, int layer ) );
-
689
-
691
-
699 void addTextboxByCenter( const char* textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char* fontname, CoordinateSystem coordFlag );
-
700
-
702 void addCoordinateAxes();
-
703
-
705
-
710 void addCoordinateAxes(const helios::vec3 &origin, const helios::vec3 &length, const std::string &sign);
-
711
+
685 void addSphereByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag );
+
686
+
688
+
694 void addSkyDomeByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const char* texture_file );
+
695
+
697
+
698 DEPRECATED( void addSkyDomeByCenter( float radius, const helios::vec3 &center, uint Ndivisions, const char* texture_file, int layer ) );
+
699
+
701
+
709 void addTextboxByCenter( const char* textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char* fontname, CoordinateSystem coordFlag );
+
710
+
712 void addCoordinateAxes();
713
-
718 void addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv);
-
719
-
721 void enableColorbar();
-
722
-
724 void disableColorbar();
-
725
-
727
-
730 void setColorbarPosition( helios::vec3 position );
-
731
-
733
-
736 void setColorbarSize( helios::vec2 size );
+
715
+
720 void addCoordinateAxes(const helios::vec3 &origin, const helios::vec3 &length, const std::string &sign);
+
721
+
723
+
728 void addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv);
+
729
+
731 void enableColorbar();
+
732
+
734 void disableColorbar();
+
735
737
-
739
-
743 void setColorbarRange( float cmin, float cmax );
-
744
-
746
-
750 void setColorbarTicks(const std::vector<float> &ticks );
-
751
-
753
-
756 void setColorbarTitle( const char* title );
-
757
-
759
-
762 void setColorbarFontColor( helios::RGBcolor color );
+
740 void setColorbarPosition( helios::vec3 position );
+
741
+
743
+
746 void setColorbarSize( helios::vec2 size );
+
747
+
749
+
753 void setColorbarRange( float cmin, float cmax );
+
754
+
756
+
760 void setColorbarTicks(const std::vector<float> &ticks );
+
761
763
-
765
-
768 void setColorbarFontSize( uint font_size );
+
766 void setColorbarTitle( const char* title );
+
767
769
-
771
-
775 void setColormap( Ctable colormap_name );
-
776
-
778
-
782 void setColormap(const std::vector<helios::RGBcolor> &colors, const std::vector<float> &divisions );
-
783
-
785 Colormap getCurrentColormap() const;
-
786
+
772 void setColorbarFontColor( helios::RGBcolor color );
+
773
+
775
+
778 void setColorbarFontSize( uint font_size );
+
779
+
781
+
785 void setColormap( Ctable colormap_name );
+
786
788
-
791 void buildContextGeometry( helios::Context* context_ptr );
-
792
-
794
-
798 void buildContextGeometry(helios::Context* context_ptr, const std::vector<uint>& UUIDs );
-
799
-
801
-
805 void colorContextPrimitivesByData( const char* data_name );
-
806
-
808
-
813 void colorContextPrimitivesByData( const char* data_name, const std::vector<uint>& UUIDs );
-
814
+
792 void setColormap(const std::vector<helios::RGBcolor> &colors, const std::vector<float> &divisions );
+
793
+
795 Colormap getCurrentColormap() const;
+
796
+
798
+
801 void buildContextGeometry( helios::Context* context_ptr );
+
802
+
804
+
808 void buildContextGeometry(helios::Context* context_ptr, const std::vector<uint>& UUIDs );
+
809
+
811
+
815 void colorContextPrimitivesByData( const char* data_name );
816
-
820 void colorContextPrimitivesByObjectData( const char* data_name );
-
821
-
823
-
828 void colorContextPrimitivesByObjectData( const char* data_name, const std::vector<uint>& ObjIDs );
-
829
+
818
+
823 void colorContextPrimitivesByData( const char* data_name, const std::vector<uint>& UUIDs );
+
824
+
826
+
830 void colorContextPrimitivesByObjectData( const char* data_name );
831
-
835 void colorContextPrimitivesRandomly(const std::vector<uint>& UUIDs );
-
836
-
838
-
841 void colorContextPrimitivesRandomly();
-
842
-
844
-
847 void colorContextObjectsRandomly(const std::vector<uint>& ObjIDs );
-
848
-
850
-
853 void colorContextObjectsRandomly();
-
854
-
855
-
857 void hideWatermark();
-
858
-
860 void showWatermark();
-
861
-
863 std::vector<helios::vec3> plotInteractive();
-
864
-
866 void plotDepthMap();
-
867
-
869 void plotUpdate();
-
870
-
872
-
875 void plotUpdate( bool hide_window );
-
876
-
878 void printWindow();
-
879
-
881
-
885 void printWindow( const char* outfile );
+
833
+
838 void colorContextPrimitivesByObjectData( const char* data_name, const std::vector<uint>& ObjIDs );
+
839
+
841
+
845 void colorContextPrimitivesRandomly(const std::vector<uint>& UUIDs );
+
846
+
848
+
851 void colorContextPrimitivesRandomly();
+
852
+
854
+
857 void colorContextObjectsRandomly(const std::vector<uint>& ObjIDs );
+
858
+
860
+
863 void colorContextObjectsRandomly();
+
864
+
865
+
867 void hideWatermark();
+
868
+
870 void showWatermark();
+
871
+
873 std::vector<helios::vec3> plotInteractive();
+
874
+
876 void plotDepthMap();
+
877
+
879 void plotUpdate();
+
880
+
882
+
885 void plotUpdate( bool hide_window );
886
-
888
-
891 void getWindowPixelsRGB( uint * buffer );
-
892
-
894
-
898 void getDepthMap( float * buffer );
-
899
-
901
-
905 void getWindowSize( uint &width, uint &height ) const;
-
906
-
908
-
912 void getFramebufferSize( uint &width, uint &height ) const;
-
913
-
915 void clearGeometry();
+
888 void printWindow();
+
889
+
891
+
895 void printWindow( const char* outfile );
+
896
+
898
+
901 void getWindowPixelsRGB( uint * buffer );
+
902
+
904
+
908 void getDepthMap( float * buffer );
+
909
+
911
+
915 void getWindowSize( uint &width, uint &height ) const;
916
-
918 void closeWindow();
-
919
-
920private:
-
921
-
922 void openWindow();
+
918
+
922 void getFramebufferSize( uint &width, uint &height ) const;
923
-
924 void initialize(uint window_width_pixels, uint window_height_pixels, int aliasing_samples, bool window_decorations );
-
925
-
926 void render( bool shadow );
-
927
-
928 void setupPlot();
-
929
-
930 //~~~~~~~~~~~~~~~~ Primitives ~~~~~~~~~~~~~~~~~~~~//
+
925 void clearGeometry();
+
926
+
928 void closeWindow();
+
929
+
930private:
931
-
932 std::string colorPrimitivesByObjectData,colorPrimitivesByData;
-
933 std::map<uint,uint> colorPrimitives_UUIDs, colorPrimitives_objIDs;
-
934
-
935 std::vector<int> contextPrimitiveIDs;
-
936
-
937 std::vector<float> depth_buffer_data;
-
938
-
939 std::map<uint,helios::int2> group_start;
-
940
-
941 void getViewKeystrokes( helios::vec3& eye, helios::vec3& center );
-
942
-
944 void addColorbarByCenter(const char* title, const helios::vec2 &size, const helios::vec3 &center, const helios::RGBcolor &font_color, const Colormap &colormap );
-
945
-
947 uint Wdisplay;
-
949 uint Hdisplay;
+
932 void openWindow();
+
933
+
934 void initialize(uint window_width_pixels, uint window_height_pixels, int aliasing_samples, bool window_decorations );
+
935
+
936 void render( bool shadow );
+
937
+
938 void setupPlot();
+
939
+
940 //~~~~~~~~~~~~~~~~ Primitives ~~~~~~~~~~~~~~~~~~~~//
+
941
+
942 std::string colorPrimitivesByObjectData,colorPrimitivesByData;
+
943 std::map<uint,uint> colorPrimitives_UUIDs, colorPrimitives_objIDs;
+
944
+
945 std::vector<int> contextPrimitiveIDs;
+
946
+
947 std::vector<float> depth_buffer_data;
+
948
+
949 std::map<uint,helios::int2> group_start;
950
-
952 uint Wframebuffer;
-
954 uint Hframebuffer;
+
951 void getViewKeystrokes( helios::vec3& eye, helios::vec3& center );
+
952
+
954 void addColorbarByCenter(const char* title, const helios::vec2 &size, const helios::vec3 &center, const helios::RGBcolor &font_color, const Colormap &colormap );
955
-
956 uint frame_counter;
-
957
-
959
-
960 void* window;
-
961
-
963 helios::vec3 camera_lookat_center;
-
964
-
966 helios::vec3 camera_eye_location;
+
957 uint Wdisplay;
+
959 uint Hdisplay;
+
960
+
962 uint Wframebuffer;
+
964 uint Hframebuffer;
+
965
+
966 uint frame_counter;
967
-
969 Shader primaryShader;
-
970
-
972 Shader depthShader;
-
973
-
974 Shader* currentShader;
-
975
-
976 uint framebufferID;
-
977 uint depthTexture;
-
978
-
980 std::vector<LightingModel> primaryLightingModel;
-
981
-
982 float lightintensity = 1.f;
+
969
+
970 void* window;
+
971
+
973 helios::vec3 camera_lookat_center;
+
974
+
976 helios::vec3 camera_eye_location;
+
977
+
979 Shader primaryShader;
+
980
+
982 Shader depthShader;
983
-
984 bool isWatermarkVisible;
+
984 Shader* currentShader;
985
-
987 helios::RGBcolor backgroundColor;
+
986 uint framebufferID;
+
987 uint depthTexture;
988
-
990 helios::vec3 light_direction;
+
990 std::vector<LightingModel> primaryLightingModel;
991
+
992 float lightintensity = 1.f;
993
-
994 uint colorbar_flag;
+
994 bool isWatermarkVisible;
995
-
997 std::string colorbar_title;
+
997 helios::RGBcolor backgroundColor;
998
-
1000 uint colorbar_fontsize;
+
1000 helios::vec3 light_direction;
1001
-
1003 uint point_width;
-
1004
-
1006 uint line_width;
-
1007
-
1009 helios::RGBcolor colorbar_fontcolor;
-
1010
-
1012 helios::vec3 colorbar_position;
-
1013
-
1015 helios::vec2 colorbar_size;
-
1016
-
1017 uint positionBuffer, colorBuffer, normalBuffer, uvBuffer, textureFlagBuffer, coordinateFlagBuffer;
-
1018 std::map<std::string,std::vector<float> > positionData, colorData, normalData, uvData;
-
1019 std::map<std::string,std::vector<int> > coordinateFlagData, textureFlagData, textureIDData;
+
1003
+
1004 uint colorbar_flag;
+
1005
+
1007 std::string colorbar_title;
+
1008
+
1010 uint colorbar_fontsize;
+
1011
+
1013 uint point_width;
+
1014
+
1016 uint line_width;
+
1017
+
1019 helios::RGBcolor colorbar_fontcolor;
1020
-
1021 void updatePerspectiveTransformation(const helios::vec3 &center, const helios::vec3 &eye );
-
1022
-
1023 glm::mat4 perspectiveTransformationMatrix;
-
1024
-
1025 void updateCustomTransformation(const glm::mat4 &matrix );
+
1022 helios::vec3 colorbar_position;
+
1023
+
1025 helios::vec2 colorbar_size;
1026
-
1027 glm::mat4 customTransformationMatrix;
-
1028
-
1030 float camera_FOV;
-
1031
-
1032 bool contextGeomNeedsUpdate;
-
1033
-
1034 bool primitiveColorsNeedUpdate;
-
1035
-
1036 helios::Context* context;
-
1037
-
1039 void buildContextGeometry_private();
-
1040
-
1041 float colorbar_min;
-
1042 float colorbar_max;
-
1043 std::vector<float> colorbar_ticks;
-
1044
-
1046 Colormap colormap_current;
+
1027 uint positionBuffer, colorBuffer, normalBuffer, uvBuffer, textureFlagBuffer, coordinateFlagBuffer;
+
1028 std::map<std::string,std::vector<float> > positionData, colorData, normalData, uvData;
+
1029 std::map<std::string,std::vector<int> > coordinateFlagData, textureFlagData, textureIDData;
+
1030
+
1031 void updatePerspectiveTransformation(const helios::vec3 &center, const helios::vec3 &eye );
+
1032
+
1033 glm::mat4 perspectiveTransformationMatrix;
+
1034
+
1035 void updateCustomTransformation(const glm::mat4 &matrix );
+
1036
+
1037 glm::mat4 customTransformationMatrix;
+
1038
+
1040 float camera_FOV;
+
1041
+
1042 bool contextGeomNeedsUpdate;
+
1043
+
1044 bool primitiveColorsNeedUpdate;
+
1045
+
1046 helios::Context* context;
1047
-
1049 Colormap colormap_hot;
+
1049 void buildContextGeometry_private();
1050
-
1052 Colormap colormap_cool;
-
1053
-
1055 Colormap colormap_lava;
-
1056
-
1058 Colormap colormap_rainbow;
-
1059
-
1061 Colormap colormap_parula;
-
1062
-
1064 Colormap colormap_gray;
-
1065
-
1066 bool message_flag;
-
1067
-
1068
-
1069};
-
1070
-
1071int checkerrors();
+
1051 float colorbar_min;
+
1052 float colorbar_max;
+
1053 std::vector<float> colorbar_ticks;
+
1054
+
1056 Colormap colormap_current;
+
1057
+
1059 Colormap colormap_hot;
+
1060
+
1062 Colormap colormap_cool;
+
1063
+
1065 Colormap colormap_lava;
+
1066
+
1068 Colormap colormap_rainbow;
+
1069
+
1071 Colormap colormap_parula;
1072
-
1073
-
1074#endif
+
1074 Colormap colormap_gray;
+
1075
+
1076 bool message_flag;
+
1077
+
1078
+
1079};
+
+
1080
+
1081
+
1082int checkerrors();
+
1083
+
1084
+
1085#endif
-
read_png_file
void read_png_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a PNG image.
Definition: Visualizer.cpp:268
-
read_JPEG_file
int read_JPEG_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a JPEG image.
Definition: Visualizer.cpp:62
-
write_JPEG_file
int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages=true)
Write current graphics window to a JPEG image file.
Definition: Visualizer.cpp:130
-
Glyph
Glyph object - 2D matrix shape.
Definition: Visualizer.h:67
-
Visualizer
Class for visualization of simulation results.
Definition: Visualizer.h:265
-
Visualizer::enableColorbar
void enableColorbar()
Enable the colorbar.
Definition: Visualizer.cpp:2590
-
Visualizer::CoordinateSystem
CoordinateSystem
Coordinate system to be used when specifying spatial coordinates.
Definition: Visualizer.h:310
-
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition: Visualizer.h:316
-
Visualizer::COORDINATES_WINDOW_NORMALIZED
@ COORDINATES_WINDOW_NORMALIZED
Coordinates are normalized to unity and are window-aligned. The point (x,y)=(0,0) is in the bottom le...
Definition: Visualizer.h:313
-
Visualizer::Ctable
Ctable
Pseudocolor map tables.
Definition: Visualizer.h:321
-
Visualizer::COLORMAP_HOT
@ COLORMAP_HOT
"Hot" colormap
Definition: Visualizer.h:323
-
Visualizer::COLORMAP_COOL
@ COLORMAP_COOL
"Cool" colormap
Definition: Visualizer.h:325
-
Visualizer::COLORMAP_CUSTOM
@ COLORMAP_CUSTOM
Custom colormap.
Definition: Visualizer.h:335
-
Visualizer::COLORMAP_GRAY
@ COLORMAP_GRAY
"Gray" colormap
Definition: Visualizer.h:333
-
Visualizer::COLORMAP_PARULA
@ COLORMAP_PARULA
"Parula" colormap
Definition: Visualizer.h:331
-
Visualizer::COLORMAP_RAINBOW
@ COLORMAP_RAINBOW
"Rainbow" colormap
Definition: Visualizer.h:327
-
Visualizer::COLORMAP_LAVA
@ COLORMAP_LAVA
"Lava" colormap
Definition: Visualizer.h:329
-
Visualizer::colorContextPrimitivesByData
void colorContextPrimitivesByData(const char *data_name)
Color primitives from Context by color mapping their ‘Primitive Data’.
Definition: Visualizer.cpp:3169
-
Visualizer::plotDepthMap
void plotDepthMap()
Plot the depth map (distance from camera to nearest object)
Definition: Visualizer.cpp:3722
-
Visualizer::getWindowPixelsRGB
void getWindowPixelsRGB(uint *buffer)
Get R-G-B pixel data in the current display window.
Definition: Visualizer.cpp:899
-
Visualizer::colorContextObjectsRandomly
void colorContextObjectsRandomly()
Color objects from Context with a random color.
Definition: Visualizer.cpp:3272
-
Visualizer::selfTest
int selfTest()
Visualizer self-test routine.
Definition: Visualizer.cpp:690
-
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition: Visualizer.cpp:2104
-
Visualizer::printWindow
void printWindow()
Print the current graphics window to a JPEG image file. File will be given a default filename and sav...
Definition: Visualizer.cpp:875
-
Visualizer::addTextboxByCenter
void addTextboxByCenter(const char *textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char *fontname, CoordinateSystem coordFlag)
Add a text box by giving the coordinates of its center.
Definition: Visualizer.cpp:2293
-
Visualizer::showWatermark
void showWatermark()
Make Helios logo watermark visible.
Definition: Visualizer.cpp:982
-
Visualizer::addTriangle
void addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a triangle by giving the coordinates of its three vertices.
Definition: Visualizer.cpp:1575
-
Visualizer::disableColorbar
void disableColorbar()
Disable the colorbar.
Definition: Visualizer.cpp:2594
-
Visualizer::setColorbarFontSize
void setColorbarFontSize(uint font_size)
Set the font size of the colorbar text.
Definition: Visualizer.cpp:2654
-
Visualizer::setColorbarFontColor
void setColorbarFontColor(helios::RGBcolor color)
Set the RGB color of the colorbar text.
Definition: Visualizer.cpp:2661
-
Visualizer::buildContextGeometry
void buildContextGeometry(helios::Context *context_ptr)
Add all geometry from the Context to the visualizer.
Definition: Visualizer.cpp:2701
-
Visualizer::addLine
void addLine(const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
Add Lines by giving the coordinates of points along the Lines.
Definition: Visualizer.cpp:2045
-
Visualizer::setLightDirection
void setLightDirection(const helios::vec3 &direction)
Set the direction of the light source.
Definition: Visualizer.cpp:788
-
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition: Visualizer.cpp:1851
-
Visualizer::setCameraFieldOfView
void setCameraFieldOfView(float angle_FOV)
Set the camera field of view (angle width) in degrees. Default value is 45 degrees.
Definition: Visualizer.cpp:784
-
Visualizer::LightingModel
LightingModel
Lighting model to use for shading primitives.
Definition: Visualizer.h:372
-
Visualizer::LIGHTING_NONE
@ LIGHTING_NONE
No shading, primitive is colored by its diffuse color.
Definition: Visualizer.h:374
-
Visualizer::LIGHTING_PHONG
@ LIGHTING_PHONG
Phong lighting model is applied to add shading effects to the diffuse color.
Definition: Visualizer.h:377
-
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition: Visualizer.h:380
+
read_png_file
void read_png_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a PNG image.
Definition Visualizer.cpp:268
+
read_JPEG_file
int read_JPEG_file(const char *filename, std::vector< unsigned char > &texture, uint &height, uint &width)
Function to create a texture map from a JPEG image.
Definition Visualizer.cpp:62
+
cursorCallback
void cursorCallback(GLFWwindow *window, double x, double y)
Callback function for mouse cursor movements.
Definition Visualizer.cpp:4353
+
mouseCallback
void mouseCallback(GLFWwindow *window, int button, int action, int mods)
Callback function for mouse button presses.
Definition Visualizer.cpp:4339
+
write_JPEG_file
int write_JPEG_file(const char *filename, uint width, uint height, void *_window, bool print_messages=true)
Write current graphics window to a JPEG image file.
Definition Visualizer.cpp:130
+
scrollCallback
void scrollCallback(GLFWwindow *window, double xoffset, double yoffset)
Callback function for mouse scroll.
Definition Visualizer.cpp:4371
+
Glyph
Glyph object - 2D matrix shape.
Definition Visualizer.h:77
+
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+
Visualizer::enableColorbar
void enableColorbar()
Enable the colorbar.
Definition Visualizer.cpp:2594
+
Visualizer::CoordinateSystem
CoordinateSystem
Coordinate system to be used when specifying spatial coordinates.
Definition Visualizer.h:320
+
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition Visualizer.h:326
+
Visualizer::COORDINATES_WINDOW_NORMALIZED
@ COORDINATES_WINDOW_NORMALIZED
Coordinates are normalized to unity and are window-aligned. The point (x,y)=(0,0) is in the bottom le...
Definition Visualizer.h:323
+
Visualizer::Ctable
Ctable
Pseudocolor map tables.
Definition Visualizer.h:331
+
Visualizer::COLORMAP_HOT
@ COLORMAP_HOT
"Hot" colormap
Definition Visualizer.h:333
+
Visualizer::COLORMAP_COOL
@ COLORMAP_COOL
"Cool" colormap
Definition Visualizer.h:335
+
Visualizer::COLORMAP_CUSTOM
@ COLORMAP_CUSTOM
Custom colormap.
Definition Visualizer.h:345
+
Visualizer::COLORMAP_GRAY
@ COLORMAP_GRAY
"Gray" colormap
Definition Visualizer.h:343
+
Visualizer::COLORMAP_PARULA
@ COLORMAP_PARULA
"Parula" colormap
Definition Visualizer.h:341
+
Visualizer::COLORMAP_RAINBOW
@ COLORMAP_RAINBOW
"Rainbow" colormap
Definition Visualizer.h:337
+
Visualizer::COLORMAP_LAVA
@ COLORMAP_LAVA
"Lava" colormap
Definition Visualizer.h:339
+
Visualizer::colorContextPrimitivesByData
void colorContextPrimitivesByData(const char *data_name)
Color primitives from Context by color mapping their ‘Primitive Data’.
Definition Visualizer.cpp:3173
+
Visualizer::plotDepthMap
void plotDepthMap()
Plot the depth map (distance from camera to nearest object)
Definition Visualizer.cpp:3733
+
Visualizer::getWindowPixelsRGB
void getWindowPixelsRGB(uint *buffer)
Get R-G-B pixel data in the current display window.
Definition Visualizer.cpp:903
+
Visualizer::colorContextObjectsRandomly
void colorContextObjectsRandomly()
Color objects from Context with a random color.
Definition Visualizer.cpp:3276
+
Visualizer::selfTest
int selfTest()
Visualizer self-test routine.
Definition Visualizer.cpp:694
+
Visualizer::addPoint
void addPoint(const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
Add a point by giving its coordinates and size.
Definition Visualizer.cpp:2108
+
Visualizer::printWindow
void printWindow()
Print the current graphics window to a JPEG image file. File will be given a default filename and sav...
Definition Visualizer.cpp:879
+
Visualizer::addTextboxByCenter
void addTextboxByCenter(const char *textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char *fontname, CoordinateSystem coordFlag)
Add a text box by giving the coordinates of its center.
Definition Visualizer.cpp:2297
+
Visualizer::showWatermark
void showWatermark()
Make Helios logo watermark visible.
Definition Visualizer.cpp:986
+
Visualizer::addTriangle
void addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a triangle by giving the coordinates of its three vertices.
Definition Visualizer.cpp:1579
+
Visualizer::disableColorbar
void disableColorbar()
Disable the colorbar.
Definition Visualizer.cpp:2598
+
Visualizer::setColorbarFontSize
void setColorbarFontSize(uint font_size)
Set the font size of the colorbar text.
Definition Visualizer.cpp:2658
+
Visualizer::setColorbarFontColor
void setColorbarFontColor(helios::RGBcolor color)
Set the RGB color of the colorbar text.
Definition Visualizer.cpp:2665
+
Visualizer::buildContextGeometry
void buildContextGeometry(helios::Context *context_ptr)
Add all geometry from the Context to the visualizer.
Definition Visualizer.cpp:2705
+
Visualizer::addLine
void addLine(const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
Add Lines by giving the coordinates of points along the Lines.
Definition Visualizer.cpp:2049
+
Visualizer::setLightDirection
void setLightDirection(const helios::vec3 &direction)
Set the direction of the light source.
Definition Visualizer.cpp:792
+
Visualizer::addVoxelByCenter
void addVoxelByCenter(const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a voxel by giving the coordinates of its center.
Definition Visualizer.cpp:1855
+
Visualizer::setCameraFieldOfView
void setCameraFieldOfView(float angle_FOV)
Set the camera field of view (angle width) in degrees. Default value is 45 degrees.
Definition Visualizer.cpp:788
+
Visualizer::LightingModel
LightingModel
Lighting model to use for shading primitives.
Definition Visualizer.h:382
+
Visualizer::LIGHTING_NONE
@ LIGHTING_NONE
No shading, primitive is colored by its diffuse color.
Definition Visualizer.h:384
+
Visualizer::LIGHTING_PHONG
@ LIGHTING_PHONG
Phong lighting model is applied to add shading effects to the diffuse color.
Definition Visualizer.h:387
+
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition Visualizer.h:390
Visualizer::DEPRECATED
DEPRECATED(void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file, int layer))
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
-
Visualizer::closeWindow
void closeWindow()
Close the graphics window.
Definition: Visualizer.cpp:973
-
Visualizer::addGridWireFrame
void addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv)
Add a coordinate axis.
Definition: Visualizer.cpp:2554
-
Visualizer::addSphereByCenter
void addSphereByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a sphere by giving the radius and center.
Definition: Visualizer.cpp:2151
-
Visualizer::setBackgroundColor
void setBackgroundColor(const helios::RGBcolor &color)
Set the background color for the visualizer window.
Definition: Visualizer.cpp:871
-
Visualizer::clearGeometry
void clearGeometry()
Clear all geometry previously added to the visualizer.
Definition: Visualizer.cpp:955
-
Visualizer::getDomainBoundingRadius
float getDomainBoundingRadius() const
Get the radius of a sphere that bounds all primitives in the domain.
Definition: Visualizer.cpp:847
-
Visualizer::getDepthMap
void getDepthMap(float *buffer)
Get depth buffer data for the current display window.
Definition: Visualizer.cpp:930
-
Visualizer::setColorbarSize
void setColorbarSize(helios::vec2 size)
Set the size of the colorbar in normalized window units (0-1)
Definition: Visualizer.cpp:2605
-
Visualizer::addCoordinateAxes
void addCoordinateAxes()
Add a coordinate axis with at the origin with unit length.
Definition: Visualizer.cpp:2512
-
Visualizer::hideWatermark
void hideWatermark()
Make Helios logo watermark invisible.
Definition: Visualizer.cpp:978
-
Visualizer::setColormap
void setColormap(Ctable colormap_name)
Set the colormap used in Colorbar/visualization based on pre-defined colormaps.
Definition: Visualizer.cpp:2665
-
Visualizer::plotUpdate
void plotUpdate()
Update the graphics window based on current geometry, then continue the program.
Definition: Visualizer.cpp:3578
-
Visualizer::setColorbarTicks
void setColorbarTicks(const std::vector< float > &ticks)
Set the values in the colorbar where ticks and labels should be placed.
Definition: Visualizer.cpp:2621
-
Visualizer::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition: Visualizer.cpp:766
-
Visualizer::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition: Visualizer.cpp:770
-
Visualizer::getFramebufferSize
void getFramebufferSize(uint &width, uint &height) const
Get the size of the framebuffer in pixels.
Definition: Visualizer.cpp:950
-
Visualizer::plotInteractive
std::vector< helios::vec3 > plotInteractive()
Plot current geometry into an interactive graphics window.
Definition: Visualizer.cpp:3295
-
Visualizer::addSkyDomeByCenter
void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
Definition: Visualizer.cpp:2200
-
Visualizer::setColorbarRange
void setColorbarRange(float cmin, float cmax)
Set the range of the Colorbar.
Definition: Visualizer.cpp:2612
-
Visualizer::setCameraPosition
void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
Set camera position.
Definition: Visualizer.cpp:774
-
Visualizer::addRectangleByVertices
void addRectangleByVertices(const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its four vertices.
Definition: Visualizer.cpp:1119
-
Visualizer::colorContextPrimitivesRandomly
void colorContextPrimitivesRandomly()
Color primitives from Context with a random color.
Definition: Visualizer.cpp:3234
-
Visualizer::addRectangleByCenter
void addRectangleByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its center.
Definition: Visualizer.cpp:999
-
Visualizer::addDiskByCenter
void addDiskByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a disk by giving the coordinates of its center.
Definition: Visualizer.cpp:1881
-
Visualizer::setColorbarPosition
void setColorbarPosition(helios::vec3 position)
Set the position of the colorbar in normalized window coordinates (0-1)
Definition: Visualizer.cpp:2598
-
Visualizer::colorContextPrimitivesByObjectData
void colorContextPrimitivesByObjectData(const char *data_name)
Color primitives from Context by color mapping their ‘Object Data’.
Definition: Visualizer.cpp:3191
-
Visualizer::setLightIntensityFactor
void setLightIntensityFactor(float lightintensityfactor)
Set the light intensity scaling factor.
Definition: Visualizer.cpp:867
-
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition: Visualizer.cpp:2697
-
Visualizer::setColorbarTitle
void setColorbarTitle(const char *title)
Set the title of the Colorbar.
Definition: Visualizer.cpp:2650
-
Visualizer::getWindowSize
void getWindowSize(uint &width, uint &height) const
Get the size of the display window in pixels.
Definition: Visualizer.cpp:945
-
Visualizer::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition: Visualizer.cpp:795
-
Visualizer::setLightingModel
void setLightingModel(LightingModel lightingmodel)
Set the lighting model for shading of all primitives.
Definition: Visualizer.cpp:861
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
Colormap
RGB color map.
Definition: Visualizer.h:165
-
Shader
OpenGL Shader data structure.
Definition: Visualizer.h:80
-
Shader::useShader
void useShader() const
Set shader as current.
Definition: Visualizer.cpp:4315
-
Shader::setLightingModel
void setLightingModel(uint lightingmodel) const
Set the lighting model.
Definition: Visualizer.cpp:4307
-
Shader::setDepthBiasMatrix
void setDepthBiasMatrix(const glm::mat4 &matrix) const
Set the depth bias matrix for shadows.
Definition: Visualizer.cpp:4299
-
Shader::initialize
void initialize(const char *vertex_shader_file, const char *fragment_shader_file)
Initialize the shader.
Definition: Visualizer.cpp:3920
-
Shader::setLightDirection
void setLightDirection(const helios::vec3 &direction) const
Set the direction of the light (sun)
Definition: Visualizer.cpp:4303
-
Shader::enableTextureMasks
void enableTextureMasks() const
Enable texture masks and color fragments by interpolating vertex colors.
Definition: Visualizer.cpp:4280
-
Shader::disableTextures
void disableTextures() const
Disable texture maps and color fragments by interpolating vertex colors.
Definition: Visualizer.cpp:4076
-
Shader::setTextureMask
void setTextureMask(const Glyph *glyph, uint &textureID)
Set fragment opacity using a Glyph (red channel)
Definition: Visualizer.cpp:4176
-
Shader::enableTextureMaps
void enableTextureMaps() const
Enable texture maps and color fragments using an RGB texture map.
Definition: Visualizer.cpp:4160
-
Shader::setTextureMap
void setTextureMap(const char *texture_file, uint &textureID, helios::int2 &texture_size)
Color fragments using an RGB texture map.
Definition: Visualizer.cpp:4081
-
Shader::setLightIntensity
void setLightIntensity(float lightintensity) const
Set the intensity of the light source.
Definition: Visualizer.cpp:4311
-
Shader::setTransformationMatrix
void setTransformationMatrix(const glm::mat4 &matrix) const
Set the shader transformation matrix, i.e., the Affine transformation applied to all vertices.
Definition: Visualizer.cpp:4295
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+
Visualizer::closeWindow
void closeWindow()
Close the graphics window.
Definition Visualizer.cpp:977
+
Visualizer::addGridWireFrame
void addGridWireFrame(const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv)
Add a coordinate axis.
Definition Visualizer.cpp:2558
+
Visualizer::addSphereByCenter
void addSphereByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a sphere by giving the radius and center.
Definition Visualizer.cpp:2155
+
Visualizer::setBackgroundColor
void setBackgroundColor(const helios::RGBcolor &color)
Set the background color for the visualizer window.
Definition Visualizer.cpp:875
+
Visualizer::clearGeometry
void clearGeometry()
Clear all geometry previously added to the visualizer.
Definition Visualizer.cpp:959
+
Visualizer::getDomainBoundingRadius
float getDomainBoundingRadius() const
Get the radius of a sphere that bounds all primitives in the domain.
Definition Visualizer.cpp:851
+
Visualizer::getDepthMap
void getDepthMap(float *buffer)
Get depth buffer data for the current display window.
Definition Visualizer.cpp:934
+
Visualizer::setColorbarSize
void setColorbarSize(helios::vec2 size)
Set the size of the colorbar in normalized window units (0-1)
Definition Visualizer.cpp:2609
+
Visualizer::addCoordinateAxes
void addCoordinateAxes()
Add a coordinate axis with at the origin with unit length.
Definition Visualizer.cpp:2516
+
Visualizer::hideWatermark
void hideWatermark()
Make Helios logo watermark invisible.
Definition Visualizer.cpp:982
+
Visualizer::Visualizer
Visualizer(uint Wdisplay)
Visualizer constructor.
Definition Visualizer.cpp:358
+
Visualizer::setColormap
void setColormap(Ctable colormap_name)
Set the colormap used in Colorbar/visualization based on pre-defined colormaps.
Definition Visualizer.cpp:2669
+
Visualizer::plotUpdate
void plotUpdate()
Update the graphics window based on current geometry, then continue the program.
Definition Visualizer.cpp:3589
+
Visualizer::setColorbarTicks
void setColorbarTicks(const std::vector< float > &ticks)
Set the values in the colorbar where ticks and labels should be placed.
Definition Visualizer.cpp:2625
+
Visualizer::enableMessages
void enableMessages()
Enable standard output from this plug-in (default)
Definition Visualizer.cpp:770
+
Visualizer::disableMessages
void disableMessages()
Disable standard output from this plug-in.
Definition Visualizer.cpp:774
+
Visualizer::getFramebufferSize
void getFramebufferSize(uint &width, uint &height) const
Get the size of the framebuffer in pixels.
Definition Visualizer.cpp:954
+
Visualizer::plotInteractive
std::vector< helios::vec3 > plotInteractive()
Plot current geometry into an interactive graphics window.
Definition Visualizer.cpp:3306
+
Visualizer::addSkyDomeByCenter
void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
Definition Visualizer.cpp:2204
+
Visualizer::setColorbarRange
void setColorbarRange(float cmin, float cmax)
Set the range of the Colorbar.
Definition Visualizer.cpp:2616
+
Visualizer::setCameraPosition
void setCameraPosition(const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
Set camera position.
Definition Visualizer.cpp:778
+
Visualizer::addRectangleByVertices
void addRectangleByVertices(const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its four vertices.
Definition Visualizer.cpp:1123
+
Visualizer::colorContextPrimitivesRandomly
void colorContextPrimitivesRandomly()
Color primitives from Context with a random color.
Definition Visualizer.cpp:3238
+
Visualizer::addRectangleByCenter
void addRectangleByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a rectangle by giving the coordinates of its center.
Definition Visualizer.cpp:1003
+
Visualizer::addDiskByCenter
void addDiskByCenter(const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
Add a disk by giving the coordinates of its center.
Definition Visualizer.cpp:1885
+
Visualizer::setColorbarPosition
void setColorbarPosition(helios::vec3 position)
Set the position of the colorbar in normalized window coordinates (0-1)
Definition Visualizer.cpp:2602
+
Visualizer::colorContextPrimitivesByObjectData
void colorContextPrimitivesByObjectData(const char *data_name)
Color primitives from Context by color mapping their ‘Object Data’.
Definition Visualizer.cpp:3195
+
Visualizer::setLightIntensityFactor
void setLightIntensityFactor(float lightintensityfactor)
Set the light intensity scaling factor.
Definition Visualizer.cpp:871
+
Visualizer::getCurrentColormap
Colormap getCurrentColormap() const
Get the current colormap used in Colorbar/visualization.
Definition Visualizer.cpp:2701
+
Visualizer::setColorbarTitle
void setColorbarTitle(const char *title)
Set the title of the Colorbar.
Definition Visualizer.cpp:2654
+
Visualizer::getWindowSize
void getWindowSize(uint &width, uint &height) const
Get the size of the display window in pixels.
Definition Visualizer.cpp:949
+
Visualizer::getDomainBoundingBox
void getDomainBoundingBox(helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
Get a box that bounds all primitives in the domain.
Definition Visualizer.cpp:799
+
Visualizer::setLightingModel
void setLightingModel(LightingModel lightingmodel)
Set the lighting model for shading of all primitives.
Definition Visualizer.cpp:865
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
Colormap
RGB color map.
Definition Visualizer.h:175
+
Shader
OpenGL Shader data structure.
Definition Visualizer.h:90
+
Shader::useShader
void useShader() const
Set shader as current.
Definition Visualizer.cpp:4326
+
Shader::setLightingModel
void setLightingModel(uint lightingmodel) const
Set the lighting model.
Definition Visualizer.cpp:4318
+
Shader::setDepthBiasMatrix
void setDepthBiasMatrix(const glm::mat4 &matrix) const
Set the depth bias matrix for shadows.
Definition Visualizer.cpp:4310
+
Shader::initialize
void initialize(const char *vertex_shader_file, const char *fragment_shader_file)
Initialize the shader.
Definition Visualizer.cpp:3931
+
Shader::setLightDirection
void setLightDirection(const helios::vec3 &direction) const
Set the direction of the light (sun)
Definition Visualizer.cpp:4314
+
Shader::enableTextureMasks
void enableTextureMasks() const
Enable texture masks and color fragments by interpolating vertex colors.
Definition Visualizer.cpp:4291
+
Shader::disableTextures
void disableTextures() const
Disable texture maps and color fragments by interpolating vertex colors.
Definition Visualizer.cpp:4087
+
Shader::setTextureMask
void setTextureMask(const Glyph *glyph, uint &textureID)
Set fragment opacity using a Glyph (red channel)
Definition Visualizer.cpp:4187
+
Shader::enableTextureMaps
void enableTextureMaps() const
Enable texture maps and color fragments using an RGB texture map.
Definition Visualizer.cpp:4171
+
Shader::setTextureMap
void setTextureMap(const char *texture_file, uint &textureID, helios::int2 &texture_size)
Color fragments using an RGB texture map.
Definition Visualizer.cpp:4092
+
Shader::setLightIntensity
void setLightIntensity(float lightintensity) const
Set the intensity of the light source.
Definition Visualizer.cpp:4322
+
Shader::setTransformationMatrix
void setTransformationMatrix(const glm::mat4 &matrix) const
Set the shader transformation matrix, i.e., the Affine transformation applied to all vertices.
Definition Visualizer.cpp:4306
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_visualizer_doc.html b/doc/html/_visualizer_doc.html index 2deb2421e..6942206a8 100644 --- a/doc/html/_visualizer_doc.html +++ b/doc/html/_visualizer_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Visualizer Plugin Documentation
+
Visualizer Plugin Documentation

Table of Contents

-
@@ -142,13 +203,13 @@

Package
-td
+
-td
+
-td + X11/xorg
$ brew install Caskroom/cask/xquartz
Debian/Ubuntu:
$ sudo apt-get install libx11-dev xorg-dev libgl1-mesa-dev libglu1-mesa-dev libxrandr-dev
None (if using Visual Studio) @@ -172,11 +233,14 @@

Visualizer( uint Wdisplay, uint Hdisplay )

The class associated with the visualization is called Visualizer. The class constructor takes one or two arguments that specifies the size of the graphics window. If only one argument is provided (see Visualizer( uint Wdisplay )), the argument is an integer that specifies the width of the diplay window in pixels, with the hight of the window specified according to the default aspect ratio. If two arguments are provided (see Visualizer( uint Wdisplay, uint Hdisplay )), the two arguments correspond respectively to the width and height of the display window in pixels. Below is an example program:

-
 #include "Visualizer.h"
-
-  int main( void ){
-      Visualizer vis( 1200 ); //Opens a graphics window of width 1200 pixels with default aspect ratio
-  }

+
#include "Visualizer.h"
+
+
int main(){
+
Visualizer vis( 1200 ); //Opens a graphics window of width 1200 pixels with default aspect ratio
+
}
+ +
Visualizer
Class for visualization of simulation results.
Definition Visualizer.h:275
+

Using the Visualizer Plug-in

Coordinate Systems

@@ -200,22 +264,24 @@

If plotUpdate() is issued, another command printWindow() can be used to output the current visualization to file (JPEG files only).

The current window can be closed using the closeWindow() command.

Below is an example of opening a window (blank), exporting its contents to file, then closing the window:

-
 #include "Visualizer.h"
-
-   int main( void ){
-      Visualizer vis( 1200 );
-      vis.plotUpdate(); //we have not added geometry, so window is blank
-      vis.printWindow("blank_window.jpg");
-      vis.closeWindow();
-    }

+
#include "Visualizer.h"
+
+
int main(){
+
Visualizer vis( 1200 );
+
vis.plotUpdate(); //we have not added geometry, so window is blank
+
vis.printWindow("blank_window.jpg");
+
vis.closeWindow();
+
}
+

Window background

The window background can be set to a constant color via the command setBackgroundColor( RGBcolor color ). Alternatively, a three-dimensional ‘sky’ background can be set using the addSkyDomeByCenter command. This adds a hemispherical dome with a sky texture image mapped to its surface. The default sky texture is ‘SkyDome_clouds.jpg’ located in the plugins/visualizer/textures directory. The following example shows how to add a sky dome:

-
 #include "Visualizer.h"
-
-   int main( void ){
-      Visualizer vis( 1200 );
-      vis.addSkyDomeByCenter( 100, make_vec3(0,0,0), 20, "plugins/visualizer/textures/SkyDome_clouds.jpg", 0 );
-   }

In the example, we have created a sky dome with a radius of 100 centered at the origin (0,0,0), 20 divisions in the spherical coordinate directions (elevation,azimuth), and on layer 0.

+
#include "Visualizer.h"
+
+
int main(){
+
Visualizer vis( 1200 );
+
vis.addSkyDomeByCenter( 100, make_vec3(0,0,0), 20, "plugins/visualizer/textures/SkyDome_clouds.jpg", 0 );
+
}
+

In the example, we have created a sky dome with a radius of 100 centered at the origin (0,0,0), 20 divisions in the spherical coordinate directions (elevation,azimuth), and on layer 0.

Adding Geometry

Next, we will learn how to add objects to the visualization. The visualizer supports the following objects:

@@ -297,18 +363,20 @@


-

Each object can be added by calling one of the associated functions listed in the table above. The syntax is usually fairly similar to how gometry is added in the Helios context, except that you must specify a coordinate system (see Coordinate Systems).

+

Each object can be added by calling one of the associated functions listed in the table above. The syntax is usually fairly similar to how gometry is added in the Helios context, except that you must specify a coordinate system (see Coordinate Systems).

The code sample below gives an example of how to add a horizontal rectangle to the visualizer by providing the coordinates of its center:

-
 #include "Visualizer.h"
-
-   int main( void ){
-      Visualizer vis( 1200 );
-
-      vec3 center = make_vec3(0,0,0);
-      vec2 size = make_vec2(1,1);
-      SphericalCoord rotation = make_SphericalCoord(0,0);
-      vis.addRectangleByCenter(center,size,rotation,RGB::red,Visualizer::COORDINATES_CARTESIAN);
-   }

+
#include "Visualizer.h"
+
+
int main(){
+
Visualizer vis( 1200 );
+
+
vec3 center = make_vec3(0,0,0);
+
vec2 size = make_vec2(1,1);
+
SphericalCoord rotation = make_SphericalCoord(0,0);
+
vis.addRectangleByCenter(center, size, rotation, RGB::red, Visualizer::COORDINATES_CARTESIAN);
+
}
+
Visualizer::COORDINATES_CARTESIAN
@ COORDINATES_CARTESIAN
Coordinates are specified in a 3D Cartesian system (right-handed), where +z is vertical.
Definition Visualizer.h:326
+

Automatically importing Context geometry

The visualizer can automatically import some or all geometry from the Context. This is accomplished using the buildContextGeometry command. To add all primitives in the Context, the buildContextGeometry command would be issued, which is passed the Context. We can add a subset of the Context geometry through an additional argument which takes a vector of UUID's.

@@ -320,47 +388,66 @@

buildContextGeometry( Context* context, std::vector<uint> UUIDs ) Add a subset of primitives in the Context to the Visualizer.

The example below shows how to add all Context geometry to the visualizer.

-
 #include "Context.h"
-   #include "Visualizer.h"
-
-   using namespace helios;
-
-   int main( void ){
-      Context context;
-
-      vec3 center = make_vec3(0,0,0);
-      vec2 size = make_vec2(1,1);
-      context.addPatch(center,size);
-
-      Visualizer vis( 1200 );
-
-      vis.buildContextGeometry(&context);
-   }

+
#include "Context.h"
+
#include "Visualizer.h"
+
+
using namespace helios;
+
+
int main(){
+
Context context;
+
+
vec3 center = make_vec3(0,0,0);
+
vec2 size = make_vec2(1,1);
+
context.addPatch(center,size);
+
+
Visualizer vis( 1200 );
+
+
vis.buildContextGeometry(&context);
+
}
+ +
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+

Plotting Geometry

To this point, we have not actually plotted anything in the Visualizer window. A final command is neede to display all of the geometry added to the Visualizer in the window we have opened. There are two functions for doing this, which are detailed below.

plotInteractive()

The plotInteractive() function can be used to generate an interactive plot of the geometry in the Visualizer. This means that the code will pause to produce the plot/visualization until the window is closed by the user. The user can interact with the plot by issuing keystrokes to, e.g., zoom. An example is given below to generate an interactive plot.

-
 #include "Context.h"
-   #include "Visualizer.h"
-
-   using namespace helios;
-
-   int main( void ){
-      Context context;
-
-      vec3 center = make_vec3(0,0,0);
-      vec2 size = make_vec2(1,1);
-      context.addRectangleByCenter(center,size);
-
-      Visualizer vis( 1200 );
-
-      vis.buildContextGeometry(&context);
-
-      vis.plotInteractive();
-   }

+
#include "Context.h"
+
#include "Visualizer.h"
+
+
using namespace helios;
+
+
int main(){
+
Context context;
+
+
vec3 center = make_vec3(0,0,0);
+
vec2 size = make_vec2(1,1);
+
context.addRectangleByCenter(center,size);
+
+
Visualizer vis( 1200 );
+
+
vis.buildContextGeometry(&context);
+
+
vis.plotInteractive();
+
}
+

View Controls

-

In an interactive plot, the view can be modified via various keystrokes, which are detailed in the table below.

+

In an interactive plot, the view can be modified via the mouse or keyboard. Note that for very large scenes, mouse-based controls may be laggy.

+

Mouse camera controls are given by:

+ + + + + + + + + +
Mouse Button Action
scroll wheel zoom in/out relative to look-at position
left mouse button (+drag) rotate camera view about look-at position
right mouse button (+drag) move look-at position
+

Keyboard camera controls are given by:

@@ -384,26 +471,27 @@

plotUpdate()

The plotUpdate() function simply updates the plot window based on current geometry, and continues on to the next lines of code. This can be useful if only a still image is to be written to file, as illustrated below.

-
 #include "Context.h"
-   #include "Visualizer.h"
-
-   using namespace helios;
-
-   int main( void ){
-      Context context;
-
-      vec3 center = make_vec3(0,0,0);
-      vec2 size = make_vec2(1,1);
-      context.addPatch(center,size);
-
-      Visualizer vis( 1200 );
-
-      vis.buildContextGeometry(&context);
-
-      vis.plotUpdate();
-      vis.printWindow("rectangle.jpg");
-      vis.closeWindow();
-   }

+
#include "Context.h"
+
#include "Visualizer.h"
+
+
using namespace helios;
+
+
int main(){
+
Context context;
+
+
vec3 center = make_vec3(0,0,0);
+
vec2 size = make_vec2(1,1);
+
context.addPatch(center,size);
+
+
Visualizer vis( 1200 );
+
+
vis.buildContextGeometry(&context);
+
+
vis.plotUpdate();
+
vis.printWindow("rectangle.jpg");
+
vis.closeWindow();
+
}
+

Colors and Shading

Coloring by r-g-b code

@@ -424,37 +512,39 @@

+ + + + + +
Key Action
Visualizer::COLORMAP_HOT
-td
Visualizer::COLORMAP_COOL
-td
Visualizer::COLORMAP_RAINBOW
-td
Visualizer::COLORMAP_LAVA
-td
Visualizer::COLORMAP_PARULA
-td
Visualizer::COLORMAP_GRAY
-td
Visualizer::COLORMAP_CUSTOM N/A

The colormap to be used is set using the following command setColormap( Ctable colormap_name ), where ‘colormap_name’ is one of the enumerations in the table above. For example, to set the ‘hot’ colormap one would use:

-
 vis.setColormap( Visualizer::COLORMAP_HOT );

To set a custom color table, the same command is used with the Visualizer::COLORMAP_CUSTOM argument, plus additional arguments that define the custom color table. These arguments are 1) a vector of r-g-b colors defining various colors in the color table, and 2) a vector of values between 0 and 1 defining the relative positions of the colors in the table. The first position value must always be 0, and the last value must be 1. The visualizer interpolates between colors to populate the full color table. The table below shows how the ‘hot’ color table is defined:

+
vis.setColormap( Visualizer::COLORMAP_HOT );
+
Visualizer::COLORMAP_HOT
@ COLORMAP_HOT
"Hot" colormap
Definition Visualizer.h:333
+

To set a custom color table, the same command is used with the Visualizer::COLORMAP_CUSTOM argument, plus additional arguments that define the custom color table. These arguments are 1) a vector of r-g-b colors defining various colors in the color table, and 2) a vector of values between 0 and 1 defining the relative positions of the colors in the table. The first position value must always be 0, and the last value must be 1. The visualizer interpolates between colors to populate the full color table. The table below shows how the ‘hot’ color table is defined:

@@ -470,23 +560,25 @@

RGBcolor relative position
(1, 1, 0)
1

Example code on how to implement the color table creation is given below:

-
 Visualizer vis(1000);
-
-   std::vector<RGBcolor> ctable_colors;
-   ctable_colors.push_back( make_RGBcolor( 0.f, 0.f, 0.f ) );
-   ctable_colors.push_back( make_RGBcolor( 0.5f, 0.f, 0.5f ) );
-   ctable_colors.push_back( make_RGBcolor( 1.f, 0.f, 0.f ) );
-   ctable_colors.push_back( make_RGBcolor( 1.f, 0.5f, 0.f ) );
-   ctable_colors.push_back( make_RGBcolor( 1.f, 1.f, 0.f ) );
-
-   std::vector<float> ctable_positions;
-   ctable_positions.push_back( 0.f );
-   ctable_positions.push_back( 0.25f );
-   ctable_positions.push_back( 0.5f );
-   ctable_positions.push_back( 0.75f );
-   ctable_positions.push_back( 1.f );
-
-   vis.setColormap( Visualizer::COLORMAP_CUSTOM, ctable_colors, ctable_positions );

+
Visualizer vis(1000);
+
+
std::vector<RGBcolor> ctable_colors;
+
ctable_colors.push_back( make_RGBcolor( 0.f, 0.f, 0.f ) );
+
ctable_colors.push_back( make_RGBcolor( 0.5f, 0.f, 0.5f ) );
+
ctable_colors.push_back( make_RGBcolor( 1.f, 0.f, 0.f ) );
+
ctable_colors.push_back( make_RGBcolor( 1.f, 0.5f, 0.f ) );
+
ctable_colors.push_back( make_RGBcolor( 1.f, 1.f, 0.f ) );
+
+
std::vector<float> ctable_positions;
+
ctable_positions.push_back( 0.f );
+
ctable_positions.push_back( 0.25f );
+
ctable_positions.push_back( 0.5f );
+
ctable_positions.push_back( 0.75f );
+
ctable_positions.push_back( 1.f );
+
+
vis.setColormap( Visualizer::COLORMAP_CUSTOM, ctable_colors, ctable_positions );
+
Visualizer::COLORMAP_CUSTOM
@ COLORMAP_CUSTOM
Custom colormap.
Definition Visualizer.h:345
+

Colorbar

The colorbar is the legend showing how values are mapped to the color table. The table below gives functions for customizing colorbar behavior, including for example its position, size, and visibility.

@@ -503,7 +595,7 @@

- + @@ -528,21 +620,24 @@

setColorbarRange( float cmin, float cmax ) Set the range of data values for the colorbar/colormap.
setColorbarTicks( std::vector<float> ticks ) Set locations of data tick along colorbar.
setColorbarTicks( const std::vector<float> &ticks ) Set locations of data tick along colorbar.
setColorbarTitle( const char* title ) Set the title text displayed above the colorbar.
Phong shading model with shadows. Visualizer::LIGHTING_PHONG_SHADOWED

If the Phong shading model is used, the position of the light source should be specified. This is accomplished through the Visualizer::setLightDirection( vec3 direction ) command, which takes a unit vector pointing toward the light source. The example below shows how to enable the Phong lighting model with shadows, with the light position set according to the position of the sun.

-
 #include "Visualizer.h"
-
-   int main( void ){
-      Visualizer vis( 1200 );
-
-      vec3 center = make_vec3(0,0,0);
-      vec2 size = make_vec2(1,1);
-      SphericalCoord rotation = make_SphericalCoord(0,0);
-      vis.addRectangleByCenter(center,size,rotation,RGB::red,Visualizer::COORDINATES_CARTESIAN,0);
-
-      vec3 light_direction = make_vec3(1,1,1);
-
-      vis.setLightingModel( Visualizer::LIGHTING_PHONG_SHADOWED );
-      vis.setLightDirection( light_direction );
-   }

+
#include "Visualizer.h"
+
+
int main(){
+
Visualizer vis( 1200 );
+
+
vec3 center = make_vec3(0,0,0);
+
vec2 size = make_vec2(1,1);
+
SphericalCoord rotation = make_SphericalCoord(0,0);
+
vis.addRectangleByCenter(center,size,rotation,RGB::red,Visualizer::COORDINATES_CARTESIAN,0);
+
+
vec3 light_direction = make_vec3(1,1,1);
+
+
vis.setLightingModel( Visualizer::LIGHTING_PHONG_SHADOWED );
+
vis.setLightDirection( light_direction );
+
}
+
Visualizer::LIGHTING_PHONG_SHADOWED
@ LIGHTING_PHONG_SHADOWED
Phong lighting model plus shadowing is applied to add shading effects to the diffuse color.
Definition Visualizer.h:390
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+

View Options

The default camera position is at an elevation angle of 20 degrees and to the North, with the camera looking toward the origin. The distance of the camera from the origin is automatically adjusted to fit all primitives in view.

There are multiple ways of specifying custom camera views. One method involves specifying the (x,y,z) position of the camera, and the (x,y,z) position that the camera is looking at. This is accomplished using the command setCameraPosition( vec3 cameraPosition, vec3 lookAt ).

@@ -563,7 +658,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_voxel_intersection_8cpp.html b/doc/html/_voxel_intersection_8cpp.html index 270ea26d6..16d25403b 100644 --- a/doc/html/_voxel_intersection_8cpp.html +++ b/doc/html/_voxel_intersection_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +

+
VoxelIntersection.cpp File Reference
@@ -105,7 +117,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_voxel_intersection_8cpp_source.html b/doc/html/_voxel_intersection_8cpp_source.html index ffa59f12d..0270d9d3f 100644 --- a/doc/html/_voxel_intersection_8cpp_source.html +++ b/doc/html/_voxel_intersection_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
VoxelIntersection.cpp
@@ -97,6 +109,7 @@
17
18using namespace helios;
19
+
20VoxelIntersection::VoxelIntersection( helios::Context* __context ){
21
22 context = __context;
@@ -104,7 +117,9 @@
24 printmessages=true;
25
26}
+
27
+
28int VoxelIntersection::selfTest( void ){
29
30 if( printmessages ){
@@ -537,8 +552,10 @@
466
467
468}
+
469
470// find the intersection point of two lines
+
471helios::vec3 VoxelIntersection::linesIntersection(helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction){
472
473 helios::vec3 g = line2_point-line1_point;
@@ -559,7 +576,9 @@
488 return line1_point - rht ;
489 }
490}
+
491
+
492std::vector<uint> VoxelIntersection::slicePrimitive(uint UUID, std::vector<helios::vec3> voxel_face_vertices)
493{
494
@@ -1773,7 +1792,9 @@
1705
1706 return resulting_UUIDs;
1707}
+
1708
+
1709std::vector<uint> VoxelIntersection::slicePrimitivesUsingGrid(std::vector<uint> UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
1710{
1711
@@ -2022,25 +2043,33 @@
1958 return UUIDs_out;
1959
1960}
+
1961
1962
+
1963std::vector<std::vector<uint>> VoxelIntersection::getCellPrimitives(void){
1964
1965 return cell_primitives;
1966
1967}
+
1968
+
1969bool VoxelIntersection::approxSame(float a, float b, float absTol, float relTol){
1970
1971 return fabs(a-b) <= absTol || fabs(a-b) <= relTol*(std::max(fabs(a), fabs(b)));
1972
1973}
+
1974
+
1975bool VoxelIntersection::approxSame(helios::vec3 a, helios::vec3 b, float absTol)
1976{
1977 return fabs(a.x-b.x) <= absTol && fabs(a.y-b.y) <= absTol && fabs(a.z-b.z) <= absTol ;
1978}
+
1979
+
1980helios::vec2 VoxelIntersection::interpolate_texture_UV_to_slice_point(helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
1981{
1982 // uv coordinate that will be output
@@ -2129,67 +2158,69 @@
2065 return uvs;
2066
2067}
-
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition: Context.h:130
+
+
helios::OBJECT_TYPE_TILE
@ OBJECT_TYPE_TILE
< Tile
Definition Context.h:130
- -
VoxelIntersection::slicePrimitivesUsingGrid
std::vector< uint > slicePrimitivesUsingGrid(std::vector< uint > UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
Slice a primitives based on a defined grid of voxels.
Definition: VoxelIntersection.cpp:1709
-
VoxelIntersection::calculatePrimitiveVoxelIntersection
void calculatePrimitiveVoxelIntersection(void)
Calculate primitives that reside in all voxels for every primitive in the Context.
Definition: VoxelIntersection.cu:220
-
VoxelIntersection::slicePrimitive
std::vector< uint > slicePrimitive(uint UUID, std::vector< helios::vec3 > voxel_face_vertices)
Slice a primitive (patch or triangle) into multiple triangles using a defined plane (often a voxel fa...
Definition: VoxelIntersection.cpp:492
-
VoxelIntersection::selfTest
int selfTest(void)
Self-test function (unit tests)
Definition: VoxelIntersection.cpp:28
-
VoxelIntersection::VoxelIntersection
VoxelIntersection(helios::Context *context)
Default constructor.
Definition: VoxelIntersection.cpp:20
-
VoxelIntersection::linesIntersection
helios::vec3 linesIntersection(helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction)
Calculate the intersection point of two lines.
Definition: VoxelIntersection.cpp:471
-
VoxelIntersection::approxSame
bool approxSame(float a, float b, float absTol, float relTol)
compare two floating point numbers to within an absolute and relative error tolerance
Definition: VoxelIntersection.cpp:1969
-
VoxelIntersection::getCellPrimitives
std::vector< std::vector< uint > > getCellPrimitives()
get 2D vector storing the UUIDs within each grid cell
Definition: VoxelIntersection.cpp:1963
-
VoxelIntersection::disableMessages
void disableMessages()
Disable output messages (enabled by default)
Definition: VoxelIntersection.cu:212
-
VoxelIntersection::interpolate_texture_UV_to_slice_point
helios::vec2 interpolate_texture_UV_to_slice_point(helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
find the uv coordinate of a slice point
Definition: VoxelIntersection.cpp:1980
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition: Context_data.cpp:1192
-
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition: Context.cpp:7053
-
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition: Context_data.cpp:1001
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:7017
-
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition: Context.cpp:7135
-
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition: Context.cpp:7159
-
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition: Context.cpp:7175
-
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition: Context.cpp:6988
-
helios::Context::getObjectType
helios::ObjectType getObjectType(uint ObjID) const
Get an enumeration specifying the type of the object.
Definition: Context.cpp:2940
-
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition: Context.cpp:7197
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition: Context.cpp:7217
-
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition: Context.cpp:7104
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition: Context.cpp:1659
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::Context::cropDomain
void cropDomain(std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
Crop specified UUIDs such that they lie within some specified axis-aligned box.
Definition: Context.cpp:2213
-
helios::Context::sumPrimitiveSurfaceArea
float sumPrimitiveSurfaceArea(const std::vector< uint > &UUIDs) const
Sum the one-sided surface area of a group of primitives.
Definition: Context_data.cpp:2267
-
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition: global.cpp:223
-
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition: global.cpp:1100
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition: Context.cpp:1372
-
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition: Context.cpp:1212
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::int3::x
int x
First element in vector.
Definition: helios_vector_types.h:150
-
helios::int3::z
int z
Third element in vector.
Definition: helios_vector_types.h:154
-
helios::int3::y
int y
Second element in vector.
Definition: helios_vector_types.h:152
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+ +
VoxelIntersection::slicePrimitivesUsingGrid
std::vector< uint > slicePrimitivesUsingGrid(std::vector< uint > UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
Slice a primitives based on a defined grid of voxels.
Definition VoxelIntersection.cpp:1709
+
VoxelIntersection::calculatePrimitiveVoxelIntersection
void calculatePrimitiveVoxelIntersection(void)
Calculate primitives that reside in all voxels for every primitive in the Context.
Definition VoxelIntersection.cu:220
+
VoxelIntersection::slicePrimitive
std::vector< uint > slicePrimitive(uint UUID, std::vector< helios::vec3 > voxel_face_vertices)
Slice a primitive (patch or triangle) into multiple triangles using a defined plane (often a voxel fa...
Definition VoxelIntersection.cpp:492
+
VoxelIntersection::selfTest
int selfTest(void)
Self-test function (unit tests)
Definition VoxelIntersection.cpp:28
+
VoxelIntersection::VoxelIntersection
VoxelIntersection(helios::Context *context)
Default constructor.
Definition VoxelIntersection.cpp:20
+
VoxelIntersection::linesIntersection
helios::vec3 linesIntersection(helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction)
Calculate the intersection point of two lines.
Definition VoxelIntersection.cpp:471
+
VoxelIntersection::approxSame
bool approxSame(float a, float b, float absTol, float relTol)
compare two floating point numbers to within an absolute and relative error tolerance
Definition VoxelIntersection.cpp:1969
+
VoxelIntersection::getCellPrimitives
std::vector< std::vector< uint > > getCellPrimitives()
get 2D vector storing the UUIDs within each grid cell
Definition VoxelIntersection.cpp:1963
+
VoxelIntersection::disableMessages
void disableMessages()
Disable output messages (enabled by default)
Definition VoxelIntersection.cu:212
+
VoxelIntersection::interpolate_texture_UV_to_slice_point
helios::vec2 interpolate_texture_UV_to_slice_point(helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
find the uv coordinate of a slice point
Definition VoxelIntersection.cpp:1980
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::copyPrimitiveData
void copyPrimitiveData(uint sourceUUID, uint destinationUUID)
copy all primitive data from one primitive to another
Definition Context_data.cpp:1192
+
helios::Context::getPrimitiveArea
float getPrimitiveArea(uint UUID) const
Method to return the surface area of a Primitive.
Definition Context.cpp:7053
+
helios::Context::getPrimitiveData
void getPrimitiveData(uint UUID, const char *label, int &data) const
Get data associated with a primitive element.
Definition Context_data.cpp:1001
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::getPrimitiveParentObjectID
uint getPrimitiveParentObjectID(uint UUID) const
Method to return the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:7017
+
helios::Context::getPrimitiveColorRGBA
helios::RGBAcolor getPrimitiveColorRGBA(uint UUID) const
Method to return the diffuse color of a Primitive with transparency.
Definition Context.cpp:7135
+
helios::Context::getPrimitiveTextureFile
std::string getPrimitiveTextureFile(uint UUID) const
Get the path to texture map file for primitive. If primitive does not have a texture map,...
Definition Context.cpp:7159
+
helios::Context::getPrimitiveTextureUV
std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
Get u-v texture coordinates at primitive vertices.
Definition Context.cpp:7175
+
helios::Context::setPrimitiveParentObjectID
void setPrimitiveParentObjectID(uint UUID, uint objID)
Method to set the ID of the parent object the primitive belongs to (default is object 0)
Definition Context.cpp:6988
+
helios::Context::getObjectType
helios::ObjectType getObjectType(uint ObjID) const
Get an enumeration specifying the type of the object.
Definition Context.cpp:2940
+
helios::Context::overridePrimitiveTextureColor
void overridePrimitiveTextureColor(uint UUID)
Override the color in the texture map for all primitives in the Compound Object, in which case the pr...
Definition Context.cpp:7197
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::isPrimitiveTextureColorOverridden
bool isPrimitiveTextureColorOverridden(uint UUID) const
Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
Definition Context.cpp:7217
+
helios::Context::getPrimitiveNormal
helios::vec3 getPrimitiveNormal(uint UUID) const
Method to return the normal vector of a Primitive.
Definition Context.cpp:7104
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::doesPrimitiveExist
bool doesPrimitiveExist(uint UUID) const
Check if primitive exists for a given UUID.
Definition Context.cpp:1659
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::Context::cropDomain
void cropDomain(std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
Crop specified UUIDs such that they lie within some specified axis-aligned box.
Definition Context.cpp:2213
+
helios::Context::sumPrimitiveSurfaceArea
float sumPrimitiveSurfaceArea(const std::vector< uint > &UUIDs) const
Sum the one-sided surface area of a group of primitives.
Definition Context_data.cpp:2267
+
helios::randu
float randu()
Random number from a uniform distribution between 0 and 1.
Definition global.cpp:223
+
helios::min
float min(const std::vector< float > &vect)
Minimum value of a vector of floats.
Definition global.cpp:1100
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::Context::addVoxel
uint addVoxel(const helios::vec3 &center, const helios::vec3 &size)
Add new Voxel geometric primitive.
Definition Context.cpp:1372
+
helios::Context::addPatch
uint addPatch()
Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
Definition Context.cpp:1212
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::int3::x
int x
First element in vector.
Definition helios_vector_types.h:150
+
helios::int3::z
int z
Third element in vector.
Definition helios_vector_types.h:154
+
helios::int3::y
int y
Second element in vector.
Definition helios_vector_types.h:152
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_voxel_intersection_8cu.html b/doc/html/_voxel_intersection_8cu.html index 32d01ff76..274228341 100644 --- a/doc/html/_voxel_intersection_8cu.html +++ b/doc/html/_voxel_intersection_8cu.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Macros | @@ -101,20 +113,20 @@ - +

Macros

#define CUDA_CHECK_ERROR(ans)   { gpuAssert((ans), __FILE__, __LINE__); }
#define CUDA_CHECK_ERROR(ans)
 
- + - + - + - + - +

Functions

void gpuAssert (cudaError_t code, const char *file, int line, bool abort=true)
void gpuAssert (cudaError_t code, const char *file, int line, bool abort=true)
 
float3 vec3tofloat3 (helios::vec3 v3)
float3 vec3tofloat3 (helios::vec3 v3)
 
helios::vec3 float3tovec3 (float3 f3)
helios::vec3 float3tovec3 (float3 f3)
 
__device__ float3 d_rotatePoint_vi (const float3 &position, const float &theta, const float &phi)
__device__ float3 d_rotatePoint_vi (const float3 &position, const float &theta, const float &phi)
 
__global__ void insideVolume_vi (const uint Nhits, const float3 *d_hit_xyz, const uint Ngridcells, const float3 *d_grid_size, const float3 *d_grid_center, const float *d_grid_rotation, int *d_hit_vol)
__global__ void insideVolume_vi (const uint Nhits, const float3 *d_hit_xyz, const uint Ngridcells, const float3 *d_grid_size, const float3 *d_grid_center, const float *d_grid_rotation, int *d_hit_vol)
 

Detailed Description

@@ -134,13 +146,13 @@

#define CUDA_CHECK_ERROR ( -   - ans) -    { gpuAssert((ans), __FILE__, __LINE__); } + ans) +

- +Value:
{ gpuAssert((ans), __FILE__, __LINE__); }
+

Definition at line 20 of file VoxelIntersection.cu.

@@ -155,25 +167,17 @@

__device__ float3 d_rotatePoint_vi ( - const float3 &  - position, + const float3 & position, - const float &  - theta, + const float & theta, - const float &  - phi  - - - - ) - + const float & phi )

@@ -194,8 +198,7 @@

helios::vec3 float3tovec3 ( - float3  - f3) + float3 f3) @@ -222,31 +225,22 @@

void gpuAssert ( - cudaError_t  - code, + cudaError_t code, - const char *  - file, + const char * file, - int  - line, + int line, - bool  - abort = true  - - - - ) - + bool abort = true ) @@ -269,49 +263,37 @@

__global__ void insideVolume_vi ( - const uint  - Nhits, + const uint Nhits, - const float3 *  - d_hit_xyz, + const float3 * d_hit_xyz, - const uint  - Ngridcells, + const uint Ngridcells, - const float3 *  - d_grid_size, + const float3 * d_grid_size, - const float3 *  - d_grid_center, + const float3 * d_grid_center, - const float *  - d_grid_rotation, + const float * d_grid_rotation, - int *  - d_hit_vol  - - - - ) - + int * d_hit_vol )

@@ -332,8 +314,7 @@

float3 vec3tofloat3 ( - helios::vec3  - v3) + helios::vec3 v3) @@ -351,7 +332,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/_voxel_intersection_8cu_source.html b/doc/html/_voxel_intersection_8cu_source.html index 20f6ab9c3..adc4e67a6 100644 --- a/doc/html/_voxel_intersection_8cu_source.html +++ b/doc/html/_voxel_intersection_8cu_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
VoxelIntersection.cu
@@ -289,18 +301,25 @@
209
210}
211
+
212void VoxelIntersection::disableMessages( void ){
213 printmessages=false;
214}
+
215
+
216void VoxelIntersection::enableMessages( void ){
217 printmessages=true;
218}
+
219
+
223
+
224void VoxelIntersection::calculatePrimitiveVoxelIntersection( std::vector<uint> UUIDs ){
225
226 if( printmessages ){
@@ -439,27 +458,29 @@
359 }
360
361}
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
-
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition: Context.h:31
-
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition: Context.h:37
+
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
+
helios::PrimitiveType
PrimitiveType
Type of primitive element.
Definition Context.h:31
+
helios::PRIMITIVE_TYPE_VOXEL
@ PRIMITIVE_TYPE_VOXEL
Rectangular prism primitive.
Definition Context.h:37
-
VoxelIntersection::calculatePrimitiveVoxelIntersection
void calculatePrimitiveVoxelIntersection(void)
Calculate primitives that reside in all voxels for every primitive in the Context.
Definition: VoxelIntersection.cu:220
-
VoxelIntersection::enableMessages
void enableMessages()
Re-enable output messages.
Definition: VoxelIntersection.cu:216
-
VoxelIntersection::disableMessages
void disableMessages()
Disable output messages (enabled by default)
Definition: VoxelIntersection.cu:212
-
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition: Context.cpp:6984
-
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition: Context.cpp:1741
-
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition: Context.cpp:1763
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition: Context.cpp:1750
-
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition: Context.cpp:7122
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
VoxelIntersection::calculatePrimitiveVoxelIntersection
void calculatePrimitiveVoxelIntersection(void)
Calculate primitives that reside in all voxels for every primitive in the Context.
Definition VoxelIntersection.cu:220
+
VoxelIntersection::enableMessages
void enableMessages()
Re-enable output messages.
Definition VoxelIntersection.cu:216
+
VoxelIntersection::disableMessages
void disableMessages()
Disable output messages (enabled by default)
Definition VoxelIntersection.cu:212
+
helios::Context::getPrimitiveType
PrimitiveType getPrimitiveType(uint UUID) const
Method to get the Primitive type.
Definition Context.cpp:6984
+
helios::Context::getVoxelSize
helios::vec3 getVoxelSize(uint UUID) const
Get the size of a voxel element.
Definition Context.cpp:1741
+
helios::Context::getAllUUIDs
std::vector< uint > getAllUUIDs() const
Get all primitive UUIDs currently in the Context.
Definition Context.cpp:1763
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::getVoxelCenter
helios::vec3 getVoxelCenter(uint UUID) const
Get the Cartesian (x,y,z) center position of a voxel element.
Definition Context.cpp:1750
+
helios::Context::getPrimitiveVertices
std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
Method to return the (x,y,z) coordinates of the vertices of a Primitive.
Definition Context.cpp:7122
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_voxel_intersection_8h.html b/doc/html/_voxel_intersection_8h.html index 61d4e72d8..65cf3971b 100644 --- a/doc/html/_voxel_intersection_8h.html +++ b/doc/html/_voxel_intersection_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
Data Structures
@@ -113,7 +125,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_voxel_intersection_8h_source.html b/doc/html/_voxel_intersection_8h_source.html index 77aaac580..cde26eef8 100644 --- a/doc/html/_voxel_intersection_8h_source.html +++ b/doc/html/_voxel_intersection_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
VoxelIntersection.h
@@ -98,11 +110,12 @@
18
19#include "Context.h"
20
+
21class VoxelIntersection{
22 public:
23
25
-
28 VoxelIntersection( helios::Context* context );
+
28 VoxelIntersection( helios::Context* context );
29
31 int selfTest( void );
32
@@ -145,28 +158,31 @@
120 std::vector<std::vector<uint>> cell_primitives;
121
122};
+
123
124#endif
- -
VoxelIntersection::slicePrimitivesUsingGrid
std::vector< uint > slicePrimitivesUsingGrid(std::vector< uint > UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
Slice a primitives based on a defined grid of voxels.
Definition: VoxelIntersection.cpp:1709
-
VoxelIntersection::calculatePrimitiveVoxelIntersection
void calculatePrimitiveVoxelIntersection(void)
Calculate primitives that reside in all voxels for every primitive in the Context.
Definition: VoxelIntersection.cu:220
-
VoxelIntersection::enableMessages
void enableMessages()
Re-enable output messages.
Definition: VoxelIntersection.cu:216
-
VoxelIntersection::slicePrimitive
std::vector< uint > slicePrimitive(uint UUID, std::vector< helios::vec3 > voxel_face_vertices)
Slice a primitive (patch or triangle) into multiple triangles using a defined plane (often a voxel fa...
Definition: VoxelIntersection.cpp:492
-
VoxelIntersection::selfTest
int selfTest(void)
Self-test function (unit tests)
Definition: VoxelIntersection.cpp:28
-
VoxelIntersection::linesIntersection
helios::vec3 linesIntersection(helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction)
Calculate the intersection point of two lines.
Definition: VoxelIntersection.cpp:471
-
VoxelIntersection::approxSame
bool approxSame(float a, float b, float absTol, float relTol)
compare two floating point numbers to within an absolute and relative error tolerance
Definition: VoxelIntersection.cpp:1969
-
VoxelIntersection::getCellPrimitives
std::vector< std::vector< uint > > getCellPrimitives()
get 2D vector storing the UUIDs within each grid cell
Definition: VoxelIntersection.cpp:1963
-
VoxelIntersection::disableMessages
void disableMessages()
Disable output messages (enabled by default)
Definition: VoxelIntersection.cu:212
-
VoxelIntersection::interpolate_texture_UV_to_slice_point
helios::vec2 interpolate_texture_UV_to_slice_point(helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
find the uv coordinate of a slice point
Definition: VoxelIntersection.cpp:1980
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::int3
Vector of three elements of type 'int'.
Definition: helios_vector_types.h:146
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
VoxelIntersection::slicePrimitivesUsingGrid
std::vector< uint > slicePrimitivesUsingGrid(std::vector< uint > UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
Slice a primitives based on a defined grid of voxels.
Definition VoxelIntersection.cpp:1709
+
VoxelIntersection::calculatePrimitiveVoxelIntersection
void calculatePrimitiveVoxelIntersection(void)
Calculate primitives that reside in all voxels for every primitive in the Context.
Definition VoxelIntersection.cu:220
+
VoxelIntersection::enableMessages
void enableMessages()
Re-enable output messages.
Definition VoxelIntersection.cu:216
+
VoxelIntersection::slicePrimitive
std::vector< uint > slicePrimitive(uint UUID, std::vector< helios::vec3 > voxel_face_vertices)
Slice a primitive (patch or triangle) into multiple triangles using a defined plane (often a voxel fa...
Definition VoxelIntersection.cpp:492
+
VoxelIntersection::selfTest
int selfTest(void)
Self-test function (unit tests)
Definition VoxelIntersection.cpp:28
+
VoxelIntersection::VoxelIntersection
VoxelIntersection(helios::Context *context)
Default constructor.
Definition VoxelIntersection.cpp:20
+
VoxelIntersection::linesIntersection
helios::vec3 linesIntersection(helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction)
Calculate the intersection point of two lines.
Definition VoxelIntersection.cpp:471
+
VoxelIntersection::approxSame
bool approxSame(float a, float b, float absTol, float relTol)
compare two floating point numbers to within an absolute and relative error tolerance
Definition VoxelIntersection.cpp:1969
+
VoxelIntersection::getCellPrimitives
std::vector< std::vector< uint > > getCellPrimitives()
get 2D vector storing the UUIDs within each grid cell
Definition VoxelIntersection.cpp:1963
+
VoxelIntersection::disableMessages
void disableMessages()
Disable output messages (enabled by default)
Definition VoxelIntersection.cu:212
+
VoxelIntersection::interpolate_texture_UV_to_slice_point
helios::vec2 interpolate_texture_UV_to_slice_point(helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
find the uv coordinate of a slice point
Definition VoxelIntersection.cpp:1980
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::int3
Vector of three elements of type 'int'.
Definition helios_vector_types.h:146
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_voxel_intersection_doc.html b/doc/html/_voxel_intersection_doc.html index ff584f5ca..d478ae963 100644 --- a/doc/html/_voxel_intersection_doc.html +++ b/doc/html/_voxel_intersection_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
-
Voxel Intersection Plugin Documentation
+
Voxel Intersection Plugin Documentation

Table of Contents

-


@@ -126,13 +154,13 @@

Package
-td
+
-td
+
-td + NVIDIA CUDA 9.0+ Mac OSX:
$ brew install Caskroom/cask/cuda
Use CUDA installer Use CUDA installer @@ -265,7 +293,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_weber_penn_doc.html b/doc/html/_weber_penn_doc.html index 962111319..66ff96406 100644 --- a/doc/html/_weber_penn_doc.html +++ b/doc/html/_weber_penn_doc.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +

+
-
Weber-Penn Tree Plugin Documentation
+
Weber-Penn Tree Plugin Documentation

Table of Contents

-
@@ -149,7 +193,7 @@

Using the Weber-Penn Tree Plug-in

The XML Tree Library File

-

The parameters that define various tree geometries are specified in an XML file, which is loaded by the plug-in. When the WeberPennTree constructor is called, the defalut tree library is loaded. A list of trees in the default library is listed in the table below. Default tree parameters can be modified by the user, or custom tree libraries can be added, which is detailed in Section Custom Tree Library Files. An example tree definition is given below. The tree definition is encapsulated by the <WeberPennTree label="...">...</WeberPennTree> tag, where label gives a handle used to reference that specific tree geometry. Other tags define various parameters that determine the structure of the tree, which are detailed in the sections below.

+

The parameters that define various tree geometries are specified in an XML file, which is loaded by the plug-in. When the WeberPennTree constructor is called, the defalut tree library is loaded. A list of trees in the default library is listed in the table below. Default tree parameters can be modified by the user, or custom tree libraries can be added, which is detailed in Section Custom Tree Library Files. An example tree definition is given below. The tree definition is encapsulated by the <WeberPennTree label="...">...</WeberPennTree> tag, where label gives a handle used to reference that specific tree geometry. Other tags define various parameters that determine the structure of the tree, which are detailed in the sections below.

@@ -157,47 +201,47 @@

+ + + + + + + + +
Tree typeSample Image
Almond
-td
Apple
-td
Avocado
-td
Lemon
-td
Olive
-td
Orange
-td
Peach
-td
Pistachio
-td
Walnut
-td 
 <?xml version=1.0?>
 
@@ -324,42 +368,42 @@ 

 0Conical

 
 

-td 
+ 
 
 1Spherical/Ellipsoidal

 
 

-td 
+ 
 
 2Hemispherical

 
 

-td 
+ 
 
 3Cylindrical

 
 

-td 
+ 
 
 4Tapered Cylindrical

 
 

-td 
+ 
 
 5Flame

 
 

-td 
+ 
 
 6Inverse Conical

 
 

-td 
+ 
 
 7Tend Flame

 
 

-td 
+ 
 
 

 Recursive Branches

@@ -439,7 +483,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_weber_penn_tree_8cpp.html b/doc/html/_weber_penn_tree_8cpp.html index 31f35f19e..f5ed21d92 100644 --- a/doc/html/_weber_penn_tree_8cpp.html +++ b/doc/html/_weber_penn_tree_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
WeberPennTree.cpp File Reference
@@ -107,7 +119,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_weber_penn_tree_8cpp_source.html b/doc/html/_weber_penn_tree_8cpp_source.html index a9083134d..07b92c754 100644 --- a/doc/html/_weber_penn_tree_8cpp_source.html +++ b/doc/html/_weber_penn_tree_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
WeberPennTree.cpp
@@ -101,6 +113,7 @@
21
22using namespace helios;
23
+
24WeberPennTree::WeberPennTree( helios::Context* __context ){
25
26 context = __context;
@@ -120,7 +133,9 @@
40 generator.seed(seed);
41
42}
+
43
+
44int WeberPennTree::selfTest( void ){
45
46 std::cout << "Building trees in the default library..." << std::flush;
@@ -157,11 +172,15 @@
77 return 0;
78
79}
+
80
+
81uint WeberPennTree::buildTree( const char* treename, helios::vec3 origin ){
82 return buildTree(treename,origin,1);
83}
+
84
+
85uint WeberPennTree::buildTree( const char* treename, helios::vec3 origin, float scale ){
86
87 if( trees_library.find(treename)==trees_library.end() ){
@@ -348,7 +367,7 @@
268
269 for( uint s=0; s<stems_per_segment; s++ ){
270
-
271 vec3 base_position = nodes.at(i-1) + (nodes.at(i)-nodes.at(i-1))*float(s+0.5)/float(stems_per_segment);
+
271 vec3 base_position = nodes.at(i-1) + (nodes.at(i)-nodes.at(i-1))*float(s+0.5)/float(stems_per_segment);
272
273 float downangle = (parameters.nDownAngle.at(1)+getVariation(parameters.nDownAngleV.at(1)))*M_PI/180.f;
274 helios::SphericalCoord child_rotation = make_SphericalCoord(downangle,phi_child);
@@ -368,7 +387,7 @@
288 }
289 }
290
-
291 theta += (-parameters.nCurve.at(0)+getVariation(parameters.nCurveV.at(0)))/float(parameters.nCurveRes.at(0))*M_PI/180.f;
+
291 theta += (-parameters.nCurve.at(0)+getVariation(parameters.nCurveV.at(0)))/float(parameters.nCurveRes.at(0))*M_PI/180.f;
292
293 }
294
@@ -417,6 +436,7 @@
337 return TreeID;
338
339}
+
340
341void WeberPennTree::recursiveBranch( WeberPennTreeParameters parameters, uint n, uint seg_start, helios::vec3 base_position, helios::vec3 parent_normal, helios::SphericalCoord child_rotation, float length_parent, float radius_parent, float offset_child, helios::vec3 origin, float scale, const uint leaf_template, float base_size, uint base_splits ){
342
@@ -500,7 +520,7 @@
420 }else if( seg_start==0 ){
421 radius.at(0) = radius_parent*pow(length_child/length_parent,parameters.RatioPower);
422 }else{
-
423 radius.at(0) = radius_parent*pow(length_child/length_parent,parameters.RatioPower)*(1-parameters.nTaper.at(n)*float(seg_start)/float(parameters.nCurveRes.at(n)));
+
423 radius.at(0) = radius_parent*pow(length_child/length_parent,parameters.RatioPower)*(1-parameters.nTaper.at(n)*float(seg_start)/float(parameters.nCurveRes.at(n)));
424 }
425 nodes.at(0) = base_position;
426 color.at(0) = parameters.WoodColor;
@@ -740,6 +760,7 @@
660
661}
662
+
663std::vector<uint> WeberPennTree::getTrunkUUIDs( const uint TreeID ){
664
665 if( TreeID >= UUID_trunk.size() ){
@@ -749,7 +770,9 @@
669
670 return UUID_trunk.at(TreeID);
671}
+
672
+
673std::vector<uint> WeberPennTree::getBranchUUIDs( const uint TreeID ){
674
675 if( TreeID >= UUID_branch.size() ){
@@ -759,7 +782,9 @@
679
680 return UUID_branch.at(TreeID);
681}
+
682
+
683std::vector<uint> WeberPennTree::getLeafUUIDs( const uint TreeID ){
684
685 if( TreeID >= UUID_leaf.size() ){
@@ -769,7 +794,9 @@
689
690 return UUID_leaf.at(TreeID);
691}
+
692
+
693std::vector<uint> WeberPennTree::getAllUUIDs( const uint TreeID ){
694
695 if( TreeID >= UUID_leaf.size() ){
@@ -783,11 +810,15 @@
703 UUIDs.insert(UUIDs.end(),UUID_leaf.at(TreeID).begin(),UUID_leaf.at(TreeID).end());
704 return UUIDs;
705}
+
706
+
707void WeberPennTree::setBranchRecursionLevel( const uint level ){
708 branchLevels = level;
709}
+
710
+
711void WeberPennTree::setTrunkSegmentResolution( const uint segs ){
712 if( segs<3 ){
713 std::cout << "WARNING (WeberPennTree::setTrunkSegmentResolution): cannot set trunk segment resolution less than 3. Ignoring this command." << std::endl;
@@ -795,7 +826,9 @@
715 trunk_segs=segs;
716 }
717}
+
718
+
719void WeberPennTree::setBranchSegmentResolution( const uint segs ){
720 if( segs<3 ){
721 std::cout << "WARNING (WeberPennTree::setBranchSegmentResolution): cannot set branch segment resolution less than 3. Ignoring this command." << std::endl;
@@ -803,7 +836,9 @@
723 branch_segs=segs;
724 }
725}
+
726
+
727void WeberPennTree::setLeafSubdivisions( const helios::int2 segs ){
728 if( segs.x<1 || segs.y<1 ){
729 std::cout << "WARNING (WeberPennTree::setLeafSubdivisions): cannot set number of leaf subdivisions to less than 1. Ignoring this command." << std::endl;
@@ -811,7 +846,9 @@
731 leaf_segs=segs;
732 }
733}
+
734
+
735WeberPennTreeParameters WeberPennTree::getTreeParameters( const char* treename ){
736
737 if( trees_library.find(treename)==trees_library.end() ){
@@ -822,7 +859,9 @@
742 return trees_library.at(treename);
743
744}
+
745
+
746void WeberPennTree::setTreeParameters( const char* treename, const WeberPennTreeParameters parameters ){
747
748 if( trees_library.find(treename)==trees_library.end() ){
@@ -833,11 +872,15 @@
753 trees_library.at(treename) = parameters;
754
755}
+
756
+
757void WeberPennTree::seedRandomGenerator( const uint seed ){
758 generator.seed(seed);
759}
+
760
+
761void WeberPennTree::loadXML( const char* filename ){
762
763 std::cout << "Loading Weber Penn Tree library from XML file: " << filename << "..." << std::flush;
@@ -1543,7 +1586,9 @@
1463
1464
1465}
+
1466
+
1467void WeberPennTree::optionalOutputPrimitiveData( const char* label ){
1468
1469 if( strcmp(label,"element_type")==0 || strcmp(label,"branch_radius")==0 ){
@@ -1553,70 +1598,72 @@
1473 }
1474
1475}
-
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition: Context.h:45
+
+
helios::HELIOS_TYPE_UINT
@ HELIOS_TYPE_UINT
unsigned integer data type
Definition Context.h:45
- -
WeberPennTree::setLeafSubdivisions
void setLeafSubdivisions(const helios::int2 leaf_segs)
Set the number of sub-patch divisions for leaves.
Definition: WeberPennTree.cpp:727
-
WeberPennTree::getAllUUIDs
std::vector< uint > getAllUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition: WeberPennTree.cpp:693
-
WeberPennTree::loadXML
void loadXML(const char *filename)
Load tree library from an XML file.
Definition: WeberPennTree.cpp:761
-
WeberPennTree::setTreeParameters
void setTreeParameters(const char *treename, const WeberPennTreeParameters parameters)
Set the architectural parameters for a tree in the currently loaded library.
Definition: WeberPennTree.cpp:746
-
WeberPennTree::buildTree
uint buildTree(const char *treename, helios::vec3 origin)
Construct a Weber-Penn tree using a tree already in the library.
Definition: WeberPennTree.cpp:81
-
WeberPennTree::WeberPennTree
WeberPennTree(helios::Context *context)
Weber-Penn Tree constructor.
Definition: WeberPennTree.cpp:24
-
WeberPennTree::setBranchRecursionLevel
void setBranchRecursionLevel(const uint level)
Only create branch primitives up to a certain recursion level (leaves are still created for all level...
Definition: WeberPennTree.cpp:707
-
WeberPennTree::getBranchUUIDs
std::vector< uint > getBranchUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree branches.
Definition: WeberPennTree.cpp:673
-
WeberPennTree::seedRandomGenerator
void seedRandomGenerator(const uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition: WeberPennTree.cpp:757
-
WeberPennTree::setBranchSegmentResolution
void setBranchSegmentResolution(const uint branch_segs)
Set the radial triangle subdivisions for branches.
Definition: WeberPennTree.cpp:719
-
WeberPennTree::selfTest
int selfTest(void)
Unit testing routine.
Definition: WeberPennTree.cpp:44
-
WeberPennTree::getTreeParameters
WeberPennTreeParameters getTreeParameters(const char *treename)
Get the architectural parameters for a tree in the currently loaded library.
Definition: WeberPennTree.cpp:735
-
WeberPennTree::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree trunk.
Definition: WeberPennTree.cpp:663
-
WeberPennTree::setTrunkSegmentResolution
void setTrunkSegmentResolution(const uint trunk_segs)
Set the radial triangle subdivisions for trunks.
Definition: WeberPennTree.cpp:711
-
WeberPennTree::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: WeberPennTree.cpp:1467
-
WeberPennTree::getLeafUUIDs
std::vector< uint > getLeafUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree leaves.
Definition: WeberPennTree.cpp:683
-
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition: Context.cpp:2377
-
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition: Context.cpp:2353
-
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition: Context.cpp:2256
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition: Context.cpp:2642
-
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition: Context.cpp:2574
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition: Context.cpp:2609
-
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition: Context_data.cpp:655
-
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition: Context.cpp:3312
-
helios::Tile::getNormal
vec3 getNormal() const
Get a unit vector normal to the tile object surface.
Definition: Context.cpp:3385
-
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition: global.cpp:140
-
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:5930
-
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition: Context.cpp:4550
-
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition: global.cpp:79
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::string2RGBcolor
RGBAcolor string2RGBcolor(const char *str)
Convert a space-delimited string into an RGBcolor vector.
Definition: global.cpp:743
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::deblank
std::string deblank(const char *input)
Remove all whitespace from character array.
Definition: global.cpp:994
-
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition: helios_vector_types.h:99
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition: helios_vector_types.h:599
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
- -
helios::RGBAcolor
R-G-B-A color vector.
Definition: helios_vector_types.h:1024
-
helios::RGBAcolor::r
float r
Red color component.
Definition: helios_vector_types.h:1029
-
helios::RGBAcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:1035
-
helios::RGBAcolor::g
float g
Green color component.
Definition: helios_vector_types.h:1032
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
- -
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
+ +
WeberPennTree::setLeafSubdivisions
void setLeafSubdivisions(const helios::int2 leaf_segs)
Set the number of sub-patch divisions for leaves.
Definition WeberPennTree.cpp:727
+
WeberPennTree::getAllUUIDs
std::vector< uint > getAllUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition WeberPennTree.cpp:693
+
WeberPennTree::loadXML
void loadXML(const char *filename)
Load tree library from an XML file.
Definition WeberPennTree.cpp:761
+
WeberPennTree::setTreeParameters
void setTreeParameters(const char *treename, const WeberPennTreeParameters parameters)
Set the architectural parameters for a tree in the currently loaded library.
Definition WeberPennTree.cpp:746
+
WeberPennTree::buildTree
uint buildTree(const char *treename, helios::vec3 origin)
Construct a Weber-Penn tree using a tree already in the library.
Definition WeberPennTree.cpp:81
+
WeberPennTree::WeberPennTree
WeberPennTree(helios::Context *context)
Weber-Penn Tree constructor.
Definition WeberPennTree.cpp:24
+
WeberPennTree::setBranchRecursionLevel
void setBranchRecursionLevel(const uint level)
Only create branch primitives up to a certain recursion level (leaves are still created for all level...
Definition WeberPennTree.cpp:707
+
WeberPennTree::getBranchUUIDs
std::vector< uint > getBranchUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree branches.
Definition WeberPennTree.cpp:673
+
WeberPennTree::seedRandomGenerator
void seedRandomGenerator(const uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition WeberPennTree.cpp:757
+
WeberPennTree::setBranchSegmentResolution
void setBranchSegmentResolution(const uint branch_segs)
Set the radial triangle subdivisions for branches.
Definition WeberPennTree.cpp:719
+
WeberPennTree::selfTest
int selfTest(void)
Unit testing routine.
Definition WeberPennTree.cpp:44
+
WeberPennTree::getTreeParameters
WeberPennTreeParameters getTreeParameters(const char *treename)
Get the architectural parameters for a tree in the currently loaded library.
Definition WeberPennTree.cpp:735
+
WeberPennTree::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree trunk.
Definition WeberPennTree.cpp:663
+
WeberPennTree::setTrunkSegmentResolution
void setTrunkSegmentResolution(const uint trunk_segs)
Set the radial triangle subdivisions for trunks.
Definition WeberPennTree.cpp:711
+
WeberPennTree::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition WeberPennTree.cpp:1467
+
WeberPennTree::getLeafUUIDs
std::vector< uint > getLeafUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree leaves.
Definition WeberPennTree.cpp:683
+
helios::CompoundObject::rotate
void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
Method to rotate a Compound Object about the x-, y-, or z-axis.
Definition Context.cpp:2377
+
helios::CompoundObject::translate
void translate(const helios::vec3 &shift)
Method to translate/shift a Compound Object.
Definition Context.cpp:2353
+
helios::CompoundObject::getPrimitiveUUIDs
std::vector< uint > getPrimitiveUUIDs() const
Get the UUIDs for all primitives contained in the object.
Definition Context.cpp:2256
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::copyObject
uint copyObject(uint ObjID)
Make a copy of a Compound Objects from the context.
Definition Context.cpp:2642
+
helios::Context::getObjectPointer
CompoundObject * getObjectPointer(uint ObjID) const
Get a pointer to a Compound Object.
Definition Context.cpp:2574
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::deleteObject
void deleteObject(uint ObjID)
Delete a single Compound Object from the context.
Definition Context.cpp:2609
+
helios::Context::setPrimitiveData
void setPrimitiveData(const uint &UUID, const char *label, const int &data)
Add data value (int) associated with a primitive element.
Definition Context_data.cpp:655
+
helios::Context::getTileObjectPointer
Tile * getTileObjectPointer(uint ObjID) const
Get a pointer to a Tile Compound Object.
Definition Context.cpp:3312
+
helios::Tile::getNormal
vec3 getNormal() const
Get a unit vector normal to the tile object surface.
Definition Context.cpp:3385
+
helios::rotatePointAboutLine
vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
Rotate a 3D vector about an arbitrary line.
Definition global.cpp:140
+
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:5930
+
helios::Context::addTileObject
uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
Add a patch that is subdivided into a regular grid of sub-patches (tiled)
Definition Context.cpp:4550
+
helios::rotatePoint
vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
Function to rotate a 3D vector given spherical angles elevation and azimuth.
Definition global.cpp:79
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::string2RGBcolor
RGBAcolor string2RGBcolor(const char *str)
Convert a space-delimited string into an RGBcolor vector.
Definition global.cpp:743
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::deblank
std::string deblank(const char *input)
Remove all whitespace from character array.
Definition global.cpp:994
+
helios::make_int2
int2 make_int2(int x, int y)
Make an int2 vector from two ints.
Definition helios_vector_types.h:99
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::cross
vec3 cross(const vec3 &a, const vec3 &b)
Cross product of two vec3 vectors.
Definition helios_vector_types.h:599
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+ +
helios::RGBAcolor
R-G-B-A color vector.
Definition helios_vector_types.h:1024
+
helios::RGBAcolor::r
float r
Red color component.
Definition helios_vector_types.h:1029
+
helios::RGBAcolor::b
float b
Blue color component.
Definition helios_vector_types.h:1035
+
helios::RGBAcolor::g
float g
Green color component.
Definition helios_vector_types.h:1032
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+ +
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/_weber_penn_tree_8h.html b/doc/html/_weber_penn_tree_8h.html index 90d260ae9..96ba188b5 100644 --- a/doc/html/_weber_penn_tree_8h.html +++ b/doc/html/_weber_penn_tree_8h.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Data Structures
@@ -116,7 +128,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/_weber_penn_tree_8h_source.html b/doc/html/_weber_penn_tree_8h_source.html index 0e93be565..2ab7c8139 100644 --- a/doc/html/_weber_penn_tree_8h_source.html +++ b/doc/html/_weber_penn_tree_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
WeberPennTree.h
@@ -96,6 +108,7 @@
16#include "Context.h"
17#include <random>
18
+
19struct WeberPennTreeParameters{
20
21 // Name of tree
@@ -171,12 +184,14 @@
91 std::vector<float> leafAngleCDF;
92
93};
+
94
+
95class WeberPennTree{
96 public:
97
99
-
101 WeberPennTree( helios::Context* context );
+
101 WeberPennTree( helios::Context* context );
102
104 int selfTest( void );
105
@@ -257,33 +272,36 @@
235 std::vector<std::string> output_prim_data;
236
237};
+
- -
WeberPennTree::setLeafSubdivisions
void setLeafSubdivisions(const helios::int2 leaf_segs)
Set the number of sub-patch divisions for leaves.
Definition: WeberPennTree.cpp:727
-
WeberPennTree::getAllUUIDs
std::vector< uint > getAllUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition: WeberPennTree.cpp:693
-
WeberPennTree::loadXML
void loadXML(const char *filename)
Load tree library from an XML file.
Definition: WeberPennTree.cpp:761
-
WeberPennTree::setTreeParameters
void setTreeParameters(const char *treename, const WeberPennTreeParameters parameters)
Set the architectural parameters for a tree in the currently loaded library.
Definition: WeberPennTree.cpp:746
-
WeberPennTree::buildTree
uint buildTree(const char *treename, helios::vec3 origin)
Construct a Weber-Penn tree using a tree already in the library.
Definition: WeberPennTree.cpp:81
-
WeberPennTree::setBranchRecursionLevel
void setBranchRecursionLevel(const uint level)
Only create branch primitives up to a certain recursion level (leaves are still created for all level...
Definition: WeberPennTree.cpp:707
-
WeberPennTree::getBranchUUIDs
std::vector< uint > getBranchUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree branches.
Definition: WeberPennTree.cpp:673
-
WeberPennTree::seedRandomGenerator
void seedRandomGenerator(const uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition: WeberPennTree.cpp:757
-
WeberPennTree::setBranchSegmentResolution
void setBranchSegmentResolution(const uint branch_segs)
Set the radial triangle subdivisions for branches.
Definition: WeberPennTree.cpp:719
-
WeberPennTree::selfTest
int selfTest(void)
Unit testing routine.
Definition: WeberPennTree.cpp:44
-
WeberPennTree::getTreeParameters
WeberPennTreeParameters getTreeParameters(const char *treename)
Get the architectural parameters for a tree in the currently loaded library.
Definition: WeberPennTree.cpp:735
-
WeberPennTree::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree trunk.
Definition: WeberPennTree.cpp:663
-
WeberPennTree::setTrunkSegmentResolution
void setTrunkSegmentResolution(const uint trunk_segs)
Set the radial triangle subdivisions for trunks.
Definition: WeberPennTree.cpp:711
-
WeberPennTree::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition: WeberPennTree.cpp:1467
-
WeberPennTree::getLeafUUIDs
std::vector< uint > getLeafUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree leaves.
Definition: WeberPennTree.cpp:683
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
- -
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::int2
Vector of two elements of type 'int'.
Definition: helios_vector_types.h:44
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
+ +
WeberPennTree::setLeafSubdivisions
void setLeafSubdivisions(const helios::int2 leaf_segs)
Set the number of sub-patch divisions for leaves.
Definition WeberPennTree.cpp:727
+
WeberPennTree::getAllUUIDs
std::vector< uint > getAllUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
Definition WeberPennTree.cpp:693
+
WeberPennTree::loadXML
void loadXML(const char *filename)
Load tree library from an XML file.
Definition WeberPennTree.cpp:761
+
WeberPennTree::setTreeParameters
void setTreeParameters(const char *treename, const WeberPennTreeParameters parameters)
Set the architectural parameters for a tree in the currently loaded library.
Definition WeberPennTree.cpp:746
+
WeberPennTree::buildTree
uint buildTree(const char *treename, helios::vec3 origin)
Construct a Weber-Penn tree using a tree already in the library.
Definition WeberPennTree.cpp:81
+
WeberPennTree::WeberPennTree
WeberPennTree(helios::Context *context)
Weber-Penn Tree constructor.
Definition WeberPennTree.cpp:24
+
WeberPennTree::setBranchRecursionLevel
void setBranchRecursionLevel(const uint level)
Only create branch primitives up to a certain recursion level (leaves are still created for all level...
Definition WeberPennTree.cpp:707
+
WeberPennTree::getBranchUUIDs
std::vector< uint > getBranchUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree branches.
Definition WeberPennTree.cpp:673
+
WeberPennTree::seedRandomGenerator
void seedRandomGenerator(const uint seed)
Seed the random number generator. This can be useful for generating repeatable trees,...
Definition WeberPennTree.cpp:757
+
WeberPennTree::setBranchSegmentResolution
void setBranchSegmentResolution(const uint branch_segs)
Set the radial triangle subdivisions for branches.
Definition WeberPennTree.cpp:719
+
WeberPennTree::selfTest
int selfTest(void)
Unit testing routine.
Definition WeberPennTree.cpp:44
+
WeberPennTree::getTreeParameters
WeberPennTreeParameters getTreeParameters(const char *treename)
Get the architectural parameters for a tree in the currently loaded library.
Definition WeberPennTree.cpp:735
+
WeberPennTree::getTrunkUUIDs
std::vector< uint > getTrunkUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree trunk.
Definition WeberPennTree.cpp:663
+
WeberPennTree::setTrunkSegmentResolution
void setTrunkSegmentResolution(const uint trunk_segs)
Set the radial triangle subdivisions for trunks.
Definition WeberPennTree.cpp:711
+
WeberPennTree::optionalOutputPrimitiveData
void optionalOutputPrimitiveData(const char *label)
Add optional output primitive data values to the Context.
Definition WeberPennTree.cpp:1467
+
WeberPennTree::getLeafUUIDs
std::vector< uint > getLeafUUIDs(const uint TreeID)
Get the unique universal identifiers (UUIDs) for the primitives that make up the tree leaves.
Definition WeberPennTree.cpp:683
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+ +
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::int2
Vector of two elements of type 'int'.
Definition helios_vector_types.h:44
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/aeriallidar_2include_2random_8h_source.html b/doc/html/aeriallidar_2include_2random_8h_source.html index 1fb1491a5..77094eb7a 100644 --- a/doc/html/aeriallidar_2include_2random_8h_source.html +++ b/doc/html/aeriallidar_2include_2random_8h_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
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- + + + + +
random.h
@@ -149,7 +161,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/aeriallidar_2src_2file_i_o_8cpp.html b/doc/html/aeriallidar_2src_2file_i_o_8cpp.html index e6408c3b9..1f65b2b21 100644 --- a/doc/html/aeriallidar_2src_2file_i_o_8cpp.html +++ b/doc/html/aeriallidar_2src_2file_i_o_8cpp.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
fileIO.cpp File Reference
@@ -106,7 +118,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/aeriallidar_2src_2file_i_o_8cpp_source.html b/doc/html/aeriallidar_2src_2file_i_o_8cpp_source.html index 004fd9f42..e620d7e27 100644 --- a/doc/html/aeriallidar_2src_2file_i_o_8cpp_source.html +++ b/doc/html/aeriallidar_2src_2file_i_o_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + + +
fileIO.cpp
@@ -99,6 +111,7 @@
19using namespace helios;
20using namespace std;
21
+
22void AerialLiDARcloud::loadXML( const char* filename ){
23
24 if( printmessages ){
@@ -467,36 +480,38 @@
387 }
388
389}
+
-
AerialLiDARcloud::addScan
void addScan(const AerialScanMetadata newscan)
Add a LiDAR scan to the point cloud.
Definition: AerialLiDAR.cpp:292
-
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition: AerialLiDAR.cpp:296
-
AerialLiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition: fileIO.cpp:22
-
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition: AerialLiDAR.cpp:288
-
helios::string2vec2
vec2 string2vec2(const char *str)
Convert a space-delimited string into a vec2 vector.
Definition: global.cpp:623
-
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition: global.cpp:576
-
helios::string2vec3
vec3 string2vec3(const char *str)
Convert a space-delimited string into a vec3 vector.
Definition: global.cpp:643
-
helios::deblank
std::string deblank(const char *input)
Remove all whitespace from character array.
Definition: global.cpp:994
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition: helios_vector_types.h:954
-
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition: helios_vector_types.h:198
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
AerialScanMetadata
Structure containing metadata for an aerial scan.
Definition: AerialLiDAR.h:26
-
helios::RGBcolor
R-G-B color vector.
Definition: helios_vector_types.h:844
-
helios::RGBcolor::b
float b
Blue color component.
Definition: helios_vector_types.h:855
-
helios::RGBcolor::r
float r
Red color component.
Definition: helios_vector_types.h:849
-
helios::RGBcolor::g
float g
Green color component.
Definition: helios_vector_types.h:852
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec2::x
float x
First element in vector.
Definition: helios_vector_types.h:350
-
helios::vec2::y
float y
Second element in vector.
Definition: helios_vector_types.h:352
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::x
float x
First element in vector.
Definition: helios_vector_types.h:507
-
helios::vec3::z
float z
Third element in vector.
Definition: helios_vector_types.h:511
-
helios::vec3::y
float y
Second element in vector.
Definition: helios_vector_types.h:509
+
AerialLiDARcloud::addScan
void addScan(const AerialScanMetadata newscan)
Add a LiDAR scan to the point cloud.
Definition AerialLiDAR.cpp:292
+
AerialLiDARcloud::addHitPoint
void addHitPoint(const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
Definition AerialLiDAR.cpp:296
+
AerialLiDARcloud::loadXML
void loadXML(const char *filename)
Read an XML file containing scan information.
Definition fileIO.cpp:22
+
AerialLiDARcloud::getScanCount
uint getScanCount(void)
Get number of scans in point cloud.
Definition AerialLiDAR.cpp:288
+
helios::string2vec2
vec2 string2vec2(const char *str)
Convert a space-delimited string into a vec2 vector.
Definition global.cpp:623
+
helios::deg2rad
float deg2rad(float deg)
Convert degrees to radians.
Definition global.cpp:576
+
helios::string2vec3
vec3 string2vec3(const char *str)
Convert a space-delimited string into a vec3 vector.
Definition global.cpp:643
+
helios::deblank
std::string deblank(const char *input)
Remove all whitespace from character array.
Definition global.cpp:994
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_RGBcolor
RGBcolor make_RGBcolor(float r, float g, float b)
Make an RGBcolor vector.
Definition helios_vector_types.h:954
+
helios::make_int3
int3 make_int3(int X, int Y, int Z)
Make an int3 vector from three ints.
Definition helios_vector_types.h:198
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
AerialScanMetadata
Structure containing metadata for an aerial scan.
Definition AerialLiDAR.h:26
+
helios::RGBcolor
R-G-B color vector.
Definition helios_vector_types.h:844
+
helios::RGBcolor::b
float b
Blue color component.
Definition helios_vector_types.h:855
+
helios::RGBcolor::r
float r
Red color component.
Definition helios_vector_types.h:849
+
helios::RGBcolor::g
float g
Green color component.
Definition helios_vector_types.h:852
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec2::x
float x
First element in vector.
Definition helios_vector_types.h:350
+
helios::vec2::y
float y
Second element in vector.
Definition helios_vector_types.h:352
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::x
float x
First element in vector.
Definition helios_vector_types.h:507
+
helios::vec3::z
float z
Third element in vector.
Definition helios_vector_types.h:511
+
helios::vec3::y
float y
Second element in vector.
Definition helios_vector_types.h:509
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/annotated.html b/doc/html/annotated.html index f118b1fda..c80081801 100644 --- a/doc/html/annotated.html +++ b/doc/html/annotated.html @@ -38,31 +38,43 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Here are the data structures with brief descriptions:
-
[detail level 12]
- +
[detail level 12]
 ▼Nhelios
+ @@ -128,7 +140,7 @@ - + @@ -195,7 +207,8 @@
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/bdwn.png b/doc/html/bdwn.png deleted file mode 100644 index 940a0b950443a0bb1b216ac03c45b8a16c955452..0000000000000000000000000000000000000000 GIT binary patch literal 0 HcmV?d00001 literal 147 zcmeAS@N?(olHy`uVBq!ia0vp^>_E)H!3HEvS)PKZC{Gv1kP61Pb5HX&C2wk~_T
 ▼Nhelios
 CBoxBox compound object class
 CCompoundObject
 CConeCone compound object class
 CBLConductanceModelBoundary-layer conductance model class
 CBMFcoefficientsCoefficients for simplified Buckley, Mott, & Farquhar stomatal conductance model
 CBWBcoefficientsCoefficients for original Ball, Woodrow, Berry (1987) stomatal conductance model
 ▼CCameraCalibrationCamera calibration structure used for camera calibration tasks
 ▼CCameraCalibrationCamera calibration structure used for camera calibration tasks
 CGradientDescentParametersParameter struct for gradient descent
 CCameraPropertiesProperties defining a radiation camera
 CCanopyGenerator
-
 v1.3.25 +
 v1.3.26
- + + + +
+
bean.cpp
@@ -382,6 +394,7 @@
288
289}
290
+
291uint CanopyGenerator::bean(const BeanParameters &params, const vec3 &origin ){
292
293 std::vector<std::vector<uint> > leaf_UUIDs;
@@ -401,47 +414,49 @@
307 return UUID_leaf.size()-1;
308
309}
+
-
interpolateTube
helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition: CanopyGenerator.cpp:3251
-
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
Draw a random number (float) from a uniform distribution between -V and V.
Definition: CanopyGenerator.cpp:3004
-
CanopyGenerator::bean
uint bean(const BeanParameters &params, const helios::vec3 &origin)
Function to add an individual bean plant.
Definition: bean.cpp:291
-
helios::Context
Stores the state associated with simulation.
Definition: Context.h:1882
-
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition: Context.cpp:1406
-
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition: Context.cpp:1536
-
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition: Context.cpp:1178
-
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition: Context.cpp:1420
-
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition: Context.cpp:1578
-
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition: Context.cpp:1491
-
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition: Context.cpp:5930
-
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition: global.cpp:610
-
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition: global.cpp:617
-
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition: Context.cpp:1328
-
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition: helios_vector_types.h:433
-
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition: helios_vector_types.h:589
-
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition: helios_vector_types.h:1602
-
BeanParameters
Parameters defining the bean plant canopy.
Definition: CanopyGenerator.h:983
-
BeanParameters::leaflet_length
float leaflet_length
Length of the leaflet from base to tip leaf.
Definition: CanopyGenerator.h:1027
-
BeanParameters::pod_length
float pod_length
Length of bean pods.
Definition: CanopyGenerator.h:1042
-
BeanParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition: CanopyGenerator.h:1006
-
BeanParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition: CanopyGenerator.h:1018
-
BeanParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition: CanopyGenerator.h:1009
-
BeanParameters::stem_length
float stem_length
Length of stems before splitting to leaflets.
Definition: CanopyGenerator.h:1024
-
BeanParameters::stem_radius
float stem_radius
Radius of main stem at base.
Definition: CanopyGenerator.h:1021
-
BeanParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition: CanopyGenerator.h:1012
-
BeanParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition: CanopyGenerator.h:1015
-
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition: helios_vector_types.h:1534
-
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition: helios_vector_types.h:1553
-
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition: helios_vector_types.h:1548
-
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition: helios_vector_types.h:1555
-
helios::int2::y
int y
Second element in vector.
Definition: helios_vector_types.h:50
-
helios::int2::x
int x
First element in vector.
Definition: helios_vector_types.h:48
-
helios::vec2
Vector of two elements of type 'float'.
Definition: helios_vector_types.h:346
-
helios::vec3
Vector of three elements of type 'float'.
Definition: helios_vector_types.h:503
-
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition: helios_vector_types.h:514
+
interpolateTube
helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
Interpolate the position of a point along a tube.
Definition CanopyGenerator.cpp:3251
+
getVariation
float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
Draw a random number (float) from a uniform distribution between -V and V.
Definition CanopyGenerator.cpp:3004
+
CanopyGenerator::bean
uint bean(const BeanParameters &params, const helios::vec3 &origin)
Function to add an individual bean plant.
Definition bean.cpp:291
+
helios::Context
Stores the state associated with simulation.
Definition Context.h:1882
+
helios::Context::translatePrimitive
void translatePrimitive(uint UUID, const vec3 &shift)
Translate a primitive using its UUID.
Definition Context.cpp:1406
+
helios::Context::deletePrimitive
void deletePrimitive(uint UUID)
Delete a single primitive from the context.
Definition Context.cpp:1536
+
helios::Context::randu
float randu()
Draw a random number from a uniform distribution between 0 and 1.
Definition Context.cpp:1178
+
helios::Context::rotatePrimitive
void rotatePrimitive(uint UUID, float rot, const char *axis)
Rotate a primitive about the x, y, or z axis using its UUID.
Definition Context.cpp:1420
+
helios::Context::copyPrimitive
uint copyPrimitive(uint UUID)
Make a copy of a primitive from the context.
Definition Context.cpp:1578
+
helios::Context::scalePrimitive
void scalePrimitive(uint UUID, const helios::vec3 &S)
Scale a primitive using its UUID relative to the origin (0,0,0)
Definition Context.cpp:1491
+
helios::Context::addTube
std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
Add a 3D tube compound object to the Context.
Definition Context.cpp:5930
+
helios::cart2sphere
SphericalCoord cart2sphere(const vec3 &Cartesian)
Convert Cartesian coordinates to spherical coordinates.
Definition global.cpp:610
+
helios::sphere2cart
vec3 sphere2cart(const SphericalCoord &Spherical)
Convert Spherical coordinates to Cartesian coordinates.
Definition global.cpp:617
+
helios::Context::addTriangle
uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
Add new Triangle geometric primitive.
Definition Context.cpp:1328
+
helios::make_vec2
vec2 make_vec2(float x, float y)
Make a vec2 from two floats.
Definition helios_vector_types.h:433
+
helios::make_vec3
vec3 make_vec3(float x, float y, float z)
Make a vec3 from three floats.
Definition helios_vector_types.h:589
+
helios::make_SphericalCoord
SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
Make a SphericalCoord by specifying elevation and azimuth.
Definition helios_vector_types.h:1602
+
BeanParameters
Parameters defining the bean plant canopy.
Definition CanopyGenerator.h:983
+
BeanParameters::leaflet_length
float leaflet_length
Length of the leaflet from base to tip leaf.
Definition CanopyGenerator.h:1027
+
BeanParameters::pod_length
float pod_length
Length of bean pods.
Definition CanopyGenerator.h:1042
+
BeanParameters::leaf_length
float leaf_length
Maximum width of leaves.
Definition CanopyGenerator.h:1006
+
BeanParameters::shoot_subdivisions
int shoot_subdivisions
Number of radial subdivisions for shoot tubes.
Definition CanopyGenerator.h:1018
+
BeanParameters::leaf_subdivisions
helios::int2 leaf_subdivisions
Number of sub-division segments per leaf.
Definition CanopyGenerator.h:1009
+
BeanParameters::stem_length
float stem_length
Length of stems before splitting to leaflets.
Definition CanopyGenerator.h:1024
+
BeanParameters::stem_radius
float stem_radius
Radius of main stem at base.
Definition CanopyGenerator.h:1021
+
BeanParameters::leaf_texture_file
std::string leaf_texture_file
Path to texture map file for leaves.
Definition CanopyGenerator.h:1012
+
BeanParameters::shoot_color
helios::RGBcolor shoot_color
Color of shoots.
Definition CanopyGenerator.h:1015
+
helios::SphericalCoord
Vector of spherical coordinates (elevation,azimuth)
Definition helios_vector_types.h:1534
+
helios::SphericalCoord::zenith
const float & zenith
Zenithal angle (radians)
Definition helios_vector_types.h:1553
+
helios::SphericalCoord::elevation
const float & elevation
Elevation angle (radians)
Definition helios_vector_types.h:1548
+
helios::SphericalCoord::azimuth
float azimuth
Azimuthal angle (radians)
Definition helios_vector_types.h:1555
+
helios::int2::y
int y
Second element in vector.
Definition helios_vector_types.h:50
+
helios::int2::x
int x
First element in vector.
Definition helios_vector_types.h:48
+
helios::vec2
Vector of two elements of type 'float'.
Definition helios_vector_types.h:346
+
helios::vec3
Vector of three elements of type 'float'.
Definition helios_vector_types.h:503
+
helios::vec3::normalize
vec3 normalize()
Normalize vector components such that the magnitude is unity.
Definition helios_vector_types.h:514
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/class_aerial_li_d_a_rcloud.html b/doc/html/class_aerial_li_d_a_rcloud.html index 225b03c4f..1f3a9de4d 100644 --- a/doc/html/class_aerial_li_d_a_rcloud.html +++ b/doc/html/class_aerial_li_d_a_rcloud.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
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Public Member Functions
@@ -92,222 +104,222 @@

Primary class for aerial LiDAR scan. - More...

+ More...

#include <AerialLiDAR.h>

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Public Member Functions

 AerialLiDARcloud (void)
 AerialLiDARcloud (void)
 Aerial LiDAR point cloud constructor.
 
 ~AerialLiDARcloud (void)
 ~AerialLiDARcloud (void)
 Aerial LiDAR point cloud destructor.
 
int selfTest (void)
int selfTest (void)
 Self-test (unit test) function.
 
void disableMessages (void)
void disableMessages (void)
 Disable all print messages to the screen except for fatal error messages.
 
void enableMessages (void)
void enableMessages (void)
 Enable all print messages to the screen.
 
uint getScanCount (void)
uint getScanCount (void)
 Get number of scans in point cloud.
 
void addScan (const AerialScanMetadata newscan)
void addScan (const AerialScanMetadata newscan)
 Add a LiDAR scan to the point cloud.
 
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::vec3 ray_origin)
 Specify a scan point as a hit by providing the (x,y,z) coordinates of the origin and hit point.
 
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction)
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction)
 Specify a scan point as a hit by providing the (x,y,z) coordinates of the hit and scan ray direction.
 
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const helios::RGBcolor color)
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const helios::RGBcolor color)
 Specify a scan point as a hit by providing the (x,y,z) coordinates of the hit and scan ray direction.
 
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const std::map< std::string, float > data)
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const std::map< std::string, float > data)
 Specify a scan point as a hit by providing the (x,y,z) coordinates of the hit and scan ray direction.
 
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const helios::RGBcolor color, const std::map< std::string, float > data)
void addHitPoint (const uint scanID, const helios::vec3 hit_xyz, const helios::SphericalCoord direction, const helios::RGBcolor color, const std::map< std::string, float > data)
 Specify a scan point as a hit by providing the (x,y,z) coordinates of the hit and scan ray direction.
 
void deleteHitPoint (const uint index)
void deleteHitPoint (const uint index)
 Delete a hit point in the scan.
 
uint getHitCount (void) const
uint getHitCount (void) const
 Get the number of hit points in the point cloud.
 
helios::vec3 getScanCenter (const uint scanID) const
helios::vec3 getScanCenter (const uint scanID) const
 Get the (x,y,z) of scan surface center.
 
helios::vec2 getScanExtent (const uint scanID) const
helios::vec2 getScanExtent (const uint scanID) const
 Get the (x,y) extent of scan surface.
 
float getScanConeAngle (const uint scanID) const
float getScanConeAngle (const uint scanID) const
 Get the scan cone angle in degrees.
 
float getScanDensity (const uint scanID) const
float getScanDensity (const uint scanID) const
 Get the scan point density in points/m^2.
 
float getScanBeamExitDiameter (const uint scanID) const
float getScanBeamExitDiameter (const uint scanID) const
 Get the diameter of the laser beam at exit from the instrument.
 
float getScanBeamDivergence (const uint scanID) const
float getScanBeamDivergence (const uint scanID) const
 Divergence angle of the laser beam in radians.
 
helios::vec3 getHitXYZ (uint index) const
helios::vec3 getHitXYZ (uint index) const
 Get (x,y,z) coordinate of hit point by index.
 
helios::SphericalCoord getHitRaydir (const uint index) const
helios::SphericalCoord getHitRaydir (const uint index) const
 Get ray direction of hit point in the scan based on its index.
 
float getHitData (const uint index, const char *label) const
float getHitData (const uint index, const char *label) const
 Get floating point data value associated with a hit point.
 
void setHitData (const uint index, const char *label, const float value)
void setHitData (const uint index, const char *label, const float value)
 Set floating point data value associated with a hit point.
 
bool doesHitDataExist (const uint index, const char *label) const
bool doesHitDataExist (const uint index, const char *label) const
 Check if scalar data exists for a hit point.
 
helios::RGBcolor getHitColor (const uint index) const
helios::RGBcolor getHitColor (const uint index) const
 Get color of hit point.
 
int getHitScanID (const uint index) const
int getHitScanID (const uint index) const
 Get the scan with which a hit is associated.
 
helios::int3 getHitGridCell (const uint index) const
helios::int3 getHitGridCell (const uint index) const
 Get the grid cell in which the hit point resides.
 
void setHitGridCell (const uint index, const helios::int3 ijk)
void setHitGridCell (const uint index, const helios::int3 ijk)
 Set the grid cell in which the hit point resides.
 
void coordinateShift (const helios::vec3 shift)
void coordinateShift (const helios::vec3 shift)
 
void loadXML (const char *filename)
void loadXML (const char *filename)
 Read an XML file containing scan information.
 
+
void readContextXML (void)
 Read all XML files currently loaded into the Helios context.
 
void exportPointCloud (const char *filename)
void exportPointCloud (const char *filename)
 Export to file all points in the point cloud.
 
void addHitsToVisualizer (Visualizer *visualizer, const uint pointsize) const
void addHitsToVisualizer (Visualizer *visualizer, const uint pointsize) const
 Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
 
void addHitsToVisualizer (Visualizer *visualizer, const uint pointsize, const char *color_value) const
void addHitsToVisualizer (Visualizer *visualizer, const uint pointsize, const char *color_value) const
 Add all hit points to the visualizer plug-in, and color them by a hit scalar data value.
 
void addGridToVisualizer (Visualizer *visualizer) const
void addGridToVisualizer (Visualizer *visualizer) const
 Add all grid cells to the visualizer plug-in.
 
void getHitBoundingBox (helios::vec3 &boxmin, helios::vec3 &boxmax) const
void getHitBoundingBox (helios::vec3 &boxmin, helios::vec3 &boxmax) const
 Form an axis-aligned bounding box for all hit points in the point cloud.
 
void distanceFilter (const float maxdistance)
void distanceFilter (const float maxdistance)
 Filter scan by imposing a maximum distance from the scanner.
 
void reflectanceFilter (const float minreflectance)
void reflectanceFilter (const float minreflectance)
 Filter scan by imposing a minimum reflectance value.
 
void scalarFilter (const char *scalar_field, const float threshold, const char *comparator)
void scalarFilter (const char *scalar_field, const float threshold, const char *comparator)
 Filter hit points based on a scalar field given by a column in the ASCII data.
 
helios::int3 gridindex2ijk (const int index) const
helios::int3 gridindex2ijk (const int index) const
 Use a global index of a grid cell (ranging from 0 to Ncells-1) to retrieve the local index in the x-, y-, and z-directions.
 
int gridijk2index (const helios::int3 ijk) const
int gridijk2index (const helios::int3 ijk) const
 Use a grid cell's local index in the x-, y-, and z-directions to retrieve the cells' global index (ranging from 0 to Ncells-1)
 
helios::vec3 getGridCenter (void) const
helios::vec3 getGridCenter (void) const
 Get the (x,y,z) coordinate of the grid center.
 
helios::vec3 getGridExtent (void) const
helios::vec3 getGridExtent (void) const
 Get the size of the global grid in the x-, y-, and z-directions.
 
helios::int3 getGridResolution (void) const
helios::int3 getGridResolution (void) const
 Get the total number of cells in the grid.
 
float getGridRotation () const
float getGridRotation () const
 Get the azimuthal rotation angle of the grid about its center point.
 
helios::vec3 getCellCenter (const helios::int3 ijk) const
helios::vec3 getCellCenter (const helios::int3 ijk) const
 Get the center of the (i,j,k)th grid cell.
 
helios::vec3 getCellSize () const
helios::vec3 getCellSize () const
 Get the size of grid cells.
 
void calculateHitGridCell ()
void calculateHitGridCell ()
 Determine the grid cell in which each hit point resides for the whole point cloud *‍/.
 
void syntheticScan (helios::Context *context, const char *xml_file)
void syntheticScan (helios::Context *context, const char *xml_file)
 Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file.
 
void syntheticScan (helios::Context *context, const char *xml_file, const int rays_per_pulse, const float pulse_distance_threshold)
void syntheticScan (helios::Context *context, const char *xml_file, const int rays_per_pulse, const float pulse_distance_threshold)
 Run a full-waveform synthetic LiDAR scan based on scan parameters given in an XML file (returns multiple laser hit points per pulse)
 
void calculateSyntheticLeafArea (helios::Context *context)
void calculateSyntheticLeafArea (helios::Context *context)
 Calculate the surface area of all primitives in the context.
 
void setCellLeafArea (const float area, const helios::int3 ijk)
void setCellLeafArea (const float area, const helios::int3 ijk)
 Set the leaf area of a grid cell in m^2.
 
float getCellLeafArea (const helios::int3 ijk) const
float getCellLeafArea (const helios::int3 ijk) const
 Get the leaf area of a grid cell in m^2.
 
float getCellLeafAreaDensity (const helios::int3 ijk) const
float getCellLeafAreaDensity (const helios::int3 ijk) const
 Get the leaf area density of a grid cell in 1/m.
 
void setCellTransmissionProbability (const int P_denom, const int P_trans, const helios::int3 ijk)
void setCellTransmissionProbability (const int P_denom, const int P_trans, const helios::int3 ijk)
 Set the cell transmission probability counts.
 
void getCellTransmissionProbability (const helios::int3 ijk, int &P_denom, int &P_trans) const
void getCellTransmissionProbability (const helios::int3 ijk, int &P_denom, int &P_trans) const
 Get the cell transmission probability counts.
 
void setCellRbar (const float r_bar, const helios::int3 ijk)
void setCellRbar (const float r_bar, const helios::int3 ijk)
 Set the average ray propagation distance in meters.
 
float getCellRbar (const helios::int3 ijk) const
float getCellRbar (const helios::int3 ijk) const
 Get the average ray propagation distance in meters.
 
void calculateLeafAreaGPU (const float Gtheta)
void calculateLeafAreaGPU (const float Gtheta)
 Calculate the leaf area for each grid volume.
 
void calculateLeafAreaGPU (const float Gtheta, const int minVoxelHits)
void calculateLeafAreaGPU (const float Gtheta, const int minVoxelHits)
 Calculate the leaf area for each grid volume.
 
void generateHeightModel (const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation)
void generateHeightModel (const int maxIter, const float threshDist_ground, const float inlierRatio_ground, const float threshDist_vegetation, const float inlierRatio_vegetation)
 Determine the ground and vegetation height for each x-y grid cell. Inputs to this function are parameters for applying the RANSAC algorithm.
 
void setCellVegetationHeight (const float height, const helios::int2 ij)
void setCellVegetationHeight (const float height, const helios::int2 ij)
 Set the height of the vegetation at the (x,y) location of this gridcell.
 
float getCellVegetationHeight (const helios::int2 ij) const
float getCellVegetationHeight (const helios::int2 ij) const
 Get the height of the vegetation at the (x,y) location of this gridcell.
 
void setCellMaximumHitHeight (const float height, const helios::int2 ij)
void setCellMaximumHitHeight (const float height, const helios::int2 ij)
 Set the height of the highest hit point at the (x,y) location of this gridcell.
 
float getCellMaximumHitHeight (const helios::int2 ij) const
float getCellMaximumHitHeight (const helios::int2 ij) const
 Get the height of the highest hit point at the (x,y) location of this gridcell.
 
void setCellGroundHeight (const float height, const helios::int2 ij)
void setCellGroundHeight (const float height, const helios::int2 ij)
 Set the height of the ground at the (x,y) location of this gridcell.
 
float getCellGroundHeight (const helios::int2 ij) const
float getCellGroundHeight (const helios::int2 ij) const
 Get the height of the ground at the (x,y) location of this gridcell.
 
void calculateCoverFraction (void)
void calculateCoverFraction (void)
 
void setCellCoverFraction (const float cover_fraction, const helios::int2 ij)
void setCellCoverFraction (const float cover_fraction, const helios::int2 ij)
 Set the ground cover fraction at the (x,y) location of this gridcell.
 
float getCellCoverFraction (const helios::int2 ij) const
float getCellCoverFraction (const helios::int2 ij) const
 Get the height of the ground at the (x,y) location of this gridcell.
 
@@ -325,8 +337,7 @@

AerialLiDARcloud::AerialLiDARcloud ( - void  - ) + void ) @@ -347,8 +358,7 @@

AerialLiDARcloud::~AerialLiDARcloud ( - void  - ) + void ) @@ -370,8 +380,7 @@

void AerialLiDARcloud::addGridToVisualizer ( - Visualizer *  - visualizer) + Visualizer * visualizer) const @@ -398,25 +407,17 @@

void AerialLiDARcloud::addHitPoint ( - const uint  - scanID, + const uint scanID, - const helios::vec3  - hit_xyz, + const helios::vec3 hit_xyz, - const helios::SphericalCoord  - direction  - - - - ) - + const helios::SphericalCoord direction )

@@ -444,31 +445,22 @@

void AerialLiDARcloud::addHitPoint ( - const uint  - scanID, + const uint scanID, - const helios::vec3  - hit_xyz, + const helios::vec3 hit_xyz, - const helios::SphericalCoord  - direction, + const helios::SphericalCoord direction, - const helios::RGBcolor  - color  - - - - ) - + const helios::RGBcolor color )

@@ -498,37 +490,27 @@

void AerialLiDARcloud::addHitPoint ( - const uint  - scanID, + const uint scanID, - const helios::vec3  - hit_xyz, + const helios::vec3 hit_xyz, - const helios::SphericalCoord  - direction, + const helios::SphericalCoord direction, - const helios::RGBcolor  - color, + const helios::RGBcolor color, - const std::map< std::string, float >  - data  - - - - ) - + const std::map< std::string, float > data )

@@ -558,31 +540,22 @@

void AerialLiDARcloud::addHitPoint ( - const uint  - scanID, + const uint scanID, - const helios::vec3  - hit_xyz, + const helios::vec3 hit_xyz, - const helios::SphericalCoord  - direction, + const helios::SphericalCoord direction, - const std::map< std::string, float >  - data  - - - - ) - + const std::map< std::string, float > data )

@@ -611,25 +584,17 @@

void AerialLiDARcloud::addHitPoint ( - const uint  - scanID, + const uint scanID, - const helios::vec3  - hit_xyz, + const helios::vec3 hit_xyz, - const helios::vec3  - ray_origin  - - - - ) - + const helios::vec3 ray_origin )

@@ -657,19 +622,12 @@

void AerialLiDARcloud::addHitsToVisualizer ( - Visualizer *  - visualizer, + Visualizer * visualizer, - const uint  - pointsize  - - - - ) - const + const uint pointsize ) const

@@ -696,25 +654,17 @@

void AerialLiDARcloud::addHitsToVisualizer ( - Visualizer *  - visualizer, + Visualizer * visualizer, - const uint  - pointsize, + const uint pointsize, - const char *  - color_value  - - - - ) - const + const char * color_value ) const

@@ -742,8 +692,7 @@

void AerialLiDARcloud::addScan ( - const AerialScanMetadata  - newscan) + const AerialScanMetadata newscan) @@ -770,8 +719,7 @@

void AerialLiDARcloud::calculateCoverFraction ( - void  - ) + void ) @@ -790,8 +738,7 @@

void AerialLiDARcloud::calculateHitGridCell ( - void  - ) + void ) @@ -813,8 +760,7 @@

void AerialLiDARcloud::calculateLeafAreaGPU ( - const float  - Gtheta) + const float Gtheta) @@ -841,19 +787,12 @@

void AerialLiDARcloud::calculateLeafAreaGPU ( - const float  - Gtheta, + const float Gtheta, - const int  - minVoxelHits  - - - - ) - + const int minVoxelHits )

@@ -880,8 +819,7 @@

void AerialLiDARcloud::calculateSyntheticLeafArea ( - helios::Context *  - context) + helios::Context * context) @@ -908,8 +846,7 @@

void AerialLiDARcloud::coordinateShift ( - const helios::vec3  - shift) + const helios::vec3 shift) @@ -928,8 +865,7 @@

void AerialLiDARcloud::deleteHitPoint ( - const uint  - index) + const uint index) @@ -956,8 +892,7 @@

void AerialLiDARcloud::disableMessages ( - void  - ) + void ) @@ -978,8 +913,7 @@

void AerialLiDARcloud::distanceFilter ( - const float  - maxdistance) + const float maxdistance) @@ -1004,19 +938,12 @@

bool AerialLiDARcloud::doesHitDataExist ( - const uint  - index, + const uint index, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -1043,8 +970,7 @@

void AerialLiDARcloud::enableMessages ( - void  - ) + void ) @@ -1065,8 +991,7 @@

void AerialLiDARcloud::exportPointCloud ( - const char *  - filename) + const char * filename) @@ -1091,37 +1016,27 @@

void AerialLiDARcloud::generateHeightModel ( - const int  - maxIter, + const int maxIter, - const float  - threshDist_ground, + const float threshDist_ground, - const float  - inlierRatio_ground, + const float inlierRatio_ground, - const float  - threshDist_vegetation, + const float threshDist_vegetation, - const float  - inlierRatio_vegetation  - - - - ) - + const float inlierRatio_vegetation )

@@ -1151,8 +1066,7 @@

helios::vec3 AerialLiDARcloud::getCellCenter ( - const helios::int3  - ijk) + const helios::int3 ijk) const @@ -1179,8 +1093,7 @@

float AerialLiDARcloud::getCellCoverFraction ( - const helios::int2  - ij) + const helios::int2 ij) const @@ -1208,8 +1121,7 @@

float AerialLiDARcloud::getCellGroundHeight ( - const helios::int2  - ij) + const helios::int2 ij) const @@ -1237,8 +1149,7 @@

float AerialLiDARcloud::getCellLeafArea ( - const helios::int3  - ijk) + const helios::int3 ijk) const @@ -1265,8 +1176,7 @@

float AerialLiDARcloud::getCellLeafAreaDensity ( - const helios::int3  - ijk) + const helios::int3 ijk) const @@ -1293,8 +1203,7 @@

float AerialLiDARcloud::getCellMaximumHitHeight ( - const helios::int2  - ij) + const helios::int2 ij) const @@ -1322,8 +1231,7 @@

float AerialLiDARcloud::getCellRbar ( - const helios::int3  - ijk) + const helios::int3 ijk) const @@ -1350,8 +1258,7 @@

vec3 AerialLiDARcloud::getCellSize ( - void  - ) + void ) const @@ -1372,25 +1279,17 @@

void AerialLiDARcloud::getCellTransmissionProbability ( - const helios::int3  - ijk, + const helios::int3 ijk, - int &  - P_denom, + int & P_denom, - int &  - P_trans  - - - - ) - const + int & P_trans ) const

@@ -1418,8 +1317,7 @@

float AerialLiDARcloud::getCellVegetationHeight ( - const helios::int2  - ij) + const helios::int2 ij) const @@ -1447,8 +1345,7 @@

helios::vec3 AerialLiDARcloud::getGridCenter ( - void  - ) + void ) const @@ -1469,8 +1366,7 @@

helios::vec3 AerialLiDARcloud::getGridExtent ( - void  - ) + void ) const @@ -1491,8 +1387,7 @@

helios::int3 AerialLiDARcloud::getGridResolution ( - void  - ) + void ) const @@ -1513,8 +1408,7 @@

float AerialLiDARcloud::getGridRotation ( - void  - ) + void ) const @@ -1535,19 +1429,12 @@

void AerialLiDARcloud::getHitBoundingBox ( - helios::vec3 &  - boxmin, + helios::vec3 & boxmin, - helios::vec3 &  - boxmax  - - - - ) - const + helios::vec3 & boxmax ) const

@@ -1574,8 +1461,7 @@

RGBcolor AerialLiDARcloud::getHitColor ( - const uint  - index) + const uint index) const @@ -1602,8 +1488,7 @@

uint AerialLiDARcloud::getHitCount ( - void  - ) + void ) const @@ -1624,19 +1509,12 @@

float AerialLiDARcloud::getHitData ( - const uint  - index, + const uint index, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -1664,8 +1542,7 @@

helios::int3 AerialLiDARcloud::getHitGridCell ( - const uint  - index) + const uint index) const @@ -1695,8 +1572,7 @@

helios::SphericalCoord AerialLiDARcloud::getHitRaydir ( - const uint  - index) + const uint index) const @@ -1723,8 +1599,7 @@

int AerialLiDARcloud::getHitScanID ( - const uint  - index) + const uint index) const @@ -1751,8 +1626,7 @@

helios::vec3 AerialLiDARcloud::getHitXYZ ( - uint  - index) + uint index) const @@ -1779,8 +1653,7 @@

float AerialLiDARcloud::getScanBeamDivergence ( - const uint  - scanID) + const uint scanID) const @@ -1808,8 +1681,7 @@

float AerialLiDARcloud::getScanBeamExitDiameter ( - const uint  - scanID) + const uint scanID) const @@ -1837,8 +1709,7 @@

helios::vec3 AerialLiDARcloud::getScanCenter ( - const uint  - scanID) + const uint scanID) const @@ -1865,8 +1736,7 @@

float AerialLiDARcloud::getScanConeAngle ( - const uint  - scanID) + const uint scanID) const @@ -1893,8 +1763,7 @@

uint AerialLiDARcloud::getScanCount ( - void  - ) + void ) @@ -1915,8 +1784,7 @@

float AerialLiDARcloud::getScanDensity ( - const uint  - scanID) + const uint scanID) const @@ -1937,8 +1805,7 @@

helios::vec2 AerialLiDARcloud::getScanExtent ( - const uint  - scanID) + const uint scanID) const @@ -1965,8 +1832,7 @@

int AerialLiDARcloud::gridijk2index ( - const helios::int3  - ijk) + const helios::int3 ijk) const @@ -1993,8 +1859,7 @@

helios::int3 AerialLiDARcloud::gridindex2ijk ( - const int  - index) + const int index) const @@ -2021,8 +1886,7 @@

void AerialLiDARcloud::loadXML ( - const char *  - filename) + const char * filename) @@ -2049,8 +1913,7 @@

void AerialLiDARcloud::reflectanceFilter ( - const float  - minreflectance) + const float minreflectance) @@ -2076,25 +1939,17 @@

void AerialLiDARcloud::scalarFilter ( - const char *  - scalar_field, + const char * scalar_field, - const float  - threshold, + const float threshold, - const char *  - comparator  - - - - ) - + const char * comparator )

@@ -2121,8 +1976,7 @@

int AerialLiDARcloud::selfTest ( - void  - ) + void ) @@ -2143,19 +1997,12 @@

void AerialLiDARcloud::setCellCoverFraction ( - const float  - cover_fraction, + const float cover_fraction, - const helios::int2  - ij  - - - - ) - + const helios::int2 ij )

@@ -2182,19 +2029,12 @@

void AerialLiDARcloud::setCellGroundHeight ( - const float  - height, + const float height, - const helios::int2  - ij  - - - - ) - + const helios::int2 ij )

@@ -2221,19 +2061,12 @@

void AerialLiDARcloud::setCellLeafArea ( - const float  - area, + const float area, - const helios::int3  - ijk  - - - - ) - + const helios::int3 ijk )

@@ -2260,19 +2093,12 @@

void AerialLiDARcloud::setCellMaximumHitHeight ( - const float  - height, + const float height, - const helios::int2  - ij  - - - - ) - + const helios::int2 ij )

@@ -2299,19 +2125,12 @@

void AerialLiDARcloud::setCellRbar ( - const float  - r_bar, + const float r_bar, - const helios::int3  - ijk  - - - - ) - + const helios::int3 ijk )

@@ -2338,25 +2157,17 @@

void AerialLiDARcloud::setCellTransmissionProbability ( - const int  - P_denom, + const int P_denom, - const int  - P_trans, + const int P_trans, - const helios::int3  - ijk  - - - - ) - + const helios::int3 ijk )

@@ -2384,19 +2195,12 @@

void AerialLiDARcloud::setCellVegetationHeight ( - const float  - height, + const float height, - const helios::int2  - ij  - - - - ) - + const helios::int2 ij )

@@ -2423,25 +2227,17 @@

void AerialLiDARcloud::setHitData ( - const uint  - index, + const uint index, - const char *  - label, + const char * label, - const float  - value  - - - - ) - + const float value )

@@ -2468,19 +2264,12 @@

void AerialLiDARcloud::setHitGridCell ( - const uint  - index, + const uint index, - const helios::int3  - ijk  - - - - ) - + const helios::int3 ijk )

@@ -2507,19 +2296,12 @@

void AerialLiDARcloud::syntheticScan ( - helios::Context *  - context, + helios::Context * context, - const char *  - xml_file  - - - - ) - + const char * xml_file )

@@ -2546,31 +2328,22 @@

void AerialLiDARcloud::syntheticScan ( - helios::Context *  - context, + helios::Context * context, - const char *  - xml_file, + const char * xml_file, - const int  - rays_per_pulse, + const int rays_per_pulse, - const float  - pulse_distance_threshold  - - - - ) - + const float pulse_distance_threshold )

@@ -2585,7 +2358,7 @@

Note
Calling syntheticScan() with rays_per_pulse=1 will effectively run a discrete return synthetic scan.
+
Note
Calling syntheticScan() with rays_per_pulse=1 will effectively run a discrete return synthetic scan.

Definition at line 629 of file AerialLiDAR.cu.

@@ -2600,7 +2373,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_b_l_conductance_model.html b/doc/html/class_b_l_conductance_model.html index 6e905b37b..8a46d3dbb 100644 --- a/doc/html/class_b_l_conductance_model.html +++ b/doc/html/class_b_l_conductance_model.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -92,37 +104,37 @@

Boundary-layer conductance model class. - More...

+ More...

#include <BoundaryLayerConductanceModel.h>

- + - + - + - + - + - + - + - + - +

Public Member Functions

 BLConductanceModel (helios::Context *context)
 BLConductanceModel (helios::Context *context)
 Constructor.
 
int selfTest ()
int selfTest ()
 Self-test.
 
void enableMessages ()
void enableMessages ()
 Enable standard output from this plug-in (default)
 
void disableMessages ()
void disableMessages ()
 Disable standard output from this plug-in.
 
void setBoundaryLayerModel (const char *gH_model)
void setBoundaryLayerModel (const char *gH_model)
 Set the boundary-layer conductance model to be used for all primitives in the Context.
 
void setBoundaryLayerModel (uint UUID, const char *gH_model)
void setBoundaryLayerModel (uint UUID, const char *gH_model)
 Set the boundary-layer conductance model to be used for a set of primitives.
 
void setBoundaryLayerModel (const std::vector< uint > &UUIDs, const char *gH_model)
void setBoundaryLayerModel (const std::vector< uint > &UUIDs, const char *gH_model)
 Set the boundary-layer conductance model to be used for a set of primitives.
 
void run ()
void run ()
 Run boundary-layer conductance calculations for all primitives in the Context.
 
void run (const std::vector< uint > &UUIDs)
void run (const std::vector< uint > &UUIDs)
 Run boundary-layer conductance calculations for a subset of primitives in the Context based on a vector of UUIDs.
 
@@ -141,8 +153,7 @@

BLConductanceModel::BLConductanceModel ( - helios::Context *  - context) + helios::Context * context) @@ -170,7 +181,7 @@

void BLConductanceModel::disableMessages ( - ) + ) @@ -191,7 +202,7 @@

void BLConductanceModel::enableMessages ( - ) + ) @@ -212,8 +223,7 @@

void BLConductanceModel::run ( - void  - ) + void ) @@ -234,8 +244,7 @@

void BLConductanceModel::run ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -256,7 +265,7 @@

int BLConductanceModel::selfTest ( - ) + ) @@ -278,8 +287,7 @@

void BLConductanceModel::setBoundaryLayerModel ( - const char *  - gH_model) + const char * gH_model) @@ -306,19 +314,12 @@

void BLConductanceModel::setBoundaryLayerModel ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - gH_model  - - - - ) - + const char * gH_model )

@@ -345,19 +346,12 @@

void BLConductanceModel::setBoundaryLayerModel ( - uint  - UUID, + uint UUID, - const char *  - gH_model  - - - - ) - + const char * gH_model )

@@ -382,7 +376,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_canopy_generator.html b/doc/html/class_canopy_generator.html index ebba6319b..02c45916b 100644 --- a/doc/html/class_canopy_generator.html +++ b/doc/html/class_canopy_generator.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,154 +105,154 @@ - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 CanopyGenerator (helios::Context *context)
 CanopyGenerator (helios::Context *context)
 Canopy geometry generator constructor.
 
int selfTest ()
int selfTest ()
 Unit testing routine.
 
template<typename CanopyType , typename... Args>
void storeCanopyParameters (Args &&... args)
template<typename CanopyType , typename... Args>
void storeCanopyParameters (Args &&... args)
 Stores the given canopy parameters.
 
std::vector< std::shared_ptr< BaseCanopyParameters > > getCanopyParametersList ()
std::vector< std::shared_ptr< BaseCanopyParameters > > getCanopyParametersList ()
 
void loadXML (const char *filename, bool build=true)
void loadXML (const char *filename, bool build=true)
 Reads the XML file of the given name and stores all the configured canopy parameters.
 
void buildCanopies ()
void buildCanopies ()
 Builds canopies for all the stored canopy parameters.
 
void buildCanopy (const HomogeneousCanopyParameters &params)
void buildCanopy (const HomogeneousCanopyParameters &params)
 Build a canopy consisting of a homogeneous volume of leaves.
 
void buildCanopy (const SphericalCrownsCanopyParameters &params)
void buildCanopy (const SphericalCrownsCanopyParameters &params)
 Build a canopy consisting of spherical crowns filled with homogeneous leaves.
 
void buildCanopy (const ConicalCrownsCanopyParameters &params)
void buildCanopy (const ConicalCrownsCanopyParameters &params)
 Build a canopy consisting of conical crowns filled with homogeneous leaves.
 
void buildCanopy (const VSPGrapevineParameters &params)
void buildCanopy (const VSPGrapevineParameters &params)
 Build a canopy consisting of grapevines on VSP trellis.
 
void buildCanopy (const SplitGrapevineParameters &params)
void buildCanopy (const SplitGrapevineParameters &params)
 Build a canopy consisting of grapevines on split trellis.
 
void buildCanopy (const UnilateralGrapevineParameters &params)
void buildCanopy (const UnilateralGrapevineParameters &params)
 Build a canopy consisting of grapevines on unilateral trellis.
 
void buildCanopy (const GobletGrapevineParameters &params)
void buildCanopy (const GobletGrapevineParameters &params)
 Build a canopy consisting of grapevines on Goblet trellis.
 
void buildCanopy (const WhiteSpruceCanopyParameters &params)
void buildCanopy (const WhiteSpruceCanopyParameters &params)
 Build a canopy consisting of white spruce trees.
 
void buildCanopy (const TomatoParameters &params)
void buildCanopy (const TomatoParameters &params)
 Build a canopy consisting of tomato plants.
 
void buildCanopy (const StrawberryParameters &params)
void buildCanopy (const StrawberryParameters &params)
 Build a canopy consisting of strawberry plants.
 
void buildCanopy (const WalnutCanopyParameters &params)
void buildCanopy (const WalnutCanopyParameters &params)
 Build a canopy consisting of walnut trees.
 
void buildCanopy (const SorghumCanopyParameters &params)
void buildCanopy (const SorghumCanopyParameters &params)
 Build a canopy consisting of sorghum plants.
 
void buildCanopy (const BeanParameters &params)
void buildCanopy (const BeanParameters &params)
 Build a canopy consisting of common bean plants.
 
void buildGround (const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file)
void buildGround (const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file)
 Build a ground consisting of texture sub-tiles and sub-patches, which can be different sizes.
 
void buildGround (const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file, float ground_rotation)
void buildGround (const helios::vec3 &ground_origin, const helios::vec2 &ground_extent, const helios::int2 &texture_subtiles, const helios::int2 &texture_subpatches, const char *ground_texture_file, float ground_rotation)
 Build a ground with azimuthal rotation consisting of texture sub-tiles and sub-patches, which can be different sizes.
 
std::vector< uint > getTrunkUUIDs (uint PlantID)
std::vector< uint > getTrunkUUIDs (uint PlantID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the plant trunk.
 
std::vector< uint > getTrunkUUIDs ()
std::vector< uint > getTrunkUUIDs ()
 Get the unique universal identifiers (UUIDs) for all trunk primitives in a single 1D vector.
 
std::vector< uint > getBranchUUIDs (uint PlantID)
std::vector< uint > getBranchUUIDs (uint PlantID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the plant branches.
 
std::vector< uint > getBranchUUIDs ()
std::vector< uint > getBranchUUIDs ()
 Get the unique universal identifiers (UUIDs) for all branch primitives in a single 1D vector.
 
std::vector< std::vector< uint > > getLeafUUIDs (uint PlantID)
std::vector< std::vector< uint > > getLeafUUIDs (uint PlantID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the plant leaves.
 
std::vector< uint > getLeafUUIDs ()
std::vector< uint > getLeafUUIDs ()
 Get the unique universal identifiers (UUIDs) for all leaf primitives in a single 1D vector.
 
std::vector< std::vector< std::vector< uint > > > getFruitUUIDs (uint PlantID)
std::vector< std::vector< std::vector< uint > > > getFruitUUIDs (uint PlantID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the tree fruit.
 
std::vector< uint > getFruitUUIDs ()
std::vector< uint > getFruitUUIDs ()
 Get the unique universal identifiers (UUIDs) for all fruit primitives in a single 1D vector.
 
std::vector< uint > getGroundUUIDs ()
std::vector< uint > getGroundUUIDs ()
 Get the unique universal identifiers (UUIDs) for the primitives that make up the ground.
 
std::vector< uint > getAllUUIDs (uint PlantID)
std::vector< uint > getAllUUIDs (uint PlantID)
 Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
 
uint getPlantCount ()
uint getPlantCount ()
 Get the current number of plants added to the Canopy Generator.
 
void seedRandomGenerator (uint seed)
void seedRandomGenerator (uint seed)
 Seed the random number generator. This can be useful for generating repeatable trees, say, within a loop.
 
void disableMessages ()
void disableMessages ()
 Disable standard messages from being printed to screen (default is to enable messages)
 
void enableMessages ()
void enableMessages ()
 Enable standard messages to be printed to screen (default is to enable messages)
 
void buildIndividualPlants (helios::vec3 position)
void buildIndividualPlants (helios::vec3 position)
 Builds individual plants based on the stored canopy parameters, at the given position.
 
void buildIndividualPlants ()
void buildIndividualPlants ()
 Builds individual plants based on the stored canopy parameters (using canopy_origin as the position)
 
std::vector< std::vector< uint > > addGrapeCluster (helios::vec3 position, float grape_rad, float cluster_rad, helios::RGBcolor grape_color, uint grape_subdiv)
std::vector< std::vector< uint > > addGrapeCluster (helios::vec3 position, float grape_rad, float cluster_rad, helios::RGBcolor grape_color, uint grape_subdiv)
 Function to add an individual grape berry cluster.
 
uint grapevineVSP (const VSPGrapevineParameters &params, const helios::vec3 &origin)
uint grapevineVSP (const VSPGrapevineParameters &params, const helios::vec3 &origin)
 Function to add an individual grapevine plant on a vertical shoot positioned (VSP) trellis.
 
uint grapevineSplit (const SplitGrapevineParameters &params, const helios::vec3 &origin)
uint grapevineSplit (const SplitGrapevineParameters &params, const helios::vec3 &origin)
 Function to add an individual grapevine plant on a split trellis.
 
uint grapevineUnilateral (const UnilateralGrapevineParameters &params, const helios::vec3 &origin)
uint grapevineUnilateral (const UnilateralGrapevineParameters &params, const helios::vec3 &origin)
 Function to add an individual grapevine plant on a unilateral trellis.
 
uint grapevineGoblet (const GobletGrapevineParameters &params, const helios::vec3 &origin)
uint grapevineGoblet (const GobletGrapevineParameters &params, const helios::vec3 &origin)
 Function to add an individual grapevine plant on a goblet (vent a taille) trellis.
 
uint whitespruce (const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
uint whitespruce (const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
 Function to add an individual white spruce tree.
 
uint tomato (const TomatoParameters &params, const helios::vec3 &origin)
uint tomato (const TomatoParameters &params, const helios::vec3 &origin)
 Function to add an individual tomato plant.
 
uint strawberry (const StrawberryParameters &params, const helios::vec3 &origin)
uint strawberry (const StrawberryParameters &params, const helios::vec3 &origin)
 Function to add an individual strawberry plant.
 
uint walnut (const WalnutCanopyParameters &params, const helios::vec3 &origin)
uint walnut (const WalnutCanopyParameters &params, const helios::vec3 &origin)
 Function to add an individual walnut tree.
 
uint sorghum (const SorghumCanopyParameters &params, const helios::vec3 &origin)
uint sorghum (const SorghumCanopyParameters &params, const helios::vec3 &origin)
 Function to add an individual sorghum plant.
 
uint bean (const BeanParameters &params, const helios::vec3 &origin)
uint bean (const BeanParameters &params, const helios::vec3 &origin)
 Function to add an individual bean plant.
 
void createElementLabels ()
void createElementLabels ()
 Create primitive data that explicitly labels all primitives according to the plant element they correspond to.
 
void disableElementLabels ()
void disableElementLabels ()
 Toggle off primitive data element type labels.
 
@@ -260,8 +272,7 @@

CanopyGenerator::CanopyGenerator ( - helios::Context *  - context) + helios::Context * context) @@ -294,37 +305,27 @@

std::vector< std::vector< uint > > CanopyGenerator::addGrapeCluster ( - helios::vec3  - position, + helios::vec3 position, - float  - grape_rad, + float grape_rad, - float  - cluster_rad, + float cluster_rad, - helios::RGBcolor  - grape_color, + helios::RGBcolor grape_color, - uint  - grape_subdiv  - - - - ) - + uint grape_subdiv )

@@ -354,19 +355,12 @@

uint CanopyGenerator::bean ( - const BeanParameters &  - params, + const BeanParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -394,7 +388,7 @@

void CanopyGenerator::buildCanopies ( - ) + ) @@ -415,8 +409,7 @@

void CanopyGenerator::buildCanopy ( - const BeanParameters &  - params) + const BeanParameters & params) @@ -443,8 +436,7 @@

void CanopyGenerator::buildCanopy ( - const ConicalCrownsCanopyParameters &  - params) + const ConicalCrownsCanopyParameters & params) @@ -471,8 +463,7 @@

void CanopyGenerator::buildCanopy ( - const GobletGrapevineParameters &  - params) + const GobletGrapevineParameters & params) @@ -499,8 +490,7 @@

void CanopyGenerator::buildCanopy ( - const HomogeneousCanopyParameters &  - params) + const HomogeneousCanopyParameters & params) @@ -527,8 +517,7 @@

void CanopyGenerator::buildCanopy ( - const SorghumCanopyParameters &  - params) + const SorghumCanopyParameters & params) @@ -555,8 +544,7 @@

void CanopyGenerator::buildCanopy ( - const SphericalCrownsCanopyParameters &  - params) + const SphericalCrownsCanopyParameters & params) @@ -583,8 +571,7 @@

void CanopyGenerator::buildCanopy ( - const SplitGrapevineParameters &  - params) + const SplitGrapevineParameters & params) @@ -611,8 +598,7 @@

void CanopyGenerator::buildCanopy ( - const StrawberryParameters &  - params) + const StrawberryParameters & params) @@ -639,8 +625,7 @@

void CanopyGenerator::buildCanopy ( - const TomatoParameters &  - params) + const TomatoParameters & params) @@ -667,8 +652,7 @@

void CanopyGenerator::buildCanopy ( - const UnilateralGrapevineParameters &  - params) + const UnilateralGrapevineParameters & params) @@ -695,8 +679,7 @@

void CanopyGenerator::buildCanopy ( - const VSPGrapevineParameters &  - params) + const VSPGrapevineParameters & params) @@ -723,8 +706,7 @@

void CanopyGenerator::buildCanopy ( - const WalnutCanopyParameters &  - params) + const WalnutCanopyParameters & params) @@ -751,8 +733,7 @@

void CanopyGenerator::buildCanopy ( - const WhiteSpruceCanopyParameters &  - params) + const WhiteSpruceCanopyParameters & params) @@ -779,37 +760,27 @@

void CanopyGenerator::buildGround ( - const helios::vec3 &  - ground_origin, + const helios::vec3 & ground_origin, - const helios::vec2 &  - ground_extent, + const helios::vec2 & ground_extent, - const helios::int2 &  - texture_subtiles, + const helios::int2 & texture_subtiles, - const helios::int2 &  - texture_subpatches, + const helios::int2 & texture_subpatches, - const char *  - ground_texture_file  - - - - ) - + const char * ground_texture_file )

@@ -839,43 +810,32 @@

void CanopyGenerator::buildGround ( - const helios::vec3 &  - ground_origin, + const helios::vec3 & ground_origin, - const helios::vec2 &  - ground_extent, + const helios::vec2 & ground_extent, - const helios::int2 &  - texture_subtiles, + const helios::int2 & texture_subtiles, - const helios::int2 &  - texture_subpatches, + const helios::int2 & texture_subpatches, - const char *  - ground_texture_file, + const char * ground_texture_file, - float  - ground_rotation  - - - - ) - + float ground_rotation )

@@ -906,7 +866,7 @@

void CanopyGenerator::buildIndividualPlants ( - ) + ) @@ -927,8 +887,7 @@

void CanopyGenerator::buildIndividualPlants ( - helios::vec3  - position) + helios::vec3 position) @@ -950,7 +909,7 @@

void CanopyGenerator::createElementLabels ( - ) + ) @@ -971,7 +930,7 @@

void CanopyGenerator::disableElementLabels ( - ) + ) @@ -992,7 +951,7 @@

void CanopyGenerator::disableMessages ( - ) + ) @@ -1013,7 +972,7 @@

void CanopyGenerator::enableMessages ( - ) + ) @@ -1034,8 +993,7 @@

std::vector< uint > CanopyGenerator::getAllUUIDs ( - uint  - PlantID) + uint PlantID) @@ -1062,7 +1020,7 @@

std::vector< uint > CanopyGenerator::getBranchUUIDs ( - ) + ) @@ -1083,8 +1041,7 @@

std::vector< uint > CanopyGenerator::getBranchUUIDs ( - uint  - PlantID) + uint PlantID) @@ -1111,7 +1068,7 @@

std::vector< std::shared_ptr< BaseCanopyParameters > > CanopyGenerator::getCanopyParametersList ( - ) + ) @@ -1130,7 +1087,7 @@

std::vector< uint > CanopyGenerator::getFruitUUIDs ( - ) + ) @@ -1151,8 +1108,7 @@

std::vector< std::vector< std::vector< uint > > > CanopyGenerator::getFruitUUIDs ( - uint  - PlantID) + uint PlantID) @@ -1180,7 +1136,7 @@

std::vector< uint > CanopyGenerator::getGroundUUIDs ( - ) + ) @@ -1201,7 +1157,7 @@

std::vector< uint > CanopyGenerator::getLeafUUIDs ( - ) + ) @@ -1222,8 +1178,7 @@

std::vector< std::vector< uint > > CanopyGenerator::getLeafUUIDs ( - uint  - PlantID) + uint PlantID) @@ -1251,7 +1206,7 @@

uint CanopyGenerator::getPlantCount ( - ) + ) @@ -1272,7 +1227,7 @@

std::vector< uint > CanopyGenerator::getTrunkUUIDs ( - ) + ) @@ -1293,8 +1248,7 @@

std::vector< uint > CanopyGenerator::getTrunkUUIDs ( - uint  - PlantID) + uint PlantID) @@ -1321,19 +1275,12 @@

uint CanopyGenerator::grapevineGoblet ( - const GobletGrapevineParameters &  - params, + const GobletGrapevineParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1361,19 +1308,12 @@

uint CanopyGenerator::grapevineSplit ( - const SplitGrapevineParameters &  - params, + const SplitGrapevineParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1401,19 +1341,12 @@

uint CanopyGenerator::grapevineUnilateral ( - const UnilateralGrapevineParameters &  - params, + const UnilateralGrapevineParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1441,19 +1374,12 @@

uint CanopyGenerator::grapevineVSP ( - const VSPGrapevineParameters &  - params, + const VSPGrapevineParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1481,19 +1407,12 @@

void CanopyGenerator::loadXML ( - const char *  - filename, + const char * filename, - bool  - build = true  - - - - ) - + bool build = true )

@@ -1520,8 +1439,7 @@

void CanopyGenerator::seedRandomGenerator ( - uint  - seed) + uint seed) @@ -1548,7 +1466,7 @@

int CanopyGenerator::selfTest ( - ) + ) @@ -1569,19 +1487,12 @@

uint CanopyGenerator::sorghum ( - const SorghumCanopyParameters &  - params, + const SorghumCanopyParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1611,8 +1522,7 @@

void CanopyGenerator::storeCanopyParameters ( - Args &&...  - args) + Args &&... args) @@ -1633,19 +1543,12 @@

uint CanopyGenerator::strawberry ( - const StrawberryParameters &  - params, + const StrawberryParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1673,19 +1576,12 @@

uint CanopyGenerator::tomato ( - const TomatoParameters &  - params, + const TomatoParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1713,19 +1609,12 @@

uint CanopyGenerator::walnut ( - const WalnutCanopyParameters &  - params, + const WalnutCanopyParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1753,19 +1642,12 @@

uint CanopyGenerator::whitespruce ( - const WhiteSpruceCanopyParameters &  - params, + const WhiteSpruceCanopyParameters & params, - const helios::vec3 &  - origin  - - - - ) - + const helios::vec3 & origin )

@@ -1798,7 +1680,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_dummy_model.html b/doc/html/class_dummy_model.html index d6a836f6c..e51b83989 100644 --- a/doc/html/class_dummy_model.html +++ b/doc/html/class_dummy_model.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -92,16 +104,16 @@

Dummy model class. - More...

+ More...

#include <DummyModel.h>

- + - +

Public Member Functions

 DummyModel (helios::Context *context)
 DummyModel (helios::Context *context)
 Constructor.
 
void run (void)
void run (void)
 Function to run the dummy model.
 
@@ -120,8 +132,7 @@

DummyModel::DummyModel ( - helios::Context *  - context) + helios::Context * context) @@ -143,8 +154,7 @@

void DummyModel::run ( - void  - ) + void ) @@ -163,7 +173,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_energy_balance_model.html b/doc/html/class_energy_balance_model.html index a50dd924a..aece19f25 100644 --- a/doc/html/class_energy_balance_model.html +++ b/doc/html/class_energy_balance_model.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -92,49 +104,49 @@

Energy balance model class. - More...

+ More...

#include <EnergyBalanceModel.h>

- + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 EnergyBalanceModel (helios::Context *context)
 EnergyBalanceModel (helios::Context *context)
 Constructor.
 
int selfTest ()
int selfTest ()
 Self-test.
 
void enableMessages ()
void enableMessages ()
 Enable standard output from this plug-in (default)
 
void disableMessages ()
void disableMessages ()
 Disable standard output from this plug-in.
 
void run ()
void run ()
 Function to run the energy balance model for all primitives in the Context.
 
void run (float dt)
void run (float dt)
 Function to run the dynamic /non steady state energy balance model for one timestep of length "dt" seconds.
 
void run (const std::vector< uint > &UUIDs)
void run (const std::vector< uint > &UUIDs)
 Function to run the energy balance model for a select set of primitives.
 
void run (const std::vector< uint > &UUIDs, float dt)
void run (const std::vector< uint > &UUIDs, float dt)
 Function to run the energy balance model for a select set of primitives for one timestep of length "dt" seconds.
 
void addRadiationBand (const char *band)
void addRadiationBand (const char *band)
 Add the label of a radiation band in the RadiationModel plug-in that should be used in calculation of the absorbed all-wave radiation flux.
 
void addRadiationBand (const std::vector< std::string > &bands)
void addRadiationBand (const std::vector< std::string > &bands)
 Add the labels of radiation bands in the RadiationModel plug-in that should be used in calculation of the absorbed all-wave radiation flux.
 
void optionalOutputPrimitiveData (const char *label)
void optionalOutputPrimitiveData (const char *label)
 Add optional output primitive data values to the Context.
 
void printDefaultValueReport () const
void printDefaultValueReport () const
 Print a report detailing usage of default input values for all primitives in the Context.
 
void printDefaultValueReport (const std::vector< uint > &UUIDs) const
void printDefaultValueReport (const std::vector< uint > &UUIDs) const
 Print a report detailing usage of default input values based on a subset of primitive UUIDs.
 
@@ -153,8 +165,7 @@

EnergyBalanceModel::EnergyBalanceModel ( - helios::Context *  - context) + helios::Context * context) @@ -182,8 +193,7 @@

void EnergyBalanceModel::addRadiationBand ( - const char *  - band) + const char * band) @@ -210,8 +220,7 @@

void EnergyBalanceModel::addRadiationBand ( - const std::vector< std::string > &  - bands) + const std::vector< std::string > & bands) @@ -238,7 +247,7 @@

void EnergyBalanceModel::disableMessages ( - ) + ) @@ -259,7 +268,7 @@

void EnergyBalanceModel::enableMessages ( - ) + ) @@ -280,8 +289,7 @@

void EnergyBalanceModel::optionalOutputPrimitiveData ( - const char *  - label) + const char * label) @@ -308,7 +316,7 @@

void EnergyBalanceModel::printDefaultValueReport ( - ) + ) const @@ -329,8 +337,7 @@

void EnergyBalanceModel::printDefaultValueReport ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) const @@ -352,8 +359,7 @@

void EnergyBalanceModel::run ( - void  - ) + void ) @@ -374,8 +380,7 @@

void EnergyBalanceModel::run ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -402,19 +407,12 @@

void EnergyBalanceModel::run ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - float  - dt  - - - - ) - + float dt )

@@ -441,8 +439,7 @@

void EnergyBalanceModel::run ( - float  - dt) + float dt) @@ -469,7 +466,7 @@

int EnergyBalanceModel::selfTest ( - ) + ) @@ -490,7 +487,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_glyph.html b/doc/html/class_glyph.html index 7a16e1d44..9977e6ac5 100644 --- a/doc/html/class_glyph.html +++ b/doc/html/class_glyph.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -93,31 +105,31 @@

Glyph object - 2D matrix shape. - More...

+ More...

#include <Visualizer.h>

-

Public Member Functions

+
void readFile (const char *glyphfile)
 
- + - + - + - +

Data Fields

helios::int2 size
helios::int2 size
 
std::vector< std::vector< uint > > data
std::vector< std::vector< uint > > data
 
float solidFraction
float solidFraction
 
char * filename
char * filename
 

Detailed Description

Glyph object - 2D matrix shape.

-

Definition at line 67 of file Visualizer.h.

+

Definition at line 77 of file Visualizer.h.

Field Documentation

◆ data

@@ -131,7 +143,7 @@

-

Definition at line 71 of file Visualizer.h.

+

Definition at line 81 of file Visualizer.h.

@@ -147,7 +159,7 @@

-

Definition at line 73 of file Visualizer.h.

+

Definition at line 83 of file Visualizer.h.

@@ -163,7 +175,7 @@

-

Definition at line 70 of file Visualizer.h.

+

Definition at line 80 of file Visualizer.h.

@@ -179,7 +191,7 @@

-

Definition at line 72 of file Visualizer.h.

+

Definition at line 82 of file Visualizer.h.

@@ -189,7 +201,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_hit_table.html b/doc/html/class_hit_table.html index 7e746c991..399db71f5 100644 --- a/doc/html/class_hit_table.html +++ b/doc/html/class_hit_table.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -94,22 +106,22 @@ - + - + - + - + - +

Public Member Functions

 HitTable (const int nx, const int ny)
 HitTable (const int nx, const int ny)
 
 HitTable (const int nx, const int ny, const datatype initval)
 HitTable (const int nx, const int ny, const datatype initval)
 
datatype get (const int i, const int j) const
datatype get (const int i, const int j) const
 
void set (const int i, const int j, const datatype value)
void set (const int i, const int j, const datatype value)
 
void resize (const int nx, const int ny, const datatype initval)
void resize (const int nx, const int ny, const datatype initval)
 
- + - +

Data Fields

uint Ntheta
uint Ntheta
 
uint Nphi
uint Nphi
 

Detailed Description

@@ -131,8 +143,7 @@

HitTable< datatype >::HitTable ( - void  - ) + void ) @@ -161,19 +172,12 @@

HitTable< datatype >::HitTable ( - const int  - nx, + const int nx, - const int  - ny  - - - - ) - + const int ny ) @@ -201,25 +205,17 @@

HitTable< datatype >::HitTable ( - const int  - nx, + const int nx, - const int  - ny, + const int ny, - const datatype  - initval  - - - - ) - + const datatype initval ) @@ -248,19 +244,12 @@

datatype HitTable< datatype >::get ( - const int  - i, + const int i, - const int  - j  - - - - ) - const + const int j ) const @@ -288,25 +277,17 @@

void HitTable< datatype >::resize ( - const int  - nx, + const int nx, - const int  - ny, + const int ny, - const datatype  - initval  - - - - ) - + const datatype initval ) @@ -334,25 +315,17 @@

void HitTable< datatype >::set ( - const int  - i, + const int i, - const int  - j, + const int j, - const datatype  - value  - - - - ) - + const datatype value ) @@ -409,7 +382,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_leaf_optics.html b/doc/html/class_leaf_optics.html index 7ec647266..d727786cd 100644 --- a/doc/html/class_leaf_optics.html +++ b/doc/html/class_leaf_optics.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -94,34 +106,34 @@ - + - + - + - + - + - + - + - +

Public Member Functions

 LeafOptics (helios::Context *a_context)
 LeafOptics (helios::Context *a_context)
 Constructor.
 
void run (const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties, const std::string &label)
void run (const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties, const std::string &label)
 Run the LeafOptics model to generate reflectivity and transmissivity spectra, create associated global data, and assign to specified primitives.
 
void run (const LeafOpticsProperties &leafproperties, const std::string &label)
void run (const LeafOpticsProperties &leafproperties, const std::string &label)
 Run the LeafOptics model to generate reflectivity and transmissivity spectra and create associated global data.
 
void PROSPECT (float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments, float watermass, float drymass, float protein, float carbonconstituents, std::vector< float > &reflectivities_fit, std::vector< float > &transmissivities_fit)
void PROSPECT (float numberlayers, float Chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float brownpigments, float watermass, float drymass, float protein, float carbonconstituents, std::vector< float > &reflectivities_fit, std::vector< float > &transmissivities_fit)
 LeafOptics model kernel.
 
void getLeafSpectra (const LeafOpticsProperties &leafproperties, std::vector< helios::vec2 > &reflectivities_fit, std::vector< helios::vec2 > &transmissivities_fit)
void getLeafSpectra (const LeafOpticsProperties &leafproperties, std::vector< helios::vec2 > &reflectivities_fit, std::vector< helios::vec2 > &transmissivities_fit)
 Get the leaf spectra.
 
void setProperties (const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties)
void setProperties (const std::vector< uint > &UUIDs, const LeafOpticsProperties &leafproperties)
 Set leaf optical properties for a set of primitives.
 
void disableMessages ()
void disableMessages ()
 Disable command-line output messages from this plug-in.
 
void enableMessages ()
void enableMessages ()
 Enable command-line output messages from this plug-in.
 
- +

Static Public Member Functions

static int selfTest ()
static int selfTest ()
 Self-test.
 
@@ -138,8 +150,7 @@

LeafOptics::LeafOptics ( - helios::Context *  - a_context) + helios::Context * a_context) @@ -161,7 +172,7 @@

void LeafOptics::disableMessages ( - ) + ) @@ -182,7 +193,7 @@

void LeafOptics::enableMessages ( - ) + ) @@ -203,25 +214,17 @@

void LeafOptics::getLeafSpectra ( - const LeafOpticsProperties &  - leafproperties, + const LeafOpticsProperties & leafproperties, - std::vector< helios::vec2 > &  - reflectivities_fit, + std::vector< helios::vec2 > & reflectivities_fit, - std::vector< helios::vec2 > &  - transmissivities_fit  - - - - ) - + std::vector< helios::vec2 > & transmissivities_fit )

@@ -249,73 +252,57 @@

void LeafOptics::PROSPECT ( - float  - numberlayers, + float numberlayers, - float  - Chlorophyllcontent, + float Chlorophyllcontent, - float  - carotenoidcontent, + float carotenoidcontent, - float  - anthocyancontent, + float anthocyancontent, - float  - brownpigments, + float brownpigments, - float  - watermass, + float watermass, - float  - drymass, + float drymass, - float  - protein, + float protein, - float  - carbonconstituents, + float carbonconstituents, - std::vector< float > &  - reflectivities_fit, + std::vector< float > & reflectivities_fit, - std::vector< float > &  - transmissivities_fit  - - - - ) - + std::vector< float > & transmissivities_fit )

@@ -349,19 +336,12 @@

void LeafOptics::run ( - const LeafOpticsProperties &  - leafproperties, + const LeafOpticsProperties & leafproperties, - const std::string &  - label  - - - - ) - + const std::string & label )

@@ -388,25 +368,17 @@

void LeafOptics::run ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const LeafOpticsProperties &  - leafproperties, + const LeafOpticsProperties & leafproperties, - const std::string &  - label  - - - - ) - + const std::string & label )

@@ -437,7 +409,7 @@

int LeafOptics::selfTest ( - ) + ) @@ -464,19 +436,12 @@

void LeafOptics::setProperties ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const LeafOpticsProperties &  - leafproperties  - - - - ) - + const LeafOpticsProperties & leafproperties )

@@ -501,7 +466,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_li_d_a_rcloud.html b/doc/html/class_li_d_a_rcloud.html index 64e61f6d9..554b36c58 100644 --- a/doc/html/class_li_d_a_rcloud.html +++ b/doc/html/class_li_d_a_rcloud.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -92,353 +104,353 @@

Primary class for terrestrial LiDAR scan. - More...

+ More...

#include <LiDAR.h>

- + - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 LiDARcloud ()
 LiDARcloud ()
 LiDAR point cloud constructor.
 
+
 ~LiDARcloud ()
 LiDAR point cloud destructor.
 
int selfTest ()
int selfTest ()
 Self-test (unit test) function.
 
void validateRayDirections ()
void validateRayDirections ()
 
void disableMessages ()
void disableMessages ()
 Disable all print messages to the screen except for fatal error messages.
 
void enableMessages ()
void enableMessages ()
 Enable all print messages to the screen.
 
uint getScanCount ()
uint getScanCount ()
 Get number of scans in point cloud.
 
uint addScan (ScanMetadata &newscan)
uint addScan (ScanMetadata &newscan)
 Add a LiDAR scan to the point cloud.
 
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
 Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
 
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const helios::RGBcolor &color)
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const helios::RGBcolor &color)
 Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
 
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const std::map< std::string, double > &data)
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const std::map< std::string, double > &data)
 Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
 
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const helios::RGBcolor &color, const std::map< std::string, double > &data)
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction, const helios::RGBcolor &color, const std::map< std::string, double > &data)
 Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
 
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::int2 &row_column, const helios::RGBcolor &color, const std::map< std::string, double > &data)
void addHitPoint (uint scanID, const helios::vec3 &xyz, const helios::int2 &row_column, const helios::RGBcolor &color, const std::map< std::string, double > &data)
 Specify a scan point as a hit by providing the (x,y,z) coordinates and row,column in scan table.
 
void deleteHitPoint (uint index)
void deleteHitPoint (uint index)
 Delete a hit point in the scan.
 
uint getHitCount () const
uint getHitCount () const
 Get the number of hit points in the point cloud.
 
helios::vec3 getScanOrigin (uint scanID) const
helios::vec3 getScanOrigin (uint scanID) const
 Get the (x,y,z) scan origin.
 
uint getScanSizeTheta (uint scanID) const
uint getScanSizeTheta (uint scanID) const
 Get the number of scan points in the theta (zenithal) direction.
 
uint getScanSizePhi (uint scanID) const
uint getScanSizePhi (uint scanID) const
 Get the number of scan points in the phi (azimuthal) direction.
 
helios::vec2 getScanRangeTheta (uint scanID) const
helios::vec2 getScanRangeTheta (uint scanID) const
 Get the range of scan directions in the theta (zenithal) direction.
 
helios::vec2 getScanRangePhi (uint scanID) const
helios::vec2 getScanRangePhi (uint scanID) const
 Get the range of scan directions in the phi (azimuthal) direction.
 
float getScanBeamExitDiameter (uint scanID) const
float getScanBeamExitDiameter (uint scanID) const
 Get the diameter of the laser beam at exit from the instrument.
 
std::vector< std::string > getScanColumnFormat (uint scanID) const
std::vector< std::string > getScanColumnFormat (uint scanID) const
 Get the labels for columns in ASCII input/output file.
 
float getScanBeamDivergence (uint scanID) const
float getScanBeamDivergence (uint scanID) const
 Divergence angle of the laser beam in radians.
 
helios::vec3 getHitXYZ (uint index) const
helios::vec3 getHitXYZ (uint index) const
 Get (x,y,z) coordinate of hit point by index.
 
helios::SphericalCoord getHitRaydir (uint index) const
helios::SphericalCoord getHitRaydir (uint index) const
 Get ray direction of hit point in the scan based on its index.
 
double getHitData (uint index, const char *label) const
double getHitData (uint index, const char *label) const
 Set floating point data value associated with a hit point.
 
void setHitData (uint index, const char *label, double value)
void setHitData (uint index, const char *label, double value)
 Get floating point data value associated with a hit point.
 
bool doesHitDataExist (uint index, const char *label) const
bool doesHitDataExist (uint index, const char *label) const
 Check if scalar data exists for a hit point.
 
helios::RGBcolor getHitColor (uint index) const
helios::RGBcolor getHitColor (uint index) const
 Get color of hit point.
 
int getHitScanID (uint index) const
int getHitScanID (uint index) const
 Get the scan with which a hit is associated.
 
int getHitIndex (uint scanID, uint row, uint column) const
int getHitIndex (uint scanID, uint row, uint column) const
 Get the index of a scan point based on its row and column in the hit table.
 
int getHitGridCell (uint index) const
int getHitGridCell (uint index) const
 Get the grid cell in which the hit point resides.
 
void setHitGridCell (uint index, int cell)
void setHitGridCell (uint index, int cell)
 Set the grid cell in which the hit point resides.
 
void coordinateShift (const helios::vec3 &shift)
void coordinateShift (const helios::vec3 &shift)
 Apply a translation to all points in the point cloud.
 
void coordinateShift (uint scanID, const helios::vec3 &shift)
void coordinateShift (uint scanID, const helios::vec3 &shift)
 Apply a translation to all points in a given scan.
 
void coordinateRotation (const helios::SphericalCoord &rotation)
void coordinateRotation (const helios::SphericalCoord &rotation)
 Rotate all points in the point cloud about the origin.
 
void coordinateRotation (uint scanID, const helios::SphericalCoord &rotation)
void coordinateRotation (uint scanID, const helios::SphericalCoord &rotation)
 Rotate all points in the point cloud about the origin.
 
void coordinateRotation (float rotation, const helios::vec3 &line_base, const helios::vec3 &line_direction)
void coordinateRotation (float rotation, const helios::vec3 &line_base, const helios::vec3 &line_direction)
 Rotate all points in the point cloud about an arbitrary line.
 
uint getTriangleCount () const
uint getTriangleCount () const
 Get the number of triangles formed by the triangulation.
 
Triangulation getTriangle (uint index) const
Triangulation getTriangle (uint index) const
 Get hit point corresponding to first vertex of triangle.
 
void loadXML (const char *filename)
void loadXML (const char *filename)
 Read an XML file containing scan information.
 
void loadXML (const char *filename, bool load_grid_only)
void loadXML (const char *filename, bool load_grid_only)
 Read an XML file containing scan information.
 
void exportTriangleNormals (const char *filename)
void exportTriangleNormals (const char *filename)
 Export to file the normal vectors (nx,ny,nz) for all triangles formed.
 
void exportTriangleNormals (const char *filename, int gridcell)
void exportTriangleNormals (const char *filename, int gridcell)
 Export to file the normal vectors (nx,ny,nz) for triangles formed within a single gridcell.
 
void exportTriangleAreas (const char *filename)
void exportTriangleAreas (const char *filename)
 Export to file the area of all triangles formed.
 
void exportTriangleAreas (const char *filename, int gridcell)
void exportTriangleAreas (const char *filename, int gridcell)
 Export to file the area of all triangles formed within a single grid cell.
 
void exportTriangleInclinationDistribution (const char *filename, uint Nbins)
void exportTriangleInclinationDistribution (const char *filename, uint Nbins)
 Export to file discrete area-weighted inclination angle probability distribution based on the triangulation. Inclination angles are between 0 and 90 degrees. The probability distribution is normalized such that the sine-weighted integral over all angles is 1. The value of each bin is written as a column in the output file; lines correspond to each voxel grid cell.
 
void exportLeafAreas (const char *filename)
void exportLeafAreas (const char *filename)
 Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
 
void exportLeafAreaDensities (const char *filename)
void exportLeafAreaDensities (const char *filename)
 Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid cell.
 
void exportGtheta (const char *filename)
void exportGtheta (const char *filename)
 Export to file the G(theta) value within each grid cell. Lines of the file correspond to each grid cell.
 
void exportPointCloud (const char *filename)
void exportPointCloud (const char *filename)
 Export to file all points in the point cloud to an ASCII text file following the column format specified by the <ASCII_format></ASCII_format> tag in the scan XML file.
 
void exportPointCloud (const char *filename, uint scanID)
void exportPointCloud (const char *filename, uint scanID)
 Export to file all points from a given scan to an ASCII text file following the column format specified by the <ASCII_format></ASCII_format> tag in the scan XML file.
 
void exportPointCloudPTX (const char *filename, uint scanID)
void exportPointCloudPTX (const char *filename, uint scanID)
 Export to file all points from a given scan to PTX file.
 
void addHitsToVisualizer (Visualizer *visualizer, uint pointsize) const
void addHitsToVisualizer (Visualizer *visualizer, uint pointsize) const
 Add all hit points to the visualizer plug-in, and color them by their r-g-b color.
 
void addHitsToVisualizer (Visualizer *visualizer, uint pointsize, const char *color_value) const
void addHitsToVisualizer (Visualizer *visualizer, uint pointsize, const char *color_value) const
 Add all hit points to the visualizer plug-in, and color them by a hit scalar data value.
 
void addGridToVisualizer (Visualizer *visualizer) const
void addGridToVisualizer (Visualizer *visualizer) const
 Add all grid cells to the visualizer plug-in.
 
void addGridWireFrametoVisualizer (Visualizer *visualizer) const
void addGridWireFrametoVisualizer (Visualizer *visualizer) const
 Add wire frame of the grid to the visualizer plug-in.
 
void addGrid (const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &ndiv, float rotation)
void addGrid (const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &ndiv, float rotation)
 Add a grid to point cloud instead of reading in from an xml file.
 
void addTrianglesToVisualizer (Visualizer *visualizer) const
void addTrianglesToVisualizer (Visualizer *visualizer) const
 Add all triangles to the visualizer plug-in, and color them by their r-g-b color.
 
void addTrianglesToVisualizer (Visualizer *visualizer, uint gridcell) const
void addTrianglesToVisualizer (Visualizer *visualizer, uint gridcell) const
 Add triangles within a given grid cell to the visualizer plug-in, and color them by their r-g-b color.
 
void addLeafReconstructionToVisualizer (Visualizer *visualizer) const
void addLeafReconstructionToVisualizer (Visualizer *visualizer) const
 Add reconstructed leaves (triangles or alpha masks) to the visualizer plug-in.
 
void addTrunkReconstructionToVisualizer (Visualizer *visualizer) const
void addTrunkReconstructionToVisualizer (Visualizer *visualizer) const
 Add trunk reconstruction to the visualizer plug-in. Colors reconstructed triangles by hit point color.
 
void addTrunkReconstructionToVisualizer (Visualizer *visualizer, const helios::RGBcolor &trunk_color) const
void addTrunkReconstructionToVisualizer (Visualizer *visualizer, const helios::RGBcolor &trunk_color) const
 Add trunk reconstruction to the visualizer plug-in.
 
std::vector< uint > addLeafReconstructionToContext (helios::Context *context) const
std::vector< uint > addLeafReconstructionToContext (helios::Context *context) const
 Add reconstructed leaves (texture-masked patches) to the Context.
 
std::vector< uint > addLeafReconstructionToContext (helios::Context *context, const helios::int2 &subpatches) const
std::vector< uint > addLeafReconstructionToContext (helios::Context *context, const helios::int2 &subpatches) const
 Add reconstructed leaves (texture-masked patches) to the Context with leaves divided into sub-patches (tiled)
 
std::vector< uint > addReconstructedTriangleGroupsToContext (helios::Context *context) const
std::vector< uint > addReconstructedTriangleGroupsToContext (helios::Context *context) const
 Add triangle groups used in the direct reconstruction to the Context.
 
std::vector< uint > addTrunkReconstructionToContext (helios::Context *context) const
std::vector< uint > addTrunkReconstructionToContext (helios::Context *context) const
 Add reconstructed trunk triangles to the Context.
 
void getHitBoundingBox (helios::vec3 &boxmin, helios::vec3 &boxmax) const
void getHitBoundingBox (helios::vec3 &boxmin, helios::vec3 &boxmax) const
 Form an axis-aligned bounding box for all hit points in the point cloud.
 
void getGridBoundingBox (helios::vec3 &boxmin, helios::vec3 &boxmax) const
void getGridBoundingBox (helios::vec3 &boxmin, helios::vec3 &boxmax) const
 Form an axis-aligned bounding box for all grid cells in the point cloud.
 
void distanceFilter (float maxdistance)
void distanceFilter (float maxdistance)
 Filter scan by imposing a maximum distance from the scanner.
 
void xyzFilter (float xmin, float xmax, float ymin, float ymax, float zmin, float zmax)
void xyzFilter (float xmin, float xmax, float ymin, float ymax, float zmin, float zmax)
 overloaded version of xyzFilter that defaults to deleting points outside the provided bounding box
 
void xyzFilter (float xmin, float xmax, float ymin, float ymax, float zmin, float zmax, bool deleteOutside)
void xyzFilter (float xmin, float xmax, float ymin, float ymax, float zmin, float zmax, bool deleteOutside)
 Filter scan with a bounding box.
 
void reflectanceFilter (float minreflectance)
void reflectanceFilter (float minreflectance)
 Filter scan by imposing a minimum reflectance value.
 
void scalarFilter (const char *scalar_field, float threshold, const char *comparator)
void scalarFilter (const char *scalar_field, float threshold, const char *comparator)
 Filter hit points based on a scalar field given by a column in the ASCII data.
 
void maxPulseFilter (const char *scalar)
void maxPulseFilter (const char *scalar)
 Filter full-waveform data according to the maximum scalar value along each pulse. Any scalar value can be used, provided it is a field in the hit point data file. The resulting point cloud will have only one hit point per laser pulse.
 
void minPulseFilter (const char *scalar)
void minPulseFilter (const char *scalar)
 Filter full-waveform data according to the minimum scalar value along each pulse. Any scalar value can be used, provided it is a field in the hit point data file. The resulting point cloud will have only one hit point per laser pulse.
 
void firstHitFilter ()
void firstHitFilter ()
 Filter full-waveform data to include only the first hit per laser pulse. The resulting point cloud will have only one hit point per laser pulse (first hits).
 
void lastHitFilter ()
void lastHitFilter ()
 Filter full-waveform data to include only the last hit per laser pulse. The resulting point cloud will have only one hit point per laser pulse (last hits).
 
void triangulateHitPoints (float Lmax, float max_aspect_ratio)
void triangulateHitPoints (float Lmax, float max_aspect_ratio)
 Perform triangulation on all hit points in point cloud.
 
void triangulateHitPoints (float Lmax, float max_aspect_ratio, const char *scalar_field, float threshold, const char *comparator)
void triangulateHitPoints (float Lmax, float max_aspect_ratio, const char *scalar_field, float threshold, const char *comparator)
 Perform triangulation on hit points in point cloud that meet some filtering criteria based on scalar data.
 
void addTrianglesToContext (helios::Context *context) const
void addTrianglesToContext (helios::Context *context) const
 Add triangle geometry to Helios context.
 
uint getGridCellCount () const
uint getGridCellCount () const
 Get the number of cells in the grid.
 
void addGridCell (const helios::vec3 &center, const helios::vec3 &size, float rotation)
void addGridCell (const helios::vec3 &center, const helios::vec3 &size, float rotation)
 Add a cell to the grid.
 
void addGridCell (const helios::vec3 &center, const helios::vec3 &global_anchor, const helios::vec3 &size, const helios::vec3 &global_size, float rotation, const helios::int3 &global_ijk, const helios::int3 &global_count)
void addGridCell (const helios::vec3 &center, const helios::vec3 &global_anchor, const helios::vec3 &size, const helios::vec3 &global_size, float rotation, const helios::int3 &global_ijk, const helios::int3 &global_count)
 Add a cell to the grid, where the cell is part of a larger global rectangular grid.
 
helios::vec3 getCellCenter (uint index) const
helios::vec3 getCellCenter (uint index) const
 Get the (x,y,z) coordinate of a grid cell by its index.
 
helios::vec3 getCellGlobalAnchor (uint index) const
helios::vec3 getCellGlobalAnchor (uint index) const
 Get the (x,y,z) coordinate of a grid global anchor by its index.
 
helios::vec3 getCellSize (uint index) const
helios::vec3 getCellSize (uint index) const
 Get the size of a grid cell by its index.
 
float getCellRotation (uint index) const
float getCellRotation (uint index) const
 Get the size of a grid cell by its index.
 
void calculateHitGridCellGPU ()
void calculateHitGridCellGPU ()
 Determine the grid cell in which each hit point resides for the whole point cloud - GPU accelerated version *‍/.
 
void syntheticScan (helios::Context *context)
void syntheticScan (helios::Context *context)
 Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns only one laser hit per pulse)
 
void syntheticScan (helios::Context *context, bool scan_grid_only, bool record_misses)
void syntheticScan (helios::Context *context, bool scan_grid_only, bool record_misses)
 Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns only one laser hit per pulse)
 
void syntheticScan (helios::Context *context, int rays_per_pulse, float pulse_distance_threshold)
void syntheticScan (helios::Context *context, int rays_per_pulse, float pulse_distance_threshold)
 Run a full-waveform synthetic LiDAR scan based on scan parameters given in an XML file (returns multiple laser hits per pulse)
 
void syntheticScan (helios::Context *context, int rays_per_pulse, float pulse_distance_threshold, bool scan_grid_only, bool record_misses)
void syntheticScan (helios::Context *context, int rays_per_pulse, float pulse_distance_threshold, bool scan_grid_only, bool record_misses)
 Run a full-waveform synthetic LiDAR scan based on scan parameters given in an XML file (returns multiple laser hits per pulse)
 
std::vector< float > calculateSyntheticLeafArea (helios::Context *context)
std::vector< float > calculateSyntheticLeafArea (helios::Context *context)
 Calculate the surface area of all primitives in the context.
 
std::vector< float > calculateSyntheticGtheta (helios::Context *context)
std::vector< float > calculateSyntheticGtheta (helios::Context *context)
 Calculate the G(theta) of all primitives in the context.
 
void setCellLeafArea (float area, uint index)
void setCellLeafArea (float area, uint index)
 Set the leaf area of a grid cell in m^2.
 
float getCellLeafArea (uint index) const
float getCellLeafArea (uint index) const
 Get the leaf area of a grid cell in m^2.
 
float getCellLeafAreaDensity (uint index) const
float getCellLeafAreaDensity (uint index) const
 Get the leaf area density of a grid cell in 1/m.
 
void setCellGtheta (float Gtheta, uint index)
void setCellGtheta (float Gtheta, uint index)
 Set the average G(theta) value of a grid cell.
 
float getCellGtheta (uint index) const
float getCellGtheta (uint index) const
 Get the G(theta) of a grid cell.
 
std::vector< helios::vec3 > gapfillMisses ()
std::vector< helios::vec3 > gapfillMisses ()
 For scans that are missing points (e.g., sky points), this function will attempt to fill in missing points for all scans. This increases the accuracy of LAD calculations because it makes sure all pulses are accounted for.
 
std::vector< helios::vec3 > gapfillMisses (uint scanID)
std::vector< helios::vec3 > gapfillMisses (uint scanID)
 For scans that are missing points (e.g., sky points), this function will attempt to fill in missing points. This increases the accuracy of LAD calculations because it makes sure all pulses are accounted for.
 
std::vector< helios::vec3 > gapfillMisses (uint scanID, const bool gapfill_grid_only, const bool add_flags)
std::vector< helios::vec3 > gapfillMisses (uint scanID, const bool gapfill_grid_only, const bool add_flags)
 For scans that are missing points (e.g., sky points), this function will attempt to fill in missing points. This increases the accuracy of LAD calculations because it makes sure all pulses are accounted for.
 
void calculateLeafAreaGPU ()
void calculateLeafAreaGPU ()
 Calculate the leaf area for each grid volume.
 
void calculateLeafAreaGPU (int min_voxel_hits)
void calculateLeafAreaGPU (int min_voxel_hits)
 Calculate the leaf area for each grid volume.
 
void calculateLeafAreaGPU_testing (int min_voxel_hits)
void calculateLeafAreaGPU_testing (int min_voxel_hits)
 Calculate the leaf area for each grid volume.
 
void calculateLeafAreaGPU_synthetic (helios::Context *context, bool beamoutput, bool fillAnalytic)
void calculateLeafAreaGPU_synthetic (helios::Context *context, bool beamoutput, bool fillAnalytic)
 Calculate the leaf area for each grid volume in a synthetic scan using several different method for estimating P.
 
void calculateLeafAreaGPU_equal_weighting (bool beamoutput, bool fillAnalytic)
void calculateLeafAreaGPU_equal_weighting (bool beamoutput, bool fillAnalytic)
 Calculate the leaf area for each grid volume using equal weighting method.
 
void calculateLeafAreaGPU_equal_weighting (bool beamoutput, bool fillAnalytic, std::vector< float > constant_G)
void calculateLeafAreaGPU_equal_weighting (bool beamoutput, bool fillAnalytic, std::vector< float > constant_G)
 Calculate the leaf area for each grid volume using equal weighting method.
 
void leafReconstructionAlphaMask (float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
void leafReconstructionAlphaMask (float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, const char *mask_file)
 Perform a leaf reconstruction based on texture-masked Patches within each gridcell. The reconstruction produces Patches for each reconstructed leaf surface, with leaf size automatically estimated algorithmically.

 
void leafReconstructionAlphaMask (float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, float leaf_length_constant, const char *mask_file)
void leafReconstructionAlphaMask (float minimum_leaf_group_area, float maximum_leaf_group_area, float leaf_aspect_ratio, float leaf_length_constant, const char *mask_file)
 Perform a leaf reconstruction based on texture-masked Patches within each gridcell. The reconstruction produces Patches for each reconstructed leaf surface, with leaf size set to a constant value.
 
void trunkReconstruction (const helios::vec3 &box_center, const helios::vec3 &box_size, float Lmax, float max_aspect_ratio)
void trunkReconstruction (const helios::vec3 &box_center, const helios::vec3 &box_size, float Lmax, float max_aspect_ratio)
 Reconstruct the trunk of the tree. In order to do this, you must specify the center and size of a rectangular box that encompasses the tree trunk. This routine will then try to find the largest continuous triangle group, which is assumed to correspond to the trunk.
 
void cropBeamsToGridAngleRange (uint source)
void cropBeamsToGridAngleRange (uint source)
 Delete hitpoints that do not pass through / intersect the voxel grid.
 
std::vector< uint > peakFinder (std::vector< float > signal)
std::vector< uint > peakFinder (std::vector< float > signal)
 find the indices of the peaks of a vector of floats
 
@@ -456,7 +468,7 @@

LiDARcloud::LiDARcloud ( - ) + ) @@ -478,31 +490,22 @@

void LiDARcloud::addGrid ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - const helios::int3 &  - ndiv, + const helios::int3 & ndiv, - float  - rotation  - - - - ) - + float rotation )

@@ -531,49 +534,37 @@

void LiDARcloud::addGridCell ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - global_anchor, + const helios::vec3 & global_anchor, - const helios::vec3 &  - size, + const helios::vec3 & size, - const helios::vec3 &  - global_size, + const helios::vec3 & global_size, - float  - rotation, + float rotation, - const helios::int3 &  - global_ijk, + const helios::int3 & global_ijk, - const helios::int3 &  - global_count  - - - - ) - + const helios::int3 & global_count )

@@ -605,25 +596,17 @@

void LiDARcloud::addGridCell ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - float  - rotation  - - - - ) - + float rotation )

@@ -651,8 +634,7 @@

void LiDARcloud::addGridToVisualizer ( - Visualizer *  - visualizer) + Visualizer * visualizer) const @@ -679,8 +661,7 @@

void LiDARcloud::addGridWireFrametoVisualizer ( - Visualizer *  - visualizer) + Visualizer * visualizer) const @@ -707,37 +688,27 @@

void LiDARcloud::addHitPoint ( - uint  - scanID, + uint scanID, - const helios::vec3 &  - xyz, + const helios::vec3 & xyz, - const helios::int2 &  - row_column, + const helios::int2 & row_column, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const std::map< std::string, double > &  - data  - - - - ) - + const std::map< std::string, double > & data )

@@ -765,25 +736,17 @@

void LiDARcloud::addHitPoint ( - uint  - scanID, + uint scanID, - const helios::vec3 &  - xyz, + const helios::vec3 & xyz, - const helios::SphericalCoord &  - direction  - - - - ) - + const helios::SphericalCoord & direction )

@@ -812,31 +775,22 @@

void LiDARcloud::addHitPoint ( - uint  - scanID, + uint scanID, - const helios::vec3 &  - xyz, + const helios::vec3 & xyz, - const helios::SphericalCoord &  - direction, + const helios::SphericalCoord & direction, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -866,37 +820,27 @@

void LiDARcloud::addHitPoint ( - uint  - scanID, + uint scanID, - const helios::vec3 &  - xyz, + const helios::vec3 & xyz, - const helios::SphericalCoord &  - direction, + const helios::SphericalCoord & direction, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const std::map< std::string, double > &  - data  - - - - ) - + const std::map< std::string, double > & data )

@@ -924,31 +868,22 @@

void LiDARcloud::addHitPoint ( - uint  - scanID, + uint scanID, - const helios::vec3 &  - xyz, + const helios::vec3 & xyz, - const helios::SphericalCoord &  - direction, + const helios::SphericalCoord & direction, - const std::map< std::string, double > &  - data  - - - - ) - + const std::map< std::string, double > & data )

@@ -975,19 +910,12 @@

void LiDARcloud::addHitsToVisualizer ( - Visualizer *  - visualizer, + Visualizer * visualizer, - uint  - pointsize  - - - - ) - const + uint pointsize ) const

@@ -1014,25 +942,17 @@

void LiDARcloud::addHitsToVisualizer ( - Visualizer *  - visualizer, + Visualizer * visualizer, - uint  - pointsize, + uint pointsize, - const char *  - color_value  - - - - ) - const + const char * color_value ) const

@@ -1060,8 +980,7 @@

std::vector< uint > LiDARcloud::addLeafReconstructionToContext ( - helios::Context *  - context) + helios::Context * context) const @@ -1089,19 +1008,12 @@

std::vector< uint > LiDARcloud::addLeafReconstructionToContext ( - helios::Context *  - context, + helios::Context * context, - const helios::int2 &  - subpatches  - - - - ) - const + const helios::int2 & subpatches ) const

@@ -1129,8 +1041,7 @@

void LiDARcloud::addLeafReconstructionToVisualizer ( - Visualizer *  - visualizer) + Visualizer * visualizer) const @@ -1157,8 +1068,7 @@

std::vector< uint > LiDARcloud::addReconstructedTriangleGroupsToContext ( - helios::Context *  - context) + helios::Context * context) const @@ -1186,8 +1096,7 @@

uint LiDARcloud::addScan ( - ScanMetadata &  - newscan) + ScanMetadata & newscan) @@ -1215,8 +1124,7 @@

void LiDARcloud::addTrianglesToContext ( - helios::Context *  - context) + helios::Context * context) const @@ -1238,8 +1146,7 @@

void LiDARcloud::addTrianglesToVisualizer ( - Visualizer *  - visualizer) + Visualizer * visualizer) const @@ -1266,19 +1173,12 @@

void LiDARcloud::addTrianglesToVisualizer ( - Visualizer *  - visualizer, + Visualizer * visualizer, - uint  - gridcell  - - - - ) - const + uint gridcell ) const

@@ -1305,8 +1205,7 @@

std::vector< uint > LiDARcloud::addTrunkReconstructionToContext ( - helios::Context *  - context) + helios::Context * context) const @@ -1333,8 +1232,7 @@

void LiDARcloud::addTrunkReconstructionToVisualizer ( - Visualizer *  - visualizer) + Visualizer * visualizer) const @@ -1361,19 +1259,12 @@

void LiDARcloud::addTrunkReconstructionToVisualizer ( - Visualizer *  - visualizer, + Visualizer * visualizer, - const helios::RGBcolor &  - trunk_color  - - - - ) - const + const helios::RGBcolor & trunk_color ) const

@@ -1400,7 +1291,7 @@

void LiDARcloud::calculateHitGridCellGPU ( - ) + ) @@ -1426,7 +1317,7 @@

void LiDARcloud::calculateLeafAreaGPU ( - ) + ) @@ -1447,8 +1338,7 @@

void LiDARcloud::calculateLeafAreaGPU ( - int  - min_voxel_hits) + int min_voxel_hits) @@ -1461,7 +1351,7 @@

Note
Currently, this version assumes all data is discrete-return. The function calculateLeafAreaGPU_testing() deals with waveform data, but may not be working correctly. In the next version, these two functions will be combined.
+
Note
Currently, this version assumes all data is discrete-return. The function calculateLeafAreaGPU_testing() deals with waveform data, but may not be working correctly. In the next version, these two functions will be combined.

Definition at line 901 of file LiDAR.cu.

@@ -1476,19 +1366,12 @@

void LiDARcloud::calculateLeafAreaGPU_equal_weighting ( - bool  - beamoutput, + bool beamoutput, - bool  - fillAnalytic  - - - - ) - + bool fillAnalytic )

@@ -1502,7 +1385,7 @@

Note
writes voxel level data to ../voxeloutput/voxeloutput.txt
-

old code in original calculateLeafAreaGPU_testing() ... do we need to keep this??

+

old code in original calculateLeafAreaGPU_testing() ... do we need to keep this??

Definition at line 4029 of file LiDAR.cu.

@@ -1517,25 +1400,17 @@

void LiDARcloud::calculateLeafAreaGPU_equal_weighting ( - bool  - beamoutput, + bool beamoutput, - bool  - fillAnalytic, + bool fillAnalytic, - std::vector< float >  - constant_G  - - - - ) - + std::vector< float > constant_G )

@@ -1550,7 +1425,7 @@

Note
writes voxel level data to ../voxeloutput/voxeloutput.txt
-

old code in original calculateLeafAreaGPU_testing() ... do we need to keep this??

+

old code in original calculateLeafAreaGPU_testing() ... do we need to keep this??

Definition at line 4483 of file LiDAR.cu.

@@ -1565,25 +1440,17 @@

void LiDARcloud::calculateLeafAreaGPU_synthetic ( - helios::Context *  - context, + helios::Context * context, - bool  - beamoutput, + bool beamoutput, - bool  - fillAnalytic  - - - - ) - + bool fillAnalytic )

@@ -1612,8 +1479,7 @@

void LiDARcloud::calculateLeafAreaGPU_testing ( - int  - min_voxel_hits) + int min_voxel_hits) @@ -1640,8 +1506,7 @@

std::vector< float > LiDARcloud::calculateSyntheticGtheta ( - helios::Context *  - context) + helios::Context * context) @@ -1668,8 +1533,7 @@

std::vector< float > LiDARcloud::calculateSyntheticLeafArea ( - helios::Context *  - context) + helios::Context * context) @@ -1700,8 +1564,7 @@

void LiDARcloud::coordinateRotation ( - const helios::SphericalCoord &  - rotation) + const helios::SphericalCoord & rotation) @@ -1728,25 +1591,17 @@

void LiDARcloud::coordinateRotation ( - float  - rotation, + float rotation, - const helios::vec3 &  - line_base, + const helios::vec3 & line_base, - const helios::vec3 &  - line_direction  - - - - ) - + const helios::vec3 & line_direction )

@@ -1774,19 +1629,12 @@

void LiDARcloud::coordinateRotation ( - uint  - scanID, + uint scanID, - const helios::SphericalCoord &  - rotation  - - - - ) - + const helios::SphericalCoord & rotation )

@@ -1813,8 +1661,7 @@

void LiDARcloud::coordinateShift ( - const helios::vec3 &  - shift) + const helios::vec3 & shift) @@ -1841,19 +1688,12 @@

void LiDARcloud::coordinateShift ( - uint  - scanID, + uint scanID, - const helios::vec3 &  - shift  - - - - ) - + const helios::vec3 & shift )

@@ -1880,8 +1720,7 @@

void LiDARcloud::cropBeamsToGridAngleRange ( - uint  - source) + uint source) @@ -1908,8 +1747,7 @@

void LiDARcloud::deleteHitPoint ( - uint  - index) + uint index) @@ -1936,7 +1774,7 @@

void LiDARcloud::disableMessages ( - ) + ) @@ -1957,8 +1795,7 @@

void LiDARcloud::distanceFilter ( - float  - maxdistance) + float maxdistance) @@ -1985,19 +1822,12 @@

bool LiDARcloud::doesHitDataExist ( - uint  - index, + uint index, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -2024,7 +1854,7 @@

void LiDARcloud::enableMessages ( - ) + ) @@ -2045,8 +1875,7 @@

void LiDARcloud::exportGtheta ( - const char *  - filename) + const char * filename) @@ -2073,8 +1902,7 @@

void LiDARcloud::exportLeafAreaDensities ( - const char *  - filename) + const char * filename) @@ -2101,8 +1929,7 @@

void LiDARcloud::exportLeafAreas ( - const char *  - filename) + const char * filename) @@ -2129,8 +1956,7 @@

void LiDARcloud::exportPointCloud ( - const char *  - filename) + const char * filename) @@ -2158,19 +1984,12 @@

void LiDARcloud::exportPointCloud ( - const char *  - filename, + const char * filename, - uint  - scanID  - - - - ) - + uint scanID )

@@ -2197,19 +2016,12 @@

void LiDARcloud::exportPointCloudPTX ( - const char *  - filename, + const char * filename, - uint  - scanID  - - - - ) - + uint scanID )

@@ -2236,8 +2048,7 @@

void LiDARcloud::exportTriangleAreas ( - const char *  - filename) + const char * filename) @@ -2264,19 +2075,12 @@

void LiDARcloud::exportTriangleAreas ( - const char *  - filename, + const char * filename, - int  - gridcell  - - - - ) - + int gridcell )

@@ -2303,19 +2107,12 @@

void LiDARcloud::exportTriangleInclinationDistribution ( - const char *  - filename, + const char * filename, - uint  - Nbins  - - - - ) - + uint Nbins )

@@ -2342,8 +2139,7 @@

void LiDARcloud::exportTriangleNormals ( - const char *  - filename) + const char * filename) @@ -2370,19 +2166,12 @@

void LiDARcloud::exportTriangleNormals ( - const char *  - filename, + const char * filename, - int  - gridcell  - - - - ) - + int gridcell )

@@ -2409,7 +2198,7 @@

void LiDARcloud::firstHitFilter ( - ) + ) @@ -2431,7 +2220,7 @@

std::vector< helios::vec3 > LiDARcloud::gapfillMisses ( - ) + ) @@ -2453,8 +2242,7 @@

std::vector< helios::vec3 > LiDARcloud::gapfillMisses ( - uint  - scanID) + uint scanID) @@ -2482,25 +2270,17 @@

std::vector< helios::vec3 > LiDARcloud::gapfillMisses ( - uint  - scanID, + uint scanID, - const bool  - gapfill_grid_only, + const bool gapfill_grid_only, - const bool  - add_flags  - - - - ) - + const bool add_flags )

@@ -2529,8 +2309,7 @@

helios::vec3 LiDARcloud::getCellCenter ( - uint  - index) + uint index) const @@ -2557,8 +2336,7 @@

helios::vec3 LiDARcloud::getCellGlobalAnchor ( - uint  - index) + uint index) const @@ -2585,8 +2363,7 @@

float LiDARcloud::getCellGtheta ( - uint  - index) + uint index) const @@ -2613,8 +2390,7 @@

float LiDARcloud::getCellLeafArea ( - uint  - index) + uint index) const @@ -2641,8 +2417,7 @@

float LiDARcloud::getCellLeafAreaDensity ( - uint  - index) + uint index) const @@ -2669,8 +2444,7 @@

float LiDARcloud::getCellRotation ( - uint  - index) + uint index) const @@ -2697,8 +2471,7 @@

helios::vec3 LiDARcloud::getCellSize ( - uint  - index) + uint index) const @@ -2721,19 +2494,12 @@

void LiDARcloud::getGridBoundingBox ( - helios::vec3 &  - boxmin, + helios::vec3 & boxmin, - helios::vec3 &  - boxmax  - - - - ) - const + helios::vec3 & boxmax ) const

@@ -2760,8 +2526,7 @@

uint LiDARcloud::getGridCellCount ( - void  - ) + void ) const @@ -2782,19 +2547,12 @@

void LiDARcloud::getHitBoundingBox ( - helios::vec3 &  - boxmin, + helios::vec3 & boxmin, - helios::vec3 &  - boxmax  - - - - ) - const + helios::vec3 & boxmax ) const

@@ -2821,8 +2579,7 @@

RGBcolor LiDARcloud::getHitColor ( - uint  - index) + uint index) const @@ -2849,7 +2606,7 @@

uint LiDARcloud::getHitCount ( - ) + ) const @@ -2870,19 +2627,12 @@

double LiDARcloud::getHitData ( - uint  - index, + uint index, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -2910,8 +2660,7 @@

int LiDARcloud::getHitGridCell ( - uint  - index) + uint index) const @@ -2941,25 +2690,17 @@

int LiDARcloud::getHitIndex ( - uint  - scanID, + uint scanID, - uint  - row, + uint row, - uint  - column  - - - - ) - const + uint column ) const

@@ -2988,8 +2729,7 @@

helios::SphericalCoord LiDARcloud::getHitRaydir ( - uint  - index) + uint index) const @@ -3016,8 +2756,7 @@

int LiDARcloud::getHitScanID ( - uint  - index) + uint index) const @@ -3044,8 +2783,7 @@

helios::vec3 LiDARcloud::getHitXYZ ( - uint  - index) + uint index) const @@ -3072,8 +2810,7 @@

float LiDARcloud::getScanBeamDivergence ( - uint  - scanID) + uint scanID) const @@ -3101,8 +2838,7 @@

float LiDARcloud::getScanBeamExitDiameter ( - uint  - scanID) + uint scanID) const @@ -3130,8 +2866,7 @@

std::vector< std::string > LiDARcloud::getScanColumnFormat ( - uint  - scanID) + uint scanID) const @@ -3158,7 +2893,7 @@

uint LiDARcloud::getScanCount ( - ) + ) @@ -3179,8 +2914,7 @@

helios::vec3 LiDARcloud::getScanOrigin ( - uint  - scanID) + uint scanID) const @@ -3207,8 +2941,7 @@

helios::vec2 LiDARcloud::getScanRangePhi ( - uint  - scanID) + uint scanID) const @@ -3236,8 +2969,7 @@

helios::vec2 LiDARcloud::getScanRangeTheta ( - uint  - scanID) + uint scanID) const @@ -3265,8 +2997,7 @@

uint LiDARcloud::getScanSizePhi ( - uint  - scanID) + uint scanID) const @@ -3293,8 +3024,7 @@

uint LiDARcloud::getScanSizeTheta ( - uint  - scanID) + uint scanID) const @@ -3321,8 +3051,7 @@

Triangulation LiDARcloud::getTriangle ( - uint  - index) + uint index) const @@ -3344,7 +3073,7 @@

uint LiDARcloud::getTriangleCount ( - ) + ) const @@ -3365,7 +3094,7 @@

void LiDARcloud::lastHitFilter ( - ) + ) @@ -3387,31 +3116,22 @@

void LiDARcloud::leafReconstructionAlphaMask ( - float  - minimum_leaf_group_area, + float minimum_leaf_group_area, - float  - maximum_leaf_group_area, + float maximum_leaf_group_area, - float  - leaf_aspect_ratio, + float leaf_aspect_ratio, - const char *  - mask_file  - - - - ) - + const char * mask_file )

@@ -3441,37 +3161,27 @@

void LiDARcloud::leafReconstructionAlphaMask ( - float  - minimum_leaf_group_area, + float minimum_leaf_group_area, - float  - maximum_leaf_group_area, + float maximum_leaf_group_area, - float  - leaf_aspect_ratio, + float leaf_aspect_ratio, - float  - leaf_length_constant, + float leaf_length_constant, - const char *  - mask_file  - - - - ) - + const char * mask_file )

@@ -3501,8 +3211,7 @@

void LiDARcloud::loadXML ( - const char *  - filename) + const char * filename) @@ -3529,19 +3238,12 @@

void LiDARcloud::loadXML ( - const char *  - filename, + const char * filename, - bool  - load_grid_only  - - - - ) - + bool load_grid_only )

@@ -3568,8 +3270,7 @@

void LiDARcloud::maxPulseFilter ( - const char *  - scalar) + const char * scalar) @@ -3597,8 +3298,7 @@

void LiDARcloud::minPulseFilter ( - const char *  - scalar) + const char * scalar) @@ -3626,8 +3326,7 @@

std::vector< uint > LiDARcloud::peakFinder ( - std::vector< float >  - signal) + std::vector< float > signal) @@ -3654,8 +3353,7 @@

void LiDARcloud::reflectanceFilter ( - float  - minreflectance) + float minreflectance) @@ -3683,25 +3381,17 @@

void LiDARcloud::scalarFilter ( - const char *  - scalar_field, + const char * scalar_field, - float  - threshold, + float threshold, - const char *  - comparator  - - - - ) - + const char * comparator )

@@ -3730,7 +3420,7 @@

int LiDARcloud::selfTest ( - ) + ) @@ -3751,19 +3441,12 @@

void LiDARcloud::setCellGtheta ( - float  - Gtheta, + float Gtheta, - uint  - index  - - - - ) - + uint index )

@@ -3790,19 +3473,12 @@

void LiDARcloud::setCellLeafArea ( - float  - area, + float area, - uint  - index  - - - - ) - + uint index )

@@ -3829,25 +3505,17 @@

void LiDARcloud::setHitData ( - uint  - index, + uint index, - const char *  - label, + const char * label, - double  - value  - - - - ) - + double value )

@@ -3874,19 +3542,12 @@

void LiDARcloud::setHitGridCell ( - uint  - index, + uint index, - int  - cell  - - - - ) - + int cell )

@@ -3913,8 +3574,7 @@

void LiDARcloud::syntheticScan ( - helios::Context *  - context) + helios::Context * context) @@ -3941,25 +3601,17 @@

void LiDARcloud::syntheticScan ( - helios::Context *  - context, + helios::Context * context, - bool  - scan_grid_only, + bool scan_grid_only, - bool  - record_misses  - - - - ) - + bool record_misses )

@@ -3973,7 +3625,7 @@

Note
Calling syntheticScan() with scan_grid_only=true can save substantial memory for contexts with large domains.
+
Note
Calling syntheticScan() with scan_grid_only=true can save substantial memory for contexts with large domains.

Definition at line 3097 of file LiDAR.cu.

@@ -3988,25 +3640,17 @@

void LiDARcloud::syntheticScan ( - helios::Context *  - context, + helios::Context * context, - int  - rays_per_pulse, + int rays_per_pulse, - float  - pulse_distance_threshold  - - - - ) - + float pulse_distance_threshold )

@@ -4021,7 +3665,7 @@

Note
Calling syntheticScan() with rays_per_pulse=1 will effectively run a discrete return synthetic scan.
+
Note
Calling syntheticScan() with rays_per_pulse=1 will effectively run a discrete return synthetic scan.

Definition at line 3101 of file LiDAR.cu.

@@ -4036,37 +3680,27 @@

void LiDARcloud::syntheticScan ( - helios::Context *  - context, + helios::Context * context, - int  - rays_per_pulse, + int rays_per_pulse, - float  - pulse_distance_threshold, + float pulse_distance_threshold, - bool  - scan_grid_only, + bool scan_grid_only, - bool  - record_misses  - - - - ) - + bool record_misses )

@@ -4082,7 +3716,7 @@

Note
Calling syntheticScan() with rays_per_pulse=1 will effectively run a discrete return synthetic scan.
+
Note
Calling syntheticScan() with rays_per_pulse=1 will effectively run a discrete return synthetic scan.

Definition at line 3105 of file LiDAR.cu.

@@ -4097,19 +3731,12 @@

void LiDARcloud::triangulateHitPoints ( - float  - Lmax, + float Lmax, - float  - max_aspect_ratio  - - - - ) - + float max_aspect_ratio )

@@ -4136,37 +3763,27 @@

void LiDARcloud::triangulateHitPoints ( - float  - Lmax, + float Lmax, - float  - max_aspect_ratio, + float max_aspect_ratio, - const char *  - scalar_field, + const char * scalar_field, - float  - threshold, + float threshold, - const char *  - comparator  - - - - ) - + const char * comparator )

@@ -4197,31 +3814,22 @@

void LiDARcloud::trunkReconstruction ( - const helios::vec3 &  - box_center, + const helios::vec3 & box_center, - const helios::vec3 &  - box_size, + const helios::vec3 & box_size, - float  - Lmax, + float Lmax, - float  - max_aspect_ratio  - - - - ) - + float max_aspect_ratio )

@@ -4231,8 +3839,8 @@

[in]box_center(x,y,z) coordinates of the center of a rectangular box that encompasses the tree trunk. [in]box_sizeDimension of the trunk box in the x-, y-, and z- directions. - [in]Lmaxmaximum dimension of triangles (see also triangulateHitPoints()). - [in]max_aspect_ratioMaximum allowable aspect ratio of triangles (see also triangulateHitPoints()) + [in]Lmaxmaximum dimension of triangles (see also triangulateHitPoints()). + [in]max_aspect_ratioMaximum allowable aspect ratio of triangles (see also triangulateHitPoints()) @@ -4250,7 +3858,7 @@

void LiDARcloud::validateRayDirections ( - ) + ) @@ -4269,43 +3877,32 @@

void LiDARcloud::xyzFilter ( - float  - xmin, + float xmin, - float  - xmax, + float xmax, - float  - ymin, + float ymin, - float  - ymax, + float ymax, - float  - zmin, + float zmin, - float  - zmax  - - - - ) - + float zmax )

@@ -4337,49 +3934,37 @@

void LiDARcloud::xyzFilter ( - float  - xmin, + float xmin, - float  - xmax, + float xmax, - float  - ymin, + float ymin, - float  - ymax, + float ymax, - float  - zmin, + float zmin, - float  - zmax, + float zmax, - bool  - deleteOutside  - - - - ) - + bool deleteOutside )

@@ -4413,7 +3998,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_photosynthesis_model.html b/doc/html/class_photosynthesis_model.html index 3d9dd9a77..fff77878e 100644 --- a/doc/html/class_photosynthesis_model.html +++ b/doc/html/class_photosynthesis_model.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,66 +105,66 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 PhotosynthesisModel (helios::Context *a_context)
 PhotosynthesisModel (helios::Context *a_context)
 Default constructor.
 
int selfTest ()
int selfTest ()
 
void setModelType_Empirical ()
void setModelType_Empirical ()
 Sets photosynthesis to be calculated according to the empirical model.
 
void setModelType_Farquhar ()
void setModelType_Farquhar ()
 Sets photosynthesis to be calculated according to the Farquhar-von Caemmerer-Berry model.
 
void setModelCoefficients (const EmpiricalModelCoefficients &modelcoefficients)
void setModelCoefficients (const EmpiricalModelCoefficients &modelcoefficients)
 Set the empirical model coefficients for all primitives.
 
void setModelCoefficients (const EmpiricalModelCoefficients &modelcoefficients, const std::vector< uint > &UUIDs)
void setModelCoefficients (const EmpiricalModelCoefficients &modelcoefficients, const std::vector< uint > &UUIDs)
 Set the empirical model coefficients for a subset of primitives based on their UUIDs.
 
void setModelCoefficients (const FarquharModelCoefficients &modelcoefficients)
void setModelCoefficients (const FarquharModelCoefficients &modelcoefficients)
 Set the Farquhar-von Caemmerer-Berry model coefficients for all primitives.
 
void setModelCoefficients (const FarquharModelCoefficients &modelcoefficients, const std::vector< uint > &UUIDs)
void setModelCoefficients (const FarquharModelCoefficients &modelcoefficients, const std::vector< uint > &UUIDs)
 Set the Farquhar-von Caemmerer-Berry model coefficients for a subset of primitives based on their UUIDs.
 
void setModelCoefficients (const std::vector< FarquharModelCoefficients > &modelcoefficients, const std::vector< uint > &UUIDs)
void setModelCoefficients (const std::vector< FarquharModelCoefficients > &modelcoefficients, const std::vector< uint > &UUIDs)
 Set the Farquhar-von Caemmerer-Berry model coefficients for a subset of primitives, where coefficients differ between primitives.
 
void setFarquharCoefficientsFromLibrary (const std::string &species)
void setFarquharCoefficientsFromLibrary (const std::string &species)
 Set the Farquhar-von Caemmerer-Berry model coefficients for all primitives based on a species from the library.
 
void setFarquharCoefficientsFromLibrary (const std::string &species, const std::vector< uint > &UUIDs)
void setFarquharCoefficientsFromLibrary (const std::string &species, const std::vector< uint > &UUIDs)
 Set the Farquhar-von Caemmerer-Berry model coefficients for a subset of primitives based on a species from the library.
 
FarquharModelCoefficients getFarquharCoefficientsFromLibrary (const std::string &species)
FarquharModelCoefficients getFarquharCoefficientsFromLibrary (const std::string &species)
 Get Farquhar-von Caemmerer-Berry model coefficients for a species from the library.
 
void run ()
void run ()
 Run the model for all UUIDs in the Context.
 
void run (const std::vector< uint > &lUUIDs)
void run (const std::vector< uint > &lUUIDs)
 Run the model for a select sub-set of UUIDs.
 
EmpiricalModelCoefficients getEmpiricalModelCoefficients (uint UUID)
EmpiricalModelCoefficients getEmpiricalModelCoefficients (uint UUID)
 Get the current model coefficients for the empirical model.
 
FarquharModelCoefficients getFarquharModelCoefficients (uint UUID)
FarquharModelCoefficients getFarquharModelCoefficients (uint UUID)
 Get the current model coefficients for the Farquhar-von Caemmerer-Berry model.
 
void disableMessages ()
void disableMessages ()
 Disable output messages to the standard output.
 
void enableMessages ()
void enableMessages ()
 Enable output messages to the standard output.
 
void optionalOutputPrimitiveData (const char *label)
void optionalOutputPrimitiveData (const char *label)
 Add optional output primitive data values to the Context.
 
void printDefaultValueReport () const
void printDefaultValueReport () const
 Print a report detailing usage of default input values for all primitives in the Context.
 
void printDefaultValueReport (const std::vector< uint > &UUIDs) const
void printDefaultValueReport (const std::vector< uint > &UUIDs) const
 Print a report detailing usage of default input values based on a subset of primitive UUIDs.
 
@@ -172,8 +184,7 @@

PhotosynthesisModel::PhotosynthesisModel ( - helios::Context *  - a_context) + helios::Context * a_context) @@ -206,7 +217,7 @@

void PhotosynthesisModel::disableMessages ( - ) + ) @@ -227,7 +238,7 @@

void PhotosynthesisModel::enableMessages ( - ) + ) @@ -248,8 +259,7 @@

EmpiricalModelCoefficients PhotosynthesisModel::getEmpiricalModelCoefficients ( - uint  - UUID) + uint UUID) @@ -277,8 +287,7 @@

FarquharModelCoefficients PhotosynthesisModel::getFarquharCoefficientsFromLibrary ( - const std::string &  - species) + const std::string & species) @@ -306,8 +315,7 @@

FarquharModelCoefficients PhotosynthesisModel::getFarquharModelCoefficients ( - uint  - UUID) + uint UUID) @@ -335,8 +343,7 @@

void PhotosynthesisModel::optionalOutputPrimitiveData ( - const char *  - label) + const char * label) @@ -363,7 +370,7 @@

void PhotosynthesisModel::printDefaultValueReport ( - ) + ) const @@ -384,8 +391,7 @@

void PhotosynthesisModel::printDefaultValueReport ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) const @@ -407,7 +413,7 @@

void PhotosynthesisModel::run ( - ) + ) @@ -428,8 +434,7 @@

void PhotosynthesisModel::run ( - const std::vector< uint > &  - lUUIDs) + const std::vector< uint > & lUUIDs) @@ -456,7 +461,7 @@

int PhotosynthesisModel::selfTest ( - ) + ) @@ -475,8 +480,7 @@

void PhotosynthesisModel::setFarquharCoefficientsFromLibrary ( - const std::string &  - species) + const std::string & species) @@ -503,19 +507,12 @@

void PhotosynthesisModel::setFarquharCoefficientsFromLibrary ( - const std::string &  - species, + const std::string & species, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -542,8 +539,7 @@

void PhotosynthesisModel::setModelCoefficients ( - const EmpiricalModelCoefficients &  - modelcoefficients) + const EmpiricalModelCoefficients & modelcoefficients) @@ -556,7 +552,7 @@

Note
The model type will be set based on the most recent call to setModelCoefficients().
+
Note
The model type will be set based on the most recent call to setModelCoefficients().

Definition at line 166 of file PhotosynthesisModel.cpp.

@@ -571,19 +567,12 @@

void PhotosynthesisModel::setModelCoefficients ( - const EmpiricalModelCoefficients &  - modelcoefficients, + const EmpiricalModelCoefficients & modelcoefficients, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -596,7 +585,7 @@

Note
The model type will be set based on the most recent call to setModelCoefficients().
+
Note
The model type will be set based on the most recent call to setModelCoefficients().

Definition at line 172 of file PhotosynthesisModel.cpp.

@@ -611,8 +600,7 @@

void PhotosynthesisModel::setModelCoefficients ( - const FarquharModelCoefficients &  - modelcoefficients) + const FarquharModelCoefficients & modelcoefficients) @@ -625,7 +613,7 @@

Note
The model type will be set based on the most recent call to setModelCoefficients().
+
Note
The model type will be set based on the most recent call to setModelCoefficients().

Definition at line 180 of file PhotosynthesisModel.cpp.

@@ -640,19 +628,12 @@

void PhotosynthesisModel::setModelCoefficients ( - const FarquharModelCoefficients &  - modelcoefficients, + const FarquharModelCoefficients & modelcoefficients, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -665,7 +646,7 @@

Note
The model type will be set based on the most recent call to setModelCoefficients().
+
Note
The model type will be set based on the most recent call to setModelCoefficients().

Definition at line 186 of file PhotosynthesisModel.cpp.

@@ -680,19 +661,12 @@

void PhotosynthesisModel::setModelCoefficients ( - const std::vector< FarquharModelCoefficients > &  - modelcoefficients, + const std::vector< FarquharModelCoefficients > & modelcoefficients, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -720,7 +694,7 @@

void PhotosynthesisModel::setModelType_Empirical ( - ) + ) @@ -741,7 +715,7 @@

void PhotosynthesisModel::setModelType_Farquhar ( - ) + ) @@ -760,7 +734,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_plant_architecture.html b/doc/html/class_plant_architecture.html index 945e3918e..c4e20c297 100644 --- a/doc/html/class_plant_architecture.html +++ b/doc/html/class_plant_architecture.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -95,201 +107,201 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 PlantArchitecture (helios::Context *context_ptr)
 PlantArchitecture (helios::Context *context_ptr)
 Main architectural model class constructor.
 
void optionalOutputObjectData (const std::string &object_data_label)
void optionalOutputObjectData (const std::string &object_data_label)
 Add optional output object data values to the Context.
 
void optionalOutputObjectData (const std::vector< std::string > &object_data_labels)
void optionalOutputObjectData (const std::vector< std::string > &object_data_labels)
 Add optional output object data values to the Context.
 
void loadPlantModelFromLibrary (const std::string &plant_label)
void loadPlantModelFromLibrary (const std::string &plant_label)
 Load an existing plant model from the library.
 
uint buildPlantInstanceFromLibrary (const helios::vec3 &base_position, float age)
uint buildPlantInstanceFromLibrary (const helios::vec3 &base_position, float age)
 Build a plant instance based on the model currently loaded from the library.
 
std::vector< uint > buildPlantCanopyFromLibrary (const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate=1.f)
std::vector< uint > buildPlantCanopyFromLibrary (const helios::vec3 &canopy_center_position, const helios::vec2 &plant_spacing_xy, const helios::int2 &plant_count_xy, float age, float germination_rate=1.f)
 Build a canopy of regularly spaced plants based on the model currently loaded from the library.
 
ShootParameters getCurrentShootParameters (const std::string &shoot_type_label)
ShootParameters getCurrentShootParameters (const std::string &shoot_type_label)
 Get the shoot parameters structure for a specific shoot type in the current plant model.
 
std::map< std::string, ShootParameters > getCurrentShootParameters ()
std::map< std::string, ShootParameters > getCurrentShootParameters ()
 Get the shoot parameters structure for all shoot types in the current plant model.
 
std::map< std::string, PhytomerParameters > getCurrentPhytomerParameters ()
std::map< std::string, PhytomerParameters > getCurrentPhytomerParameters ()
 Get the phytomer parameters structure for all shoot types in the current plant model.
 
void updateCurrentShootParameters (const std::string &shoot_type_label, const ShootParameters &params)
void updateCurrentShootParameters (const std::string &shoot_type_label, const ShootParameters &params)
 Update the parameters of a single shoot type in the current plant model.
 
void updateCurrentShootParameters (const std::map< std::string, ShootParameters > &params)
void updateCurrentShootParameters (const std::map< std::string, ShootParameters > &params)
 Update the parameters of all shoot types in the current plant model.
 
uint addPlantInstance (const helios::vec3 &base_position, float current_age)
uint addPlantInstance (const helios::vec3 &base_position, float current_age)
 Create an instance of a plant.
 
uint duplicatePlantInstance (uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age)
uint duplicatePlantInstance (uint plantID, const helios::vec3 &base_position, const AxisRotation &base_rotation, float current_age)
 Duplicate an existing plant instance and specify its base position and age.
 
void deletePlantInstance (uint plantID)
void deletePlantInstance (uint plantID)
 Delete an existing plant instance.
 
void deletePlantInstance (const std::vector< uint > &plantIDs)
void deletePlantInstance (const std::vector< uint > &plantIDs)
 Delete multiple existing plant instances.
 
void setPlantPhenologicalThresholds (uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
void setPlantPhenologicalThresholds (uint plantID, float time_to_dormancy_break, float time_to_flower_initiation, float time_to_flower_opening, float time_to_fruit_set, float time_to_fruit_maturity, float time_to_dormancy, float max_leaf_lifespan=1e6, bool is_evergreen=false)
 Specify the threshold values for plant phenological stages.
 
void disablePlantPhenology (uint plantID)
void disablePlantPhenology (uint plantID)
 
void advanceTime (float time_step_days)
void advanceTime (float time_step_days)
 Advance plant growth by a specified time interval for all plants.
 
void advanceTime (int time_step_years, float time_step_days)
void advanceTime (int time_step_years, float time_step_days)
 Advance plant growth by a specified time interval for all plants.
 
void advanceTime (uint plantID, float time_step_days)
void advanceTime (uint plantID, float time_step_days)
 Advance plant growth by a specified time interval for a single plant.
 
void defineShootType (const std::string &shoot_type_label, const ShootParameters &shoot_params)
void defineShootType (const std::string &shoot_type_label, const ShootParameters &shoot_params)
 Define a new shoot type based on a set of ShootParameters.
 
uint addBaseStemShoot (uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
 Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has already been created using the addPlantInstance() method.
uint addBaseStemShoot (uint plantID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
 Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has already been created using the addPlantInstance() method.
 
uint appendShoot (uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
uint appendShoot (uint plantID, int parent_shoot_ID, uint current_node_number, const AxisRotation &base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
 Manually append a new shoot at the end of an existing shoot. This is used when the characteristics of a shoot change along its length (e.g., from a unifoliate to trifoliate leaf).
 
uint addChildShoot (uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
uint addChildShoot (uint plantID, int parent_shoot_ID, uint parent_node_index, uint current_node_number, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label, uint petiole_index=0)
 Manually add a child shoot at the axillary bud of a phytomer.
 
uint addEpicormicShoot (uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
uint addEpicormicShoot (uint plantID, int parent_shoot_ID, float parent_position_fraction, uint current_node_number, float zenith_perturbation_degrees, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper, const std::string &shoot_type_label)
 Manually add a child epicormic shoot (water sprout) at an arbitrary position along the shoot.
 
int appendPhytomerToShoot (uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
int appendPhytomerToShoot (uint plantID, uint shootID, const PhytomerParameters &phytomer_parameters, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction)
 Add a new phytomer at the terminal bud of a shoot.
 
void enableEpicormicChildShoots (uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday)
void enableEpicormicChildShoots (uint plantID, const std::string &epicormic_shoot_type_label, float epicormic_probability_perlength_perday)
 Enable shoot type to produce epicormic child shoots (water sprouts)
 
void disableInternodeContextBuild ()
void disableInternodeContextBuild ()
 Do not build internode primitive geometry in the Context.
 
void disablePetioleContextBuild ()
void disablePetioleContextBuild ()
 Do not build petiole primitive geometry in the Context.
 
void disablePeduncleContextBuild ()
void disablePeduncleContextBuild ()
 Do not build peduncle primitive geometry in the Context.
 
void enableGroundClipping (float ground_height=0.f)
void enableGroundClipping (float ground_height=0.f)
 Enable automatic removal of organs that are below the ground plane.
 
void initializePlantCarbohydratePool (uint plantID, float carbohydrate_concentration_molC_m3)
void initializePlantCarbohydratePool (uint plantID, float carbohydrate_concentration_molC_m3)
 
void initializeShootCarbohydratePool (uint plantID, uint shootID, float carbohydrate_concentration_molC_m3)
void initializeShootCarbohydratePool (uint plantID, uint shootID, float carbohydrate_concentration_molC_m3)
 
void incrementPhytomerInternodeGirth (uint plantID, uint shootID, uint node_number, bool update_context_geometry)
void incrementPhytomerInternodeGirth (uint plantID, uint shootID, uint node_number, bool update_context_geometry)
 
void setPhytomerLeafScale (uint plantID, uint shootID, uint node_number, float leaf_scale_factor_fraction)
void setPhytomerLeafScale (uint plantID, uint shootID, uint node_number, float leaf_scale_factor_fraction)
 
void setPlantBasePosition (uint plantID, const helios::vec3 &base_position)
void setPlantBasePosition (uint plantID, const helios::vec3 &base_position)
 
void setPlantAge (uint plantID, float current_age)
void setPlantAge (uint plantID, float current_age)
 
void harvestPlant (uint plantID)
void harvestPlant (uint plantID)
 
void removeShootLeaves (uint plantID, uint shootID)
void removeShootLeaves (uint plantID, uint shootID)
 
void removePlantLeaves (uint plantID)
void removePlantLeaves (uint plantID)
 
void makePlantDormant (uint plantID)
void makePlantDormant (uint plantID)
 
void breakPlantDormancy (uint plantID)
void breakPlantDormancy (uint plantID)
 
float getPlantAge (uint plantID) const
float getPlantAge (uint plantID) const
 
uint getShootNodeCount (uint plantID, uint shootID) const
uint getShootNodeCount (uint plantID, uint shootID) const
 
float getShootTaper (uint plantID, uint shootID) const
float getShootTaper (uint plantID, uint shootID) const
 
helios::vec3 getPlantBasePosition (uint plantID) const
helios::vec3 getPlantBasePosition (uint plantID) const
 
float sumPlantLeafArea (uint plantID) const
float sumPlantLeafArea (uint plantID) const
 Sum the one-sided leaf area of all leaves in the plant.
 
std::vector< uint > getAllPlantObjectIDs (uint plantID) const
std::vector< uint > getAllPlantObjectIDs (uint plantID) const
 Get object IDs for all organs objects for a given plant.
 
std::vector< uint > getAllPlantUUIDs (uint plantID) const
std::vector< uint > getAllPlantUUIDs (uint plantID) const
 Get primitive UUIDs for all primitives in a given plant.
 
std::vector< uint > getPlantInternodeObjectIDs (uint plantID) const
std::vector< uint > getPlantInternodeObjectIDs (uint plantID) const
 Get object IDs for all internode (Tube) objects for a given plant.
 
std::vector< uint > getPlantPetioleObjectIDs (uint plantID) const
std::vector< uint > getPlantPetioleObjectIDs (uint plantID) const
 Get object IDs for all petiole (Tube) objects for a given plant.
 
std::vector< uint > getPlantLeafObjectIDs (uint plantID) const
std::vector< uint > getPlantLeafObjectIDs (uint plantID) const
 Get object IDs for all leaf objects for a given plant.
 
std::vector< uint > getPlantPeduncleObjectIDs (uint plantID) const
std::vector< uint > getPlantPeduncleObjectIDs (uint plantID) const
 Get object IDs for all peduncle (Tube) objects for a given plant.
 
std::vector< uint > getPlantFlowerObjectIDs (uint plantID) const
std::vector< uint > getPlantFlowerObjectIDs (uint plantID) const
 Get object IDs for all inflorescence objects for a given plant.
 
std::vector< uint > getPlantFruitObjectIDs (uint plantID) const
std::vector< uint > getPlantFruitObjectIDs (uint plantID) const
 Get object IDs for all fruit objects for a given plant.
 
std::vector< uint > getAllUUIDs () const
std::vector< uint > getAllUUIDs () const
 Get UUIDs for all existing plant primitives.
 
std::vector< uint > getAllLeafUUIDs () const
std::vector< uint > getAllLeafUUIDs () const
 Get UUIDs for all existing leaf primitives.
 
std::vector< uint > getAllInternodeUUIDs () const
std::vector< uint > getAllInternodeUUIDs () const
 Get UUIDs for all existing internode primitives.
 
std::vector< uint > getAllPetioleUUIDs () const
std::vector< uint > getAllPetioleUUIDs () const
 Get UUIDs for all existing petiole primitives.
 
std::vector< uint > getAllPeduncleUUIDs () const
std::vector< uint > getAllPeduncleUUIDs () const
 Get UUIDs for all existing peduncle primitives.
 
std::vector< uint > getAllFlowerUUIDs () const
std::vector< uint > getAllFlowerUUIDs () const
 Get UUIDs for all existing flower primitives.
 
std::vector< uint > getAllFruitUUIDs () const
std::vector< uint > getAllFruitUUIDs () const
 Get UUIDs for all existing fruit primitives.
 
std::vector< uint > getAllObjectIDs () const
std::vector< uint > getAllObjectIDs () const
 Get object IDs for all existing plant compound objects.
 
std::string getPlantString (uint plantID) const
std::string getPlantString (uint plantID) const
 
uint generatePlantFromString (const std::string &generation_string, const PhytomerParameters &phytomer_parameters)
uint generatePlantFromString (const std::string &generation_string, const PhytomerParameters &phytomer_parameters)
 
uint generatePlantFromString (const std::string &generation_string, const std::map< std::string, PhytomerParameters > &phytomer_parameters)
uint generatePlantFromString (const std::string &generation_string, const std::map< std::string, PhytomerParameters > &phytomer_parameters)
 
void writePlantStructureXML (uint plantID, const std::string &filename) const
void writePlantStructureXML (uint plantID, const std::string &filename) const
 
std::vector< uint > readPlantStructureXML (const std::string &filename, bool quiet=false)
std::vector< uint > readPlantStructureXML (const std::string &filename, bool quiet=false)
 
- +

Static Public Member Functions

static int selfTest ()
static int selfTest ()
 Unit test routines.
 
- + - +

Friends

struct Phytomer
struct Phytomer
 
struct Shoot
struct Shoot
 

Detailed Description

@@ -308,8 +320,7 @@

PlantArchitecture::PlantArchitecture ( - helios::Context *  - context_ptr) + helios::Context * context_ptr) @@ -342,66 +353,52 @@

uint PlantArchitecture::addBaseStemShoot ( - uint  - plantID, + uint plantID, - uint  - current_node_number, + uint current_node_number, - const AxisRotation &  - base_rotation, + const AxisRotation & base_rotation, - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - float  - radius_taper, + float radius_taper, - const std::string &  - shoot_type_label  - - - - ) - + const std::string & shoot_type_label )

-

Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has already been created using the addPlantInstance() method.

+

Define the stem/trunk shoot (base of plant) to start a new plant. This requires a plant instance has already been created using the addPlantInstance() method.

Parameters
@@ -412,7 +409,7 @@

[in]

- +
[in]plantIDID of the plant instance.
internode_length_scale_factor_fractionScaling factor of the maximum internode length to determine the actual initial internode length at the time of creation (=1 applies no scaling).
[in]leaf_scale_factor_fractionScaling factor of the leaf/petiole to determine the actual initial leaf size at the time of creation (=1 applies no scaling).
[in]radius_taperTapering factor of the internode radius along the shoot (0=constant radius, 1=linear taper to zero radius).
[in]shoot_type_labelLabel of the shoot type to be used for the base stem shoot. This requires that the shoot type has already been defined using the defineShootType() method.
[in]shoot_type_labelLabel of the shoot type to be used for the base stem shoot. This requires that the shoot type has already been defined using the defineShootType() method.
@@ -431,79 +428,62 @@

uint PlantArchitecture::addChildShoot ( - uint  - plantID, + uint plantID, - int  - parent_shoot_ID, + int parent_shoot_ID, - uint  - parent_node_index, + uint parent_node_index, - uint  - current_node_number, + uint current_node_number, - const AxisRotation &  - shoot_base_rotation, + const AxisRotation & shoot_base_rotation, - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - float  - radius_taper, + float radius_taper, - const std::string &  - shoot_type_label, + const std::string & shoot_type_label, - uint  - petiole_index = 0  - - - - ) - + uint petiole_index = 0 )

@@ -521,7 +501,7 @@

[in]internode_length_scale_factor_fractionScaling factor of the maximum internode length to determine the actual initial internode length at the time of creation (=1 applies no scaling). [in]leaf_scale_factor_fractionScaling factor of the leaf/petiole to determine the actual initial leaf size at the time of creation (=1 applies no scaling). [in]radius_taperTapering factor of the internode radius along the shoot (0=constant radius, 1=linear taper to zero radius). - [in]shoot_type_labelLabel of the shoot type to be used for the new shoot. This requires that the shoot type has already been defined using the defineShootType() method. + [in]shoot_type_labelLabel of the shoot type to be used for the new shoot. This requires that the shoot type has already been defined using the defineShootType() method. [in]petiole_index[OPTIONAL] Index of the petiole within the internode to which the new shoot will be attached (when there are multiple petioles per internode) @@ -541,73 +521,57 @@

uint PlantArchitecture::addEpicormicShoot ( - uint  - plantID, + uint plantID, - int  - parent_shoot_ID, + int parent_shoot_ID, - float  - parent_position_fraction, + float parent_position_fraction, - uint  - current_node_number, + uint current_node_number, - float  - zenith_perturbation_degrees, + float zenith_perturbation_degrees, - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - float  - radius_taper, + float radius_taper, - const std::string &  - shoot_type_label  - - - - ) - + const std::string & shoot_type_label )

@@ -625,7 +589,7 @@

[in]internode_length_scale_factor_fractionScaling factor of the maximum internode length to determine the actual initial internode length at the time of creation (=1 applies no scaling). [in]leaf_scale_factor_fractionScaling factor of the leaf/petiole to determine the actual initial leaf size at the time of creation (=1 applies no scaling). [in]radius_taperTapering factor of the internode radius along the shoot (0=constant radius, 1=linear taper to zero radius). - [in]shoot_type_labelLabel of the shoot type to be used for the new shoot. This requires that the shoot type has already been defined using the defineShootType() method. + [in]shoot_type_labelLabel of the shoot type to be used for the new shoot. This requires that the shoot type has already been defined using the defineShootType() method. @@ -644,19 +608,12 @@

uint PlantArchitecture::addPlantInstance ( - const helios::vec3 &  - base_position, + const helios::vec3 & base_position, - float  - current_age  - - - - ) - + float current_age )

@@ -684,8 +641,7 @@

void PlantArchitecture::advanceTime ( - float  - time_step_days) + float time_step_days) @@ -712,19 +668,12 @@

void PlantArchitecture::advanceTime ( - int  - time_step_years, + int time_step_years, - float  - time_step_days  - - - - ) - + float time_step_days )

@@ -751,19 +700,12 @@

void PlantArchitecture::advanceTime ( - uint  - plantID, + uint plantID, - float  - time_step_days  - - - - ) - + float time_step_days )

@@ -790,49 +732,37 @@

int PlantArchitecture::appendPhytomerToShoot ( - uint  - plantID, + uint plantID, - uint  - shootID, + uint shootID, - const PhytomerParameters &  - phytomer_parameters, + const PhytomerParameters & phytomer_parameters, - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction  - - - - ) - + float leaf_scale_factor_fraction )

@@ -865,67 +795,52 @@

uint PlantArchitecture::appendShoot ( - uint  - plantID, + uint plantID, - int  - parent_shoot_ID, + int parent_shoot_ID, - uint  - current_node_number, + uint current_node_number, - const AxisRotation &  - base_rotation, + const AxisRotation & base_rotation, - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - float  - radius_taper, + float radius_taper, - const std::string &  - shoot_type_label  - - - - ) - + const std::string & shoot_type_label )

@@ -942,7 +857,7 @@

[in]internode_length_scale_factor_fractionScaling factor of the maximum internode length to determine the actual initial internode length at the time of creation (=1 applies no scaling). [in]leaf_scale_factor_fractionScaling factor of the leaf/petiole to determine the actual initial leaf size at the time of creation (=1 applies no scaling). [in]radius_taperTapering factor of the internode radius along the shoot (0=constant radius, 1=linear taper to zero radius). - [in]shoot_type_labelLabel of the shoot type to be used for the new shoot. This requires that the shoot type has already been defined using the defineShootType() method. + [in]shoot_type_labelLabel of the shoot type to be used for the new shoot. This requires that the shoot type has already been defined using the defineShootType() method. @@ -961,8 +876,7 @@

void PlantArchitecture::breakPlantDormancy ( - uint  - plantID) + uint plantID) @@ -981,37 +895,27 @@

std::vector< uint > PlantArchitecture::buildPlantCanopyFromLibrary ( - const helios::vec3 &  - canopy_center_position, + const helios::vec3 & canopy_center_position, - const helios::vec2 &  - plant_spacing_xy, + const helios::vec2 & plant_spacing_xy, - const helios::int2 &  - plant_count_xy, + const helios::int2 & plant_count_xy, - float  - age, + float age, - float  - germination_rate = 1.f  - - - - ) - + float germination_rate = 1.f )

@@ -1042,19 +946,12 @@

uint PlantArchitecture::buildPlantInstanceFromLibrary ( - const helios::vec3 &  - base_position, + const helios::vec3 & base_position, - float  - age  - - - - ) - + float age )

@@ -1082,19 +979,12 @@

void PlantArchitecture::defineShootType ( - const std::string &  - shoot_type_label, + const std::string & shoot_type_label, - const ShootParameters &  - shoot_params  - - - - ) - + const ShootParameters & shoot_params )

@@ -1121,8 +1011,7 @@

void PlantArchitecture::deletePlantInstance ( - const std::vector< uint > &  - plantIDs) + const std::vector< uint > & plantIDs) @@ -1149,8 +1038,7 @@

void PlantArchitecture::deletePlantInstance ( - uint  - plantID) + uint plantID) @@ -1177,7 +1065,7 @@

void PlantArchitecture::disableInternodeContextBuild ( - ) + ) @@ -1198,7 +1086,7 @@

void PlantArchitecture::disablePeduncleContextBuild ( - ) + ) @@ -1219,7 +1107,7 @@

void PlantArchitecture::disablePetioleContextBuild ( - ) + ) @@ -1240,8 +1128,7 @@

void PlantArchitecture::disablePlantPhenology ( - uint  - plantID) + uint plantID) @@ -1260,31 +1147,22 @@

uint PlantArchitecture::duplicatePlantInstance ( - uint  - plantID, + uint plantID, - const helios::vec3 &  - base_position, + const helios::vec3 & base_position, - const AxisRotation &  - base_rotation, + const AxisRotation & base_rotation, - float  - current_age  - - - - ) - + float current_age )

@@ -1313,25 +1191,17 @@

void PlantArchitecture::enableEpicormicChildShoots ( - uint  - plantID, + uint plantID, - const std::string &  - epicormic_shoot_type_label, + const std::string & epicormic_shoot_type_label, - float  - epicormic_probability_perlength_perday  - - - - ) - + float epicormic_probability_perlength_perday )

@@ -1360,8 +1230,7 @@

void PlantArchitecture::enableGroundClipping ( - float  - ground_height = 0.f) + float ground_height = 0.f) @@ -1388,19 +1257,12 @@

uint PlantArchitecture::generatePlantFromString ( - const std::string &  - generation_string, + const std::string & generation_string, - const PhytomerParameters &  - phytomer_parameters  - - - - ) - + const PhytomerParameters & phytomer_parameters )

@@ -1418,19 +1280,12 @@

uint PlantArchitecture::generatePlantFromString ( - const std::string &  - generation_string, + const std::string & generation_string, - const std::map< std::string, PhytomerParameters > &  - phytomer_parameters  - - - - ) - + const std::map< std::string, PhytomerParameters > & phytomer_parameters )

@@ -1448,7 +1303,7 @@

std::vector< uint > PlantArchitecture::getAllFlowerUUIDs ( - ) + ) const @@ -1470,7 +1325,7 @@

std::vector< uint > PlantArchitecture::getAllFruitUUIDs ( - ) + ) const @@ -1492,7 +1347,7 @@

std::vector< uint > PlantArchitecture::getAllInternodeUUIDs ( - ) + ) const @@ -1514,7 +1369,7 @@

std::vector< uint > PlantArchitecture::getAllLeafUUIDs ( - ) + ) const @@ -1536,7 +1391,7 @@

std::vector< uint > PlantArchitecture::getAllObjectIDs ( - ) + ) const @@ -1558,7 +1413,7 @@

std::vector< uint > PlantArchitecture::getAllPeduncleUUIDs ( - ) + ) const @@ -1580,7 +1435,7 @@

std::vector< uint > PlantArchitecture::getAllPetioleUUIDs ( - ) + ) const @@ -1602,8 +1457,7 @@

std::vector< uint > PlantArchitecture::getAllPlantObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1631,8 +1485,7 @@

std::vector< uint > PlantArchitecture::getAllPlantUUIDs ( - uint  - plantID) + uint plantID) const @@ -1660,7 +1513,7 @@

std::vector< uint > PlantArchitecture::getAllUUIDs ( - ) + ) const @@ -1682,7 +1535,7 @@

std::map< std::string, PhytomerParameters > PlantArchitecture::getCurrentPhytomerParameters ( - ) + ) @@ -1704,7 +1557,7 @@

std::map< std::string, ShootParameters > PlantArchitecture::getCurrentShootParameters ( - ) + ) @@ -1726,8 +1579,7 @@

ShootParameters PlantArchitecture::getCurrentShootParameters ( - const std::string &  - shoot_type_label) + const std::string & shoot_type_label) @@ -1755,8 +1607,7 @@

float PlantArchitecture::getPlantAge ( - uint  - plantID) + uint plantID) const @@ -1775,8 +1626,7 @@

helios::vec3 PlantArchitecture::getPlantBasePosition ( - uint  - plantID) + uint plantID) const @@ -1795,8 +1645,7 @@

std::vector< uint > PlantArchitecture::getPlantFlowerObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1824,8 +1673,7 @@

std::vector< uint > PlantArchitecture::getPlantFruitObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1853,8 +1701,7 @@

std::vector< uint > PlantArchitecture::getPlantInternodeObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1882,8 +1729,7 @@

std::vector< uint > PlantArchitecture::getPlantLeafObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1911,8 +1757,7 @@

std::vector< uint > PlantArchitecture::getPlantPeduncleObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1940,8 +1785,7 @@

std::vector< uint > PlantArchitecture::getPlantPetioleObjectIDs ( - uint  - plantID) + uint plantID) const @@ -1969,8 +1813,7 @@

std::string PlantArchitecture::getPlantString ( - uint  - plantID) + uint plantID) const @@ -1989,19 +1832,12 @@

uint PlantArchitecture::getShootNodeCount ( - uint  - plantID, + uint plantID, - uint  - shootID  - - - - ) - const + uint shootID ) const

@@ -2019,19 +1855,12 @@

float PlantArchitecture::getShootTaper ( - uint  - plantID, + uint plantID, - uint  - shootID  - - - - ) - const + uint shootID ) const

@@ -2049,8 +1878,7 @@

void PlantArchitecture::harvestPlant ( - uint  - plantID) + uint plantID) @@ -2069,31 +1897,22 @@

void PlantArchitecture::incrementPhytomerInternodeGirth ( - uint  - plantID, + uint plantID, - uint  - shootID, + uint shootID, - uint  - node_number, + uint node_number, - bool  - update_context_geometry  - - - - ) - + bool update_context_geometry )

@@ -2111,19 +1930,12 @@

void PlantArchitecture::initializePlantCarbohydratePool ( - uint  - plantID, + uint plantID, - float  - carbohydrate_concentration_molC_m3  - - - - ) - + float carbohydrate_concentration_molC_m3 )

@@ -2141,25 +1953,17 @@

void PlantArchitecture::initializeShootCarbohydratePool ( - uint  - plantID, + uint plantID, - uint  - shootID, + uint shootID, - float  - carbohydrate_concentration_molC_m3  - - - - ) - + float carbohydrate_concentration_molC_m3 )

@@ -2177,8 +1981,7 @@

void PlantArchitecture::loadPlantModelFromLibrary ( - const std::string &  - plant_label) + const std::string & plant_label) @@ -2205,8 +2008,7 @@

void PlantArchitecture::makePlantDormant ( - uint  - plantID) + uint plantID) @@ -2225,8 +2027,7 @@

void PlantArchitecture::optionalOutputObjectData ( - const std::string &  - object_data_label) + const std::string & object_data_label) @@ -2253,8 +2054,7 @@

void PlantArchitecture::optionalOutputObjectData ( - const std::vector< std::string > &  - object_data_labels) + const std::vector< std::string > & object_data_labels) @@ -2281,19 +2081,12 @@

std::vector< uint > PlantArchitecture::readPlantStructureXML ( - const std::string &  - filename, + const std::string & filename, - bool  - quiet = false  - - - - ) - + bool quiet = false )

@@ -2311,8 +2104,7 @@

void PlantArchitecture::removePlantLeaves ( - uint  - plantID) + uint plantID) @@ -2331,19 +2123,12 @@

void PlantArchitecture::removeShootLeaves ( - uint  - plantID, + uint plantID, - uint  - shootID  - - - - ) - + uint shootID )

@@ -2364,7 +2149,7 @@

int PlantArchitecture::selfTest ( - ) + ) @@ -2390,31 +2175,22 @@

void PlantArchitecture::setPhytomerLeafScale ( - uint  - plantID, + uint plantID, - uint  - shootID, + uint shootID, - uint  - node_number, + uint node_number, - float  - leaf_scale_factor_fraction  - - - - ) - + float leaf_scale_factor_fraction )

@@ -2432,19 +2208,12 @@

void PlantArchitecture::setPlantAge ( - uint  - plantID, + uint plantID, - float  - current_age  - - - - ) - + float current_age )

@@ -2462,19 +2231,12 @@

void PlantArchitecture::setPlantBasePosition ( - uint  - plantID, + uint plantID, - const helios::vec3 &  - base_position  - - - - ) - + const helios::vec3 & base_position )

@@ -2492,61 +2254,47 @@

void PlantArchitecture::setPlantPhenologicalThresholds ( - uint  - plantID, + uint plantID, - float  - time_to_dormancy_break, + float time_to_dormancy_break, - float  - time_to_flower_initiation, + float time_to_flower_initiation, - float  - time_to_flower_opening, + float time_to_flower_opening, - float  - time_to_fruit_set, + float time_to_fruit_set, - float  - time_to_fruit_maturity, + float time_to_fruit_maturity, - float  - time_to_dormancy, + float time_to_dormancy, - float  - max_leaf_lifespan = 1e6, + float max_leaf_lifespan = 1e6, - bool  - is_evergreen = false  - - - - ) - + bool is_evergreen = false )

@@ -2581,8 +2329,7 @@

float PlantArchitecture::sumPlantLeafArea ( - uint  - plantID) + uint plantID) const @@ -2610,8 +2357,7 @@

void PlantArchitecture::updateCurrentShootParameters ( - const std::map< std::string, ShootParameters > &  - params) + const std::map< std::string, ShootParameters > & params) @@ -2640,19 +2386,12 @@

void PlantArchitecture::updateCurrentShootParameters ( - const std::string &  - shoot_type_label, + const std::string & shoot_type_label, - const ShootParameters &  - params  - - - - ) - + const ShootParameters & params )

@@ -2680,19 +2419,12 @@

void PlantArchitecture::writePlantStructureXML ( - uint  - plantID, + uint plantID, - const std::string &  - filename  - - - - ) - const + const std::string & filename ) const

@@ -2701,7 +2433,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ Phytomer

@@ -2761,7 +2493,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_radiation_model.html b/doc/html/class_radiation_model.html index b6182ab5b..83e9fd772 100644 --- a/doc/html/class_radiation_model.html +++ b/doc/html/class_radiation_model.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -92,309 +104,309 @@

Radiation transport model plugin. - More...

+ More...

#include <RadiationModel.h>

- + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 RadiationModel (helios::Context *context)
 RadiationModel (helios::Context *context)
 Default constructor.
 
 ~RadiationModel ()
 ~RadiationModel ()
 Destructor.
 
int selfTest ()
int selfTest ()
 Self-test.
 
void disableMessages ()
void disableMessages ()
 Disable/silence status messages.
 
void enableMessages ()
void enableMessages ()
 Enable status messages.
 
void optionalOutputPrimitiveData (const char *label)
void optionalOutputPrimitiveData (const char *label)
 Add optional output primitive data values to the Context.
 
void setDirectRayCount (const std::string &label, size_t N)
void setDirectRayCount (const std::string &label, size_t N)
 Sets variable directRayCount, the number of rays to be used in direct radiation model.
 
void setDiffuseRayCount (const std::string &label, size_t N)
void setDiffuseRayCount (const std::string &label, size_t N)
 Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
 
void setDiffuseRadiationFlux (const std::string &label, float flux)
void setDiffuseRadiationFlux (const std::string &label, float flux)
 Diffuse (ambient) radiation flux.
 
void setDiffuseRadiationExtinctionCoeff (const std::string &label, float K, const helios::vec3 &peak_dir)
void setDiffuseRadiationExtinctionCoeff (const std::string &label, float K, const helios::vec3 &peak_dir)
 Extinction coefficient of diffuse ambient radiation.
 
void setDiffuseRadiationExtinctionCoeff (const std::string &label, float K, const helios::SphericalCoord &peak_dir)
void setDiffuseRadiationExtinctionCoeff (const std::string &label, float K, const helios::SphericalCoord &peak_dir)
 Extinction coefficient of diffuse ambient radiation.
 
void setDiffuseSpectrumIntegral (float spectrum_integral)
void setDiffuseSpectrumIntegral (float spectrum_integral)
 Set the integral of the diffuse spectral flux distribution across all possible wavelengths FOR ALL EXISTING BANDS (=∫Sdλ)
 
void setDiffuseSpectrumIntegral (float spectrum_integral, float wavelength1, float wavelength2)
void setDiffuseSpectrumIntegral (float spectrum_integral, float wavelength1, float wavelength2)
 Scale the source spectral flux distribution based on a prescribed integral between two wavelengths FOR ALL EXISTING BANDS (=∫Sdλ)
 
void setDiffuseSpectrumIntegral (const std::string &band_label, float spectrum_integral)
void setDiffuseSpectrumIntegral (const std::string &band_label, float spectrum_integral)
 Set the integral of the diffuse spectral flux distribution across all possible wavelengths (=∫Sdλ)
 
void setDiffuseSpectrumIntegral (const std::string &band_label, float spectrum_integral, float wavelength1, float wavelength2)
void setDiffuseSpectrumIntegral (const std::string &band_label, float spectrum_integral, float wavelength1, float wavelength2)
 Scale the source spectral flux distribution based on a prescribed integral between two wavelengths (=∫Sdλ)
 
void addRadiationBand (const std::string &label)
void addRadiationBand (const std::string &label)
 Add a spectral radiation band to the model.
 
void addRadiationBand (const std::string &label, float wavelength_min, float wavelength_max)
void addRadiationBand (const std::string &label, float wavelength_min, float wavelength_max)
 Add a spectral radiation band to the model with explicit specification of the spectral wave band.
 
void copyRadiationBand (const std::string &old_label, const std::string &new_label)
void copyRadiationBand (const std::string &old_label, const std::string &new_label)
 Copy a spectral radiation band based on a previously created band.
 
void copyRadiationBand (const std::string &old_label, const std::string &new_label, float wavelength_min, float wavelength_max)
void copyRadiationBand (const std::string &old_label, const std::string &new_label, float wavelength_min, float wavelength_max)
 Copy a spectral radiation band based on a previously created band and explicitly set new band wavelength range.
 
bool doesBandExist (const std::string &label) const
bool doesBandExist (const std::string &label) const
 Check if a radiation band exists based on its label.
 
void disableEmission (const std::string &label)
void disableEmission (const std::string &label)
 Disable emission calculations for all primitives in this band.
 
void enableEmission (const std::string &label)
void enableEmission (const std::string &label)
 Enable emission calculations for all primitives in this band.
 
uint addCollimatedRadiationSource ()
uint addCollimatedRadiationSource ()
 Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays) assuming the default direction of (0,0,1)
 
uint addCollimatedRadiationSource (const helios::SphericalCoord &direction)
uint addCollimatedRadiationSource (const helios::SphericalCoord &direction)
 Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)
 
uint addCollimatedRadiationSource (const helios::vec3 &direction)
uint addCollimatedRadiationSource (const helios::vec3 &direction)
 Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)
 
uint addSphereRadiationSource (const helios::vec3 &position, float radius)
uint addSphereRadiationSource (const helios::vec3 &position, float radius)
 Add an external source of radiation that emits from the surface of a sphere.
 
uint addSunSphereRadiationSource ()
uint addSunSphereRadiationSource ()
 Add a sphere radiation source that models the sun assuming the default direction of (0,0,1)
 
uint addSunSphereRadiationSource (const helios::SphericalCoord &sun_direction)
uint addSunSphereRadiationSource (const helios::SphericalCoord &sun_direction)
 Add a sphere radiation source that models the sun.
 
uint addSunSphereRadiationSource (const helios::vec3 &sun_direction)
uint addSunSphereRadiationSource (const helios::vec3 &sun_direction)
 Add a sphere radiation source that models the sun.
 
uint addRectangleRadiationSource (const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
uint addRectangleRadiationSource (const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
 Add planar rectangular radiation source.
 
uint addDiskRadiationSource (const helios::vec3 &position, float radius, const helios::vec3 &rotation)
uint addDiskRadiationSource (const helios::vec3 &position, float radius, const helios::vec3 &rotation)
 Add planar circular radiation source.
 
void deleteRadiationSource (uint sourceID)
void deleteRadiationSource (uint sourceID)
 Delete an existing radiation source (any type)
 
void setSourceSpectrumIntegral (uint source_ID, float source_integral)
void setSourceSpectrumIntegral (uint source_ID, float source_integral)
 Set the integral of the source spectral flux distribution across all possible wavelengths (=∫Sdλ)
 
void setSourceSpectrumIntegral (uint source_ID, float source_integral, float wavelength1, float wavelength2)
void setSourceSpectrumIntegral (uint source_ID, float source_integral, float wavelength1, float wavelength2)
 Scale the source spectral flux distribution based on a prescribed integral between two wavelengths (=∫Sdλ)
 
void setSourceFlux (uint source_ID, const std::string &band_label, float flux)
void setSourceFlux (uint source_ID, const std::string &band_label, float flux)
 Set the flux of radiation source for this band.
 
void setSourceFlux (const std::vector< uint > &source_ID, const std::string &band_label, float flux)
void setSourceFlux (const std::vector< uint > &source_ID, const std::string &band_label, float flux)
 Set the flux of multiple radiation sources for this band.
 
float getSourceFlux (uint source_ID, const std::string &band_label) const
float getSourceFlux (uint source_ID, const std::string &band_label) const
 Get the flux of radiation source for this band.
 
void setSourcePosition (uint source_ID, const helios::vec3 &position)
void setSourcePosition (uint source_ID, const helios::vec3 &position)
 Set the position/direction of radiation source based on a Cartesian vector.
 
void setSourcePosition (uint source_ID, const helios::SphericalCoord &position)
void setSourcePosition (uint source_ID, const helios::SphericalCoord &position)
 Set the position/direction of radiation source based on a spherical vector.
 
helios::vec3 getSourcePosition (uint source_ID) const
helios::vec3 getSourcePosition (uint source_ID) const
 Get the position/direction of radiation source.
 
void setSourceSpectrum (uint source_ID, const std::vector< helios::vec2 > &spectrum)
void setSourceSpectrum (uint source_ID, const std::vector< helios::vec2 > &spectrum)
 Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pairs.
 
void setSourceSpectrum (const std::vector< uint > &source_ID, const std::vector< helios::vec2 > &spectrum)
void setSourceSpectrum (const std::vector< uint > &source_ID, const std::vector< helios::vec2 > &spectrum)
 Set the spectral distribution of multiple radiation sources according to a vector of wavelength-intensity pairs.
 
void setSourceSpectrum (uint source_ID, const std::string &spectrum_label)
void setSourceSpectrum (uint source_ID, const std::string &spectrum_label)
 Set the spectral distribution of a radiation source based on global data of wavelength-intensity pairs.
 
void setSourceSpectrum (const std::vector< uint > &source_ID, const std::string &spectrum_label)
void setSourceSpectrum (const std::vector< uint > &source_ID, const std::string &spectrum_label)
 Set the spectral distribution of multiple radiation sources based on global data of wavelength-intensity pairs.
 
void setDiffuseSpectrum (const std::string &spectrum_label)
void setDiffuseSpectrum (const std::string &spectrum_label)
 Set the spectral distribution of diffuse ambient radiation FOR ALL BANDS based on global data of wavelength-intensity pairs.
 
void setDiffuseSpectrum (const std::string &band_label, const std::string &spectrum_label)
void setDiffuseSpectrum (const std::string &band_label, const std::string &spectrum_label)
 Set the spectral distribution of diffuse ambient radiation FOR A SINGLE BANDS based on global data of wavelength-intensity pairs.
 
float getDiffuseFlux (const std::string &band_label) const
float getDiffuseFlux (const std::string &band_label) const
 Get the diffuse flux for a given band.
 
void enableLightModelVisualization ()
void enableLightModelVisualization ()
 Add a 3D model of the light source (rectangular, disk, and sphere) to the Context for visualization purposes.
 
void disableLightModelVisualization ()
void disableLightModelVisualization ()
 Remove the 3D model of the light source from the Context.
 
void enableCameraModelVisualization ()
void enableCameraModelVisualization ()
 Add a 3D model of the camera to the Context for visualization purposes.
 
void disableCameraModelVisualization ()
void disableCameraModelVisualization ()
 Remove the 3D model of the camera from the Context.
 
float integrateSpectrum (const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
float integrateSpectrum (const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
 Integrate a spectral distribution between two wavelength bounds.
 
float integrateSpectrum (const std::vector< helios::vec2 > &object_spectrum) const
float integrateSpectrum (const std::vector< helios::vec2 > &object_spectrum) const
 Integrate a spectral distribution across all wavelengths.
 
float integrateSpectrum (uint source_ID, const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
float integrateSpectrum (uint source_ID, const std::vector< helios::vec2 > &object_spectrum, float wavelength1, float wavelength2) const
 Integrate the product of a radiation source spectral distribution with specified spectral data between two wavelength bounds.
 
float integrateSpectrum (uint source_ID, const std::vector< helios::vec2 > &object_spectrum, const std::vector< helios::vec2 > &camera_spectrum) const
float integrateSpectrum (uint source_ID, const std::vector< helios::vec2 > &object_spectrum, const std::vector< helios::vec2 > &camera_spectrum) const
 Integrate the product of a radiation source spectral distribution, surface spectral data, and camera spectral response across all wavelengths.
 
float integrateSpectrum (const std::vector< helios::vec2 > &object_spectrum, const std::vector< helios::vec2 > &camera_spectrum) const
float integrateSpectrum (const std::vector< helios::vec2 > &object_spectrum, const std::vector< helios::vec2 > &camera_spectrum) const
 Integrate the product of surface spectral data and camera spectral response across all wavelengths.
 
float integrateSourceSpectrum (uint source_ID, float wavelength1, float wavelength2) const
float integrateSourceSpectrum (uint source_ID, float wavelength1, float wavelength2) const
 Integrate a source spectral distribution between two wavelength bounds.
 
void scaleSpectrum (const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor) const
void scaleSpectrum (const std::string &existing_global_data_label, const std::string &new_global_data_label, float scale_factor) const
 Scale an entire spectrum by a constant factor. Creates new global data for scaled spectrum.
 
void scaleSpectrum (const std::string &global_data_label, float scale_factor) const
void scaleSpectrum (const std::string &global_data_label, float scale_factor) const
 Scale an entire spectrum by a constant factor. Performs scaling in-place.
 
void scaleSpectrumRandomly (const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor) const
void scaleSpectrumRandomly (const std::string &existing_global_data_label, const std::string &new_global_data_label, float minimum_scale_factor, float maximum_scale_factor) const
 Scale an entire spectrum by a random factor following a uniform distribution.
 
void blendSpectra (const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels, const std::vector< float > &weights) const
void blendSpectra (const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels, const std::vector< float > &weights) const
 Blend one or more spectra together into a new spectrum.
 
void blendSpectraRandomly (const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels) const
void blendSpectraRandomly (const std::string &new_spectrum_label, const std::vector< std::string > &spectrum_labels) const
 Blend one or more spectra together into a new spectrum, with random weights assigned to each input spectrum.
 
void setScatteringDepth (const std::string &label, uint depth)
void setScatteringDepth (const std::string &label, uint depth)
 Set the number of scattering iterations for a certain band.
 
void setMinScatterEnergy (const std::string &label, uint energy)
void setMinScatterEnergy (const std::string &label, uint energy)
 Set the energy threshold used to terminate scattering iterations. Scattering iterations are terminated when the maximum to-be-scattered energy among all primitives is less than "energy".
 
void enforcePeriodicBoundary (const std::string &boundary)
void enforcePeriodicBoundary (const std::string &boundary)
 Use a periodic boundary condition in one or more lateral directions.
 
void addRadiationCamera (const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
void addRadiationCamera (const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
 Add a radiation camera sensor.
 
void addRadiationCamera (const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::SphericalCoord &viewing_direction, const CameraProperties &camera_properties, uint antialiasing_samples)
void addRadiationCamera (const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::SphericalCoord &viewing_direction, const CameraProperties &camera_properties, uint antialiasing_samples)
 Add a radiation camera sensor.
 
void setCameraSpectralResponse (const std::string &camera_label, const std::string &band_label, const std::string &global_data)
void setCameraSpectralResponse (const std::string &camera_label, const std::string &band_label, const std::string &global_data)
 Set the spectral response of a camera band based on reference to global data. This function version uses all the global data array to calculate the spectral response.
 
void setCameraPosition (const std::string &camera_label, const helios::vec3 &position)
void setCameraPosition (const std::string &camera_label, const helios::vec3 &position)
 Set the position of the radiation camera.
 
helios::vec3 getCameraPosition (const std::string &camera_label) const
helios::vec3 getCameraPosition (const std::string &camera_label) const
 Get the position of the radiation camera.
 
void setCameraLookat (const std::string &camera_label, const helios::vec3 &lookat)
void setCameraLookat (const std::string &camera_label, const helios::vec3 &lookat)
 Set the position the radiation camera is pointed toward (used to calculate camera orientation)
 
helios::vec3 getCameraLookat (const std::string &camera_label) const
helios::vec3 getCameraLookat (const std::string &camera_label) const
 Get the position the radiation camera is pointed toward (used to calculate camera orientation)
 
void setCameraOrientation (const std::string &camera_label, const helios::vec3 &direction)
void setCameraOrientation (const std::string &camera_label, const helios::vec3 &direction)
 Set the orientation of the radiation camera based on a Cartesian vector.
 
void setCameraOrientation (const std::string &camera_label, const helios::SphericalCoord &direction)
void setCameraOrientation (const std::string &camera_label, const helios::SphericalCoord &direction)
 Set the orientation of the radiation camera based on a spherical coordinate.
 
helios::SphericalCoord getCameraOrientation (const std::string &camera_label) const
helios::SphericalCoord getCameraOrientation (const std::string &camera_label) const
 Get the orientation of the radiation camera based on a spherical coordinate.
 
std::vector< std::string > getAllCameraLabels ()
std::vector< std::string > getAllCameraLabels ()
 Get the labels for all radiation cameras that have been added to the radiation model.
 
void updateGeometry ()
void updateGeometry ()
 Adds all geometric primitives from the Context to OptiX.
 
void updateGeometry (const std::vector< uint > &UUIDs)
void updateGeometry (const std::vector< uint > &UUIDs)
 Adds certain geometric primitives from the Context to OptiX as specified by a list of UUIDs.
 
void runBand (const std::string &label)
void runBand (const std::string &label)
 Run the simulation for a single radiative band.
 
void runBand (const std::vector< std::string > &labels)
void runBand (const std::vector< std::string > &labels)
 Run the simulation for a multiple radiative bands.
 
std::vector< float > getTotalAbsorbedFlux ()
std::vector< float > getTotalAbsorbedFlux ()
 Get the total absorbed radiation flux summed over all bands for each primitive.
 
float getSkyEnergy ()
float getSkyEnergy ()
 Get the radiative energy lost to the sky (surroundings)
 
float calculateGtheta (helios::Context *context, helios::vec3 view_direction)
float calculateGtheta (helios::Context *context, helios::vec3 view_direction)
 Calculate G(theta) (i.e., projected area fraction) for a group of primitives given a certain viewing direction.
 
void setCameraCalibration (CameraCalibration *CameraCalibration)
void setCameraCalibration (CameraCalibration *CameraCalibration)
 
void updateCameraResponse (const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels_raw, const std::vector< std::string > &cameraresponselabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
void updateCameraResponse (const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels_raw, const std::vector< std::string > &cameraresponselabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
 Update the camera response for a given camera based on color board.
 
float getCameraResponseScale (const std::string &orginalcameralabel, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &sourcelabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues)
float getCameraResponseScale (const std::string &orginalcameralabel, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &sourcelabels, helios::vec2 &wavelengthrange, const std::vector< std::vector< float > > &truevalues)
 Get the scale factor of the camera response for a given camera.
 
void runRadiationImaging (const std::string &cameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
void runRadiationImaging (const std::string &cameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
 Run radiation imaging simulation.
 
void runRadiationImaging (const std::vector< std::string > &cameralabels, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
void runRadiationImaging (const std::vector< std::string > &cameralabels, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &bandlabels, const std::vector< std::string > &cameraresponselabels, helios::vec2 wavelengthrange, float fluxscale=1, float diffusefactor=0.0005, uint scatteringdepth=4)
 Run radiation imaging simulation.
 
void writeCameraImage (const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float flux_to_pixel_conversion=1.f)
void writeCameraImage (const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float flux_to_pixel_conversion=1.f)
 Write camera data for one or more bands to a JPEG image.
 
void writeNormCameraImage (const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
void writeNormCameraImage (const std::string &camera, const std::vector< std::string > &bands, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
 Write normalized camera data (maximum value is 1) for one or more bands to a JPEG image.
 
void writeCameraImageData (const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
void writeCameraImageData (const std::string &camera, const std::string &band, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
 Write camera data for one band to an ASCII text file.
 
void writePrimitiveDataLabelMap (const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
void writePrimitiveDataLabelMap (const std::string &cameralabel, const std::string &primitive_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
 Write image pixel labels to text file based on primitive data. Primitive data must have type 'float', 'double', 'uint', or 'int'.
 
void writeObjectDataLabelMap (const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
void writeObjectDataLabelMap (const std::string &cameralabel, const std::string &object_data_label, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1, float padvalue=NAN)
 Write image pixel labels to text file based on object data. Object data must have type 'float', 'double', 'uint', or 'int'.
 
void writeDepthImageData (const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
void writeDepthImageData (const std::string &cameralabel, const std::string &imagefile_base, const std::string &image_path="./", int frame=-1)
 Write depth image data to text file.
 
void writeNormDepthImage (const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path="./", int frame=-1)
void writeNormDepthImage (const std::string &cameralabel, const std::string &imagefile_base, float max_depth, const std::string &image_path="./", int frame=-1)
 Write depth image file, with grayscale normalized to the minimum and maximum depth values.
 
void writeImageBoundingBoxes (const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
void writeImageBoundingBoxes (const std::string &cameralabel, const std::string &primitive_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
 Write bounding boxes based on primitive data labels (Ultralytic's YOLO format). Primitive data must have type of 'uint' or 'int'.
 
void writeImageBoundingBoxes_ObjectData (const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
void writeImageBoundingBoxes_ObjectData (const std::string &cameralabel, const std::string &object_data_label, uint object_class_ID, const std::string &imagefile_base, const std::string &image_path="./", bool append_label_file=false, int frame=-1)
 Write bounding boxes based on object data labels (Ultralytic's YOLO format). Object data must have type of 'uint' or 'int'.
 
void setPadValue (const std::string &cameralabel, const std::vector< std::string > &bandlabels, const std::vector< float > &padvalues)
void setPadValue (const std::string &cameralabel, const std::vector< std::string > &bandlabels, const std::vector< float > &padvalues)
 Set padding value for pixels do not have valid values.
 
void calibrateCamera (const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
void calibrateCamera (const std::string &orginalcameralabel, const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameraresponselabels, const std::vector< std::string > &bandlabels, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
 Calibrate camera.
 
void calibrateCamera (const std::string &originalcameralabel, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
void calibrateCamera (const std::string &originalcameralabel, const float scalefactor, const std::vector< std::vector< float > > &truevalues, const std::string &calibratedmark)
 Calibrate camera.
 
@@ -415,8 +427,7 @@

RadiationModel::RadiationModel ( - helios::Context *  - context) + helios::Context * context) @@ -442,7 +453,7 @@

RadiationModel::~RadiationModel ( - ) + ) @@ -464,7 +475,7 @@

uint RadiationModel::addCollimatedRadiationSource ( - ) + ) @@ -486,8 +497,7 @@

uint RadiationModel::addCollimatedRadiationSource ( - const helios::SphericalCoord &  - direction) + const helios::SphericalCoord & direction) @@ -515,8 +525,7 @@

uint RadiationModel::addCollimatedRadiationSource ( - const helios::vec3 &  - direction) + const helios::vec3 & direction) @@ -544,25 +553,17 @@

uint RadiationModel::addDiskRadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - float  - radius, + float radius, - const helios::vec3 &  - rotation  - - - - ) - + const helios::vec3 & rotation )

@@ -591,8 +592,7 @@

void RadiationModel::addRadiationBand ( - const std::string &  - label) + const std::string & label) @@ -620,25 +620,17 @@

void RadiationModel::addRadiationBand ( - const std::string &  - label, + const std::string & label, - float  - wavelength_min, + float wavelength_min, - float  - wavelength_max  - - - - ) - + float wavelength_max )

@@ -666,43 +658,32 @@

void RadiationModel::addRadiationCamera ( - const std::string &  - camera_label, + const std::string & camera_label, - const std::vector< std::string > &  - band_label, + const std::vector< std::string > & band_label, - const helios::vec3 &  - position, + const helios::vec3 & position, - const helios::SphericalCoord &  - viewing_direction, + const helios::SphericalCoord & viewing_direction, - const CameraProperties &  - camera_properties, + const CameraProperties & camera_properties, - uint  - antialiasing_samples  - - - - ) - + uint antialiasing_samples )

@@ -733,43 +714,32 @@

void RadiationModel::addRadiationCamera ( - const std::string &  - camera_label, + const std::string & camera_label, - const std::vector< std::string > &  - band_label, + const std::vector< std::string > & band_label, - const helios::vec3 &  - position, + const helios::vec3 & position, - const helios::vec3 &  - lookat, + const helios::vec3 & lookat, - const CameraProperties &  - camera_properties, + const CameraProperties & camera_properties, - uint  - antialiasing_samples  - - - - ) - + uint antialiasing_samples )

@@ -800,25 +770,17 @@

uint RadiationModel::addRectangleRadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::vec3 &  - rotation  - - - - ) - + const helios::vec3 & rotation )

@@ -847,19 +809,12 @@

uint RadiationModel::addSphereRadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - float  - radius  - - - - ) - + float radius )

@@ -888,7 +843,7 @@

uint RadiationModel::addSunSphereRadiationSource ( - ) + ) @@ -910,8 +865,7 @@

uint RadiationModel::addSunSphereRadiationSource ( - const helios::SphericalCoord &  - sun_direction) + const helios::SphericalCoord & sun_direction) @@ -939,8 +893,7 @@

uint RadiationModel::addSunSphereRadiationSource ( - const helios::vec3 &  - sun_direction) + const helios::vec3 & sun_direction) @@ -968,25 +921,17 @@

void RadiationModel::blendSpectra ( - const std::string &  - new_spectrum_label, + const std::string & new_spectrum_label, - const std::vector< std::string > &  - spectrum_labels, + const std::vector< std::string > & spectrum_labels, - const std::vector< float > &  - weights  - - - - ) - const + const std::vector< float > & weights ) const

@@ -1015,19 +960,12 @@

void RadiationModel::blendSpectraRandomly ( - const std::string &  - new_spectrum_label, + const std::string & new_spectrum_label, - const std::vector< std::string > &  - spectrum_labels  - - - - ) - const + const std::vector< std::string > & spectrum_labels ) const

@@ -1055,19 +993,12 @@

float RadiationModel::calculateGtheta ( - helios::Context *  - context, + helios::Context * context, - helios::vec3  - view_direction  - - - - ) - + helios::vec3 view_direction )

@@ -1095,49 +1026,37 @@

void RadiationModel::calibrateCamera ( - const std::string &  - orginalcameralabel, + const std::string & orginalcameralabel, - const std::vector< std::string > &  - sourcelabels, + const std::vector< std::string > & sourcelabels, - const std::vector< std::string > &  - cameraresponselabels, + const std::vector< std::string > & cameraresponselabels, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const float  - scalefactor, + const float scalefactor, - const std::vector< std::vector< float > > &  - truevalues, + const std::vector< std::vector< float > > & truevalues, - const std::string &  - calibratedmark  - - - - ) - + const std::string & calibratedmark )

@@ -1170,31 +1089,22 @@

void RadiationModel::calibrateCamera ( - const std::string &  - originalcameralabel, + const std::string & originalcameralabel, - const float  - scalefactor, + const float scalefactor, - const std::vector< std::vector< float > > &  - truevalues, + const std::vector< std::vector< float > > & truevalues, - const std::string &  - calibratedmark  - - - - ) - + const std::string & calibratedmark )

@@ -1224,19 +1134,12 @@

void RadiationModel::copyRadiationBand ( - const std::string &  - old_label, + const std::string & old_label, - const std::string &  - new_label  - - - - ) - + const std::string & new_label )

@@ -1263,31 +1166,22 @@

void RadiationModel::copyRadiationBand ( - const std::string &  - old_label, + const std::string & old_label, - const std::string &  - new_label, + const std::string & new_label, - float  - wavelength_min, + float wavelength_min, - float  - wavelength_max  - - - - ) - + float wavelength_max )

@@ -1316,8 +1210,7 @@

void RadiationModel::deleteRadiationSource ( - uint  - sourceID) + uint sourceID) @@ -1344,7 +1237,7 @@

void RadiationModel::disableCameraModelVisualization ( - ) + ) @@ -1365,8 +1258,7 @@

void RadiationModel::disableEmission ( - const std::string &  - label) + const std::string & label) @@ -1393,7 +1285,7 @@

void RadiationModel::disableLightModelVisualization ( - ) + ) @@ -1414,7 +1306,7 @@

void RadiationModel::disableMessages ( - ) + ) @@ -1436,8 +1328,7 @@

bool RadiationModel::doesBandExist ( - const std::string &  - label) + const std::string & label) const @@ -1464,7 +1355,7 @@

void RadiationModel::enableCameraModelVisualization ( - ) + ) @@ -1485,8 +1376,7 @@

void RadiationModel::enableEmission ( - const std::string &  - label) + const std::string & label) @@ -1513,7 +1403,7 @@

void RadiationModel::enableLightModelVisualization ( - ) + ) @@ -1534,7 +1424,7 @@

void RadiationModel::enableMessages ( - ) + ) @@ -1555,8 +1445,7 @@

void RadiationModel::enforcePeriodicBoundary ( - const std::string &  - boundary) + const std::string & boundary) @@ -1569,7 +1458,7 @@

Note
This method should be called prior to calling RadiationModel::updateGeometry(), otherwise the boundary condition will not be enforced.
+
Note
This method should be called prior to calling RadiationModel::updateGeometry(), otherwise the boundary condition will not be enforced.

Definition at line 1150 of file RadiationModel.cpp.

@@ -1584,7 +1473,7 @@

std::vector< std::string > RadiationModel::getAllCameraLabels ( - ) + ) @@ -1606,8 +1495,7 @@

helios::vec3 RadiationModel::getCameraLookat ( - const std::string &  - camera_label) + const std::string & camera_label) const @@ -1635,8 +1523,7 @@

helios::SphericalCoord RadiationModel::getCameraOrientation ( - const std::string &  - camera_label) + const std::string & camera_label) const @@ -1664,8 +1551,7 @@

helios::vec3 RadiationModel::getCameraPosition ( - const std::string &  - camera_label) + const std::string & camera_label) const @@ -1693,43 +1579,32 @@

float RadiationModel::getCameraResponseScale ( - const std::string &  - orginalcameralabel, + const std::string & orginalcameralabel, - const std::vector< std::string > &  - cameraresponselabels, + const std::vector< std::string > & cameraresponselabels, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const std::vector< std::string > &  - sourcelabels, + const std::vector< std::string > & sourcelabels, - helios::vec2 &  - wavelengthrange, + helios::vec2 & wavelengthrange, - const std::vector< std::vector< float > > &  - truevalues  - - - - ) - + const std::vector< std::vector< float > > & truevalues )

@@ -1761,8 +1636,7 @@

float RadiationModel::getDiffuseFlux ( - const std::string &  - band_label) + const std::string & band_label) const @@ -1790,7 +1664,7 @@

float RadiationModel::getSkyEnergy ( - ) + ) @@ -1811,19 +1685,12 @@

float RadiationModel::getSourceFlux ( - uint  - source_ID, + uint source_ID, - const std::string &  - band_label  - - - - ) - const + const std::string & band_label ) const

@@ -1851,8 +1718,7 @@

helios::vec3 RadiationModel::getSourcePosition ( - uint  - source_ID) + uint source_ID) const @@ -1880,7 +1746,7 @@

std::vector< float > RadiationModel::getTotalAbsorbedFlux ( - ) + ) @@ -1901,25 +1767,17 @@

float RadiationModel::integrateSourceSpectrum ( - uint  - source_ID, + uint source_ID, - float  - wavelength1, + float wavelength1, - float  - wavelength2  - - - - ) - const + float wavelength2 ) const

@@ -1948,8 +1806,7 @@

float RadiationModel::integrateSpectrum ( - const std::vector< helios::vec2 > &  - object_spectrum) + const std::vector< helios::vec2 > & object_spectrum) const @@ -1977,19 +1834,12 @@

float RadiationModel::integrateSpectrum ( - const std::vector< helios::vec2 > &  - object_spectrum, + const std::vector< helios::vec2 > & object_spectrum, - const std::vector< helios::vec2 > &  - camera_spectrum  - - - - ) - const + const std::vector< helios::vec2 > & camera_spectrum ) const

@@ -2017,25 +1867,17 @@

float RadiationModel::integrateSpectrum ( - const std::vector< helios::vec2 > &  - object_spectrum, + const std::vector< helios::vec2 > & object_spectrum, - float  - wavelength1, + float wavelength1, - float  - wavelength2  - - - - ) - const + float wavelength2 ) const

@@ -2064,25 +1906,17 @@

float RadiationModel::integrateSpectrum ( - uint  - source_ID, + uint source_ID, - const std::vector< helios::vec2 > &  - object_spectrum, + const std::vector< helios::vec2 > & object_spectrum, - const std::vector< helios::vec2 > &  - camera_spectrum  - - - - ) - const + const std::vector< helios::vec2 > & camera_spectrum ) const

@@ -2111,31 +1945,22 @@

float RadiationModel::integrateSpectrum ( - uint  - source_ID, + uint source_ID, - const std::vector< helios::vec2 > &  - object_spectrum, + const std::vector< helios::vec2 > & object_spectrum, - float  - wavelength1, + float wavelength1, - float  - wavelength2  - - - - ) - const + float wavelength2 ) const

@@ -2165,8 +1990,7 @@

void RadiationModel::optionalOutputPrimitiveData ( - const char *  - label) + const char * label) @@ -2193,8 +2017,7 @@

void RadiationModel::runBand ( - const std::string &  - label) + const std::string & label) @@ -2207,7 +2030,7 @@

Note
Before running the band simulation, you must 1) add at least one radiative band to the simulation (see addRadiationBand()), 2) update the Context geometry in the model (see updateGeometry()), and 3) update radiative properties in the model (see updateRadiativeProperties).
+
Note
Before running the band simulation, you must 1) add at least one radiative band to the simulation (see addRadiationBand()), 2) update the Context geometry in the model (see updateGeometry()), and 3) update radiative properties in the model (see updateRadiativeProperties).

Definition at line 3117 of file RadiationModel.cpp.

@@ -2222,8 +2045,7 @@

void RadiationModel::runBand ( - const std::vector< std::string > &  - labels) + const std::vector< std::string > & labels) @@ -2236,7 +2058,7 @@

Note
Before running the band simulation, you must 1) add at least one radiative band to the simulation (see addRadiationBand()), 2) update the Context geometry in the model (see updateGeometry()), and 3) update radiative properties in the model (see updateRadiativeProperties).
+
Note
Before running the band simulation, you must 1) add at least one radiative band to the simulation (see addRadiationBand()), 2) update the Context geometry in the model (see updateGeometry()), and 3) update radiative properties in the model (see updateRadiativeProperties).

Definition at line 3122 of file RadiationModel.cpp.

@@ -2251,55 +2073,42 @@

void RadiationModel::runRadiationImaging ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::vector< std::string > &  - sourcelabels, + const std::vector< std::string > & sourcelabels, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const std::vector< std::string > &  - cameraresponselabels, + const std::vector< std::string > & cameraresponselabels, - helios::vec2  - wavelengthrange, + helios::vec2 wavelengthrange, - float  - fluxscale = 1, + float fluxscale = 1, - float  - diffusefactor = 0.0005, + float diffusefactor = 0.0005, - uint  - scatteringdepth = 4  - - - - ) - + uint scatteringdepth = 4 )

@@ -2332,55 +2141,42 @@

void RadiationModel::runRadiationImaging ( - const std::vector< std::string > &  - cameralabels, + const std::vector< std::string > & cameralabels, - const std::vector< std::string > &  - sourcelabels, + const std::vector< std::string > & sourcelabels, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const std::vector< std::string > &  - cameraresponselabels, + const std::vector< std::string > & cameraresponselabels, - helios::vec2  - wavelengthrange, + helios::vec2 wavelengthrange, - float  - fluxscale = 1, + float fluxscale = 1, - float  - diffusefactor = 0.0005, + float diffusefactor = 0.0005, - uint  - scatteringdepth = 4  - - - - ) - + uint scatteringdepth = 4 )

@@ -2413,25 +2209,17 @@

void RadiationModel::scaleSpectrum ( - const std::string &  - existing_global_data_label, + const std::string & existing_global_data_label, - const std::string &  - new_global_data_label, + const std::string & new_global_data_label, - float  - scale_factor  - - - - ) - const + float scale_factor ) const

@@ -2459,19 +2247,12 @@

void RadiationModel::scaleSpectrum ( - const std::string &  - global_data_label, + const std::string & global_data_label, - float  - scale_factor  - - - - ) - const + float scale_factor ) const

@@ -2498,31 +2279,22 @@

void RadiationModel::scaleSpectrumRandomly ( - const std::string &  - existing_global_data_label, + const std::string & existing_global_data_label, - const std::string &  - new_global_data_label, + const std::string & new_global_data_label, - float  - minimum_scale_factor, + float minimum_scale_factor, - float  - maximum_scale_factor  - - - - ) - const + float maximum_scale_factor ) const

@@ -2551,7 +2323,7 @@

int RadiationModel::selfTest ( - ) + ) @@ -2573,8 +2345,7 @@

void RadiationModel::setCameraCalibration ( - CameraCalibration *  - CameraCalibration) + CameraCalibration * CameraCalibration) @@ -2593,19 +2364,12 @@

void RadiationModel::setCameraLookat ( - const std::string &  - camera_label, + const std::string & camera_label, - const helios::vec3 &  - lookat  - - - - ) - + const helios::vec3 & lookat )

@@ -2632,19 +2396,12 @@

void RadiationModel::setCameraOrientation ( - const std::string &  - camera_label, + const std::string & camera_label, - const helios::SphericalCoord &  - direction  - - - - ) - + const helios::SphericalCoord & direction )

@@ -2671,19 +2428,12 @@

void RadiationModel::setCameraOrientation ( - const std::string &  - camera_label, + const std::string & camera_label, - const helios::vec3 &  - direction  - - - - ) - + const helios::vec3 & direction )

@@ -2710,19 +2460,12 @@

void RadiationModel::setCameraPosition ( - const std::string &  - camera_label, + const std::string & camera_label, - const helios::vec3 &  - position  - - - - ) - + const helios::vec3 & position )

@@ -2749,25 +2492,17 @@

void RadiationModel::setCameraSpectralResponse ( - const std::string &  - camera_label, + const std::string & camera_label, - const std::string &  - band_label, + const std::string & band_label, - const std::string &  - global_data  - - - - ) - + const std::string & global_data )

@@ -2796,25 +2531,17 @@

void RadiationModel::setDiffuseRadiationExtinctionCoeff ( - const std::string &  - label, + const std::string & label, - float  - K, + float K, - const helios::SphericalCoord &  - peak_dir  - - - - ) - + const helios::SphericalCoord & peak_dir )

@@ -2842,25 +2569,17 @@

void RadiationModel::setDiffuseRadiationExtinctionCoeff ( - const std::string &  - label, + const std::string & label, - float  - K, + float K, - const helios::vec3 &  - peak_dir  - - - - ) - + const helios::vec3 & peak_dir )

@@ -2888,19 +2607,12 @@

void RadiationModel::setDiffuseRadiationFlux ( - const std::string &  - label, + const std::string & label, - float  - flux  - - - - ) - + float flux )

@@ -2927,19 +2639,12 @@

void RadiationModel::setDiffuseRayCount ( - const std::string &  - label, + const std::string & label, - size_t  - N  - - - - ) - + size_t N )

@@ -2966,19 +2671,12 @@

void RadiationModel::setDiffuseSpectrum ( - const std::string &  - band_label, + const std::string & band_label, - const std::string &  - spectrum_label  - - - - ) - + const std::string & spectrum_label )

@@ -3005,8 +2703,7 @@

void RadiationModel::setDiffuseSpectrum ( - const std::string &  - spectrum_label) + const std::string & spectrum_label) @@ -3033,19 +2730,12 @@

void RadiationModel::setDiffuseSpectrumIntegral ( - const std::string &  - band_label, + const std::string & band_label, - float  - spectrum_integral  - - - - ) - + float spectrum_integral )

@@ -3073,31 +2763,22 @@

void RadiationModel::setDiffuseSpectrumIntegral ( - const std::string &  - band_label, + const std::string & band_label, - float  - spectrum_integral, + float spectrum_integral, - float  - wavelength1, + float wavelength1, - float  - wavelength2  - - - - ) - + float wavelength2 )

@@ -3125,8 +2806,7 @@

void RadiationModel::setDiffuseSpectrumIntegral ( - float  - spectrum_integral) + float spectrum_integral) @@ -3154,25 +2834,17 @@

void RadiationModel::setDiffuseSpectrumIntegral ( - float  - spectrum_integral, + float spectrum_integral, - float  - wavelength1, + float wavelength1, - float  - wavelength2  - - - - ) - + float wavelength2 )

@@ -3199,19 +2871,12 @@

void RadiationModel::setDirectRayCount ( - const std::string &  - label, + const std::string & label, - size_t  - N  - - - - ) - + size_t N )

@@ -3238,19 +2903,12 @@

void RadiationModel::setMinScatterEnergy ( - const std::string &  - label, + const std::string & label, - uint  - energy  - - - - ) - + uint energy )

@@ -3277,25 +2935,17 @@

void RadiationModel::setPadValue ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const std::vector< float > &  - padvalues  - - - - ) - + const std::vector< float > & padvalues )

@@ -3323,19 +2973,12 @@

void RadiationModel::setScatteringDepth ( - const std::string &  - label, + const std::string & label, - uint  - depth  - - - - ) - + uint depth )

@@ -3362,25 +3005,17 @@

void RadiationModel::setSourceFlux ( - const std::vector< uint > &  - source_ID, + const std::vector< uint > & source_ID, - const std::string &  - band_label, + const std::string & band_label, - float  - flux  - - - - ) - + float flux )

@@ -3408,25 +3043,17 @@

void RadiationModel::setSourceFlux ( - uint  - source_ID, + uint source_ID, - const std::string &  - band_label, + const std::string & band_label, - float  - flux  - - - - ) - + float flux )

@@ -3454,19 +3081,12 @@

void RadiationModel::setSourcePosition ( - uint  - source_ID, + uint source_ID, - const helios::SphericalCoord &  - position  - - - - ) - + const helios::SphericalCoord & position )

@@ -3493,19 +3113,12 @@

void RadiationModel::setSourcePosition ( - uint  - source_ID, + uint source_ID, - const helios::vec3 &  - position  - - - - ) - + const helios::vec3 & position )

@@ -3532,19 +3145,12 @@

void RadiationModel::setSourceSpectrum ( - const std::vector< uint > &  - source_ID, + const std::vector< uint > & source_ID, - const std::string &  - spectrum_label  - - - - ) - + const std::string & spectrum_label )

@@ -3571,19 +3177,12 @@

void RadiationModel::setSourceSpectrum ( - const std::vector< uint > &  - source_ID, + const std::vector< uint > & source_ID, - const std::vector< helios::vec2 > &  - spectrum  - - - - ) - + const std::vector< helios::vec2 > & spectrum )

@@ -3610,19 +3209,12 @@

void RadiationModel::setSourceSpectrum ( - uint  - source_ID, + uint source_ID, - const std::string &  - spectrum_label  - - - - ) - + const std::string & spectrum_label )

@@ -3649,19 +3241,12 @@

void RadiationModel::setSourceSpectrum ( - uint  - source_ID, + uint source_ID, - const std::vector< helios::vec2 > &  - spectrum  - - - - ) - + const std::vector< helios::vec2 > & spectrum )

@@ -3688,19 +3273,12 @@

void RadiationModel::setSourceSpectrumIntegral ( - uint  - source_ID, + uint source_ID, - float  - source_integral  - - - - ) - + float source_integral )

@@ -3713,7 +3291,7 @@

Note
This function will call setSourceFlux() for all bands to update source fluxes based on the new spectrum integral
+
Note
This function will call setSourceFlux() for all bands to update source fluxes based on the new spectrum integral

Definition at line 482 of file RadiationModel.cpp.

@@ -3728,31 +3306,22 @@

void RadiationModel::setSourceSpectrumIntegral ( - uint  - source_ID, + uint source_ID, - float  - source_integral, + float source_integral, - float  - wavelength1, + float wavelength1, - float  - wavelength2  - - - - ) - + float wavelength2 )

@@ -3765,7 +3334,7 @@

Note
This function will call setSourceFlux() for all bands to update source fluxes based on the new spectrum integral
+
Note
This function will call setSourceFlux() for all bands to update source fluxes based on the new spectrum integral

Definition at line 498 of file RadiationModel.cpp.

@@ -3780,43 +3349,32 @@

void RadiationModel::updateCameraResponse ( - const std::string &  - orginalcameralabel, + const std::string & orginalcameralabel, - const std::vector< std::string > &  - sourcelabels_raw, + const std::vector< std::string > & sourcelabels_raw, - const std::vector< std::string > &  - cameraresponselabels, + const std::vector< std::string > & cameraresponselabels, - helios::vec2 &  - wavelengthrange, + helios::vec2 & wavelengthrange, - const std::vector< std::vector< float > > &  - truevalues, + const std::vector< std::vector< float > > & truevalues, - const std::string &  - calibratedmark  - - - - ) - + const std::string & calibratedmark )

@@ -3847,14 +3405,14 @@

void RadiationModel::updateGeometry ( - ) + )

Adds all geometric primitives from the Context to OptiX.

-

This function should be called anytime Context geometry is created or modified

Note
updateGeometry() must be called before simulation can be run
+

This function should be called anytime Context geometry is created or modified

Note
updateGeometry() must be called before simulation can be run

Definition at line 1985 of file RadiationModel.cpp.

@@ -3869,8 +3427,7 @@

void RadiationModel::updateGeometry ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -3883,7 +3440,7 @@

Note
updateGeometry() must be called before simulation can be run
+
Note
updateGeometry() must be called before simulation can be run

Definition at line 1989 of file RadiationModel.cpp.

@@ -3898,43 +3455,32 @@

void RadiationModel::writeCameraImage ( - const std::string &  - camera, + const std::string & camera, - const std::vector< std::string > &  - bands, + const std::vector< std::string > & bands, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1, + int frame = -1, - float  - flux_to_pixel_conversion = 1.f  - - - - ) - + float flux_to_pixel_conversion = 1.f )

@@ -3965,37 +3511,27 @@

void RadiationModel::writeCameraImageData ( - const std::string &  - camera, + const std::string & camera, - const std::string &  - band, + const std::string & band, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1  - - - - ) - + int frame = -1 )

@@ -4025,31 +3561,22 @@

void RadiationModel::writeDepthImageData ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1  - - - - ) - + int frame = -1 )

@@ -4078,49 +3605,37 @@

void RadiationModel::writeImageBoundingBoxes ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - uint  - object_class_ID, + uint object_class_ID, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - bool  - append_label_file = false, + bool append_label_file = false, - int  - frame = -1  - - - - ) - + int frame = -1 )

@@ -4151,49 +3666,37 @@

void RadiationModel::writeImageBoundingBoxes_ObjectData ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::string &  - object_data_label, + const std::string & object_data_label, - uint  - object_class_ID, + uint object_class_ID, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - bool  - append_label_file = false, + bool append_label_file = false, - int  - frame = -1  - - - - ) - + int frame = -1 )

@@ -4224,37 +3727,27 @@

void RadiationModel::writeNormCameraImage ( - const std::string &  - camera, + const std::string & camera, - const std::vector< std::string > &  - bands, + const std::vector< std::string > & bands, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1  - - - - ) - + int frame = -1 )

@@ -4284,37 +3777,27 @@

void RadiationModel::writeNormDepthImage ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - float  - max_depth, + float max_depth, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1  - - - - ) - + int frame = -1 )

@@ -4344,43 +3827,32 @@

void RadiationModel::writeObjectDataLabelMap ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::string &  - object_data_label, + const std::string & object_data_label, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1, + int frame = -1, - float  - padvalue = NAN  - - - - ) - + float padvalue = NAN )

@@ -4411,43 +3883,32 @@

void RadiationModel::writePrimitiveDataLabelMap ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - const std::string &  - imagefile_base, + const std::string & imagefile_base, - const std::string &  - image_path = "./", + const std::string & image_path = "./", - int  - frame = -1, + int frame = -1, - float  - padvalue = NAN  - - - - ) - + float padvalue = NAN )

@@ -4477,7 +3938,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_solar_position.html b/doc/html/class_solar_position.html index 7308e8d71..15a1f19c4 100644 --- a/doc/html/class_solar_position.html +++ b/doc/html/class_solar_position.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,61 +105,61 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 SolarPosition (helios::Context *context_ptr)
 SolarPosition (helios::Context *context_ptr)
 Solar position model default constructor. Initializes location based on the location set in the Context.
 
 SolarPosition (float UTC_hrs, float latitude_deg, float longitude_deg, helios::Context *context_ptr)
 SolarPosition (float UTC_hrs, float latitude_deg, float longitude_deg, helios::Context *context_ptr)
 Solar position model constructor.
 
int selfTest () const
int selfTest () const
 Function to perform a self-test of model functions.
 
helios::Time getSunriseTime () const
helios::Time getSunriseTime () const
 Get the approximate time of sunrise at the current location.
 
helios::Time getSunsetTime () const
helios::Time getSunsetTime () const
 Get the approximate time of sunset at the current location.
 
float getSunElevation () const
float getSunElevation () const
 Get the current sun elevation angle in radians for the current location. The sun angle is computed based on the current time and date set in the Helios context.
 
float getSunZenith () const
float getSunZenith () const
 Get the current sun zenithal angle in radians for the current location. The sun angle is computed based on the current time and date set in the Helios context.
 
float getSunAzimuth () const
float getSunAzimuth () const
 Get the current sun azimuthal angle in radians for the current location. The sun angle is computed based on the current time and date set in the Helios context.
 
helios::vec3 getSunDirectionVector () const
helios::vec3 getSunDirectionVector () const
 Get a unit vector pointing toward the sun for the current location. The sun angle is computed based on the current time and date set in the Helios context.
 
helios::SphericalCoord getSunDirectionSpherical () const
helios::SphericalCoord getSunDirectionSpherical () const
 Get a spherical coordinate vector pointing toward the sun for the current location. The sun angle is computed based on the current time and date set in the Helios context.
 
void setSunDirection (const helios::SphericalCoord &sundirection)
void setSunDirection (const helios::SphericalCoord &sundirection)
 Override solar position calculation based on time in the Context by using a prescribed solar position.
 
float getSolarFlux (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
float getSolarFlux (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
 Get the solar radiation flux perpendicular to the sun direction.
 
float getSolarFluxPAR (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
float getSolarFluxPAR (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
 Get the photosynthetically active (PAR) component of solar radiation flux perpendicular to the sun direction.
 
float getSolarFluxNIR (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
float getSolarFluxNIR (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
 Get the near-infrared (NIR) component of solar radiation flux perpendicular to the sun direction.
 
float getDiffuseFraction (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
float getDiffuseFraction (float pressure_Pa, float temperature_K, float humidity_rel, float turbidity) const
 Get the fraction of solar radiation flux that is diffuse.
 
float getAmbientLongwaveFlux (float temperature_K, float humidity_rel) const
float getAmbientLongwaveFlux (float temperature_K, float humidity_rel) const
 Calculate the ambient (sky) longwave radiation flux.
 
float calibrateTurbidityFromTimeseries (const std::string &timeseries_shortwave_flux_label_Wm2) const
float calibrateTurbidityFromTimeseries (const std::string &timeseries_shortwave_flux_label_Wm2) const
 Calculate the turbidity value based on a timeseries of net radiation measurements.
 
void enableCloudCalibration (const std::string &timeseries_shortwave_flux_label_Wm2)
void enableCloudCalibration (const std::string &timeseries_shortwave_flux_label_Wm2)
 Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against measured solar flux data.
 
void disableCloudCalibration ()
void disableCloudCalibration ()
 Disable calibration of solar flux and diffuse fraction for clouds.
 
@@ -167,8 +179,7 @@

SolarPosition::SolarPosition ( - helios::Context *  - context_ptr) + helios::Context * context_ptr) @@ -200,31 +211,22 @@

SolarPosition::SolarPosition ( - float  - UTC_hrs, + float UTC_hrs, - float  - latitude_deg, + float latitude_deg, - float  - longitude_deg, + float longitude_deg, - helios::Context *  - context_ptr  - - - - ) - + helios::Context * context_ptr )

@@ -254,8 +256,7 @@

float SolarPosition::calibrateTurbidityFromTimeseries ( - const std::string &  - timeseries_shortwave_flux_label_Wm2) + const std::string & timeseries_shortwave_flux_label_Wm2) const @@ -284,7 +285,7 @@

void SolarPosition::disableCloudCalibration ( - ) + ) @@ -305,8 +306,7 @@

void SolarPosition::enableCloudCalibration ( - const std::string &  - timeseries_shortwave_flux_label_Wm2) + const std::string & timeseries_shortwave_flux_label_Wm2) @@ -333,19 +333,12 @@

float SolarPosition::getAmbientLongwaveFlux ( - float  - temperature_K, + float temperature_K, - float  - humidity_rel  - - - - ) - const + float humidity_rel ) const

@@ -374,31 +367,22 @@

float SolarPosition::getDiffuseFraction ( - float  - pressure_Pa, + float pressure_Pa, - float  - temperature_K, + float temperature_K, - float  - humidity_rel, + float humidity_rel, - float  - turbidity  - - - - ) - const + float turbidity ) const

@@ -428,31 +412,22 @@

float SolarPosition::getSolarFlux ( - float  - pressure_Pa, + float pressure_Pa, - float  - temperature_K, + float temperature_K, - float  - humidity_rel, + float humidity_rel, - float  - turbidity  - - - - ) - const + float turbidity ) const

@@ -467,7 +442,7 @@

Note
The flux given by this function is the flux normal to the sun direction. To get the flux on a horizontal surface, multiply the returned value by cos(theta), where theta can be found by calling the getSunZenith() function.
+
Note
The flux given by this function is the flux normal to the sun direction. To get the flux on a horizontal surface, multiply the returned value by cos(theta), where theta can be found by calling the getSunZenith() function.
The solar flux model is based on Gueymard (2008).
Returns
Global solar radiation flux NORMAL TO THE SUN DIRECTION in W/m^2
@@ -485,31 +460,22 @@

float SolarPosition::getSolarFluxNIR ( - float  - pressure_Pa, + float pressure_Pa, - float  - temperature_K, + float temperature_K, - float  - humidity_rel, + float humidity_rel, - float  - turbidity  - - - - ) - const + float turbidity ) const

@@ -524,7 +490,7 @@

Note
The flux given by this function is the flux normal to the sun direction. To get the flux on a horizontal surface, multiply the returned value by cos(theta), where theta can be found by calling the getSunZenith() function.
+
Note
The flux given by this function is the flux normal to the sun direction. To get the flux on a horizontal surface, multiply the returned value by cos(theta), where theta can be found by calling the getSunZenith() function.
The solar flux model is based on Gueymard (2008).
Returns
Global solar radiation flux NORMAL TO THE SUN DIRECTION in W/m^2
@@ -542,31 +508,22 @@

float SolarPosition::getSolarFluxPAR ( - float  - pressure_Pa, + float pressure_Pa, - float  - temperature_K, + float temperature_K, - float  - humidity_rel, + float humidity_rel, - float  - turbidity  - - - - ) - const + float turbidity ) const

@@ -581,7 +538,7 @@

Note
The flux given by this function is the flux normal to the sun direction. To get the flux on a horizontal surface, multiply the returned value by cos(theta), where theta can be found by calling the getSunZenith() function.
+
Note
The flux given by this function is the flux normal to the sun direction. To get the flux on a horizontal surface, multiply the returned value by cos(theta), where theta can be found by calling the getSunZenith() function.
The solar flux model is based on Gueymard (2008).
Returns
Global solar radiation flux NORMAL TO THE SUN DIRECTION in W/m^2
@@ -599,7 +556,7 @@

float SolarPosition::getSunAzimuth ( - ) + ) const @@ -620,7 +577,7 @@

SphericalCoord SolarPosition::getSunDirectionSpherical ( - ) + ) const @@ -641,7 +598,7 @@

vec3 SolarPosition::getSunDirectionVector ( - ) + ) const @@ -662,7 +619,7 @@

float SolarPosition::getSunElevation ( - ) + ) const @@ -683,7 +640,7 @@

Time SolarPosition::getSunriseTime ( - ) + ) const @@ -704,7 +661,7 @@

Time SolarPosition::getSunsetTime ( - ) + ) const @@ -725,7 +682,7 @@

float SolarPosition::getSunZenith ( - ) + ) const @@ -746,7 +703,7 @@

int SolarPosition::selfTest ( - ) + ) const @@ -767,8 +724,7 @@

void SolarPosition::setSunDirection ( - const helios::SphericalCoord &  - sundirection) + const helios::SphericalCoord & sundirection) @@ -794,7 +750,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_stomatal_conductance_model.html b/doc/html/class_stomatal_conductance_model.html index 22a24d5d1..3696d1a17 100644 --- a/doc/html/class_stomatal_conductance_model.html +++ b/doc/html/class_stomatal_conductance_model.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,85 +105,85 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 StomatalConductanceModel (helios::Context *m_context)
 StomatalConductanceModel (helios::Context *m_context)
 Default constructor.
 
int selfTest ()
int selfTest ()
 Self-test (unit test) routine.
 
void setModelCoefficients (const BWBcoefficients &coeffs)
void setModelCoefficients (const BWBcoefficients &coeffs)
 Set the model coefficient values for all primitives - Ball, Woodrow, Berry model.
 
void setModelCoefficients (const BWBcoefficients &coeffs, const std::vector< uint > &UUIDs)
void setModelCoefficients (const BWBcoefficients &coeffs, const std::vector< uint > &UUIDs)
 Set the model coefficient values for a subset of primitives based on their UUIDs - Ball, Woodrow, Berry model.
 
void setModelCoefficients (const BBLcoefficients &coeffs)
void setModelCoefficients (const BBLcoefficients &coeffs)
 Set the model coefficient values for all primitives - Ball-Berry-Leuning model.
 
void setModelCoefficients (const BBLcoefficients &coeffs, const std::vector< uint > &UUIDs)
void setModelCoefficients (const BBLcoefficients &coeffs, const std::vector< uint > &UUIDs)
 Set the model coefficient values for a subset of primitives based on their UUIDs - Ball-Berry-Leuning model.
 
void setModelCoefficients (const MOPTcoefficients &coeffs)
void setModelCoefficients (const MOPTcoefficients &coeffs)
 Set the model coefficient values for all primitives - Medlyn et al. optimality model.
 
void setModelCoefficients (const MOPTcoefficients &coeffs, const std::vector< uint > &UUIDs)
void setModelCoefficients (const MOPTcoefficients &coeffs, const std::vector< uint > &UUIDs)
 Set the model coefficient values for a subset of primitives based on their UUIDs - Medlyn et al. optimality model.
 
void setModelCoefficients (const BMFcoefficients &coeffs)
void setModelCoefficients (const BMFcoefficients &coeffs)
 Set the model coefficient values for all primitives - Buckley, Mott, Farquhar model.
 
void setModelCoefficients (const BMFcoefficients &coeffs, const std::vector< uint > &UUIDs)
void setModelCoefficients (const BMFcoefficients &coeffs, const std::vector< uint > &UUIDs)
 Set the model coefficient values for a subset of primitives based on their UUIDs - Buckley, Mott, Farquhar model.
 
void setModelCoefficients (const BBcoefficients &coeffs)
void setModelCoefficients (const BBcoefficients &coeffs)
 Set the model coefficient values for all primitives.
 
void setModelCoefficients (const BBcoefficients &coeffs, const std::vector< uint > &UUIDs)
void setModelCoefficients (const BBcoefficients &coeffs, const std::vector< uint > &UUIDs)
 Set the model coefficient values for a subset of primitives based on their UUIDs.
 
void setModelCoefficients (const std::vector< BMFcoefficients > &coeffs, const std::vector< uint > &UUIDs)
void setModelCoefficients (const std::vector< BMFcoefficients > &coeffs, const std::vector< uint > &UUIDs)
 Set the model coefficient values for a subset of primitives based on their UUIDs.
 
void setBMFCoefficientsFromLibrary (const std::string &species)
void setBMFCoefficientsFromLibrary (const std::string &species)
 Set the model coefficient values using one of the available species in the library.
 
void setBMFCoefficientsFromLibrary (const std::string &species, const std::vector< uint > &UUIDs)
void setBMFCoefficientsFromLibrary (const std::string &species, const std::vector< uint > &UUIDs)
 Set the model coefficient values using one of the available species in the library for a subset of primitives based on their UUIDs.
 
BMFcoefficients getBMFCoefficientsFromLibrary (const std::string &species)
BMFcoefficients getBMFCoefficientsFromLibrary (const std::string &species)
 Get the model coefficient values using one of the available species in the library.
 
void setDynamicTimeConstants (float tau_open, float tau_close)
void setDynamicTimeConstants (float tau_open, float tau_close)
 Set time constants for dynamic stomatal opening and closing for all primitives.
 
void setDynamicTimeConstants (float tau_open, float tau_close, const std::vector< uint > &UUIDs)
void setDynamicTimeConstants (float tau_open, float tau_close, const std::vector< uint > &UUIDs)
 Set time constants for dynamic stomatal opening and closing for a subset of primitives based on their UUIDs.
 
void run ()
void run ()
 Update the stomatal conductance for all primitives in the context.
 
void run (const std::vector< uint > &UUIDs)
void run (const std::vector< uint > &UUIDs)
 Update the stomatal conductance for a subset of primitives in the context.
 
void run (float dt)
void run (float dt)
 Update the stomatal conductance for all primitives in the context based on the dynamic stomatal model version.
 
void run (const std::vector< uint > &UUIDs, float dt)
void run (const std::vector< uint > &UUIDs, float dt)
 Update the stomatal conductance for a subset of primitives in the context.
 
void disableMessages ()
void disableMessages ()
 Disable output messages to the standard output.
 
void enableMessages ()
void enableMessages ()
 Ensable output messages to the standard output.
 
void optionalOutputPrimitiveData (const char *label)
void optionalOutputPrimitiveData (const char *label)
 Add optional output primitive data values to the Context.
 
void printDefaultValueReport () const
void printDefaultValueReport () const
 Print a report detailing usage of default input values for all primitives in the Context.
 
void printDefaultValueReport (const std::vector< uint > &UUIDs) const
void printDefaultValueReport (const std::vector< uint > &UUIDs) const
 Print a report detailing usage of default input values based on a subset of primitive UUIDs.
 
@@ -191,8 +203,7 @@

StomatalConductanceModel::StomatalConductanceModel ( - helios::Context *  - m_context) + helios::Context * m_context) @@ -225,7 +236,7 @@

void StomatalConductanceModel::disableMessages ( - ) + ) @@ -246,7 +257,7 @@

void StomatalConductanceModel::enableMessages ( - ) + ) @@ -267,8 +278,7 @@

BMFcoefficients StomatalConductanceModel::getBMFCoefficientsFromLibrary ( - const std::string &  - species) + const std::string & species) @@ -295,8 +305,7 @@

void StomatalConductanceModel::optionalOutputPrimitiveData ( - const char *  - label) + const char * label) @@ -323,7 +332,7 @@

void StomatalConductanceModel::printDefaultValueReport ( - ) + ) const @@ -344,8 +353,7 @@

void StomatalConductanceModel::printDefaultValueReport ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) const @@ -372,7 +380,7 @@

void StomatalConductanceModel::run ( - ) + ) @@ -393,8 +401,7 @@

void StomatalConductanceModel::run ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -421,19 +428,12 @@

void StomatalConductanceModel::run ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - float  - dt  - - - - ) - + float dt )

@@ -460,8 +460,7 @@

void StomatalConductanceModel::run ( - float  - dt) + float dt) @@ -488,7 +487,7 @@

int StomatalConductanceModel::selfTest ( - ) + ) @@ -509,8 +508,7 @@

void StomatalConductanceModel::setBMFCoefficientsFromLibrary ( - const std::string &  - species) + const std::string & species) @@ -537,19 +535,12 @@

void StomatalConductanceModel::setBMFCoefficientsFromLibrary ( - const std::string &  - species, + const std::string & species, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -576,19 +567,12 @@

void StomatalConductanceModel::setDynamicTimeConstants ( - float  - tau_open, + float tau_open, - float  - tau_close  - - - - ) - + float tau_close )

@@ -615,25 +599,17 @@

void StomatalConductanceModel::setDynamicTimeConstants ( - float  - tau_open, + float tau_open, - float  - tau_close, + float tau_close, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -661,8 +637,7 @@

void StomatalConductanceModel::setModelCoefficients ( - const BBcoefficients &  - coeffs) + const BBcoefficients & coeffs) @@ -689,19 +664,12 @@

void StomatalConductanceModel::setModelCoefficients ( - const BBcoefficients &  - coeffs, + const BBcoefficients & coeffs, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -728,8 +696,7 @@

void StomatalConductanceModel::setModelCoefficients ( - const BBLcoefficients &  - coeffs) + const BBLcoefficients & coeffs) @@ -756,19 +723,12 @@

void StomatalConductanceModel::setModelCoefficients ( - const BBLcoefficients &  - coeffs, + const BBLcoefficients & coeffs, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -795,8 +755,7 @@

void StomatalConductanceModel::setModelCoefficients ( - const BMFcoefficients &  - coeffs) + const BMFcoefficients & coeffs) @@ -823,19 +782,12 @@

void StomatalConductanceModel::setModelCoefficients ( - const BMFcoefficients &  - coeffs, + const BMFcoefficients & coeffs, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -862,8 +814,7 @@

void StomatalConductanceModel::setModelCoefficients ( - const BWBcoefficients &  - coeffs) + const BWBcoefficients & coeffs) @@ -890,19 +841,12 @@

void StomatalConductanceModel::setModelCoefficients ( - const BWBcoefficients &  - coeffs, + const BWBcoefficients & coeffs, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -929,8 +873,7 @@

void StomatalConductanceModel::setModelCoefficients ( - const MOPTcoefficients &  - coeffs) + const MOPTcoefficients & coeffs) @@ -957,19 +900,12 @@

void StomatalConductanceModel::setModelCoefficients ( - const MOPTcoefficients &  - coeffs, + const MOPTcoefficients & coeffs, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -996,19 +932,12 @@

void StomatalConductanceModel::setModelCoefficients ( - const std::vector< BMFcoefficients > &  - coeffs, + const std::vector< BMFcoefficients > & coeffs, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )

@@ -1031,7 +960,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_synthetic_annotation.html b/doc/html/class_synthetic_annotation.html index c8cea2b85..73ff8fa5b 100644 --- a/doc/html/class_synthetic_annotation.html +++ b/doc/html/class_synthetic_annotation.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,52 +105,52 @@ - + - + - + - + - + - + - + - + - + - + - + - - - + + - - + + - + - + - + - + - +

Public Member Functions

 SyntheticAnnotation (helios::Context *context)
 SyntheticAnnotation (helios::Context *context)
 Synthetic image annotation plug-in default constructor.
 
int selfTest () const
int selfTest () const
 Function to perform a self-test of plug-in functions.
 
void labelPrimitives (const char *label)
void labelPrimitives (const char *label)
 
void labelPrimitives (uint UUIDs, const char *label)
void labelPrimitives (uint UUIDs, const char *label)
 
void labelPrimitives (std::vector< uint > UUIDs, const char *label)
void labelPrimitives (std::vector< uint > UUIDs, const char *label)
 
void labelPrimitives (std::vector< std::vector< uint > > UUIDs, const char *label)
void labelPrimitives (std::vector< std::vector< uint > > UUIDs, const char *label)
 
void labelUnlabeledPrimitives (const char *label)
void labelUnlabeledPrimitives (const char *label)
 
void setBackgroundColor (const helios::RGBcolor &color)
void setBackgroundColor (const helios::RGBcolor &color)
 
void addSkyDome (const char *filename)
void addSkyDome (const char *filename)
 
void setWindowSize (uint window_width, uint window_height)
void setWindowSize (uint window_width, uint window_height)
 
void setCameraPosition (const helios::vec3 &camera_position, const helios::vec3 &camera_lookat)
void setCameraPosition (const helios::vec3 &camera_position, const helios::vec3 &camera_lookat)
 
+
void setCameraPosition (const std::vector< helios::vec3 > &camera_position, const std::vector< helios::vec3 > &camera_lookat)
 
void enableObjectDetection ()
 Enable calculation and writing of rectangular bounding boxes for object detection when render() function is called.
void enableObjectDetection ()
 Enable calculation and writing of rectangular bounding boxes for object detection when render() function is called.
 
void disableObjectDetection ()
 Disable calculation and writing of rectangular bounding boxes for object detection when render() function is called.
void disableObjectDetection ()
 Disable calculation and writing of rectangular bounding boxes for object detection when render() function is called.
 
void enableSemanticSegmentation ()
void enableSemanticSegmentation ()
 Enable calculation and writing of object mask (full image) for semantic segmentation.
 
void disableSemanticSegmentation ()
void disableSemanticSegmentation ()
 Disable calculation and writing of object mask (full image) for semantic segmentation.
 
void enableInstanceSegmentation ()
void enableInstanceSegmentation ()
 Enable calculation and writing of un-occluded object masks for each object (instance segmentation)
 
void disableInstanceSegmentation ()
void disableInstanceSegmentation ()
 Disable calculation and writing of un-occluded object masks for each object (instance segmentation)
 
void render (const char *outputdir)
void render (const char *outputdir)
 Render RGB image and generate annotations.
 
@@ -158,8 +170,7 @@

SyntheticAnnotation::SyntheticAnnotation ( - helios::Context *  - context) + helios::Context * context) @@ -192,8 +203,7 @@

void SyntheticAnnotation::addSkyDome ( - const char *  - filename) + const char * filename) @@ -212,7 +222,7 @@

void SyntheticAnnotation::disableInstanceSegmentation ( - ) + ) @@ -233,13 +243,13 @@

void SyntheticAnnotation::disableObjectDetection ( - ) + )

-

Disable calculation and writing of rectangular bounding boxes for object detection when render() function is called.

+

Disable calculation and writing of rectangular bounding boxes for object detection when render() function is called.

Definition at line 150 of file SyntheticAnnotation.cpp.

@@ -254,7 +264,7 @@

void SyntheticAnnotation::disableSemanticSegmentation ( - ) + ) @@ -275,7 +285,7 @@

void SyntheticAnnotation::enableInstanceSegmentation ( - ) + ) @@ -296,13 +306,13 @@

void SyntheticAnnotation::enableObjectDetection ( - ) + )

-

Enable calculation and writing of rectangular bounding boxes for object detection when render() function is called.

+

Enable calculation and writing of rectangular bounding boxes for object detection when render() function is called.

Definition at line 146 of file SyntheticAnnotation.cpp.

@@ -317,7 +327,7 @@

void SyntheticAnnotation::enableSemanticSegmentation ( - ) + ) @@ -338,8 +348,7 @@

void SyntheticAnnotation::labelPrimitives ( - const char *  - label) + const char * label) @@ -358,19 +367,12 @@

void SyntheticAnnotation::labelPrimitives ( - std::vector< std::vector< uint > >  - UUIDs, + std::vector< std::vector< uint > > UUIDs, - const char *  - label  - - - - ) - + const char * label )

@@ -388,19 +390,12 @@

void SyntheticAnnotation::labelPrimitives ( - std::vector< uint >  - UUIDs, + std::vector< uint > UUIDs, - const char *  - label  - - - - ) - + const char * label )

@@ -418,19 +413,12 @@

void SyntheticAnnotation::labelPrimitives ( - uint  - UUIDs, + uint UUIDs, - const char *  - label  - - - - ) - + const char * label )

@@ -448,8 +436,7 @@

void SyntheticAnnotation::labelUnlabeledPrimitives ( - const char *  - label) + const char * label) @@ -468,8 +455,7 @@

void SyntheticAnnotation::render ( - const char *  - outputdir) + const char * outputdir) @@ -490,7 +476,7 @@

int SyntheticAnnotation::selfTest ( - ) + ) const @@ -511,8 +497,7 @@

void SyntheticAnnotation::setBackgroundColor ( - const helios::RGBcolor &  - color) + const helios::RGBcolor & color) @@ -531,19 +516,12 @@

void SyntheticAnnotation::setCameraPosition ( - const helios::vec3 &  - camera_position, + const helios::vec3 & camera_position, - const helios::vec3 &  - camera_lookat  - - - - ) - + const helios::vec3 & camera_lookat )

@@ -561,19 +539,12 @@

void SyntheticAnnotation::setWindowSize ( - uint  - window_width, + uint window_width, - uint  - window_height  - - - - ) - + uint window_height )

@@ -589,7 +560,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_visualizer.html b/doc/html/class_visualizer.html index 32f4a3140..1145f96dd 100644 --- a/doc/html/class_visualizer.html +++ b/doc/html/class_visualizer.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Types | @@ -93,301 +105,301 @@

Class for visualization of simulation results. - More...

+ More...

#include <Visualizer.h>

- - + - - + - - +

Public Types

enum  CoordinateSystem { COORDINATES_WINDOW_NORMALIZED = 0 -, COORDINATES_CARTESIAN = 1 +
enum  CoordinateSystem { COORDINATES_WINDOW_NORMALIZED = 0 +, COORDINATES_CARTESIAN = 1 }
 Coordinate system to be used when specifying spatial coordinates. More...
 Coordinate system to be used when specifying spatial coordinates. More...
 
enum  Ctable {
-  COLORMAP_HOT = 0 -, COLORMAP_COOL = 1 -, COLORMAP_RAINBOW = 2 -, COLORMAP_LAVA = 3 +
enum  Ctable {
+  COLORMAP_HOT = 0 +, COLORMAP_COOL = 1 +, COLORMAP_RAINBOW = 2 +, COLORMAP_LAVA = 3 ,
-  COLORMAP_PARULA = 4 -, COLORMAP_GRAY = 5 -, COLORMAP_CUSTOM = 6 +  COLORMAP_PARULA = 4 +, COLORMAP_GRAY = 5 +, COLORMAP_CUSTOM = 6
}
 Pseudocolor map tables. More...
 Pseudocolor map tables. More...
 
enum  LightingModel { LIGHTING_NONE =0 -, LIGHTING_PHONG =1 -, LIGHTING_PHONG_SHADOWED =2 +
enum  LightingModel { LIGHTING_NONE =0 +, LIGHTING_PHONG =1 +, LIGHTING_PHONG_SHADOWED =2 }
 Lighting model to use for shading primitives. More...
 Lighting model to use for shading primitives. More...
 
- + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Visualizer (uint Wdisplay)
 Visualizer (uint Wdisplay)
 Visualizer constructor.
 
 Visualizer (uint Wdisplay, uint Hdisplay)
 Visualizer (uint Wdisplay, uint Hdisplay)
 Visualizer constructor.
 
 Visualizer (uint Wdisplay, uint Hdisplay, int aliasing_samples)
 Visualizer (uint Wdisplay, uint Hdisplay, int aliasing_samples)
 
 Visualizer (uint Wdisplay, uint Hdisplay, int aliasing_samples, bool window_decorations)
 Visualizer (uint Wdisplay, uint Hdisplay, int aliasing_samples, bool window_decorations)
 Visualizer constructor with option to remove window decorations (e.g., header bar, trim). This is a workaround for an error that occurs on Linux systems when printing the window to a JPEG image (printWindow). Once a fix is found, this function will likely be removed.
 
int selfTest ()
int selfTest ()
 Visualizer self-test routine.
 
void enableMessages ()
void enableMessages ()
 Enable standard output from this plug-in (default)
 
void disableMessages ()
void disableMessages ()
 Disable standard output from this plug-in.
 
void setCameraPosition (const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
void setCameraPosition (const helios::vec3 &cameraPosition, const helios::vec3 &lookAt)
 Set camera position.
 
void setCameraPosition (const helios::SphericalCoord &cameraAngle, const helios::vec3 &lookAt)
void setCameraPosition (const helios::SphericalCoord &cameraAngle, const helios::vec3 &lookAt)
 Set camera position.
 
void setCameraFieldOfView (float angle_FOV)
void setCameraFieldOfView (float angle_FOV)
 Set the camera field of view (angle width) in degrees. Default value is 45 degrees.
 
void setLightDirection (const helios::vec3 &direction)
void setLightDirection (const helios::vec3 &direction)
 Set the direction of the light source.
 
void getDomainBoundingBox (helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
void getDomainBoundingBox (helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
 Get a box that bounds all primitives in the domain.
 
float getDomainBoundingRadius () const
float getDomainBoundingRadius () const
 Get the radius of a sphere that bounds all primitives in the domain.
 
void setLightingModel (LightingModel lightingmodel)
void setLightingModel (LightingModel lightingmodel)
 Set the lighting model for shading of all primitives.
 
void setLightIntensityFactor (float lightintensityfactor)
void setLightIntensityFactor (float lightintensityfactor)
 Set the light intensity scaling factor.
 
void setBackgroundColor (const helios::RGBcolor &color)
void setBackgroundColor (const helios::RGBcolor &color)
 Set the background color for the visualizer window.
 
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its center.
 
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its center.
 
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file, CoordinateSystem coordFlag)
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file, CoordinateSystem coordFlag)
 Add a texture mapped rectangle by giving the coordinates of its center.
 
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const char *texture_file, CoordinateSystem coordFlag)
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const char *texture_file, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its center - rectangle is colored by and RGB color value but is masked by the alpha channel of a PNG image file.
 
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const Glyph *glyph, CoordinateSystem coordFlag)
void addRectangleByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, const Glyph *glyph, CoordinateSystem coordFlag)
 Add a texture masked rectangle by giving the coordinates of its center.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const char *texture_file, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const char *texture_file, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const char *texture_file, const std::vector< helios::vec2 > &uvs, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const char *texture_file, const std::vector< helios::vec2 > &uvs, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices and color by texture map.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, const char *texture_file, const std::vector< helios::vec2 > &uvs, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, const char *texture_file, const std::vector< helios::vec2 > &uvs, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices and mask by texture map transparency channel, but color by R-G-B value.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, const char *texture_file, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, const char *texture_file, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices - rectangle is colored by an RGB color value but is masked by the alpha channel of a PNG image file.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, const Glyph *glyph, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBcolor &color, const Glyph *glyph, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices.
 
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBAcolor &color, const Glyph *glyph, CoordinateSystem coordFlag)
void addRectangleByVertices (const std::vector< helios::vec3 > &vertices, const helios::RGBAcolor &color, const Glyph *glyph, CoordinateSystem coordFlag)
 Add a rectangle by giving the coordinates of its four vertices.
 
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color, CoordinateSystem coordFlag)
 Add a triangle by giving the coordinates of its three vertices.
 
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a triangle by giving the coordinates of its three vertices.
 
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char *texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, CoordinateSystem coordFlag)
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char *texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, CoordinateSystem coordFlag)
 Add a triangle by giving the coordinates of its three vertices and color by texture map.
 
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char *texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char *texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a triangle by giving the coordinates of its three vertices and color by a constant color, but mask using transparency channel of texture map.
 
void addVoxelByCenter (const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
void addVoxelByCenter (const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color, CoordinateSystem coordFlag)
 Add a voxel by giving the coordinates of its center.
 
void addVoxelByCenter (const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addVoxelByCenter (const helios::vec3 &center, const helios::vec3 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a voxel by giving the coordinates of its center.
 
void addDiskByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
void addDiskByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
 Add a disk by giving the coordinates of its center.
 
void addDiskByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addDiskByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a disk by giving the coordinates of its center.
 
void addDiskByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const char *texture_file, CoordinateSystem coordFlag)
void addDiskByCenter (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, uint Ndivisions, const char *texture_file, CoordinateSystem coordFlag)
 Add a texture mapped disk by giving the coordinates of its center.
 
void addLine (const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
void addLine (const helios::vec3 &start, const helios::vec3 &end, const helios::RGBcolor &color, uint linewidth, CoordinateSystem coordFlag)
 Add Lines by giving the coordinates of points along the Lines.
 
void addLine (const helios::vec3 &start, const helios::vec3 &end, const helios::RGBAcolor &color, uint linewidth, CoordinateSystem coordFlag)
void addLine (const helios::vec3 &start, const helios::vec3 &end, const helios::RGBAcolor &color, uint linewidth, CoordinateSystem coordFlag)
 Add Lines by giving the coordinates of points along the Lines.
 
void addPoint (const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
void addPoint (const helios::vec3 &position, const helios::RGBcolor &color, uint pointsize, CoordinateSystem coordFlag)
 Add a point by giving its coordinates and size.
 
void addPoint (const helios::vec3 &position, const helios::RGBAcolor &color, uint pointsize, CoordinateSystem coordFlag)
void addPoint (const helios::vec3 &position, const helios::RGBAcolor &color, uint pointsize, CoordinateSystem coordFlag)
 Add a point by giving its coordinates and size.
 
void addSphereByCenter (float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
void addSphereByCenter (float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBcolor &color, CoordinateSystem coordFlag)
 Add a sphere by giving the radius and center.
 
void addSphereByCenter (float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
void addSphereByCenter (float radius, const helios::vec3 &center, uint Ndivisions, const helios::RGBAcolor &color, CoordinateSystem coordFlag)
 Add a sphere by giving the radius and center.
 
void addSkyDomeByCenter (float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
void addSkyDomeByCenter (float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file)
 Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
 
 DEPRECATED (void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file, int layer))
 DEPRECATED (void addSkyDomeByCenter(float radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file, int layer))
 Add a Sky Dome, which is a hemispherical dome colored by a sky texture map.
 
void addTextboxByCenter (const char *textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char *fontname, CoordinateSystem coordFlag)
void addTextboxByCenter (const char *textstring, const helios::vec3 &center, const helios::SphericalCoord &rotation, const helios::RGBcolor &fontcolor, uint fontsize, const char *fontname, CoordinateSystem coordFlag)
 Add a text box by giving the coordinates of its center.
 
void addCoordinateAxes ()
void addCoordinateAxes ()
 Add a coordinate axis with at the origin with unit length.
 
void addCoordinateAxes (const helios::vec3 &origin, const helios::vec3 &length, const std::string &sign)
void addCoordinateAxes (const helios::vec3 &origin, const helios::vec3 &length, const std::string &sign)
 Add a coordinate axis.
 
void addGridWireFrame (const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv)
void addGridWireFrame (const helios::vec3 &center, const helios::vec3 &size, const helios::int3 &subdiv)
 Add a coordinate axis.
 
void enableColorbar ()
void enableColorbar ()
 Enable the colorbar.
 
void disableColorbar ()
void disableColorbar ()
 Disable the colorbar.
 
void setColorbarPosition (helios::vec3 position)
void setColorbarPosition (helios::vec3 position)
 Set the position of the colorbar in normalized window coordinates (0-1)
 
void setColorbarSize (helios::vec2 size)
void setColorbarSize (helios::vec2 size)
 Set the size of the colorbar in normalized window units (0-1)
 
void setColorbarRange (float cmin, float cmax)
void setColorbarRange (float cmin, float cmax)
 Set the range of the Colorbar.
 
void setColorbarTicks (const std::vector< float > &ticks)
void setColorbarTicks (const std::vector< float > &ticks)
 Set the values in the colorbar where ticks and labels should be placed.
 
void setColorbarTitle (const char *title)
void setColorbarTitle (const char *title)
 Set the title of the Colorbar.
 
void setColorbarFontColor (helios::RGBcolor color)
void setColorbarFontColor (helios::RGBcolor color)
 Set the RGB color of the colorbar text.
 
void setColorbarFontSize (uint font_size)
void setColorbarFontSize (uint font_size)
 Set the font size of the colorbar text.
 
void setColormap (Ctable colormap_name)
void setColormap (Ctable colormap_name)
 Set the colormap used in Colorbar/visualization based on pre-defined colormaps.
 
void setColormap (const std::vector< helios::RGBcolor > &colors, const std::vector< float > &divisions)
void setColormap (const std::vector< helios::RGBcolor > &colors, const std::vector< float > &divisions)
 Set the colormap used in Colorbar/visualization based on a custom colormap.
 
Colormap getCurrentColormap () const
Colormap getCurrentColormap () const
 Get the current colormap used in Colorbar/visualization.
 
void buildContextGeometry (helios::Context *context_ptr)
void buildContextGeometry (helios::Context *context_ptr)
 Add all geometry from the Context to the visualizer.
 
void buildContextGeometry (helios::Context *context_ptr, const std::vector< uint > &UUIDs)
void buildContextGeometry (helios::Context *context_ptr, const std::vector< uint > &UUIDs)
 Add select geometry from the Context to the visualizer by their UUIDs.
 
void colorContextPrimitivesByData (const char *data_name)
void colorContextPrimitivesByData (const char *data_name)
 Color primitives from Context by color mapping their ‘Primitive Data’.
 
void colorContextPrimitivesByData (const char *data_name, const std::vector< uint > &UUIDs)
void colorContextPrimitivesByData (const char *data_name, const std::vector< uint > &UUIDs)
 Color primitives from Context by color mapping their ‘Primitive Data’.
 
void colorContextPrimitivesByObjectData (const char *data_name)
void colorContextPrimitivesByObjectData (const char *data_name)
 Color primitives from Context by color mapping their ‘Object Data’.
 
void colorContextPrimitivesByObjectData (const char *data_name, const std::vector< uint > &ObjIDs)
void colorContextPrimitivesByObjectData (const char *data_name, const std::vector< uint > &ObjIDs)
 Color primitives from Context by color mapping their ‘Object Data’.
 
void colorContextPrimitivesRandomly (const std::vector< uint > &UUIDs)
void colorContextPrimitivesRandomly (const std::vector< uint > &UUIDs)
 Color primitives from Context with a random color.
 
void colorContextPrimitivesRandomly ()
void colorContextPrimitivesRandomly ()
 Color primitives from Context with a random color.
 
void colorContextObjectsRandomly (const std::vector< uint > &ObjIDs)
void colorContextObjectsRandomly (const std::vector< uint > &ObjIDs)
 Color objects from Context with a random color.
 
void colorContextObjectsRandomly ()
void colorContextObjectsRandomly ()
 Color objects from Context with a random color.
 
void hideWatermark ()
void hideWatermark ()
 Make Helios logo watermark invisible.
 
void showWatermark ()
void showWatermark ()
 Make Helios logo watermark visible.
 
std::vector< helios::vec3 > plotInteractive ()
std::vector< helios::vec3 > plotInteractive ()
 Plot current geometry into an interactive graphics window.
 
void plotDepthMap ()
void plotDepthMap ()
 Plot the depth map (distance from camera to nearest object)
 
void plotUpdate ()
void plotUpdate ()
 Update the graphics window based on current geometry, then continue the program.
 
void plotUpdate (bool hide_window)
void plotUpdate (bool hide_window)
 Update the graphics window based on current geometry, then continue the program, with the option not to display the graphic window.
 
void printWindow ()
void printWindow ()
 Print the current graphics window to a JPEG image file. File will be given a default filename and saved to the current directory from which the executable was run.
 
void printWindow (const char *outfile)
void printWindow (const char *outfile)
 Print the current graphics window to a JPEG image file.
 
void getWindowPixelsRGB (uint *buffer)
void getWindowPixelsRGB (uint *buffer)
 Get R-G-B pixel data in the current display window.
 
void getDepthMap (float *buffer)
void getDepthMap (float *buffer)
 Get depth buffer data for the current display window.
 
void getWindowSize (uint &width, uint &height) const
void getWindowSize (uint &width, uint &height) const
 Get the size of the display window in pixels.
 
void getFramebufferSize (uint &width, uint &height) const
void getFramebufferSize (uint &width, uint &height) const
 Get the size of the framebuffer in pixels.
 
void clearGeometry ()
void clearGeometry ()
 Clear all geometry previously added to the visualizer.
 
void closeWindow ()
void closeWindow ()
 Close the graphics window.
 

Detailed Description

Class for visualization of simulation results.

-

Definition at line 265 of file Visualizer.h.

+

Definition at line 275 of file Visualizer.h.

Member Enumeration Documentation

◆ CoordinateSystem

@@ -396,7 +408,7 @@

- +
enum Visualizer::CoordinateSystemenum Visualizer::CoordinateSystem

@@ -409,7 +421,7 @@

Definition at line 310 of file Visualizer.h.

+

Definition at line 320 of file Visualizer.h.

@@ -420,7 +432,7 @@

- +
enum Visualizer::Ctableenum Visualizer::Ctable

@@ -443,7 +455,7 @@

Definition at line 321 of file Visualizer.h.

+

Definition at line 331 of file Visualizer.h.

@@ -454,7 +466,7 @@

- +
enum Visualizer::LightingModelenum Visualizer::LightingModel

@@ -469,7 +481,7 @@

Definition at line 372 of file Visualizer.h.

+

Definition at line 382 of file Visualizer.h.

@@ -486,8 +498,7 @@

Visualizer::Visualizer ( - uint  - Wdisplay) + uint Wdisplay) @@ -519,19 +530,12 @@

Visualizer::Visualizer ( - uint  - Wdisplay, + uint Wdisplay, - uint  - Hdisplay  - - - - ) - + uint Hdisplay )

@@ -558,25 +562,17 @@

Visualizer::Visualizer ( - uint  - Wdisplay, + uint Wdisplay, - uint  - Hdisplay, + uint Hdisplay, - int  - aliasing_samples  - - - - ) - + int aliasing_samples )

@@ -594,31 +590,22 @@

Visualizer::Visualizer ( - uint  - Wdisplay, + uint Wdisplay, - uint  - Hdisplay, + uint Hdisplay, - int  - aliasing_samples, + int aliasing_samples, - bool  - window_decorations  - - - - ) - + bool window_decorations )

@@ -638,13 +625,13 @@

Visualizer::~Visualizer ( - ) + )

-

Definition at line 668 of file Visualizer.cpp.

+

Definition at line 672 of file Visualizer.cpp.

@@ -658,7 +645,7 @@

void Visualizer::addCoordinateAxes ( - ) + ) @@ -666,7 +653,7 @@

Definition at line 2512 of file Visualizer.cpp.

+

Definition at line 2516 of file Visualizer.cpp.

@@ -679,25 +666,17 @@

void Visualizer::addCoordinateAxes ( - const helios::vec3 &  - origin, + const helios::vec3 & origin, - const helios::vec3 &  - length, + const helios::vec3 & length, - const std::string &  - sign  - - - - ) - + const std::string & sign )

@@ -712,7 +691,7 @@

Definition at line 2516 of file Visualizer.cpp.

+

Definition at line 2520 of file Visualizer.cpp.

@@ -725,43 +704,32 @@

void Visualizer::addDiskByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - uint  - Ndivisions, + uint Ndivisions, - const char *  - texture_file, + const char * texture_file, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )

@@ -778,7 +746,7 @@

Definition at line 1965 of file Visualizer.cpp.

+

Definition at line 1969 of file Visualizer.cpp.

@@ -791,43 +759,32 @@

void Visualizer::addDiskByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - uint  - Ndivisions, + uint Ndivisions, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )

@@ -844,7 +801,7 @@

Definition at line 1885 of file Visualizer.cpp.

+

Definition at line 1889 of file Visualizer.cpp.

@@ -857,43 +814,32 @@

void Visualizer::addDiskByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - uint  - Ndivisions, + uint Ndivisions, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )

@@ -910,7 +856,7 @@

Definition at line 1881 of file Visualizer.cpp.

+

Definition at line 1885 of file Visualizer.cpp.

@@ -923,25 +869,17 @@

void Visualizer::addGridWireFrame ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - const helios::int3 &  - subdiv  - - - - ) - + const helios::int3 & subdiv )

@@ -956,7 +894,7 @@

Definition at line 2554 of file Visualizer.cpp.

+

Definition at line 2558 of file Visualizer.cpp.

@@ -969,37 +907,27 @@

void Visualizer::addLine ( - const helios::vec3 &  - start, + const helios::vec3 & start, - const helios::vec3 &  - end, + const helios::vec3 & end, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - uint  - linewidth, + uint linewidth, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )

@@ -1016,7 +944,7 @@

Definition at line 2049 of file Visualizer.cpp.

+

Definition at line 2053 of file Visualizer.cpp.

@@ -1029,37 +957,27 @@

void Visualizer::addLine ( - const helios::vec3 &  - start, + const helios::vec3 & start, - const helios::vec3 &  - end, + const helios::vec3 & end, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - uint  - linewidth, + uint linewidth, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1076,7 +994,7 @@

Definition at line 2045 of file Visualizer.cpp.

+

Definition at line 2049 of file Visualizer.cpp.

@@ -1089,31 +1007,22 @@

void Visualizer::addPoint ( - const helios::vec3 &  - position, + const helios::vec3 & position, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - uint  - pointsize, + uint pointsize, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1129,7 +1038,7 @@

Definition at line 2108 of file Visualizer.cpp.

+

Definition at line 2112 of file Visualizer.cpp.

@@ -1142,31 +1051,22 @@

void Visualizer::addPoint ( - const helios::vec3 &  - position, + const helios::vec3 & position, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - uint  - pointsize, + uint pointsize, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1182,7 +1082,7 @@

Definition at line 2104 of file Visualizer.cpp.

+

Definition at line 2108 of file Visualizer.cpp.

@@ -1195,37 +1095,27 @@

void Visualizer::addRectangleByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const char *  - texture_file, + const char * texture_file, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1242,7 +1132,7 @@

Definition at line 1032 of file Visualizer.cpp.

+

Definition at line 1036 of file Visualizer.cpp.

@@ -1255,37 +1145,27 @@

void Visualizer::addRectangleByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1302,7 +1182,7 @@

Definition at line 1003 of file Visualizer.cpp.

+

Definition at line 1007 of file Visualizer.cpp.

@@ -1315,43 +1195,32 @@

void Visualizer::addRectangleByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const char *  - texture_file, + const char * texture_file, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1369,7 +1238,7 @@

Definition at line 1061 of file Visualizer.cpp.

+

Definition at line 1065 of file Visualizer.cpp.

@@ -1382,43 +1251,32 @@

void Visualizer::addRectangleByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const Glyph *  - glyph, + const Glyph * glyph, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1436,7 +1294,7 @@

Definition at line 1090 of file Visualizer.cpp.

+

Definition at line 1094 of file Visualizer.cpp.

@@ -1449,37 +1307,27 @@

void Visualizer::addRectangleByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1496,7 +1344,7 @@

Definition at line 999 of file Visualizer.cpp.

+

Definition at line 1003 of file Visualizer.cpp.

@@ -1509,31 +1357,22 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const char *  - texture_file, + const char * texture_file, - const std::vector< helios::vec2 > &  - uvs, + const std::vector< helios::vec2 > & uvs, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1549,7 +1388,7 @@

Definition at line 1229 of file Visualizer.cpp.

+

Definition at line 1233 of file Visualizer.cpp.

@@ -1562,25 +1401,17 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const char *  - texture_file, + const char * texture_file, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1595,7 +1426,7 @@

Definition at line 1219 of file Visualizer.cpp.

+

Definition at line 1223 of file Visualizer.cpp.

@@ -1608,31 +1439,22 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - const Glyph *  - glyph, + const Glyph * glyph, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1648,7 +1470,7 @@

Definition at line 1463 of file Visualizer.cpp.

+

Definition at line 1467 of file Visualizer.cpp.

@@ -1661,25 +1483,17 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1694,7 +1508,7 @@

Definition at line 1123 of file Visualizer.cpp.

+

Definition at line 1127 of file Visualizer.cpp.

@@ -1707,37 +1521,27 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const char *  - texture_file, + const char * texture_file, - const std::vector< helios::vec2 > &  - uvs, + const std::vector< helios::vec2 > & uvs, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1754,7 +1558,7 @@

Definition at line 1347 of file Visualizer.cpp.

+

Definition at line 1351 of file Visualizer.cpp.

@@ -1767,31 +1571,22 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const char *  - texture_file, + const char * texture_file, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1807,7 +1602,7 @@

Definition at line 1336 of file Visualizer.cpp.

+

Definition at line 1340 of file Visualizer.cpp.

@@ -1820,31 +1615,22 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - const Glyph *  - glyph, + const Glyph * glyph, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1860,7 +1646,7 @@

Definition at line 1459 of file Visualizer.cpp.

+

Definition at line 1463 of file Visualizer.cpp.

@@ -1873,25 +1659,17 @@

void Visualizer::addRectangleByVertices ( - const std::vector< helios::vec3 > &  - vertices, + const std::vector< helios::vec3 > & vertices, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -1906,7 +1684,7 @@

Definition at line 1119 of file Visualizer.cpp.

+

Definition at line 1123 of file Visualizer.cpp.

@@ -1919,31 +1697,22 @@

void Visualizer::addSkyDomeByCenter ( - float  - radius, + float radius, - const helios::vec3 &  - center, + const helios::vec3 & center, - uint  - Ndivisions, + uint Ndivisions, - const char *  - texture_file  - - - - ) - + const char * texture_file )
@@ -1959,7 +1728,7 @@

Definition at line 2200 of file Visualizer.cpp.

+

Definition at line 2204 of file Visualizer.cpp.

@@ -1972,37 +1741,27 @@

void Visualizer::addSphereByCenter ( - float  - radius, + float radius, - const helios::vec3 &  - center, + const helios::vec3 & center, - uint  - Ndivisions, + uint Ndivisions, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2019,7 +1778,7 @@

Definition at line 2155 of file Visualizer.cpp.

+

Definition at line 2159 of file Visualizer.cpp.

@@ -2032,37 +1791,27 @@

void Visualizer::addSphereByCenter ( - float  - radius, + float radius, - const helios::vec3 &  - center, + const helios::vec3 & center, - uint  - Ndivisions, + uint Ndivisions, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2079,7 +1828,7 @@

Definition at line 2151 of file Visualizer.cpp.

+

Definition at line 2155 of file Visualizer.cpp.

@@ -2092,49 +1841,37 @@

void Visualizer::addTextboxByCenter ( - const char *  - textstring, + const char * textstring, - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBcolor &  - fontcolor, + const helios::RGBcolor & fontcolor, - uint  - fontsize, + uint fontsize, - const char *  - fontname, + const char * fontname, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2152,7 +1889,7 @@

Definition at line 2293 of file Visualizer.cpp.

+

Definition at line 2297 of file Visualizer.cpp.

@@ -2165,61 +1902,47 @@

void Visualizer::addTriangle ( - const helios::vec3 &  - vertex0, + const helios::vec3 & vertex0, - const helios::vec3 &  - vertex1, + const helios::vec3 & vertex1, - const helios::vec3 &  - vertex2, + const helios::vec3 & vertex2, - const char *  - texture_file, + const char * texture_file, - const helios::vec2 &  - uv0, + const helios::vec2 & uv0, - const helios::vec2 &  - uv1, + const helios::vec2 & uv1, - const helios::vec2 &  - uv2, + const helios::vec2 & uv2, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2240,7 +1963,7 @@

Definition at line 1752 of file Visualizer.cpp.

+

Definition at line 1756 of file Visualizer.cpp.

@@ -2253,55 +1976,42 @@

void Visualizer::addTriangle ( - const helios::vec3 &  - vertex0, + const helios::vec3 & vertex0, - const helios::vec3 &  - vertex1, + const helios::vec3 & vertex1, - const helios::vec3 &  - vertex2, + const helios::vec3 & vertex2, - const char *  - texture_file, + const char * texture_file, - const helios::vec2 &  - uv0, + const helios::vec2 & uv0, - const helios::vec2 &  - uv1, + const helios::vec2 & uv1, - const helios::vec2 &  - uv2, + const helios::vec2 & uv2, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2321,7 +2031,7 @@

Definition at line 1666 of file Visualizer.cpp.

+

Definition at line 1670 of file Visualizer.cpp.

@@ -2334,37 +2044,27 @@

void Visualizer::addTriangle ( - const helios::vec3 &  - vertex0, + const helios::vec3 & vertex0, - const helios::vec3 &  - vertex1, + const helios::vec3 & vertex1, - const helios::vec3 &  - vertex2, + const helios::vec3 & vertex2, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2381,7 +2081,7 @@

Definition at line 1579 of file Visualizer.cpp.

+

Definition at line 1583 of file Visualizer.cpp.

@@ -2394,37 +2094,27 @@

void Visualizer::addTriangle ( - const helios::vec3 &  - vertex0, + const helios::vec3 & vertex0, - const helios::vec3 &  - vertex1, + const helios::vec3 & vertex1, - const helios::vec3 &  - vertex2, + const helios::vec3 & vertex2, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2441,7 +2131,7 @@

Definition at line 1575 of file Visualizer.cpp.

+

Definition at line 1579 of file Visualizer.cpp.

@@ -2454,37 +2144,27 @@

void Visualizer::addVoxelByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBAcolor &  - color, + const helios::RGBAcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2500,7 +2180,7 @@

Definition at line 1855 of file Visualizer.cpp.

+

Definition at line 1859 of file Visualizer.cpp.

@@ -2513,37 +2193,27 @@

void Visualizer::addVoxelByCenter ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBcolor &  - color, + const helios::RGBcolor & color, - CoordinateSystem  - coordFlag  - - - - ) - + CoordinateSystem coordFlag )
@@ -2559,7 +2229,7 @@

Definition at line 1851 of file Visualizer.cpp.

+

Definition at line 1855 of file Visualizer.cpp.

@@ -2572,8 +2242,7 @@

void Visualizer::buildContextGeometry ( - helios::Context *  - context_ptr) + helios::Context * context_ptr) @@ -2587,7 +2256,7 @@

Definition at line 2701 of file Visualizer.cpp.

+

Definition at line 2705 of file Visualizer.cpp.

@@ -2600,19 +2269,12 @@

void Visualizer::buildContextGeometry ( - helios::Context *  - context_ptr, + helios::Context * context_ptr, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )
@@ -2626,7 +2288,7 @@

Definition at line 2706 of file Visualizer.cpp.

+

Definition at line 2710 of file Visualizer.cpp.

@@ -2639,7 +2301,7 @@

void Visualizer::clearGeometry ( - ) + ) @@ -2647,7 +2309,7 @@

Definition at line 955 of file Visualizer.cpp.

+

Definition at line 959 of file Visualizer.cpp.

@@ -2660,7 +2322,7 @@

void Visualizer::closeWindow ( - ) + ) @@ -2668,7 +2330,7 @@

Definition at line 973 of file Visualizer.cpp.

+

Definition at line 977 of file Visualizer.cpp.

@@ -2681,7 +2343,7 @@

void Visualizer::colorContextObjectsRandomly ( - ) + ) @@ -2690,7 +2352,7 @@

Note
Useful for visualizing individual objects
-

Definition at line 3272 of file Visualizer.cpp.

+

Definition at line 3276 of file Visualizer.cpp.

@@ -2703,8 +2365,7 @@

void Visualizer::colorContextObjectsRandomly ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs) @@ -2713,7 +2374,7 @@

Note
Useful for visualizing individual objects
-

Definition at line 3256 of file Visualizer.cpp.

+

Definition at line 3260 of file Visualizer.cpp.

@@ -2726,8 +2387,7 @@

void Visualizer::colorContextPrimitivesByData ( - const char *  - data_name) + const char * data_name) @@ -2742,7 +2402,7 @@

Note
If the data value does not exist for a certain primitive, a value of 0 is assumed.
-

Definition at line 3169 of file Visualizer.cpp.

+

Definition at line 3173 of file Visualizer.cpp.

@@ -2755,19 +2415,12 @@

void Visualizer::colorContextPrimitivesByData ( - const char *  - data_name, + const char * data_name, - const std::vector< uint > &  - UUIDs  - - - - ) - + const std::vector< uint > & UUIDs )
@@ -2782,7 +2435,7 @@

Note
If the data value does not exist for a certain primitive, a value of 0 is assumed.
-

Definition at line 3180 of file Visualizer.cpp.

+

Definition at line 3184 of file Visualizer.cpp.

@@ -2795,8 +2448,7 @@

void Visualizer::colorContextPrimitivesByObjectData ( - const char *  - data_name) + const char * data_name) @@ -2811,7 +2463,7 @@

Note
If the data value does not exist for a certain primitive, a value of 0 is assumed.
-

Definition at line 3191 of file Visualizer.cpp.

+

Definition at line 3195 of file Visualizer.cpp.

@@ -2824,19 +2476,12 @@

void Visualizer::colorContextPrimitivesByObjectData ( - const char *  - data_name, + const char * data_name, - const std::vector< uint > &  - ObjIDs  - - - - ) - + const std::vector< uint > & ObjIDs )
@@ -2851,7 +2496,7 @@

Note
If the data value does not exist for a certain primitive, a value of 0 is assumed.
-

Definition at line 3202 of file Visualizer.cpp.

+

Definition at line 3206 of file Visualizer.cpp.

@@ -2864,7 +2509,7 @@

void Visualizer::colorContextPrimitivesRandomly ( - ) + ) @@ -2873,7 +2518,7 @@

Note
Useful for visualizing individual primitives that are part of compound objects
-

Definition at line 3234 of file Visualizer.cpp.

+

Definition at line 3238 of file Visualizer.cpp.

@@ -2886,8 +2531,7 @@

void Visualizer::colorContextPrimitivesRandomly ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -2902,7 +2546,7 @@

Note
Useful for visualizing individual primitives that are part of compound objects
-

Definition at line 3213 of file Visualizer.cpp.

+

Definition at line 3217 of file Visualizer.cpp.

@@ -2915,8 +2559,7 @@

Visualizer::DEPRECATED ( - void   - addSkyDomeByCenterfloat radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file, int layer) + void addSkyDomeByCenterfloat radius, const helios::vec3 &center, uint Ndivisions, const char *texture_file, int layer) @@ -2936,8 +2579,7 @@

void Visualizer::disableColorbar ( - void  - ) + void ) @@ -2945,7 +2587,7 @@

Definition at line 2594 of file Visualizer.cpp.

+

Definition at line 2598 of file Visualizer.cpp.

@@ -2958,7 +2600,7 @@

void Visualizer::disableMessages ( - ) + ) @@ -2966,7 +2608,7 @@

Definition at line 770 of file Visualizer.cpp.

+

Definition at line 774 of file Visualizer.cpp.

@@ -2979,8 +2621,7 @@

void Visualizer::enableColorbar ( - void  - ) + void ) @@ -2988,7 +2629,7 @@

Definition at line 2590 of file Visualizer.cpp.

+

Definition at line 2594 of file Visualizer.cpp.

@@ -3001,7 +2642,7 @@

void Visualizer::enableMessages ( - ) + ) @@ -3009,7 +2650,7 @@

Definition at line 766 of file Visualizer.cpp.

+

Definition at line 770 of file Visualizer.cpp.

@@ -3022,7 +2663,7 @@

Colormap Visualizer::getCurrentColormap ( - ) + ) const @@ -3030,7 +2671,7 @@

Definition at line 2697 of file Visualizer.cpp.

+

Definition at line 2701 of file Visualizer.cpp.

@@ -3043,8 +2684,7 @@

void Visualizer::getDepthMap ( - float *  - buffer) + float * buffer) @@ -3057,9 +2697,9 @@

Note
The function plotDepthMap() must be called prior to getDepthMap().
+
Note
The function plotDepthMap() must be called prior to getDepthMap().
-

Definition at line 930 of file Visualizer.cpp.

+

Definition at line 934 of file Visualizer.cpp.

@@ -3072,32 +2712,24 @@

void Visualizer::getDomainBoundingBox ( - helios::vec2 &  - xbounds, + helios::vec2 & xbounds, - helios::vec2 &  - ybounds, + helios::vec2 & ybounds, - helios::vec2 &  - zbounds  - - - - ) - const + helios::vec2 & zbounds ) const

Get a box that bounds all primitives in the domain.

-

Definition at line 795 of file Visualizer.cpp.

+

Definition at line 799 of file Visualizer.cpp.

@@ -3110,7 +2742,7 @@

float Visualizer::getDomainBoundingRadius ( - ) + ) const @@ -3118,7 +2750,7 @@

Definition at line 847 of file Visualizer.cpp.

+

Definition at line 851 of file Visualizer.cpp.

@@ -3131,19 +2763,12 @@

void Visualizer::getFramebufferSize ( - uint &  - width, + uint & width, - uint &  - height  - - - - ) - const + uint & height ) const
@@ -3157,7 +2782,7 @@

Definition at line 950 of file Visualizer.cpp.

+

Definition at line 954 of file Visualizer.cpp.

@@ -3170,8 +2795,7 @@

void Visualizer::getWindowPixelsRGB ( - uint *  - buffer) + uint * buffer) @@ -3185,7 +2809,7 @@

Definition at line 899 of file Visualizer.cpp.

+

Definition at line 903 of file Visualizer.cpp.

@@ -3198,19 +2822,12 @@

void Visualizer::getWindowSize ( - uint &  - width, + uint & width, - uint &  - height  - - - - ) - const + uint & height ) const
@@ -3224,7 +2841,7 @@

Definition at line 945 of file Visualizer.cpp.

+

Definition at line 949 of file Visualizer.cpp.

@@ -3237,7 +2854,7 @@

void Visualizer::hideWatermark ( - ) + ) @@ -3245,7 +2862,7 @@

Definition at line 978 of file Visualizer.cpp.

+

Definition at line 982 of file Visualizer.cpp.

@@ -3258,7 +2875,7 @@

void Visualizer::plotDepthMap ( - ) + ) @@ -3266,7 +2883,7 @@

Definition at line 3722 of file Visualizer.cpp.

+

Definition at line 3733 of file Visualizer.cpp.

@@ -3279,7 +2896,7 @@

std::vector< helios::vec3 > Visualizer::plotInteractive ( - ) + ) @@ -3287,7 +2904,7 @@

Definition at line 3295 of file Visualizer.cpp.

+

Definition at line 3306 of file Visualizer.cpp.

@@ -3300,7 +2917,7 @@

void Visualizer::plotUpdate ( - ) + ) @@ -3308,7 +2925,7 @@

Definition at line 3578 of file Visualizer.cpp.

+

Definition at line 3589 of file Visualizer.cpp.

@@ -3321,8 +2938,7 @@

void Visualizer::plotUpdate ( - bool  - hide_window) + bool hide_window) @@ -3336,7 +2952,7 @@

Definition at line 3582 of file Visualizer.cpp.

+

Definition at line 3593 of file Visualizer.cpp.

@@ -3349,7 +2965,7 @@

void Visualizer::printWindow ( - ) + ) @@ -3357,7 +2973,7 @@

Definition at line 875 of file Visualizer.cpp.

+

Definition at line 879 of file Visualizer.cpp.

@@ -3370,8 +2986,7 @@

void Visualizer::printWindow ( - const char *  - outfile) + const char * outfile) @@ -3386,7 +3001,7 @@

Note
If outfile does not have extension ‘.jpg’, it will be appended to the file name.
-

Definition at line 890 of file Visualizer.cpp.

+

Definition at line 894 of file Visualizer.cpp.

@@ -3399,7 +3014,7 @@

int Visualizer::selfTest ( - ) + ) @@ -3407,7 +3022,7 @@

Visualizer self-test routine.

-

Definition at line 690 of file Visualizer.cpp.

+

Definition at line 694 of file Visualizer.cpp.

@@ -3420,8 +3035,7 @@

void Visualizer::setBackgroundColor ( - const helios::RGBcolor &  - color) + const helios::RGBcolor & color) @@ -3435,7 +3049,7 @@

Definition at line 871 of file Visualizer.cpp.

+

Definition at line 875 of file Visualizer.cpp.

@@ -3448,8 +3062,7 @@

void Visualizer::setCameraFieldOfView ( - float  - angle_FOV) + float angle_FOV) @@ -3463,7 +3076,7 @@

Definition at line 784 of file Visualizer.cpp.

+

Definition at line 788 of file Visualizer.cpp.

@@ -3476,19 +3089,12 @@

void Visualizer::setCameraPosition ( - const helios::SphericalCoord &  - cameraAngle, + const helios::SphericalCoord & cameraAngle, - const helios::vec3 &  - lookAt  - - - - ) - + const helios::vec3 & lookAt )
@@ -3503,7 +3109,7 @@

Definition at line 779 of file Visualizer.cpp.

+

Definition at line 783 of file Visualizer.cpp.

@@ -3516,19 +3122,12 @@

void Visualizer::setCameraPosition ( - const helios::vec3 &  - cameraPosition, + const helios::vec3 & cameraPosition, - const helios::vec3 &  - lookAt  - - - - ) - + const helios::vec3 & lookAt )
@@ -3542,7 +3141,7 @@

Definition at line 774 of file Visualizer.cpp.

+

Definition at line 778 of file Visualizer.cpp.

@@ -3555,8 +3154,7 @@

void Visualizer::setColorbarFontColor ( - helios::RGBcolor  - color) + helios::RGBcolor color) @@ -3570,7 +3168,7 @@

Definition at line 2661 of file Visualizer.cpp.

+

Definition at line 2665 of file Visualizer.cpp.

@@ -3583,8 +3181,7 @@

void Visualizer::setColorbarFontSize ( - uint  - font_size) + uint font_size) @@ -3598,7 +3195,7 @@

Definition at line 2654 of file Visualizer.cpp.

+

Definition at line 2658 of file Visualizer.cpp.

@@ -3611,8 +3208,7 @@

void Visualizer::setColorbarPosition ( - helios::vec3  - position) + helios::vec3 position) @@ -3626,7 +3222,7 @@

Definition at line 2598 of file Visualizer.cpp.

+

Definition at line 2602 of file Visualizer.cpp.

@@ -3639,19 +3235,12 @@

void Visualizer::setColorbarRange ( - float  - cmin, + float cmin, - float  - cmax  - - - - ) - + float cmax )
@@ -3665,7 +3254,7 @@

Definition at line 2612 of file Visualizer.cpp.

+

Definition at line 2616 of file Visualizer.cpp.

@@ -3678,8 +3267,7 @@

void Visualizer::setColorbarSize ( - helios::vec2  - size) + helios::vec2 size) @@ -3693,7 +3281,7 @@

Definition at line 2605 of file Visualizer.cpp.

+

Definition at line 2609 of file Visualizer.cpp.

@@ -3706,8 +3294,7 @@

void Visualizer::setColorbarTicks ( - const std::vector< float > &  - ticks) + const std::vector< float > & ticks) @@ -3722,7 +3309,7 @@

Note
If tick values are outside of the colorbar range (see setColorBarRange()), the colorbar will be automatically expanded to fit the tick values.
-

Definition at line 2621 of file Visualizer.cpp.

+

Definition at line 2625 of file Visualizer.cpp.

@@ -3735,8 +3322,7 @@

void Visualizer::setColorbarTitle ( - const char *  - title) + const char * title) @@ -3750,7 +3336,7 @@

Definition at line 2650 of file Visualizer.cpp.

+

Definition at line 2654 of file Visualizer.cpp.

@@ -3763,19 +3349,12 @@

void Visualizer::setColormap ( - const std::vector< helios::RGBcolor > &  - colors, + const std::vector< helios::RGBcolor > & colors, - const std::vector< float > &  - divisions  - - - - ) - + const std::vector< float > & divisions )
@@ -3789,7 +3368,7 @@

Definition at line 2685 of file Visualizer.cpp.

+

Definition at line 2689 of file Visualizer.cpp.

@@ -3802,8 +3381,7 @@

void Visualizer::setColormap ( - Ctable  - colormap_name) + Ctable colormap_name) @@ -3818,7 +3396,7 @@

Note
Valid colormaps are "COLORMAP_HOT", "COLORMAP_COOL", "COLORMAP_LAVA", "COLORMAP_RAINBOW", "COLORMAP_PARULA", "COLORMAP_GRAY".
-

Definition at line 2665 of file Visualizer.cpp.

+

Definition at line 2669 of file Visualizer.cpp.

@@ -3831,8 +3409,7 @@

void Visualizer::setLightDirection ( - const helios::vec3 &  - direction) + const helios::vec3 & direction) @@ -3846,7 +3423,7 @@

Definition at line 788 of file Visualizer.cpp.

+

Definition at line 792 of file Visualizer.cpp.

@@ -3859,8 +3436,7 @@

void Visualizer::setLightingModel ( - LightingModel  - lightingmodel) + LightingModel lightingmodel) @@ -3873,9 +3449,9 @@

See also
LightingModel
+
See also
LightingModel
-

Definition at line 861 of file Visualizer.cpp.

+

Definition at line 865 of file Visualizer.cpp.

@@ -3888,8 +3464,7 @@

void Visualizer::setLightIntensityFactor ( - float  - lightintensityfactor) + float lightintensityfactor) @@ -3903,7 +3478,7 @@

Definition at line 867 of file Visualizer.cpp.

+

Definition at line 871 of file Visualizer.cpp.

@@ -3916,7 +3491,7 @@

void Visualizer::showWatermark ( - ) + ) @@ -3924,7 +3499,7 @@

Definition at line 982 of file Visualizer.cpp.

+

Definition at line 986 of file Visualizer.cpp.

@@ -3935,7 +3510,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+ diff --git a/doc/html/class_voxel_intersection.html b/doc/html/class_voxel_intersection.html index 6b0721be2..4e6405a5b 100644 --- a/doc/html/class_voxel_intersection.html +++ b/doc/html/class_voxel_intersection.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,43 +105,43 @@ - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 VoxelIntersection (helios::Context *context)
 VoxelIntersection (helios::Context *context)
 Default constructor.
 
int selfTest (void)
int selfTest (void)
 Self-test function (unit tests)
 
void calculatePrimitiveVoxelIntersection (void)
void calculatePrimitiveVoxelIntersection (void)
 Calculate primitives that reside in all voxels for every primitive in the Context.
 
void calculatePrimitiveVoxelIntersection (std::vector< uint > UUIDs)
void calculatePrimitiveVoxelIntersection (std::vector< uint > UUIDs)
 Calculate primitives that reside in all voxels for a subset of primitives in the Context.
 
void disableMessages ()
void disableMessages ()
 Disable output messages (enabled by default)
 
void enableMessages ()
void enableMessages ()
 Re-enable output messages.
 
helios::vec3 linesIntersection (helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction)
helios::vec3 linesIntersection (helios::vec3 line1_point, helios::vec3 line1_direction, helios::vec3 line2_point, helios::vec3 line2_direction)
 Calculate the intersection point of two lines.
 
std::vector< uint > slicePrimitive (uint UUID, std::vector< helios::vec3 > voxel_face_vertices)
std::vector< uint > slicePrimitive (uint UUID, std::vector< helios::vec3 > voxel_face_vertices)
 Slice a primitive (patch or triangle) into multiple triangles using a defined plane (often a voxel face)
 
std::vector< uint > slicePrimitivesUsingGrid (std::vector< uint > UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
std::vector< uint > slicePrimitivesUsingGrid (std::vector< uint > UUIDs, helios::vec3 grid_center, helios::vec3 grid_size, helios::int3 grid_divisions)
 Slice a primitives based on a defined grid of voxels.
 
std::vector< std::vector< uint > > getCellPrimitives ()
std::vector< std::vector< uint > > getCellPrimitives ()
 get 2D vector storing the UUIDs within each grid cell
 
bool approxSame (float a, float b, float absTol, float relTol)
bool approxSame (float a, float b, float absTol, float relTol)
 compare two floating point numbers to within an absolute and relative error tolerance
 
bool approxSame (helios::vec3 a, helios::vec3 b, float absTol)
bool approxSame (helios::vec3 a, helios::vec3 b, float absTol)
 compare two vec3's to within an absolute and relative error tolerance
 
helios::vec2 interpolate_texture_UV_to_slice_point (helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
helios::vec2 interpolate_texture_UV_to_slice_point (helios::vec3 p1, helios::vec2 uv1, helios::vec3 p2, helios::vec2 uv2, helios::vec3 ps)
 find the uv coordinate of a slice point
 
@@ -146,8 +158,7 @@

VoxelIntersection::VoxelIntersection ( - helios::Context *  - context) + helios::Context * context) @@ -175,31 +186,22 @@

bool VoxelIntersection::approxSame ( - float  - a, + float a, - float  - b, + float b, - float  - absTol, + float absTol, - float  - relTol  - - - - ) - + float relTol )

@@ -229,25 +231,17 @@

bool VoxelIntersection::approxSame ( - helios::vec3  - a, + helios::vec3 a, - helios::vec3  - b, + helios::vec3 b, - float  - absTol  - - - - ) - + float absTol )

@@ -276,8 +270,7 @@

void VoxelIntersection::calculatePrimitiveVoxelIntersection ( - std::vector< uint >  - UUIDs) + std::vector< uint > UUIDs) @@ -304,8 +297,7 @@

void VoxelIntersection::calculatePrimitiveVoxelIntersection ( - void  - ) + void ) @@ -326,8 +318,7 @@

void VoxelIntersection::disableMessages ( - void  - ) + void ) @@ -348,8 +339,7 @@

void VoxelIntersection::enableMessages ( - void  - ) + void ) @@ -370,8 +360,7 @@

std::vector< std::vector< uint > > VoxelIntersection::getCellPrimitives ( - void  - ) + void ) @@ -394,37 +383,27 @@

helios::vec2 VoxelIntersection::interpolate_texture_UV_to_slice_point ( - helios::vec3  - p1, + helios::vec3 p1, - helios::vec2  - uv1, + helios::vec2 uv1, - helios::vec3  - p2, + helios::vec3 p2, - helios::vec2  - uv2, + helios::vec2 uv2, - helios::vec3  - ps  - - - - ) - + helios::vec3 ps )

@@ -455,31 +434,22 @@

helios::vec3 VoxelIntersection::linesIntersection ( - helios::vec3  - line1_point, + helios::vec3 line1_point, - helios::vec3  - line1_direction, + helios::vec3 line1_direction, - helios::vec3  - line2_point, + helios::vec3 line2_point, - helios::vec3  - line2_direction  - - - - ) - + helios::vec3 line2_direction )

@@ -510,8 +480,7 @@

int VoxelIntersection::selfTest ( - void  - ) + void ) @@ -532,19 +501,12 @@

std::vector< uint > VoxelIntersection::slicePrimitive ( - uint  - UUID, + uint UUID, - std::vector< helios::vec3 >  - voxel_face_vertices  - - - - ) - + std::vector< helios::vec3 > voxel_face_vertices )

@@ -572,31 +534,22 @@

std::vector< uint > VoxelIntersection::slicePrimitivesUsingGrid ( - std::vector< uint >  - UUIDs, + std::vector< uint > UUIDs, - helios::vec3  - grid_center, + helios::vec3 grid_center, - helios::vec3  - grid_size, + helios::vec3 grid_size, - helios::int3  - grid_divisions  - - - - ) - + helios::int3 grid_divisions )

@@ -625,7 +578,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/class_weber_penn_tree.html b/doc/html/class_weber_penn_tree.html index 627ccd80e..353e7af38 100644 --- a/doc/html/class_weber_penn_tree.html +++ b/doc/html/class_weber_penn_tree.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -93,55 +105,55 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 WeberPennTree (helios::Context *context)
 WeberPennTree (helios::Context *context)
 Weber-Penn Tree constructor.
 
int selfTest (void)
int selfTest (void)
 Unit testing routine.
 
void loadXML (const char *filename)
void loadXML (const char *filename)
 Load tree library from an XML file.
 
uint buildTree (const char *treename, helios::vec3 origin)
uint buildTree (const char *treename, helios::vec3 origin)
 Construct a Weber-Penn tree using a tree already in the library.
 
uint buildTree (const char *treename, helios::vec3 origin, float scale)
uint buildTree (const char *treename, helios::vec3 origin, float scale)
 Construct a Weber-Penn tree using a tree already in the library.
 
std::vector< uint > getTrunkUUIDs (const uint TreeID)
std::vector< uint > getTrunkUUIDs (const uint TreeID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the tree trunk.
 
std::vector< uint > getBranchUUIDs (const uint TreeID)
std::vector< uint > getBranchUUIDs (const uint TreeID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the tree branches.
 
std::vector< uint > getLeafUUIDs (const uint TreeID)
std::vector< uint > getLeafUUIDs (const uint TreeID)
 Get the unique universal identifiers (UUIDs) for the primitives that make up the tree leaves.
 
std::vector< uint > getAllUUIDs (const uint TreeID)
std::vector< uint > getAllUUIDs (const uint TreeID)
 Get the unique universal identifiers (UUIDs) for all primitives that make up the tree.
 
void setBranchRecursionLevel (const uint level)
void setBranchRecursionLevel (const uint level)
 Only create branch primitives up to a certain recursion level (leaves are still created for all levels).
 
void setTrunkSegmentResolution (const uint trunk_segs)
void setTrunkSegmentResolution (const uint trunk_segs)
 Set the radial triangle subdivisions for trunks.
 
void setBranchSegmentResolution (const uint branch_segs)
void setBranchSegmentResolution (const uint branch_segs)
 Set the radial triangle subdivisions for branches.
 
void setLeafSubdivisions (const helios::int2 leaf_segs)
void setLeafSubdivisions (const helios::int2 leaf_segs)
 Set the number of sub-patch divisions for leaves.
 
WeberPennTreeParameters getTreeParameters (const char *treename)
WeberPennTreeParameters getTreeParameters (const char *treename)
 Get the architectural parameters for a tree in the currently loaded library.
 
void setTreeParameters (const char *treename, const WeberPennTreeParameters parameters)
void setTreeParameters (const char *treename, const WeberPennTreeParameters parameters)
 Set the architectural parameters for a tree in the currently loaded library.
 
void seedRandomGenerator (const uint seed)
void seedRandomGenerator (const uint seed)
 Seed the random number generator. This can be useful for generating repeatable trees, say, within a loop.
 
void optionalOutputPrimitiveData (const char *label)
void optionalOutputPrimitiveData (const char *label)
 Add optional output primitive data values to the Context.
 
@@ -158,8 +170,7 @@

WeberPennTree::WeberPennTree ( - helios::Context *  - context) + helios::Context * context) @@ -187,19 +198,12 @@

uint WeberPennTree::buildTree ( - const char *  - treename, + const char * treename, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin )

@@ -211,7 +215,7 @@

See also
WeberPennTree::loadXML).
+
See also
WeberPennTree::loadXML).
Parameters
@@ -233,25 +237,17 @@

uint WeberPennTree::buildTree

- - + - - + - - - - - - - +
[in]origin(x,y,z) location to place tree. Note that this position is the location of the center of the trunk base.
(const char * treename, const char * treename,
helios::vec3 origin, helios::vec3 origin,
float scale 
)float scale )

@@ -263,7 +259,7 @@

See also
WeberPennTree::loadXML).
+
See also
WeberPennTree::loadXML).
Parameters
@@ -286,8 +282,7 @@

std::vector< uint > WeberPennTree::getAllUUIDs

- - +
[in]origin(x,y,z) location to place tree. Note that this position is the location of the center of the trunk base.
(const uint TreeID)const uint TreeID)
@@ -314,8 +309,7 @@

std::vector< uint > WeberPennTree::getBranchUUIDs ( - const uint  - TreeID) + const uint TreeID) @@ -342,8 +336,7 @@

std::vector< uint > WeberPennTree::getLeafUUIDs ( - const uint  - TreeID) + const uint TreeID) @@ -370,8 +363,7 @@

WeberPennTreeParameters WeberPennTree::getTreeParameters ( - const char *  - treename) + const char * treename) @@ -399,8 +391,7 @@

std::vector< uint > WeberPennTree::getTrunkUUIDs ( - const uint  - TreeID) + const uint TreeID) @@ -427,8 +418,7 @@

void WeberPennTree::loadXML ( - const char *  - filename) + const char * filename) @@ -455,8 +445,7 @@

void WeberPennTree::optionalOutputPrimitiveData ( - const char *  - label) + const char * label) @@ -483,8 +472,7 @@

void WeberPennTree::seedRandomGenerator ( - const uint  - seed) + const uint seed) @@ -511,8 +499,7 @@

int WeberPennTree::selfTest ( - void  - ) + void ) @@ -533,8 +520,7 @@

void WeberPennTree::setBranchRecursionLevel ( - const uint  - level) + const uint level) @@ -561,8 +547,7 @@

void WeberPennTree::setBranchSegmentResolution ( - const uint  - branch_segs) + const uint branch_segs) @@ -589,8 +574,7 @@

void WeberPennTree::setLeafSubdivisions ( - const helios::int2  - leaf_segs) + const helios::int2 leaf_segs) @@ -617,19 +601,12 @@

void WeberPennTree::setTreeParameters ( - const char *  - treename, + const char * treename, - const WeberPennTreeParameters  - parameters  - - - - ) - + const WeberPennTreeParameters parameters )

@@ -656,8 +633,7 @@

void WeberPennTree::setTrunkSegmentResolution ( - const uint  - trunk_segs) + const uint trunk_segs) @@ -682,7 +658,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classes.html b/doc/html/classes.html index 0dc950877..b66391e61 100644 --- a/doc/html/classes.html +++ b/doc/html/classes.html @@ -38,31 +38,43 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + +
+
+
-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/classhelios_1_1_box.html b/doc/html/classhelios_1_1_box.html index a12d9ed4c..c566b0893 100644 --- a/doc/html/classhelios_1_1_box.html +++ b/doc/html/classhelios_1_1_box.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Box compound object class. - More...

+ More...

#include <Context.h>

@@ -112,228 +124,228 @@ - + - - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Box (uint a_OID, const std::vector< uint > &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Box (uint a_OID, const std::vector< uint > &a_UUIDs, const int3 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Box () override=default
 Box destructor.
 
vec3 getSize () const
vec3 getSize () const
 Get the dimensions of the box object in each Cartesian direction.
 
vec3 getCenter () const
vec3 getCenter () const
 Get the Cartesian coordinates of the center of the box object.
 
helios::int3 getSubdivisionCount () const
helios::int3 getSubdivisionCount () const
 Get the number of sub-patch divisions of the box object in each Cartesian direction.
 
void setSubdivisionCount (const helios::int3 &subdiv)
void setSubdivisionCount (const helios::int3 &subdiv)
 Set the number of box sub-patch divisions.
 
float getVolume () const
float getVolume () const
 Get the volume of the box object.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -350,37 +362,27 @@

Box::Box ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - const int3 &  - a_subdiv, + const int3 & a_subdiv, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -401,7 +403,7 @@

vec3 Box::getCenter ( - ) + ) const @@ -422,7 +424,7 @@

vec3 Box::getSize ( - ) + ) const @@ -443,7 +445,7 @@

helios::int3 Box::getSubdivisionCount ( - ) + ) const @@ -464,7 +466,7 @@

float Box::getVolume ( - ) + ) const @@ -485,8 +487,7 @@

void Box::setSubdivisionCount ( - const helios::int3 &  - subdiv) + const helios::int3 & subdiv) @@ -504,7 +505,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -536,7 +537,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_box.png b/doc/html/classhelios_1_1_box.png index 6220820ec15393ce3f69d69f8ce0a3946c3c85ac..67fc3be264327c4258301c7d44a07ff323465a56 100644 GIT binary patch delta 21 dcmcb}a*<_%9oK^g5B~rEZ+bRt$wm)OCIEkk3m^ah delta 21 dcmcb}a*<_%9oK;a2mb&6A3W*uij5weOaOfS3nTyl diff --git a/doc/html/classhelios_1_1_compound_object.html b/doc/html/classhelios_1_1_compound_object.html index 66e14148f..1a7b6f45c 100644 --- a/doc/html/classhelios_1_1_compound_object.html +++ b/doc/html/classhelios_1_1_compound_object.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -113,205 +125,205 @@ - + - + - + - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

uint getObjectID () const
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class Context
class Context
 

Detailed Description

@@ -327,7 +339,7 @@

bool CompoundObject::arePrimitivesComplete ( - ) + ) const @@ -349,8 +361,7 @@

void CompoundObject::clearObjectData ( - const char *  - label) + const char * label) @@ -377,8 +388,7 @@

void CompoundObject::deleteChildPrimitive ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -405,8 +415,7 @@

void CompoundObject::deleteChildPrimitive ( - uint  - UUID) + uint UUID) @@ -433,8 +442,7 @@

bool CompoundObject::doesObjectContainPrimitive ( - uint  - UUID) + uint UUID) @@ -455,8 +463,7 @@

bool CompoundObject::doesObjectDataExist ( - const char *  - label) + const char * label) const @@ -484,7 +491,7 @@

float CompoundObject::getArea ( - ) + ) const @@ -505,7 +512,7 @@

helios::vec3 CompoundObject::getObjectCenter ( - ) + ) const @@ -526,19 +533,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - double &  - data  - - - - ) - const + double & data ) const

@@ -565,19 +565,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - float &  - data  - - - - ) - const + float & data ) const

@@ -604,19 +597,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - int &  - data  - - - - ) - const + int & data ) const

@@ -643,19 +629,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - int2 &  - data  - - - - ) - const + int2 & data ) const

@@ -682,19 +661,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - int3 &  - data  - - - - ) - const + int3 & data ) const

@@ -721,19 +693,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - int4 &  - data  - - - - ) - const + int4 & data ) const

@@ -760,19 +725,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::string &  - data  - - - - ) - const + std::string & data ) const

@@ -799,19 +757,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< double > &  - data  - - - - ) - const + std::vector< double > & data ) const

@@ -838,19 +789,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< float > &  - data  - - - - ) - const + std::vector< float > & data ) const

@@ -877,19 +821,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< int > &  - data  - - - - ) - const + std::vector< int > & data ) const

@@ -916,19 +853,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< int2 > &  - data  - - - - ) - const + std::vector< int2 > & data ) const

@@ -955,19 +885,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< int3 > &  - data  - - - - ) - const + std::vector< int3 > & data ) const

@@ -994,19 +917,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< int4 > &  - data  - - - - ) - const + std::vector< int4 > & data ) const

@@ -1033,19 +949,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< std::string > &  - data  - - - - ) - const + std::vector< std::string > & data ) const

@@ -1072,19 +981,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< uint > &  - data  - - - - ) - const + std::vector< uint > & data ) const

@@ -1111,19 +1013,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< vec2 > &  - data  - - - - ) - const + std::vector< vec2 > & data ) const

@@ -1150,19 +1045,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< vec3 > &  - data  - - - - ) - const + std::vector< vec3 > & data ) const

@@ -1189,19 +1077,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - std::vector< vec4 > &  - data  - - - - ) - const + std::vector< vec4 > & data ) const

@@ -1228,19 +1109,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - uint &  - data  - - - - ) - const + uint & data ) const

@@ -1267,19 +1141,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - vec2 &  - data  - - - - ) - const + vec2 & data ) const

@@ -1306,19 +1173,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - vec3 &  - data  - - - - ) - const + vec3 & data ) const

@@ -1338,19 +1198,12 @@

void CompoundObject::getObjectData ( - const char *  - label, + const char * label, - vec4 &  - data  - - - - ) - const + vec4 & data ) const

@@ -1377,8 +1230,7 @@

uint CompoundObject::getObjectDataSize ( - const char *  - label) + const char * label) const @@ -1406,8 +1258,7 @@

HeliosDataType CompoundObject::getObjectDataType ( - const char *  - label) + const char * label) const @@ -1436,7 +1287,7 @@

uint CompoundObject::getObjectID ( - ) + ) const @@ -1457,7 +1308,7 @@

helios::ObjectType CompoundObject::getObjectType ( - ) + ) const @@ -1478,7 +1329,7 @@

uint CompoundObject::getPrimitiveCount ( - ) + ) const @@ -1499,7 +1350,7 @@

std::vector< uint > CompoundObject::getPrimitiveUUIDs ( - ) + ) const @@ -1520,7 +1371,7 @@

std::string CompoundObject::getTextureFile ( - ) + ) const @@ -1541,8 +1392,7 @@

void CompoundObject::getTransformationMatrix ( - float(&)  - T[16]) + float(&) T[16]) const @@ -1569,7 +1419,7 @@

bool CompoundObject::hasTexture ( - ) + ) const @@ -1590,7 +1440,7 @@

std::vector< std::string > CompoundObject::listObjectData ( - ) + ) const @@ -1611,7 +1461,7 @@

void CompoundObject::overrideTextureColor ( - ) + ) @@ -1632,19 +1482,12 @@

void CompoundObject::rotate ( - float  - rotation_radians, + float rotation_radians, - const char *  - rotation_axis_xyz_string  - - - - ) - + const char * rotation_axis_xyz_string )

@@ -1671,25 +1514,17 @@

void CompoundObject::rotate ( - float  - rotation_radians, + float rotation_radians, - const helios::vec3 &  - origin, + const helios::vec3 & origin, - const helios::vec3 &  - rotation_axis_vector  - - - - ) - + const helios::vec3 & rotation_axis_vector )

@@ -1717,19 +1552,12 @@

void CompoundObject::rotate ( - float  - rotation_radians, + float rotation_radians, - const helios::vec3 &  - rotation_axis_vector  - - - - ) - + const helios::vec3 & rotation_axis_vector )

@@ -1756,8 +1584,7 @@

void CompoundObject::scale ( - const helios::vec3 &  - scale) + const helios::vec3 & scale) @@ -1784,8 +1611,7 @@

void CompoundObject::scaleAboutCenter ( - const helios::vec3 &  - scale) + const helios::vec3 & scale) @@ -1812,19 +1638,12 @@

void CompoundObject::scaleAboutPoint ( - const helios::vec3 &  - scale, + const helios::vec3 & scale, - const helios::vec3 &  - point  - - - - ) - + const helios::vec3 & point )

@@ -1851,8 +1670,7 @@

void CompoundObject::setColor ( - const helios::RGBAcolor &  - color) + const helios::RGBAcolor & color) @@ -1874,8 +1692,7 @@

void CompoundObject::setColor ( - const helios::RGBcolor &  - color) + const helios::RGBcolor & color) @@ -1897,19 +1714,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -1936,19 +1746,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -1975,19 +1778,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -2014,19 +1810,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -2053,19 +1842,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -2092,19 +1874,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -2131,19 +1906,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -2170,19 +1938,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -2209,19 +1970,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -2248,19 +2002,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -2287,19 +2034,12 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -2326,31 +2066,22 @@

void CompoundObject::setObjectData ( - const char *  - label, + const char * label, - HeliosDataType  - type, + HeliosDataType type, - uint  - size, + uint size, - void *  - data  - - - - ) - + void * data )

@@ -2380,8 +2111,7 @@

void CompoundObject::setPrimitiveUUIDs ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -2408,8 +2138,7 @@

void CompoundObject::setTransformationMatrix ( - float(&)  - T[16]) + float(&) T[16]) @@ -2436,8 +2165,7 @@

void CompoundObject::translate ( - const helios::vec3 &  - shift) + const helios::vec3 & shift) @@ -2464,19 +2192,19 @@

void CompoundObject::useTextureColor ( - ) + )

-

For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.

+

For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.

Definition at line 2331 of file Context.cpp.

-

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ Context

@@ -2509,7 +2237,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_compound_object.png b/doc/html/classhelios_1_1_compound_object.png index 8fc7c8138724f9e049943875c3bc4ea877bd5cda..d17b144483627d8719ef89ceaadec5b2daee32f0 100644 GIT binary patch delta 21 dcmaFJ_mFRb9oK^g5B~rEZ+bRt$wm)Jb^wE^3uyoV delta 21 dcmaFJ_mFRb9oK;a2mb&6A3W*uij5wU>;Qot3vB=Z diff --git a/doc/html/classhelios_1_1_cone.html b/doc/html/classhelios_1_1_cone.html index 4ba97864f..aaa8eb52a 100644 --- a/doc/html/classhelios_1_1_cone.html +++ b/doc/html/classhelios_1_1_cone.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Cone compound object class. - More...

+ More...

#include <Context.h>

@@ -112,246 +124,246 @@ - + - - + - + - + - + - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Cone (uint a_OID, const std::vector< uint > &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Cone (uint a_OID, const std::vector< uint > &a_UUIDs, const vec3 &a_node0, const vec3 &a_node1, float a_radius0, float a_radius1, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Cone () override=default
 Cone destructor.
 
std::vector< helios::vec3 > getNodeCoordinates () const
std::vector< helios::vec3 > getNodeCoordinates () const
 Get the Cartesian coordinates of each of the cone object nodes.
 
helios::vec3 getNodeCoordinate (int node_index) const
helios::vec3 getNodeCoordinate (int node_index) const
 Get the Cartesian coordinates of a cone object node.
 
std::vector< float > getNodeRadii () const
std::vector< float > getNodeRadii () const
 Get the radius at each of the cone object nodes.
 
float getNodeRadius (int node_index) const
float getNodeRadius (int node_index) const
 Get the radius of a cone object node.
 
uint getSubdivisionCount () const
uint getSubdivisionCount () const
 Get the number of sub-triangle divisions of the cone object.
 
void setSubdivisionCount (uint subdiv)
void setSubdivisionCount (uint subdiv)
 Set the number of radial sub-triangle divisions.
 
helios::vec3 getAxisUnitVector () const
helios::vec3 getAxisUnitVector () const
 Get a unit vector pointing in the direction of the cone central axis.
 
float getLength () const
float getLength () const
 Get the length of the cone along the axial direction.
 
void scaleLength (float S)
void scaleLength (float S)
 Method to scale the length of the cone.
 
void scaleGirth (float S)
void scaleGirth (float S)
 Method to scale the girth of the cone.
 
float getVolume () const
float getVolume () const
 Get the volume of the cone object.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -368,61 +380,47 @@

Cone::Cone ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - const vec3 &  - a_node0, + const vec3 & a_node0, - const vec3 &  - a_node1, + const vec3 & a_node1, - float  - a_radius0, + float a_radius0, - float  - a_radius1, + float a_radius1, - uint  - a_subdiv, + uint a_subdiv, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -443,7 +441,7 @@

helios::vec3 Cone::getAxisUnitVector ( - ) + ) const @@ -464,7 +462,7 @@

float Cone::getLength ( - ) + ) const @@ -485,8 +483,7 @@

helios::vec3 Cone::getNodeCoordinate ( - int  - node_index) + int node_index) const @@ -514,7 +511,7 @@

std::vector< helios::vec3 > Cone::getNodeCoordinates ( - ) + ) const @@ -536,7 +533,7 @@

std::vector< float > Cone::getNodeRadii ( - ) + ) const @@ -558,8 +555,7 @@

float Cone::getNodeRadius ( - int  - node_index) + int node_index) const @@ -587,7 +583,7 @@

uint Cone::getSubdivisionCount ( - ) + ) const @@ -608,7 +604,7 @@

float Cone::getVolume ( - ) + ) const @@ -629,8 +625,7 @@

void Cone::scaleGirth ( - float  - S) + float S) @@ -657,8 +652,7 @@

void Cone::scaleLength ( - float  - S) + float S) @@ -685,8 +679,7 @@

void Cone::setSubdivisionCount ( - uint  - subdiv) + uint subdiv) @@ -704,7 +697,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -736,7 +729,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_cone.png b/doc/html/classhelios_1_1_cone.png index 3c43c35d65d803e6f79fc2fac80a64c0513da419..ac18d5e3886444e5c132a8f3a983bcd391f633e8 100644 GIT binary patch delta 21 dcmaFN@|b0U9oK^g5B~rEZ+bRt$wm)pCIEtb3swLC delta 21 dcmaFN@|b0U9oK;a2mb&6A3W*uij5x9OaOoJ3t9jG diff --git a/doc/html/classhelios_1_1_context.html b/doc/html/classhelios_1_1_context.html index 6fe1eceac..024ec1463 100644 --- a/doc/html/classhelios_1_1_context.html +++ b/doc/html/classhelios_1_1_context.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-Data Structures | Public Member Functions | Static Public Member Functions
helios::Context Class Reference
@@ -98,1647 +109,1647 @@

Stores the state associated with simulation. - More...

+ More...

#include <Context.h>

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Public Member Functions

 Context ()
 Context ()
 Context default constructor.
 
 ~Context ()
 ~Context ()
 Context destructor.
 
+
 Context (const Context &)=delete
 Deleted copy constructor to prevent copying of Context.
 
+
void operator= (const Context &)=delete
 Deleted assignment operator to prevent copying of Context.
 
void seedRandomGenerator (uint seed)
void seedRandomGenerator (uint seed)
 Set seed for random generator.
 
std::minstd_rand0 * getRandomGenerator ()
std::minstd_rand0 * getRandomGenerator ()
 Get the random number generator engine.
 
void markGeometryClean ()
void markGeometryClean ()
 Mark the Context geometry as "clean", meaning that the geometry has not been modified since last set as clean.
 
void markGeometryDirty ()
void markGeometryDirty ()
 Mark the Context geometry as "dirty", meaning that the geometry has been modified since last set as clean.
 
bool isGeometryDirty () const
bool isGeometryDirty () const
 Query whether the Context geometry is "dirty", meaning has the geometry been modified since last set as clean.
 
uint addPatch ()
uint addPatch ()
 Add new default Patch geometric primitive, which is centered at the origin (0,0,0), has unit length and width, horizontal orientation, and black color.
 
uint addPatch (const helios::vec3 &center, const helios::vec2 &size)
uint addPatch (const helios::vec3 &center, const helios::vec2 &size)
 Add new Patch geometric primitive.
 
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation)
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation)
 Add new Patch geometric primitive.
 
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
 Add new Patch geometric primitive.
 
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
 Add new Patch geometric primitive.
 
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file)
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file)
 Add new Patch geometric primitive.
 
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file, const helios::vec2 &uv_center, const helios::vec2 &uv_size)
uint addPatch (const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file, const helios::vec2 &uv_center, const helios::vec2 &uv_size)
 Add new Patch geometric primitive.
 
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
 Add new Triangle geometric primitive.
 
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color)
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBcolor &color)
 Add new Triangle geometric primitive.
 
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBAcolor &color)
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const helios::RGBAcolor &color)
 Add new Triangle geometric primitive.
 
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char *texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2)
uint addTriangle (const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2, const char *texture_file, const helios::vec2 &uv0, const helios::vec2 &uv1, const helios::vec2 &uv2)
 Add new Triangle geometric primitive.
 
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size)
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size)
 Add new Voxel geometric primitive.
 
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size, const float &rotation)
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size, const float &rotation)
 Add new Voxel geometric primitive.
 
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size, const float &rotation, const helios::RGBcolor &color)
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size, const float &rotation, const helios::RGBcolor &color)
 Add new Voxel geometric primitive.
 
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size, const float &rotation, const helios::RGBAcolor &color)
uint addVoxel (const helios::vec3 &center, const helios::vec3 &size, const float &rotation, const helios::RGBAcolor &color)
 Add new Voxel geometric primitive.
 
void translatePrimitive (uint UUID, const vec3 &shift)
void translatePrimitive (uint UUID, const vec3 &shift)
 Translate a primitive using its UUID.
 
void translatePrimitive (const std::vector< uint > &UUIDs, const vec3 &shift)
void translatePrimitive (const std::vector< uint > &UUIDs, const vec3 &shift)
 Translate a group of primitives using a vector of UUIDs.
 
void rotatePrimitive (uint UUID, float rot, const char *axis)
void rotatePrimitive (uint UUID, float rot, const char *axis)
 Rotate a primitive about the x, y, or z axis using its UUID.
 
void rotatePrimitive (const std::vector< uint > &UUIDs, float rot, const char *axis)
void rotatePrimitive (const std::vector< uint > &UUIDs, float rot, const char *axis)
 Rotate a group of primitives about the x, y, or z axis using a vector of UUIDs.
 
void rotatePrimitive (uint UUID, float rot, const helios::vec3 &axis)
void rotatePrimitive (uint UUID, float rot, const helios::vec3 &axis)
 Rotate a primitive about an arbitrary axis passing through the origin using its UUID.
 
void rotatePrimitive (const std::vector< uint > &UUIDs, float rot, const vec3 &axis)
void rotatePrimitive (const std::vector< uint > &UUIDs, float rot, const vec3 &axis)
 Rotate a group of primitives about an arbitrary axis passing through the origin using a vector of UUIDs.
 
void rotatePrimitive (uint UUID, float rot, const helios::vec3 &origin, const helios::vec3 &axis)
void rotatePrimitive (uint UUID, float rot, const helios::vec3 &origin, const helios::vec3 &axis)
 Rotate a primitive about an arbitrary line (not necessarily passing through the origin) using its UUID.
 
void rotatePrimitive (const std::vector< uint > &UUIDs, float rot, const helios::vec3 &origin, const vec3 &axis)
void rotatePrimitive (const std::vector< uint > &UUIDs, float rot, const helios::vec3 &origin, const vec3 &axis)
 Rotate a group of primitives about an arbitrary line (not necessarily passing through the origin) using a vector of UUIDs.
 
void scalePrimitive (uint UUID, const helios::vec3 &S)
void scalePrimitive (uint UUID, const helios::vec3 &S)
 Scale a primitive using its UUID relative to the origin (0,0,0)
 
void scalePrimitive (const std::vector< uint > &UUIDs, const helios::vec3 &S)
void scalePrimitive (const std::vector< uint > &UUIDs, const helios::vec3 &S)
 Scale a group of primitives using a vector of UUIDs relative to the origin (0,0,0)
 
void scalePrimitiveAboutPoint (uint UUID, const helios::vec3 &S, const helios::vec3 point)
void scalePrimitiveAboutPoint (uint UUID, const helios::vec3 &S, const helios::vec3 point)
 Scale a primitive using its UUID about an arbitrary point in space.
 
void scalePrimitiveAboutPoint (const std::vector< uint > &UUIDs, const helios::vec3 &S, const helios::vec3 point)
void scalePrimitiveAboutPoint (const std::vector< uint > &UUIDs, const helios::vec3 &S, const helios::vec3 point)
 Scale a group of primitives using a vector of UUIDs about an arbitrary point in space.
 
void deletePrimitive (uint UUID)
void deletePrimitive (uint UUID)
 Delete a single primitive from the context.
 
void deletePrimitive (const std::vector< uint > &UUIDs)
void deletePrimitive (const std::vector< uint > &UUIDs)
 Delete a group of primitives from the context.
 
uint copyPrimitive (uint UUID)
uint copyPrimitive (uint UUID)
 Make a copy of a primitive from the context.
 
std::vector< uint > copyPrimitive (const std::vector< uint > &UUIDs)
std::vector< uint > copyPrimitive (const std::vector< uint > &UUIDs)
 Make a copy of a group of primitives from the context.
 
void copyPrimitiveData (uint sourceUUID, uint destinationUUID)
void copyPrimitiveData (uint sourceUUID, uint destinationUUID)
 copy all primitive data from one primitive to another
 
void renamePrimitiveData (uint UUID, const char *old_label, const char *new_label)
void renamePrimitiveData (uint UUID, const char *old_label, const char *new_label)
 Rename primitive data for a primitive.
 
void duplicatePrimitiveData (uint UUID, const char *old_label, const char *new_label)
void duplicatePrimitiveData (uint UUID, const char *old_label, const char *new_label)
 Duplicate/copy primitive data.
 
bool doesPrimitiveExist (uint UUID) const
bool doesPrimitiveExist (uint UUID) const
 Check if primitive exists for a given UUID.
 
bool doesPrimitiveExist (const std::vector< uint > &UUIDs) const
bool doesPrimitiveExist (const std::vector< uint > &UUIDs) const
 Check if ALL primitives exists for a vector UUIDs.
 
helios::vec2 getPatchSize (uint UUID) const
helios::vec2 getPatchSize (uint UUID) const
 Get the size of a patch element.
 
helios::vec3 getPatchCenter (uint UUID) const
helios::vec3 getPatchCenter (uint UUID) const
 Get the Cartesian (x,y,z) center position of a patch element.
 
helios::vec3 getTriangleVertex (uint UUID, uint number) const
helios::vec3 getTriangleVertex (uint UUID, uint number) const
 Get a single vertex of a Triangle based on an index.
 
void setTriangleVertices (uint UUID, const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
void setTriangleVertices (uint UUID, const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
 //! Manually set the Triangle vertices
 
helios::vec3 getVoxelCenter (uint UUID) const
helios::vec3 getVoxelCenter (uint UUID) const
 Get the Cartesian (x,y,z) center position of a voxel element.
 
helios::vec3 getVoxelSize (uint UUID) const
helios::vec3 getVoxelSize (uint UUID) const
 Get the size of a voxel element.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Get the total number of Primitives in the Context.
 
std::vector< uint > getAllUUIDs () const
std::vector< uint > getAllUUIDs () const
 Get all primitive UUIDs currently in the Context.
 
void hidePrimitive (const std::vector< uint > &UUIDs)
 Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()
void hidePrimitive (const std::vector< uint > &UUIDs)
 Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()
 
bool isPrimitiveHidden (uint UUID) const
bool isPrimitiveHidden (uint UUID) const
 Query whether a primitive is hidden.
 
void cleanDeletedUUIDs (std::vector< uint > &UUIDs) const
void cleanDeletedUUIDs (std::vector< uint > &UUIDs) const
 Delete UUIDs from vector if primitives no longer exist (1D vector)
 
void cleanDeletedUUIDs (std::vector< std::vector< uint > > &UUIDs) const
void cleanDeletedUUIDs (std::vector< std::vector< uint > > &UUIDs) const
 Delete UUIDs from vector if primitives no longer exist (2D vector)
 
void cleanDeletedUUIDs (std::vector< std::vector< std::vector< uint > > > &UUIDs) const
void cleanDeletedUUIDs (std::vector< std::vector< std::vector< uint > > > &UUIDs) const
 Delete UUIDs from vector if primitives no longer exist (3D vector)
 
void setPrimitiveData (const uint &UUID, const char *label, const int &data)
void setPrimitiveData (const uint &UUID, const char *label, const int &data)
 Add data value (int) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const uint &data)
void setPrimitiveData (const uint &UUID, const char *label, const uint &data)
 Add data value (uint) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const float &data)
void setPrimitiveData (const uint &UUID, const char *label, const float &data)
 Add data value (float) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const double &data)
void setPrimitiveData (const uint &UUID, const char *label, const double &data)
 Add data value (double) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const helios::vec2 &data)
void setPrimitiveData (const uint &UUID, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const helios::vec3 &data)
void setPrimitiveData (const uint &UUID, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const helios::vec4 &data)
void setPrimitiveData (const uint &UUID, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const helios::int2 &data)
void setPrimitiveData (const uint &UUID, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const helios::int3 &data)
void setPrimitiveData (const uint &UUID, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const helios::int4 &data)
void setPrimitiveData (const uint &UUID, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a primitive element.
 
void setPrimitiveData (const uint &UUID, const char *label, const std::string &data)
void setPrimitiveData (const uint &UUID, const char *label, const std::string &data)
 Add data value (string) associated with a primitive element.
 
void setPrimitiveData (const uint &UUIDs, const char *label, HeliosDataType type, uint size, void *data)
void setPrimitiveData (const uint &UUIDs, const char *label, HeliosDataType type, uint size, void *data)
 Add data associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const int &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const int &data)
 Add data value (int) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const uint &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const uint &data)
 Add data value (uint) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const float &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const float &data)
 Add data value (float) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const double &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const double &data)
 Add data value (double) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::vec2 &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::vec3 &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::vec4 &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::int2 &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::int3 &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::int4 &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a primitive element.
 
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const std::string &data)
void setPrimitiveData (const std::vector< uint > &UUIDs, const char *label, const std::string &data)
 Add data value (string) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const int &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const int &data)
 Add data value (int) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const uint &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const uint &data)
 Add data value (uint) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const float &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const float &data)
 Add data value (float) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const double &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const double &data)
 Add data value (double) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::vec2 &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::vec3 &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::vec4 &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::int2 &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::int3 &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::int4 &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const std::string &data)
void setPrimitiveData (const std::vector< std::vector< uint > > &UUIDs, const char *label, const std::string &data)
 Add data value (string) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const int &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const int &data)
 Add data value (int) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const uint &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const uint &data)
 Add data value (uint) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const float &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const float &data)
 Add data value (float) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const double &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const double &data)
 Add data value (double) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::vec2 &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::vec3 &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::vec4 &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::int2 &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::int3 &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::int4 &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a primitive element.
 
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const std::string &data)
void setPrimitiveData (const std::vector< std::vector< std::vector< uint > > > &UUIDs, const char *label, const std::string &data)
 Add data value (string) associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, int &data) const
void getPrimitiveData (uint UUID, const char *label, int &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< int > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< int > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, uint &data) const
void getPrimitiveData (uint UUID, const char *label, uint &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< uint > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< uint > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, float &data) const
void getPrimitiveData (uint UUID, const char *label, float &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< float > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< float > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, double &data) const
void getPrimitiveData (uint UUID, const char *label, double &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< double > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< double > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, vec2 &data) const
void getPrimitiveData (uint UUID, const char *label, vec2 &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< vec2 > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< vec2 > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, vec3 &data) const
void getPrimitiveData (uint UUID, const char *label, vec3 &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< vec3 > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< vec3 > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, vec4 &data) const
void getPrimitiveData (uint UUID, const char *label, vec4 &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< vec4 > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< vec4 > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, int2 &data) const
void getPrimitiveData (uint UUID, const char *label, int2 &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< int2 > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< int2 > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, int3 &data) const
void getPrimitiveData (uint UUID, const char *label, int3 &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< int3 > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< int3 > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, int4 &data) const
void getPrimitiveData (uint UUID, const char *label, int4 &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< int4 > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< int4 > &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::string &data) const
void getPrimitiveData (uint UUID, const char *label, std::string &data) const
 Get data associated with a primitive element.
 
void getPrimitiveData (uint UUID, const char *label, std::vector< std::string > &data) const
void getPrimitiveData (uint UUID, const char *label, std::vector< std::string > &data) const
 Get data associated with a primitive element.
 
HeliosDataType getPrimitiveDataType (uint UUID, const char *label) const
HeliosDataType getPrimitiveDataType (uint UUID, const char *label) const
 Get the Helios data type of primitive data.
 
uint getPrimitiveDataSize (uint UUID, const char *label) const
uint getPrimitiveDataSize (uint UUID, const char *label) const
 Get the size/length of primitive data.
 
bool doesPrimitiveDataExist (uint UUID, const char *label) const
bool doesPrimitiveDataExist (uint UUID, const char *label) const
 Check if primitive data 'label' exists.
 
void clearPrimitiveData (uint UUID, const char *label)
void clearPrimitiveData (uint UUID, const char *label)
 Clear primitive data for a single primitive based on its UUID.
 
void clearPrimitiveData (const std::vector< uint > &UUIDs, const char *label)
void clearPrimitiveData (const std::vector< uint > &UUIDs, const char *label)
 Clear primitive data for multiple primitives based on a vector of UUIDs.
 
PrimitiveType getPrimitiveType (uint UUID) const
PrimitiveType getPrimitiveType (uint UUID) const
 Method to get the Primitive type.
 
void setPrimitiveParentObjectID (uint UUID, uint objID)
void setPrimitiveParentObjectID (uint UUID, uint objID)
 Method to set the ID of the parent object the primitive belongs to (default is object 0)
 
void setPrimitiveParentObjectID (const std::vector< uint > &UUIDs, uint objID)
void setPrimitiveParentObjectID (const std::vector< uint > &UUIDs, uint objID)
 Method to set the ID of the parent object the primitive belongs to (default is object 0) for a vector of UUIDs.
 
uint getPrimitiveParentObjectID (uint UUID) const
uint getPrimitiveParentObjectID (uint UUID) const
 Method to return the ID of the parent object the primitive belongs to (default is object 0)
 
std::vector< uint > getUniquePrimitiveParentObjectIDs (const std::vector< uint > &UUIDs) const
std::vector< uint > getUniquePrimitiveParentObjectIDs (const std::vector< uint > &UUIDs) const
 Method to return unique parent object IDs for a vector of primitive UUIDs.
 
std::vector< uint > getUniquePrimitiveParentObjectIDs (const std::vector< uint > &UUIDs, bool include_ObjID_zero) const
std::vector< uint > getUniquePrimitiveParentObjectIDs (const std::vector< uint > &UUIDs, bool include_ObjID_zero) const
 Method to return unique parent object IDs for a vector of primitive UUIDs.
 
float getPrimitiveArea (uint UUID) const
float getPrimitiveArea (uint UUID) const
 Method to return the surface area of a Primitive.
 
void getPrimitiveBoundingBox (uint UUID, vec3 &min_corner, vec3 &max_corner) const
void getPrimitiveBoundingBox (uint UUID, vec3 &min_corner, vec3 &max_corner) const
 Get the axis-aligned bounding box for a single primitive.
 
void getPrimitiveBoundingBox (const std::vector< uint > &UUID, vec3 &min_corner, vec3 &max_corner) const
void getPrimitiveBoundingBox (const std::vector< uint > &UUID, vec3 &min_corner, vec3 &max_corner) const
 Get the axis-aligned bounding box for a group of primitives.
 
void hideObject (const std::vector< uint > &ObjIDs)
 Hide compound objects in the Context such that their object IDs are not returned in Context::getAllObjectIDs(), and are not counted in Context::getObjectCount()
void hideObject (const std::vector< uint > &ObjIDs)
 Hide compound objects in the Context such that their object IDs are not returned in Context::getAllObjectIDs(), and are not counted in Context::getObjectCount()
 
bool isObjectHidden (uint ObjID) const
bool isObjectHidden (uint ObjID) const
 Query if an object is hidden.
 
float getObjectArea (uint ObjID) const
float getObjectArea (uint ObjID) const
 Method to return the one-sided surface area of an object.
 
uint getObjectPrimitiveCount (uint ObjID) const
uint getObjectPrimitiveCount (uint ObjID) const
 Method to return the number of primitives contained in the object.
 
helios::vec3 getObjectCenter (uint ObjID) const
helios::vec3 getObjectCenter (uint ObjID) const
 Method to return the Cartesian (x,y,z) point of the center of a bounding box for the object.
 
void setObjectColor (uint ObjID, const helios::RGBcolor &color)
void setObjectColor (uint ObjID, const helios::RGBcolor &color)
 Method to set the diffuse color of an Object.
 
void setObjectColor (const std::vector< uint > &ObjIDs, const helios::RGBcolor &color)
void setObjectColor (const std::vector< uint > &ObjIDs, const helios::RGBcolor &color)
 Method to set the diffuse color of an Object for a vector of ObjIDs.
 
void setObjectColor (uint ObjID, const helios::RGBAcolor &color)
void setObjectColor (uint ObjID, const helios::RGBAcolor &color)
 Method to set the diffuse color of an Object with transparency.
 
void setObjectColor (const std::vector< uint > &ObjIDs, const helios::RGBAcolor &color)
void setObjectColor (const std::vector< uint > &ObjIDs, const helios::RGBAcolor &color)
 Method to set the diffuse color of an Object with transparency for a vector of ObjIDs.
 
std::string getObjectTextureFile (uint ObjID) const
std::string getObjectTextureFile (uint ObjID) const
 Method to return the texture map file of an Object.
 
void getObjectTransformationMatrix (uint ObjID, float(&T)[16]) const
void getObjectTransformationMatrix (uint ObjID, float(&T)[16]) const
 Method to return the Affine transformation matrix of an Object.
 
void setObjectTransformationMatrix (uint ObjID, float(&T)[16])
void setObjectTransformationMatrix (uint ObjID, float(&T)[16])
 Method to set the Affine transformation matrix of an Object.
 
void setObjectTransformationMatrix (const std::vector< uint > &ObjIDs, float(&T)[16])
void setObjectTransformationMatrix (const std::vector< uint > &ObjIDs, float(&T)[16])
 Method to set the Affine transformation matrix of an Object for a vector Object IDs.
 
bool objectHasTexture (uint ObjID) const
bool objectHasTexture (uint ObjID) const
 Method to check whether an Object has texture data.
 
bool doesObjectContainPrimitive (uint ObjID, uint UUID)
bool doesObjectContainPrimitive (uint ObjID, uint UUID)
 Method to check if an Object contains a Primitive.
 
void overrideObjectTextureColor (uint ObjID)
void overrideObjectTextureColor (uint ObjID)
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void overrideObjectTextureColor (const std::vector< uint > &ObjIDs)
void overrideObjectTextureColor (const std::vector< uint > &ObjIDs)
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useObjectTextureColor (uint ObjID)
void useObjectTextureColor (uint ObjID)
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is function reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
void useObjectTextureColor (const std::vector< uint > &ObjIDs)
void useObjectTextureColor (const std::vector< uint > &ObjIDs)
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is function reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
void getObjectBoundingBox (uint ObjID, vec3 &min_corner, vec3 &max_corner) const
void getObjectBoundingBox (uint ObjID, vec3 &min_corner, vec3 &max_corner) const
 Get the axis-aligned bounding box for a single object.
 
void getObjectBoundingBox (const std::vector< uint > &ObjID, vec3 &min_corner, vec3 &max_corner) const
void getObjectBoundingBox (const std::vector< uint > &ObjID, vec3 &min_corner, vec3 &max_corner) const
 Get the axis-aligned bounding box for a group of objects.
 
void printObjectInfo (uint ObjID) const
void printObjectInfo (uint ObjID) const
 Prints object properties to console (useful for debugging purposes)
 
std::vector< std::string > listObjectData (uint ObjID) const
std::vector< std::string > listObjectData (uint ObjID) const
 Return labels for all object data for this particular object.
 
std::vector< std::string > listPrimitiveData (uint UUID) const
std::vector< std::string > listPrimitiveData (uint UUID) const
 Return labels for all primitive data for this particular primitive.
 
float getPrimitiveSolidFraction (uint UUID) const
float getPrimitiveSolidFraction (uint UUID) const
 Get fraction of primitive surface area that is non-transparent.
 
helios::vec3 getPrimitiveNormal (uint UUID) const
helios::vec3 getPrimitiveNormal (uint UUID) const
 Method to return the normal vector of a Primitive.
 
void getPrimitiveTransformationMatrix (uint UUID, float(&T)[16]) const
void getPrimitiveTransformationMatrix (uint UUID, float(&T)[16]) const
 Method to return the Affine transformation matrix of a Primitive.
 
void setPrimitiveTransformationMatrix (uint UUID, float(&T)[16])
void setPrimitiveTransformationMatrix (uint UUID, float(&T)[16])
 Method to set the Affine transformation matrix of a Primitive.
 
void setPrimitiveTransformationMatrix (const std::vector< uint > &UUIDs, float(&T)[16])
void setPrimitiveTransformationMatrix (const std::vector< uint > &UUIDs, float(&T)[16])
 Method to set the Affine transformation matrix of a Primitive for a vector UUIDs.
 
std::vector< helios::vec3 > getPrimitiveVertices (uint UUID) const
std::vector< helios::vec3 > getPrimitiveVertices (uint UUID) const
 Method to return the (x,y,z) coordinates of the vertices of a Primitive.
 
helios::RGBcolor getPrimitiveColor (uint UUID) const
helios::RGBcolor getPrimitiveColor (uint UUID) const
 Method to return the diffuse color of a Primitive.
 
helios::RGBcolor getPrimitiveColorRGB (uint UUID) const
helios::RGBcolor getPrimitiveColorRGB (uint UUID) const
 Method to return the diffuse color of a Primitive.
 
helios::RGBAcolor getPrimitiveColorRGBA (uint UUID) const
helios::RGBAcolor getPrimitiveColorRGBA (uint UUID) const
 Method to return the diffuse color of a Primitive with transparency.
 
void setPrimitiveColor (uint UUID, const helios::RGBcolor &color)
void setPrimitiveColor (uint UUID, const helios::RGBcolor &color)
 Method to set the diffuse color of a Primitive.
 
void setPrimitiveColor (const std::vector< uint > &UUIDs, const helios::RGBcolor &color)
void setPrimitiveColor (const std::vector< uint > &UUIDs, const helios::RGBcolor &color)
 Method to set the diffuse color of a Primitive for a vector of UUIDs.
 
void setPrimitiveColor (uint UUID, const helios::RGBAcolor &color)
void setPrimitiveColor (uint UUID, const helios::RGBAcolor &color)
 Method to set the diffuse color of a Primitive with transparency.
 
void setPrimitiveColor (const std::vector< uint > &UUIDs, const helios::RGBAcolor &color)
void setPrimitiveColor (const std::vector< uint > &UUIDs, const helios::RGBAcolor &color)
 Method to set the diffuse color of a Primitive with transparency for a vector of UUIDs.
 
std::string getPrimitiveTextureFile (uint UUID) const
std::string getPrimitiveTextureFile (uint UUID) const
 Get the path to texture map file for primitive. If primitive does not have a texture map, the result will be an empty string.
 
void setPrimitiveTextureFile (uint UUID, const std::string &texturefile)
void setPrimitiveTextureFile (uint UUID, const std::string &texturefile)
 Set the texture map file for a primitive.
 
helios::int2 getPrimitiveTextureSize (uint UUID) const
helios::int2 getPrimitiveTextureSize (uint UUID) const
 Get the size (number of pixels) of primitive texture map image.
 
std::vector< vec2 > getPrimitiveTextureUV (uint UUID) const
std::vector< vec2 > getPrimitiveTextureUV (uint UUID) const
 Get u-v texture coordinates at primitive vertices.
 
bool primitiveTextureHasTransparencyChannel (uint UUID) const
bool primitiveTextureHasTransparencyChannel (uint UUID) const
 Check if primitive texture map has a transparency channel.
 
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData (uint UUID) const
const std::vector< std::vector< bool > > * getPrimitiveTextureTransparencyData (uint UUID) const
 Get the transparency channel pixel data from primitive texture map. If transparency channel does not exist, an error will be thrown.
 
void overridePrimitiveTextureColor (uint UUID)
void overridePrimitiveTextureColor (uint UUID)
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void overridePrimitiveTextureColor (const std::vector< uint > &UUIDs)
void overridePrimitiveTextureColor (const std::vector< uint > &UUIDs)
 Override the color in the texture map for multiple primitives, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void usePrimitiveTextureColor (uint UUID)
void usePrimitiveTextureColor (uint UUID)
 Use the texture map to color the primitive rather than the constant RGB color. This is function reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
void usePrimitiveTextureColor (const std::vector< uint > &UUIDs)
void usePrimitiveTextureColor (const std::vector< uint > &UUIDs)
 Use the texture map to color the primitives rather than the constant RGB color. This is function reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool isPrimitiveTextureColorOverridden (uint UUID) const
bool isPrimitiveTextureColorOverridden (uint UUID) const
 Check if color of texture map is overridden by the diffuse R-G-B color of the primitive.
 
void printPrimitiveInfo (uint UUID) const
void printPrimitiveInfo (uint UUID) const
 Prints primitive properties to console (useful for debugging purposes)
 
void setObjectData (uint objID, const char *label, const int &data)
void setObjectData (uint objID, const char *label, const int &data)
 Add data value (int) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const uint &data)
void setObjectData (uint objID, const char *label, const uint &data)
 Add data value (uint) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const float &data)
void setObjectData (uint objID, const char *label, const float &data)
 Add data value (float) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const double &data)
void setObjectData (uint objID, const char *label, const double &data)
 Add data value (double) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const helios::vec2 &data)
void setObjectData (uint objID, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const helios::vec3 &data)
void setObjectData (uint objID, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const helios::vec4 &data)
void setObjectData (uint objID, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const helios::int2 &data)
void setObjectData (uint objID, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const helios::int3 &data)
void setObjectData (uint objID, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const helios::int4 &data)
void setObjectData (uint objID, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a compound object.
 
void setObjectData (uint objID, const char *label, const std::string &data)
void setObjectData (uint objID, const char *label, const std::string &data)
 Add data value (string) associated with a compound object.
 
void setObjectData (uint objIDs, const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (uint objIDs, const char *label, HeliosDataType type, uint size, void *data)
 Add data associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const int &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const int &data)
 Add data value (int) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const uint &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const uint &data)
 Add data value (uint) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const float &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const float &data)
 Add data value (float) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const double &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const double &data)
 Add data value (double) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::vec2 &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::vec3 &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::vec4 &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::int2 &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::int3 &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::int4 &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a compound object.
 
void setObjectData (const std::vector< uint > &objIDs, const char *label, const std::string &data)
void setObjectData (const std::vector< uint > &objIDs, const char *label, const std::string &data)
 Add data value (string) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const int &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const int &data)
 Add data value (int) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const uint &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const uint &data)
 Add data value (uint) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const float &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const float &data)
 Add data value (float) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const double &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const double &data)
 Add data value (double) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::vec2 &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::vec3 &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::vec4 &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::int2 &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::int3 &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::int4 &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const std::string &data)
void setObjectData (const std::vector< std::vector< uint > > &objIDs, const char *label, const std::string &data)
 Add data value (string) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const int &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const int &data)
 Add data value (int) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const uint &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const uint &data)
 Add data value (uint) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const float &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const float &data)
 Add data value (float) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const double &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const double &data)
 Add data value (double) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::vec2 &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::vec3 &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::vec4 &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::int2 &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::int2 &data)
 Add data value (int2) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::int3 &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::int3 &data)
 Add data value (int3) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::int4 &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const helios::int4 &data)
 Add data value (int4) associated with a compound object.
 
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const std::string &data)
void setObjectData (const std::vector< std::vector< std::vector< uint > > > &objIDs, const char *label, const std::string &data)
 Add data value (string) associated with a compound object.
 
void getObjectData (uint objID, const char *label, int &data) const
void getObjectData (uint objID, const char *label, int &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< int > &data) const
void getObjectData (uint objID, const char *label, std::vector< int > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, uint &data) const
void getObjectData (uint objID, const char *label, uint &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< uint > &data) const
void getObjectData (uint objID, const char *label, std::vector< uint > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, float &data) const
void getObjectData (uint objID, const char *label, float &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< float > &data) const
void getObjectData (uint objID, const char *label, std::vector< float > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, double &data) const
void getObjectData (uint objID, const char *label, double &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< double > &data) const
void getObjectData (uint objID, const char *label, std::vector< double > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, vec2 &data) const
void getObjectData (uint objID, const char *label, vec2 &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< vec2 > &data) const
void getObjectData (uint objID, const char *label, std::vector< vec2 > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, vec3 &data) const
void getObjectData (uint objID, const char *label, vec3 &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< vec3 > &data) const
void getObjectData (uint objID, const char *label, std::vector< vec3 > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, vec4 &data) const
void getObjectData (uint objID, const char *label, vec4 &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< vec4 > &data) const
void getObjectData (uint objID, const char *label, std::vector< vec4 > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, int2 &data) const
void getObjectData (uint objID, const char *label, int2 &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< int2 > &data) const
void getObjectData (uint objID, const char *label, std::vector< int2 > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, int3 &data) const
void getObjectData (uint objID, const char *label, int3 &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< int3 > &data) const
void getObjectData (uint objID, const char *label, std::vector< int3 > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, int4 &data) const
void getObjectData (uint objID, const char *label, int4 &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< int4 > &data) const
void getObjectData (uint objID, const char *label, std::vector< int4 > &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::string &data) const
void getObjectData (uint objID, const char *label, std::string &data) const
 Get data associated with a compound object.
 
void getObjectData (uint objID, const char *label, std::vector< std::string > &data) const
void getObjectData (uint objID, const char *label, std::vector< std::string > &data) const
 Get data associated with a compound object.
 
HeliosDataType getObjectDataType (uint objID, const char *label) const
HeliosDataType getObjectDataType (uint objID, const char *label) const
 Get the Helios data type of primitive data.
 
uint getObjectDataSize (uint objID, const char *label) const
uint getObjectDataSize (uint objID, const char *label) const
 Get the size/length of primitive data.
 
bool doesObjectDataExist (uint objID, const char *label) const
bool doesObjectDataExist (uint objID, const char *label) const
 Check if primitive data 'label' exists.
 
void clearObjectData (uint objID, const char *label)
void clearObjectData (uint objID, const char *label)
 Clear primitive data for a single primitive based on its objID.
 
void clearObjectData (const std::vector< uint > &objIDs, const char *label)
void clearObjectData (const std::vector< uint > &objIDs, const char *label)
 Clear primitive data for multiple primitives based on a vector of objIDs.
 
bool areObjectPrimitivesComplete (uint objID) const
bool areObjectPrimitivesComplete (uint objID) const
 Method to query whether all object primitives are in tact.
 
void cleanDeletedObjectIDs (std::vector< uint > &objIDs) const
void cleanDeletedObjectIDs (std::vector< uint > &objIDs) const
 Delete Object IDs from vector if objects no longer exist (1D vector)
 
void cleanDeletedObjectIDs (std::vector< std::vector< uint > > &objIDs) const
void cleanDeletedObjectIDs (std::vector< std::vector< uint > > &objIDs) const
 Delete Object IDs from vector if objects no longer exist (2D vector)
 
void cleanDeletedObjectIDs (std::vector< std::vector< std::vector< uint > > > &objIDs) const
void cleanDeletedObjectIDs (std::vector< std::vector< std::vector< uint > > > &objIDs) const
 Delete Object IDs from vector if objects no longer exist (3D vector)
 
void setGlobalData (const char *label, const int &data)
void setGlobalData (const char *label, const int &data)
 Add global data value (int)
 
void setGlobalData (const char *label, const uint &data)
void setGlobalData (const char *label, const uint &data)
 Add global data value (uint)
 
void setGlobalData (const char *label, const float &data)
void setGlobalData (const char *label, const float &data)
 Add global data value (float)
 
void setGlobalData (const char *label, const double &data)
void setGlobalData (const char *label, const double &data)
 Add global data value (double)
 
void setGlobalData (const char *label, const helios::vec2 &data)
void setGlobalData (const char *label, const helios::vec2 &data)
 Add global data value (vec2)
 
void setGlobalData (const char *label, const helios::vec3 &data)
void setGlobalData (const char *label, const helios::vec3 &data)
 Add global data value (vec3)
 
void setGlobalData (const char *label, const helios::vec4 &data)
void setGlobalData (const char *label, const helios::vec4 &data)
 Add global data value (vec4)
 
void setGlobalData (const char *label, const helios::int2 &data)
void setGlobalData (const char *label, const helios::int2 &data)
 Add global data value (int2)
 
void setGlobalData (const char *label, const helios::int3 &data)
void setGlobalData (const char *label, const helios::int3 &data)
 Add global data value (int3)
 
void setGlobalData (const char *label, const helios::int4 &data)
void setGlobalData (const char *label, const helios::int4 &data)
 Add global data value (int4)
 
void setGlobalData (const char *label, const std::string &data)
void setGlobalData (const char *label, const std::string &data)
 Add global data value (string)
 
void setGlobalData (const char *label, HeliosDataType type, size_t size, void *data)
void setGlobalData (const char *label, HeliosDataType type, size_t size, void *data)
 Add global data value (any type)
 
void renameGlobalData (const char *old_label, const char *new_label)
void renameGlobalData (const char *old_label, const char *new_label)
 Rename global data.
 
void duplicateGlobalData (const char *old_label, const char *new_label)
void duplicateGlobalData (const char *old_label, const char *new_label)
 Make a copy of global data.
 
void clearGlobalData (const char *label)
void clearGlobalData (const char *label)
 Delete/clear global data.
 
void getGlobalData (const char *label, int &data) const
void getGlobalData (const char *label, int &data) const
 Get global data value (scalar integer)
 
void getGlobalData (const char *label, std::vector< int > &data) const
void getGlobalData (const char *label, std::vector< int > &data) const
 Get global data (array of integers)
 
void getGlobalData (const char *label, uint &data) const
void getGlobalData (const char *label, uint &data) const
 Get global data value (scalar uint)
 
void getGlobalData (const char *label, std::vector< uint > &data) const
void getGlobalData (const char *label, std::vector< uint > &data) const
 Get global data (array of uint's)
 
void getGlobalData (const char *label, float &data) const
void getGlobalData (const char *label, float &data) const
 Get global data value (scalar float)
 
void getGlobalData (const char *label, std::vector< float > &data) const
void getGlobalData (const char *label, std::vector< float > &data) const
 Get global data (array of floats)
 
void getGlobalData (const char *label, double &data) const
void getGlobalData (const char *label, double &data) const
 Get global data value (scalar double)
 
void getGlobalData (const char *label, std::vector< double > &data) const
void getGlobalData (const char *label, std::vector< double > &data) const
 Get global data (array of doubles)
 
void getGlobalData (const char *label, helios::vec2 &data) const
void getGlobalData (const char *label, helios::vec2 &data) const
 Get global data value (scalar vec2)
 
void getGlobalData (const char *label, std::vector< helios::vec2 > &data) const
void getGlobalData (const char *label, std::vector< helios::vec2 > &data) const
 Get global data (array of vec2's)
 
void getGlobalData (const char *label, helios::vec3 &data) const
void getGlobalData (const char *label, helios::vec3 &data) const
 Get global data value (scalar vec3)
 
void getGlobalData (const char *label, std::vector< helios::vec3 > &data) const
void getGlobalData (const char *label, std::vector< helios::vec3 > &data) const
 Get global data (array of vec3's)
 
void getGlobalData (const char *label, helios::vec4 &data) const
void getGlobalData (const char *label, helios::vec4 &data) const
 Get global data value (scalar vec4)
 
void getGlobalData (const char *label, std::vector< helios::vec4 > &data) const
void getGlobalData (const char *label, std::vector< helios::vec4 > &data) const
 Get global data (array of vec4's)
 
void getGlobalData (const char *label, helios::int2 &data) const
void getGlobalData (const char *label, helios::int2 &data) const
 Get global data value (scalar int2)
 
void getGlobalData (const char *label, std::vector< helios::int2 > &data) const
void getGlobalData (const char *label, std::vector< helios::int2 > &data) const
 Get global data (array of int2's)
 
void getGlobalData (const char *label, helios::int3 &data) const
void getGlobalData (const char *label, helios::int3 &data) const
 Get global data value (scalar int3)
 
void getGlobalData (const char *label, std::vector< helios::int3 > &data) const
void getGlobalData (const char *label, std::vector< helios::int3 > &data) const
 Get global data (array of int3's)
 
void getGlobalData (const char *label, helios::int4 &data) const
void getGlobalData (const char *label, helios::int4 &data) const
 Get global data value (scalar int4)
 
void getGlobalData (const char *label, std::vector< helios::int4 > &data) const
void getGlobalData (const char *label, std::vector< helios::int4 > &data) const
 Get global data (array of int4's)
 
void getGlobalData (const char *label, std::string &data) const
void getGlobalData (const char *label, std::string &data) const
 Get global data value (scalar string)
 
void getGlobalData (const char *label, std::vector< std::string > &data) const
void getGlobalData (const char *label, std::vector< std::string > &data) const
 Get global data (array of strings)
 
HeliosDataType getGlobalDataType (const char *label) const
HeliosDataType getGlobalDataType (const char *label) const
 Get the Helios data type of global data.
 
size_t getGlobalDataSize (const char *label) const
size_t getGlobalDataSize (const char *label) const
 Get the size/length of global data.
 
std::vector< std::string > listGlobalData () const
std::vector< std::string > listGlobalData () const
 List the labels for all global data in the Context.
 
bool doesGlobalDataExist (const char *label) const
bool doesGlobalDataExist (const char *label) const
 Check if global data 'label' exists.
 
void incrementGlobalData (const char *label, int increment)
void incrementGlobalData (const char *label, int increment)
 Increase value of global data (int) by some value.
 
void incrementGlobalData (const char *label, uint increment)
void incrementGlobalData (const char *label, uint increment)
 Increase value of global data (uint) by some value.
 
void incrementGlobalData (const char *label, float increment)
void incrementGlobalData (const char *label, float increment)
 Increase value of global data (float) by some value.
 
void incrementGlobalData (const char *label, double increment)
void incrementGlobalData (const char *label, double increment)
 Increase value of global data (double) by some value.
 
CompoundObject * getObjectPointer (uint ObjID) const
CompoundObject * getObjectPointer (uint ObjID) const
 Get a pointer to a Compound Object.
 
uint getObjectCount () const
uint getObjectCount () const
 Get the total number of objects that have been created in the Context.
 
bool doesObjectExist (uint ObjID) const
bool doesObjectExist (uint ObjID) const
 Check whether Compound Object exists in the Context.
 
std::vector< uint > getAllObjectIDs () const
std::vector< uint > getAllObjectIDs () const
 Get the IDs for all Compound Objects in the Context.
 
void deleteObject (uint ObjID)
void deleteObject (uint ObjID)
 Delete a single Compound Object from the context.
 
void deleteObject (const std::vector< uint > &ObjIDs)
void deleteObject (const std::vector< uint > &ObjIDs)
 Delete a group of Compound Objects from the context.
 
uint copyObject (uint ObjID)
uint copyObject (uint ObjID)
 Make a copy of a Compound Objects from the context.
 
std::vector< uint > copyObject (const std::vector< uint > &ObjIDs)
std::vector< uint > copyObject (const std::vector< uint > &ObjIDs)
 Make a copy of a group of Compound Objects from the context.
 
void copyObjectData (uint source_objID, uint destination_objID)
void copyObjectData (uint source_objID, uint destination_objID)
 copy all object data from one compound object to another
 
void duplicateObjectData (uint objID, const char *old_label, const char *new_label)
void duplicateObjectData (uint objID, const char *old_label, const char *new_label)
 Duplicate/copy existing object data.
 
void renameObjectData (uint objID, const char *old_label, const char *new_label)
void renameObjectData (uint objID, const char *old_label, const char *new_label)
 Rename existing object data.
 
std::vector< uint > filterObjectsByData (const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
std::vector< uint > filterObjectsByData (const std::vector< uint > &ObjIDs, const char *object_data, float threshold, const char *comparator) const
 Get a vector of object IDs that meet filtering criteria based on object data.
 
void translateObject (uint ObjID, const vec3 &shift)
void translateObject (uint ObjID, const vec3 &shift)
 Translate a single compound object.
 
void translateObject (const std::vector< uint > &ObjIDs, const vec3 &shift)
void translateObject (const std::vector< uint > &ObjIDs, const vec3 &shift)
 Translate multiple compound objects based on a vector of UUIDs.
 
void rotateObject (uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
void rotateObject (uint ObjID, float rotation_radians, const char *rotation_axis_xyz)
 Rotate a single compound object about the x, y, or z axis.
 
void rotateObject (const std::vector< uint > &ObjIDs, float rotation_radians, const char *rotation_axis_xyz)
void rotateObject (const std::vector< uint > &ObjIDs, float rotation_radians, const char *rotation_axis_xyz)
 Rotate multiple compound objects about the x, y, or z axis based on a vector of UUIDs.
 
void rotateObject (uint ObjID, float rotation_radians, const vec3 &rotation_axis_vector)
void rotateObject (uint ObjID, float rotation_radians, const vec3 &rotation_axis_vector)
 Rotate a single compound object about an arbitrary axis passing through the origin.
 
void rotateObject (const std::vector< uint > &ObjIDs, float rotation_radians, const vec3 &rotation_axis_vector)
void rotateObject (const std::vector< uint > &ObjIDs, float rotation_radians, const vec3 &rotation_axis_vector)
 Rotate multiple compound objects about an arbitrary axis passing through the origin based on a vector of UUIDs.
 
void rotateObject (uint ObjID, float rotation_radians, const vec3 &rotation_origin, const vec3 &rotation_axis_vector)
void rotateObject (uint ObjID, float rotation_radians, const vec3 &rotation_origin, const vec3 &rotation_axis_vector)
 Rotate a single compound object about an arbitrary line (not necessarily passing through the origin)
 
void rotateObject (const std::vector< uint > &ObjIDs, float rotation_radians, const vec3 &rotation_origin, const vec3 &rotation_axis_vector)
void rotateObject (const std::vector< uint > &ObjIDs, float rotation_radians, const vec3 &rotation_origin, const vec3 &rotation_axis_vector)
 Rotate multiple compound objects about an arbitrary line (not necessarily passing through the origin) based on a vector of UUIDs.
 
void scaleObject (uint ObjID, const helios::vec3 &scalefact)
void scaleObject (uint ObjID, const helios::vec3 &scalefact)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleObject (const std::vector< uint > &ObjIDs, const helios::vec3 &scalefact)
void scaleObject (const std::vector< uint > &ObjIDs, const helios::vec3 &scalefact)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleObjectAboutCenter (uint ObjID, const helios::vec3 &scalefact)
void scaleObjectAboutCenter (uint ObjID, const helios::vec3 &scalefact)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleObjectAboutCenter (const std::vector< uint > &ObjIDs, const helios::vec3 &scalefact)
void scaleObjectAboutCenter (const std::vector< uint > &ObjIDs, const helios::vec3 &scalefact)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleObjectAboutPoint (uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
void scaleObjectAboutPoint (uint ObjID, const helios::vec3 &scalefact, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleObjectAboutPoint (const std::vector< uint > &ObjIDs, const helios::vec3 &scalefact, const helios::vec3 &point)
void scaleObjectAboutPoint (const std::vector< uint > &ObjIDs, const helios::vec3 &scalefact, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
std::vector< uint > getObjectPrimitiveUUIDs (uint ObjID) const
std::vector< uint > getObjectPrimitiveUUIDs (uint ObjID) const
 Get primitive UUIDs associated with compound object (single object ID input)
 
std::vector< uint > getObjectPrimitiveUUIDs (const std::vector< uint > &ObjIDs) const
std::vector< uint > getObjectPrimitiveUUIDs (const std::vector< uint > &ObjIDs) const
 Get primitive UUIDs associated with compound objects (1D vector of object IDs input)
 
std::vector< uint > getObjectPrimitiveUUIDs (const std::vector< std::vector< uint > > &ObjIDs) const
std::vector< uint > getObjectPrimitiveUUIDs (const std::vector< std::vector< uint > > &ObjIDs) const
 Get primitive UUIDs associated with compound objects (2D vector of object IDs input)
 
helios::ObjectType getObjectType (uint ObjID) const
helios::ObjectType getObjectType (uint ObjID) const
 Get an enumeration specifying the type of the object.
 
Tile * getTileObjectPointer (uint ObjID) const
Tile * getTileObjectPointer (uint ObjID) const
 Get a pointer to a Tile Compound Object.
 
float getTileObjectAreaRatio (uint ObjectID) const
float getTileObjectAreaRatio (uint ObjectID) const
 Get the area ratio of a tile object (total object area / sub-patch area)
 
std::vector< float > getTileObjectAreaRatio (const std::vector< uint > &ObjectID) const
std::vector< float > getTileObjectAreaRatio (const std::vector< uint > &ObjectID) const
 Get the area ratio of a multiple tile objects (total object area / sub-patch area)
 
void setTileObjectSubdivisionCount (const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
void setTileObjectSubdivisionCount (const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
 Change the subdivision count of a tile object.
 
void setTileObjectSubdivisionCount (const std::vector< uint > &ObjectIDs, float area_ratio)
void setTileObjectSubdivisionCount (const std::vector< uint > &ObjectIDs, float area_ratio)
 change the subdivisions of a tile object
 
helios::vec3 getTileObjectCenter (uint ObjID) const
helios::vec3 getTileObjectCenter (uint ObjID) const
 Get the Cartesian (x,y,z) center position of a tile object.
 
helios::vec2 getTileObjectSize (uint ObjID) const
helios::vec2 getTileObjectSize (uint ObjID) const
 get the size of a tile object from the context
 
helios::int2 getTileObjectSubdivisionCount (uint ObjID) const
helios::int2 getTileObjectSubdivisionCount (uint ObjID) const
 get the subdivision count of a tile object from the context
 
helios::vec3 getTileObjectNormal (uint ObjID) const
helios::vec3 getTileObjectNormal (uint ObjID) const
 get the normal of a tile object from the context
 
std::vector< helios::vec2 > getTileObjectTextureUV (uint ObjID) const
std::vector< helios::vec2 > getTileObjectTextureUV (uint ObjID) const
 get the texture UV coordinates of a tile object from the context
 
std::vector< helios::vec3 > getTileObjectVertices (uint ObjID) const
std::vector< helios::vec3 > getTileObjectVertices (uint ObjID) const
 get the vertices of a tile object from the context
 
Sphere * getSphereObjectPointer (uint ObjID) const
Sphere * getSphereObjectPointer (uint ObjID) const
 Get a pointer to a Sphere Compound Object.
 
helios::vec3 getSphereObjectCenter (uint ObjID) const
helios::vec3 getSphereObjectCenter (uint ObjID) const
 get the center of a Sphere object from the context
 
helios::vec3 getSphereObjectRadius (uint ObjID) const
helios::vec3 getSphereObjectRadius (uint ObjID) const
 get the radius of a Sphere object from the context
 
uint getSphereObjectSubdivisionCount (uint ObjID) const
uint getSphereObjectSubdivisionCount (uint ObjID) const
 get the subdivision count of a Sphere object from the context
 
float getSphereObjectVolume (uint ObjID) const
float getSphereObjectVolume (uint ObjID) const
 get the volume of a Sphere object from the context
 
Tube * getTubeObjectPointer (uint ObjID) const
Tube * getTubeObjectPointer (uint ObjID) const
 Get a pointer to a Tube Compound Object.
 
uint getTubeObjectSubdivisionCount (uint ObjectID) const
uint getTubeObjectSubdivisionCount (uint ObjectID) const
 get the subdivision count of a Tube object from the context
 
std::vector< helios::vec3 > getTubeObjectNodes (uint ObjID) const
std::vector< helios::vec3 > getTubeObjectNodes (uint ObjID) const
 get the nodes of a Tube object from the context
 
std::vector< float > getTubeObjectNodeRadii (uint ObjID) const
std::vector< float > getTubeObjectNodeRadii (uint ObjID) const
 get the node radii of a Tube object from the context
 
std::vector< RGBcolor > getTubeObjectNodeColors (uint ObjID) const
std::vector< RGBcolor > getTubeObjectNodeColors (uint ObjID) const
 get the node colors of a Tube object from the context
 
float getTubeObjectVolume (uint ObjID) const
float getTubeObjectVolume (uint ObjID) const
 get the volume of a Tube object from the context
 
float getTubeObjectSegmentVolume (uint ObjID, uint segment_index) const
float getTubeObjectSegmentVolume (uint ObjID, uint segment_index) const
 get the volume of a segment within a Tube object
 
void appendTubeSegment (uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
void appendTubeSegment (uint ObjID, const helios::vec3 &node_position, float radius, const RGBcolor &color)
 Append a tube segment to an existing tube object.
 
void appendTubeSegment (uint ObjID, const helios::vec3 &node_position, float node_radius, const char *texturefile, const helios::vec2 &textureuv_ufrac)
void appendTubeSegment (uint ObjID, const helios::vec3 &node_position, float node_radius, const char *texturefile, const helios::vec2 &textureuv_ufrac)
 Append an additional segment to the existing tube object.
 
void scaleTubeGirth (uint ObjID, float scale_factor)
void scaleTubeGirth (uint ObjID, float scale_factor)
 Scale the girth for all nodes of a tube object.
 
void setTubeRadii (uint ObjID, const std::vector< float > &node_radii)
void setTubeRadii (uint ObjID, const std::vector< float > &node_radii)
 Set tube radii at each segment node.
 
void scaleTubeLength (uint ObjID, float scale_factor)
void scaleTubeLength (uint ObjID, float scale_factor)
 Scale the length of a tube object by an arbitrary factor for all tube nodes.
 
void setTubeNodes (uint ObjID, const std::vector< helios::vec3 > &node_xyz)
void setTubeNodes (uint ObjID, const std::vector< helios::vec3 > &node_xyz)
 Set tube vertex coordinates at each segment node.
 
Box * getBoxObjectPointer (uint ObjID) const
Box * getBoxObjectPointer (uint ObjID) const
 Get a pointer to a Box Compound Object.
 
helios::vec3 getBoxObjectCenter (uint ObjID) const
helios::vec3 getBoxObjectCenter (uint ObjID) const
 get the center of a Box object from the context
 
helios::vec3 getBoxObjectSize (uint ObjID) const
helios::vec3 getBoxObjectSize (uint ObjID) const
 get the size of a Box object from the context
 
helios::int3 getBoxObjectSubdivisionCount (uint ObjID) const
helios::int3 getBoxObjectSubdivisionCount (uint ObjID) const
 get the subdivision count of a Box object from the context
 
float getBoxObjectVolume (uint ObjID) const
float getBoxObjectVolume (uint ObjID) const
 get the volume of a Box object from the context
 
Disk * getDiskObjectPointer (uint ObjID) const
Disk * getDiskObjectPointer (uint ObjID) const
 Get a pointer to a Disk Compound Object.
 
helios::vec3 getDiskObjectCenter (uint ObjID) const
helios::vec3 getDiskObjectCenter (uint ObjID) const
 get the center of a Disk object from the context
 
helios::vec2 getDiskObjectSize (uint ObjID) const
helios::vec2 getDiskObjectSize (uint ObjID) const
 get the size of a Disk object from the context
 
uint getDiskObjectSubdivisionCount (uint ObjID) const
uint getDiskObjectSubdivisionCount (uint ObjID) const
 get the subdivision count of a Disk object from the context
 
Polymesh * getPolymeshObjectPointer (uint ObjID) const
Polymesh * getPolymeshObjectPointer (uint ObjID) const
 Get a pointer to a Polygon Mesh Compound Object.
 
float getPolymeshObjectVolume (uint ObjID) const
float getPolymeshObjectVolume (uint ObjID) const
 Get the volume of a Polygon Mesh object from the context.
 
Cone * getConeObjectPointer (uint ObjID) const
Cone * getConeObjectPointer (uint ObjID) const
 Get a pointer to a Cone Compound Object.
 
uint getConeObjectSubdivisionCount (uint ObjID) const
uint getConeObjectSubdivisionCount (uint ObjID) const
 get the subdivision count of a Cone object from the context
 
std::vector< helios::vec3 > getConeObjectNodes (uint ObjID) const
std::vector< helios::vec3 > getConeObjectNodes (uint ObjID) const
 get the nodes of a Cone object from the context
 
std::vector< float > getConeObjectNodeRadii (uint ObjID) const
std::vector< float > getConeObjectNodeRadii (uint ObjID) const
 get the node radii of a Cone object from the context
 
helios::vec3 getConeObjectNode (uint ObjID, int number) const
helios::vec3 getConeObjectNode (uint ObjID, int number) const
 get a node of a Cone object from the context
 
float getConeObjectNodeRadius (uint ObjID, int number) const
float getConeObjectNodeRadius (uint ObjID, int number) const
 get a node radius of a Cone object from the context
 
helios::vec3 getConeObjectAxisUnitVector (uint ObjID) const
helios::vec3 getConeObjectAxisUnitVector (uint ObjID) const
 get the axis unit vector of a Cone object from the context
 
float getConeObjectLength (uint ObjID) const
float getConeObjectLength (uint ObjID) const
 get the length of a Cone object from the context
 
float getConeObjectVolume (uint ObjID) const
float getConeObjectVolume (uint ObjID) const
 get the volume of a Cone object from the context
 
uint addTileObject (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
uint addTileObject (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
 Add a patch that is subdivided into a regular grid of sub-patches (tiled)
 
uint addTileObject (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const RGBcolor &color)
uint addTileObject (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const RGBcolor &color)
 Add a patch that is subdivided into a regular grid of sub-patches (tiled)
 
uint addTileObject (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const char *texturefile)
uint addTileObject (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const char *texturefile)
 Add a patch that is subdivided into a regular grid of sub-patches (tiled)
 
uint addSphereObject (uint Ndivs, const vec3 &center, float radius)
uint addSphereObject (uint Ndivs, const vec3 &center, float radius)
 Add a spherical compound object to the Context.
 
uint addSphereObject (uint Ndivs, const vec3 &center, float radius, const RGBcolor &color)
uint addSphereObject (uint Ndivs, const vec3 &center, float radius, const RGBcolor &color)
 Add a spherical compound object to the Context.
 
uint addSphereObject (uint Ndivs, const vec3 &center, float radius, const char *texturefile)
uint addSphereObject (uint Ndivs, const vec3 &center, float radius, const char *texturefile)
 Add a spherical compound object to the Context colored by texture map.
 
uint addSphereObject (uint Ndivs, const vec3 &center, const vec3 &radius)
uint addSphereObject (uint Ndivs, const vec3 &center, const vec3 &radius)
 Add a spherical/ellipsoidal compound object to the Context.
 
uint addSphereObject (uint Ndivs, const vec3 &center, const vec3 &radius, const RGBcolor &color)
uint addSphereObject (uint Ndivs, const vec3 &center, const vec3 &radius, const RGBcolor &color)
 Add a spherical/ellipsoidal compound object to the Context.
 
uint addSphereObject (uint Ndivs, const vec3 &center, const vec3 &radius, const char *texturefile)
uint addSphereObject (uint Ndivs, const vec3 &center, const vec3 &radius, const char *texturefile)
 Add a spherical/ellipsoidal compound object to the Context colored by texture map.
 
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
 Add a 3D tube compound object to the Context.
 
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const std::vector< RGBcolor > &color)
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const std::vector< RGBcolor > &color)
 Add a 3D tube compound object to the Context and specify its diffuse color.
 
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const char *texturefile)
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const char *texturefile)
 Add a 3D tube compound object to the Context that is texture-mapped. Texture is mapped to span the entire tube.
 
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const char *texturefile, const std::vector< float > &textureuv_vfrac)
uint addTubeObject (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const char *texturefile, const std::vector< float > &textureuv_vfrac)
 Add a 3D tube compound object to the Context that is texture-mapped.
 
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv)
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv)
 Add a rectangular prism tessellated with Patch primitives.
 
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color)
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color)
 Add a rectangular prism tessellated with Patch primitives.
 
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv, const char *texturefile)
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv, const char *texturefile)
 Add a rectangular prism tessellated with Patch primitives.
 
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color, bool reverse_normals)
uint addBoxObject (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color, bool reverse_normals)
 Add a rectangular prism tessellated with Patch primitives.
 
uint addBoxObject (vec3 center, const vec3 &size, const int3 &subdiv, const char *texturefile, bool reverse_normals)
uint addBoxObject (vec3 center, const vec3 &size, const int3 &subdiv, const char *texturefile, bool reverse_normals)
 Add a rectangular prism tessellated with Patch primitives.
 
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
 Add new Disk geometric primitive to the Context given its center, and size.
 
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation)
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation)
 Add new Disk Compound Object.
 
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
 Add new Disk Compound Object.
 
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
 Add new Disk Compound Object.
 
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file)
uint addDiskObject (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file)
 Add new Disk Compound Object.
 
uint addDiskObject (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
uint addDiskObject (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
 Add new Disk Compound Object.
 
uint addDiskObject (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
uint addDiskObject (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
 Add new Disk Compound Object.
 
uint addDiskObject (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texturefile)
uint addDiskObject (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texturefile)
 Add new Disk Compound Object.
 
uint addPolymeshObject (const std::vector< uint > &UUIDs)
uint addPolymeshObject (const std::vector< uint > &UUIDs)
 Add new Polymesh Compound Object.
 
uint addConeObject (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
uint addConeObject (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
 Add a 3D cone compound object to the Context.
 
uint addConeObject (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const RGBcolor &color)
uint addConeObject (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const RGBcolor &color)
 Add a 3D cone compound object to the Context and specify its diffuse color.
 
uint addConeObject (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const char *texturefile)
uint addConeObject (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const char *texturefile)
 Add a 3D cone compound object to the Context that is texture-mapped.
 
std::vector< uint > addSphere (uint Ndivs, const vec3 &center, float radius)
std::vector< uint > addSphere (uint Ndivs, const vec3 &center, float radius)
 Add a spherical compound object to the Context.
 
std::vector< uint > addSphere (uint Ndivs, const vec3 &center, float radius, const RGBcolor &color)
std::vector< uint > addSphere (uint Ndivs, const vec3 &center, float radius, const RGBcolor &color)
 Add a spherical compound object to the Context.
 
std::vector< uint > addSphere (uint Ndivs, const vec3 &center, float radius, const char *texturefile)
std::vector< uint > addSphere (uint Ndivs, const vec3 &center, float radius, const char *texturefile)
 Add a spherical compound object to the Context colored by texture map.
 
std::vector< uint > addTile (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
std::vector< uint > addTile (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
 Add a patch that is subdivided into a regular grid of sub-patches (tiled)
 
std::vector< uint > addTile (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const RGBcolor &color)
std::vector< uint > addTile (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const RGBcolor &color)
 Add a patch that is subdivided into a regular grid of sub-patches (tiled)
 
std::vector< uint > addTile (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const char *texturefile)
std::vector< uint > addTile (const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv, const char *texturefile)
 Add a patch that is subdivided into a regular grid of sub-patches (tiled)
 
std::vector< uint > addTube (uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
std::vector< uint > addTube (uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
 Add a 3D tube compound object to the Context.
 
std::vector< uint > addTube (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const std::vector< RGBcolor > &color)
std::vector< uint > addTube (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const std::vector< RGBcolor > &color)
 Add a 3D tube compound object to the Context and specify its diffuse color.
 
std::vector< uint > addTube (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const char *texturefile)
std::vector< uint > addTube (uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius, const char *texturefile)
 Add a 3D tube compound object to the Context that is texture-mapped.
 
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv)
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv)
 Add a rectangular prism tessellated with Patch primitives.
 
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color)
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color)
 Add a rectangular prism tessellated with Patch primitives.
 
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const char *texturefile)
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const char *texturefile)
 Add a rectangular prism tessellated with Patch primitives.
 
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color, bool reverse_normals)
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const RGBcolor &color, bool reverse_normals)
 Add a rectangular prism tessellated with Patch primitives.
 
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const char *texturefile, bool reverse_normals)
std::vector< uint > addBox (const vec3 &center, const vec3 &size, const int3 &subdiv, const char *texturefile, bool reverse_normals)
 Add a rectangular prism tessellated with Patch primitives.
 
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
 Add new Disk geometric primitive to the Context given its center, and size.
 
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation)
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation)
 Add new Disk geometric primitive.
 
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
 Add new Disk geometric primitive.
 
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
 Add new Disk geometric primitive.
 
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file)
std::vector< uint > addDisk (uint Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texture_file)
 Add new Disk geometric primitive.
 
std::vector< uint > addDisk (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
std::vector< uint > addDisk (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBcolor &color)
 Add new Disk geometric primitive.
 
std::vector< uint > addDisk (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
std::vector< uint > addDisk (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const helios::RGBAcolor &color)
 Add new Disk geometric primitive.
 
std::vector< uint > addDisk (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texturefile)
std::vector< uint > addDisk (const int2 &Ndivs, const helios::vec3 &center, const helios::vec2 &size, const helios::SphericalCoord &rotation, const char *texturefile)
 Add new Disk geometric primitive.
 
std::vector< uint > addCone (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
std::vector< uint > addCone (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
 Add a 3D cone to the Context.
 
std::vector< uint > addCone (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, RGBcolor &color)
std::vector< uint > addCone (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, RGBcolor &color)
 Add a 3D cone to the Context and specify its diffuse color.
 
std::vector< uint > addCone (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const char *texturefile)
std::vector< uint > addCone (uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1, const char *texturefile)
 Add a 3D cone to the Context that is texture-mapped.
 
void addTimeseriesData (const char *label, float value, const Date &date, const Time &time)
void addTimeseriesData (const char *label, float value, const Date &date, const Time &time)
 Add a data point to timeseries of data.
 
void setCurrentTimeseriesPoint (const char *label, uint index)
void setCurrentTimeseriesPoint (const char *label, uint index)
 Set the Context date and time by providing the index of a timeseries data point.
 
float queryTimeseriesData (const char *label, const Date &date, const Time &time) const
float queryTimeseriesData (const char *label, const Date &date, const Time &time) const
 Get a timeseries data point by specifying a date and time vector.
 
float queryTimeseriesData (const char *label) const
float queryTimeseriesData (const char *label) const
 Get a timeseries data point at the time currently set in the Context.
 
float queryTimeseriesData (const char *label, uint index) const
float queryTimeseriesData (const char *label, uint index) const
 Get a timeseries data point by index in the timeseries.
 
Time queryTimeseriesTime (const char *label, uint index) const
Time queryTimeseriesTime (const char *label, uint index) const
 Get the time associated with a timeseries data point.
 
Date queryTimeseriesDate (const char *label, uint index) const
Date queryTimeseriesDate (const char *label, uint index) const
 Get the date associated with a timeseries data point.
 
uint getTimeseriesLength (const char *label) const
uint getTimeseriesLength (const char *label) const
 Get the length of timeseries data.
 
bool doesTimeseriesVariableExist (const char *label) const
bool doesTimeseriesVariableExist (const char *label) const
 Query whether a timeseries variable exists.
 
std::vector< std::string > listTimeseriesVariables () const
std::vector< std::string > listTimeseriesVariables () const
 List all existing timeseries variables.
 
void loadTabularTimeseriesData (const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
void loadTabularTimeseriesData (const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
 Load tabular weather data from text file into timeseries.
 
void getDomainBoundingBox (helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
void getDomainBoundingBox (helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
 Get a box that bounds all primitives in the domain.
 
void getDomainBoundingBox (const std::vector< uint > &UUIDs, helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
void getDomainBoundingBox (const std::vector< uint > &UUIDs, helios::vec2 &xbounds, helios::vec2 &ybounds, helios::vec2 &zbounds) const
 Get a box that bounds a subset of primitives.
 
void getDomainBoundingSphere (helios::vec3 &center, float &radius) const
void getDomainBoundingSphere (helios::vec3 &center, float &radius) const
 Get the center and radius of a sphere that bounds all primitives in the domain.
 
void getDomainBoundingSphere (const std::vector< uint > &UUIDs, helios::vec3 &center, float &radius) const
void getDomainBoundingSphere (const std::vector< uint > &UUIDs, helios::vec3 &center, float &radius) const
 Get the center and radius of a sphere that bounds a subset of primitives.
 
void cropDomainX (const vec2 &xbounds)
void cropDomainX (const vec2 &xbounds)
 Crop the domain in the x-direction such that all primitives lie within some specified x interval.
 
void cropDomainY (const vec2 &ybounds)
void cropDomainY (const vec2 &ybounds)
 Crop the domain in the y-direction such that all primitives lie within some specified y interval.
 
void cropDomainZ (const vec2 &zbounds)
void cropDomainZ (const vec2 &zbounds)
 Crop the domain in the z-direction such that all primitives lie within some specified z interval.
 
void cropDomain (std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
void cropDomain (std::vector< uint > &UUIDs, const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
 Crop specified UUIDs such that they lie within some specified axis-aligned box.
 
void cropDomain (const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
void cropDomain (const vec2 &xbounds, const vec2 &ybounds, const vec2 &zbounds)
 Crop the domain such that all primitives lie within some specified axis-aligned box.
 
void colorPrimitiveByDataPseudocolor (const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors)
void colorPrimitiveByDataPseudocolor (const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors)
 Overwrite primitive color based on a pseudocolor mapping of primitive data values.
 
void colorPrimitiveByDataPseudocolor (const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors, float data_min, float data_max)
void colorPrimitiveByDataPseudocolor (const std::vector< uint > &UUIDs, const std::string &primitive_data, const std::string &colormap, uint Ncolors, float data_min, float data_max)
 Overwrite primitive color based on a pseudocolor mapping of primitive data values. Clamp to specified data range.
 
std::vector< uint > loadXML (const char *filename, bool quiet=false)
std::vector< uint > loadXML (const char *filename, bool quiet=false)
 Load inputs specified in an XML file.
 
std::vector< std::string > getLoadedXMLFiles ()
std::vector< std::string > getLoadedXMLFiles ()
 Get names of XML files that are currently loaded.
 
void writeXML (const char *filename, bool quiet=false) const
void writeXML (const char *filename, bool quiet=false) const
 Write Context geometry and data to XML file for all UUIDs in the context.
 
void writeXML (const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
void writeXML (const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
 Write Context geometry and data to XML file for a subset of UUIDs in the context.
 
void writeXML_byobject (const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
void writeXML_byobject (const char *filename, const std::vector< uint > &UUIDs, bool quiet=false) const
 Write Context geometry and data to XML file for a subset of compound object IDs in the context.
 
void writePrimitiveData (std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
void writePrimitiveData (std::string filename, const std::vector< std::string > &column_format, bool print_header=false) const
 Write primitive data to an ASCII text file for all primitives in the Context.
 
void writePrimitiveData (std::string filename, const std::vector< std::string > &column_format, const std::vector< uint > &UUIDs, bool print_header=false) const
void writePrimitiveData (std::string filename, const std::vector< std::string > &column_format, const std::vector< uint > &UUIDs, bool print_header=false) const
 Write primitive data to an ASCII text file for selected primitives in the Context.
 
std::vector< uint > loadPLY (const char *filename, bool silent=false)
std::vector< uint > loadPLY (const char *filename, bool silent=false)
 Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no scaling or rotation applied.
 
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const std::string &upaxis="YUP", bool silent=false)
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const std::string &upaxis="YUP", bool silent=false)
 Load geometry contained in a Stanford polygon file (.ply)
 
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const std::string &upaxis="YUP", bool silent=false)
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const std::string &upaxis="YUP", bool silent=false)
 Load geometry contained in a Stanford polygon file (.ply)
 
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const RGBcolor &default_color, const std::string &upaxis="YUP", bool silent=false)
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const RGBcolor &default_color, const std::string &upaxis="YUP", bool silent=false)
 Load geometry contained in a Stanford polygon file (.ply)
 
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, const std::string &upaxis="YUP", bool silent=false)
std::vector< uint > loadPLY (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, const std::string &upaxis="YUP", bool silent=false)
 Load geometry contained in a Stanford polygon file (.ply)
 
void writePLY (const char *filename) const
void writePLY (const char *filename) const
 Write geometry in the Context to a Stanford polygon file (.ply)
 
std::vector< uint > loadOBJ (const char *filename, bool silent=false)
std::vector< uint > loadOBJ (const char *filename, bool silent=false)
 Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without any scaling or rotation applied.
 
std::vector< uint > loadOBJ (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, bool silent=false)
std::vector< uint > loadOBJ (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, bool silent=false)
 Load geometry contained in a Wavefront OBJ file (.obj)
 
std::vector< uint > loadOBJ (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, const char *upaxis, bool silent=false)
std::vector< uint > loadOBJ (const char *filename, const vec3 &origin, float height, const SphericalCoord &rotation, const RGBcolor &default_color, const char *upaxis, bool silent=false)
 Load geometry contained in a Wavefront OBJ file (.obj)
 
std::vector< uint > loadOBJ (const char *filename, const vec3 &origin, const helios::vec3 &scale, const SphericalCoord &rotation, const RGBcolor &default_color, const char *upaxis, bool silent=false)
std::vector< uint > loadOBJ (const char *filename, const vec3 &origin, const helios::vec3 &scale, const SphericalCoord &rotation, const RGBcolor &default_color, const char *upaxis, bool silent=false)
 Load geometry contained in a Wavefront OBJ file (.obj)
 
void writeOBJ (const std::string &filename) const
void writeOBJ (const std::string &filename) const
 Write geometry in the Context to a Wavefront file (.obj)
 
void writeOBJ (const std::string &filename, const std::vector< uint > &UUIDs) const
void writeOBJ (const std::string &filename, const std::vector< uint > &UUIDs) const
 Write geometry in the Context to a Wavefront file (.obj) for a subset of UUIDs.
 
void writeOBJ (const std::string &filename, const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_dat_fields) const
void writeOBJ (const std::string &filename, const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_dat_fields) const
 Write geometry in the Context to a Wavefront file (.obj)
 
void setDate (int day, int month, int year)
void setDate (int day, int month, int year)
 Set simulation date by day, month, year.
 
void setDate (const Date &date)
void setDate (const Date &date)
 Set simulation date by Date vector.
 
void setDate (int Julian_day, int year)
void setDate (int Julian_day, int year)
 Set simulation date by Julian day.
 
helios::Date getDate () const
helios::Date getDate () const
 Get simulation date.
 
const char * getMonthString () const
const char * getMonthString () const
 Get a string corresponding to the month of the simulation date.
 
int getJulianDate () const
int getJulianDate () const
 Get simulation date by Julian day.
 
void setTime (int minute, int hour)
void setTime (int minute, int hour)
 Set simulation time.
 
void setTime (int second, int minute, int hour)
void setTime (int second, int minute, int hour)
 Set simulation time.
 
void setTime (const Time &time)
void setTime (const Time &time)
 Set simulation time using Time vector.
 
helios::Time getTime () const
helios::Time getTime () const
 Get the simulation time.
 
void setLocation (const helios::Location &location)
void setLocation (const helios::Location &location)
 Set the location of the simulation (latitude, longitude, and UTC offset)
 
helios::Location getLocation () const
helios::Location getLocation () const
 Get the location of the simulation (latitude, longitude, and UTC offset)
 
float randu ()
float randu ()
 Draw a random number from a uniform distribution between 0 and 1.
 
float randu (float min, float max)
float randu (float min, float max)
 Draw a random number from a uniform distribution with specified range.
 
int randu (int min, int max)
int randu (int min, int max)
 Draw a random number from a uniform distribution with specified range.
 
float randn ()
float randn ()
 Draw a random number from a normal distribution with mean = 0, stddev = 1.
 
float randn (float mean, float stddev)
float randn (float mean, float stddev)
 Draw a random number from a normal distribution with specified mean and standard deviation.
 
void duplicatePrimitiveData (const char *existing_data_label, const char *copy_data_label)
void duplicatePrimitiveData (const char *existing_data_label, const char *copy_data_label)
 Duplicate primitive data to create a copy of the primitive data with a new name/label.
 
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
 Calculate mean of primitive data values (float) for a subset of primitives.
 
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, double &mean) const
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, double &mean) const
 Calculate mean of primitive data values (double) for a subset of primitives.
 
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &mean) const
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &mean) const
 Calculate mean of primitive data values (vec2) for a subset of primitives.
 
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &mean) const
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &mean) const
 Calculate mean of primitive data values (vec3) for a subset of primitives.
 
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &mean) const
void calculatePrimitiveDataMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &mean) const
 Calculate mean of primitive data values (vec4) for a subset of primitives.
 
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
 Calculate mean of primitive data values (float) for a subset of primitives, where each value in the mean calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, double &awt_mean) const
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, double &awt_mean) const
 Calculate mean of primitive data values (double) for a subset of primitives, where each value in the mean calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &awt_mean) const
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &awt_mean) const
 Calculate mean of primitive data values (vec2) for a subset of primitives, where each value in the mean calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &awt_mean) const
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &awt_mean) const
 Calculate mean of primitive data values (vec2) for a subset of primitives, where each value in the mean calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &awt_mean) const
void calculatePrimitiveDataAreaWeightedMean (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &awt_mean) const
 Calculate mean of primitive data values (vec2) for a subset of primitives, where each value in the mean calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
 Calculate sum of primitive data values (float) for a subset of primitives.
 
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, double &sum) const
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, double &sum) const
 Calculate sum of primitive data values (double) for a subset of primitives.
 
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &sum) const
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &sum) const
 Calculate sum of primitive data values (vec2) for a subset of primitives.
 
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &sum) const
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &sum) const
 Calculate sum of primitive data values (vec3) for a subset of primitives.
 
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &sum) const
void calculatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &sum) const
 Calculate sum of primitive data values (vec4) for a subset of primitives.
 
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, float &awt_sum) const
 Calculate sum of primitive data values (float) for a subset of primitives, where each value in the sum calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, double &sum) const
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, double &sum) const
 Calculate sum of primitive data values (double) for a subset of primitives, where each value in the sum calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &sum) const
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec2 &sum) const
 Calculate sum of primitive data values (vec2) for a subset of primitives, where each value in the sum calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &sum) const
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec3 &sum) const
 Calculate sum of primitive data values (vec3) for a subset of primitives, where each value in the sum calculation is weighted by the primitive's one-sided surface area.
 
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &sum) const
void calculatePrimitiveDataAreaWeightedSum (const std::vector< uint > &UUIDs, const std::string &label, helios::vec4 &sum) const
 Calculate sum of primitive data values (vec4) for a subset of primitives, where each value in the sum calculation is weighted by the primitive's one-sided surface area.
 
void scalePrimitiveData (const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
void scalePrimitiveData (const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
 Multiply primitive data values by a constant scaling factor for a subset of primitives.
 
void scalePrimitiveData (const std::string &label, float scaling_factor)
void scalePrimitiveData (const std::string &label, float scaling_factor)
 Multiply primitive data values by a constant scaling factor for all primitives.
 
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, int increment)
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, int increment)
 Increase value of primitive data (int) by some value.
 
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, uint increment)
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, uint increment)
 Increase value of primitive data (uint) by some value.
 
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, float increment)
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, float increment)
 Increase value of primitive data (float) by some value.
 
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, double increment)
void incrementPrimitiveData (const std::vector< uint > &UUIDs, const char *label, double increment)
 Increase value of primitive data (double) by some value.
 
void aggregatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
void aggregatePrimitiveDataSum (const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
 Sum multiple primitive data values for each primitive together and store result in new primitive data.
 
void aggregatePrimitiveDataProduct (const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
void aggregatePrimitiveDataProduct (const std::vector< uint > &UUIDs, const std::vector< std::string > &primitive_data_labels, const std::string &result_primitive_data_label)
 Multiply primitive data values for each primitive together and store result in new primitive data.
 
float sumPrimitiveSurfaceArea (const std::vector< uint > &UUIDs) const
float sumPrimitiveSurfaceArea (const std::vector< uint > &UUIDs) const
 Sum the one-sided surface area of a group of primitives.
 
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
 Filter a set of primitives based on their primitive data and a condition and float value.
 
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, double filter_value, const std::string &comparator)
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, double filter_value, const std::string &comparator)
 Filter a set of primitives based on their primitive data and a condition and double value.
 
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, int filter_value, const std::string &comparator)
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, int filter_value, const std::string &comparator)
 Filter a set of primitives based on their primitive data and a condition and int value.
 
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, uint filter_value, const std::string &comparator)
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, uint filter_value, const std::string &comparator)
 Filter a set of primitives based on their primitive data and a condition and uint value.
 
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, const std::string &filter_value)
std::vector< uint > filterPrimitivesByData (const std::vector< uint > &UUIDs, const std::string &primitive_data_label, const std::string &filter_value)
 Get set of primitives whose primitive data matches a given string.
 
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, float filter_value, const std::string &comparator)
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, float filter_value, const std::string &comparator)
 Filter a set of compound objects based on their object data and a condition and float value.
 
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, double filter_value, const std::string &comparator)
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, double filter_value, const std::string &comparator)
 Filter a set of compound objects based on their object data and a condition and double value.
 
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, int filter_value, const std::string &comparator)
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, int filter_value, const std::string &comparator)
 Filter a set of compound objects based on their object data and a condition and int value.
 
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, uint filter_value, const std::string &comparator)
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, uint filter_value, const std::string &comparator)
 Filter a set of compound objects based on their object data and a condition and uint value.
 
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, const std::string &filter_value)
std::vector< uint > filterObjectsByData (const std::vector< uint > &objIDs, const std::string &object_data_label, const std::string &filter_value)
 Get set of compound objects whose object data matches a given string.
 
- + - +

Static Public Member Functions

static int selfTest ()
static int selfTest ()
 Run a self-test of the Context. The Context self-test runs through validation checks of Context-related methods to ensure they are working properly.
 
static bool scanXMLForTag (const std::string &filename, const std::string &tag, const std::string &label="")
static bool scanXMLForTag (const std::string &filename, const std::string &tag, const std::string &label="")
 Scan a Helios XML file to check if a tag exists.
 
@@ -1758,7 +1769,7 @@

Context::Context ( - ) + ) @@ -1779,7 +1790,7 @@

Context::~Context ( - ) + ) @@ -1801,31 +1812,22 @@

uint Context::addPatch ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBAcolor &  - color  - - - - ) - + const helios::RGBAcolor & color )

@@ -1855,31 +1857,22 @@

uint Context::addPatch ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::SphericalCoord &  - rotation, + const helios::SphericalCoord & rotation, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -1909,31 +1902,22 @@

uint Context::addVoxel ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - const float &  - rotation, + const float & rotation, - const helios::RGBAcolor &  - color  - - - - ) - + const helios::RGBAcolor & color )

@@ -1963,31 +1947,22 @@

uint Context::addVoxel ( - const helios::vec3 &  - center, + const helios::vec3 & center, - const helios::vec3 &  - size, + const helios::vec3 & size, - const float &  - rotation, + const float & rotation, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -2017,25 +1992,17 @@

void Context::aggregatePrimitiveDataProduct ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::vector< std::string > &  - primitive_data_labels, + const std::vector< std::string > & primitive_data_labels, - const std::string &  - result_primitive_data_label  - - - - ) - + const std::string & result_primitive_data_label )

@@ -2064,25 +2031,17 @@

void Context::aggregatePrimitiveDataSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::vector< std::string > &  - primitive_data_labels, + const std::vector< std::string > & primitive_data_labels, - const std::string &  - result_primitive_data_label  - - - - ) - + const std::string & result_primitive_data_label )

@@ -2111,37 +2070,27 @@

void Context::appendTubeSegment ( - uint  - ObjID, + uint ObjID, - const helios::vec3 &  - node_position, + const helios::vec3 & node_position, - float  - node_radius, + float node_radius, - const char *  - texturefile, + const char * texturefile, - const helios::vec2 &  - textureuv_ufrac  - - - - ) - + const helios::vec2 & textureuv_ufrac )

@@ -2171,31 +2120,22 @@

void Context::appendTubeSegment ( - uint  - ObjID, + uint ObjID, - const helios::vec3 &  - node_position, + const helios::vec3 & node_position, - float  - radius, + float radius, - const RGBcolor &  - color  - - - - ) - + const RGBcolor & color )

@@ -2224,8 +2164,7 @@

bool Context::areObjectPrimitivesComplete ( - uint  - objID) + uint objID) const @@ -2256,25 +2195,17 @@

void Context::calculatePrimitiveDataAreaWeightedMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - double &  - awt_mean  - - - - ) - const + double & awt_mean ) const

@@ -2302,25 +2233,17 @@

void Context::calculatePrimitiveDataAreaWeightedMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - float &  - awt_mean  - - - - ) - const + float & awt_mean ) const

@@ -2348,25 +2271,17 @@

void Context::calculatePrimitiveDataAreaWeightedMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec2 &  - awt_mean  - - - - ) - const + helios::vec2 & awt_mean ) const

@@ -2394,25 +2309,17 @@

void Context::calculatePrimitiveDataAreaWeightedMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec3 &  - awt_mean  - - - - ) - const + helios::vec3 & awt_mean ) const

@@ -2440,25 +2347,17 @@

void Context::calculatePrimitiveDataAreaWeightedMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec4 &  - awt_mean  - - - - ) - const + helios::vec4 & awt_mean ) const

@@ -2486,25 +2385,17 @@

void Context::calculatePrimitiveDataAreaWeightedSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - double &  - sum  - - - - ) - const + double & sum ) const

@@ -2532,25 +2423,17 @@

void Context::calculatePrimitiveDataAreaWeightedSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - float &  - awt_sum  - - - - ) - const + float & awt_sum ) const

@@ -2578,25 +2461,17 @@

void Context::calculatePrimitiveDataAreaWeightedSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec2 &  - sum  - - - - ) - const + helios::vec2 & sum ) const

@@ -2624,25 +2499,17 @@

void Context::calculatePrimitiveDataAreaWeightedSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec3 &  - sum  - - - - ) - const + helios::vec3 & sum ) const

@@ -2670,25 +2537,17 @@

void Context::calculatePrimitiveDataAreaWeightedSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec4 &  - sum  - - - - ) - const + helios::vec4 & sum ) const

@@ -2716,25 +2575,17 @@

void Context::calculatePrimitiveDataMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - double &  - mean  - - - - ) - const + double & mean ) const

@@ -2762,25 +2613,17 @@

void Context::calculatePrimitiveDataMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - float &  - mean  - - - - ) - const + float & mean ) const

@@ -2808,25 +2651,17 @@

void Context::calculatePrimitiveDataMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec2 &  - mean  - - - - ) - const + helios::vec2 & mean ) const

@@ -2854,25 +2689,17 @@

void Context::calculatePrimitiveDataMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec3 &  - mean  - - - - ) - const + helios::vec3 & mean ) const

@@ -2900,25 +2727,17 @@

void Context::calculatePrimitiveDataMean ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec4 &  - mean  - - - - ) - const + helios::vec4 & mean ) const

@@ -2946,25 +2765,17 @@

void Context::calculatePrimitiveDataSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - double &  - sum  - - - - ) - const + double & sum ) const

@@ -2992,25 +2803,17 @@

void Context::calculatePrimitiveDataSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - float &  - sum  - - - - ) - const + float & sum ) const

@@ -3038,25 +2841,17 @@

void Context::calculatePrimitiveDataSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec2 &  - sum  - - - - ) - const + helios::vec2 & sum ) const

@@ -3084,25 +2879,17 @@

void Context::calculatePrimitiveDataSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec3 &  - sum  - - - - ) - const + helios::vec3 & sum ) const

@@ -3130,25 +2917,17 @@

void Context::calculatePrimitiveDataSum ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - helios::vec4 &  - sum  - - - - ) - const + helios::vec4 & sum ) const

@@ -3176,8 +2955,7 @@

void Context::cleanDeletedObjectIDs ( - std::vector< std::vector< std::vector< uint > > > &  - objIDs) + std::vector< std::vector< std::vector< uint > > > & objIDs) const @@ -3204,8 +2982,7 @@

void Context::cleanDeletedObjectIDs ( - std::vector< std::vector< uint > > &  - objIDs) + std::vector< std::vector< uint > > & objIDs) const @@ -3232,8 +3009,7 @@

void Context::cleanDeletedObjectIDs ( - std::vector< uint > &  - objIDs) + std::vector< uint > & objIDs) const @@ -3260,8 +3036,7 @@

void Context::cleanDeletedUUIDs ( - std::vector< std::vector< std::vector< uint > > > &  - UUIDs) + std::vector< std::vector< std::vector< uint > > > & UUIDs) const @@ -3288,8 +3063,7 @@

void Context::cleanDeletedUUIDs ( - std::vector< std::vector< uint > > &  - UUIDs) + std::vector< std::vector< uint > > & UUIDs) const @@ -3316,8 +3090,7 @@

void Context::cleanDeletedUUIDs ( - std::vector< uint > &  - UUIDs) + std::vector< uint > & UUIDs) const @@ -3344,8 +3117,7 @@

void Context::clearGlobalData ( - const char *  - label) + const char * label) @@ -3372,19 +3144,12 @@

void Context::clearObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label  - - - - ) - + const char * label )

@@ -3411,19 +3176,12 @@

void Context::clearObjectData ( - uint  - objID, + uint objID, - const char *  - label  - - - - ) - + const char * label )

@@ -3450,19 +3208,12 @@

void Context::clearPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label  - - - - ) - + const char * label )

@@ -3489,19 +3240,12 @@

void Context::clearPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label  - - - - ) - + const char * label )

@@ -3528,31 +3272,22 @@

void Context::colorPrimitiveByDataPseudocolor ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data, + const std::string & primitive_data, - const std::string &  - colormap, + const std::string & colormap, - uint  - Ncolors  - - - - ) - + uint Ncolors )

@@ -3581,43 +3316,32 @@

void Context::colorPrimitiveByDataPseudocolor ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data, + const std::string & primitive_data, - const std::string &  - colormap, + const std::string & colormap, - uint  - Ncolors, + uint Ncolors, - float  - data_min, + float data_min, - float  - data_max  - - - - ) - + float data_max )

@@ -3648,8 +3372,7 @@

std::vector< uint > Context::copyObject ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs) @@ -3677,8 +3400,7 @@

uint Context::copyObject ( - uint  - ObjID) + uint ObjID) @@ -3706,19 +3428,12 @@

void Context::copyObjectData ( - uint  - source_objID, + uint source_objID, - uint  - destination_objID  - - - - ) - + uint destination_objID )

@@ -3745,8 +3460,7 @@

std::vector< uint > Context::copyPrimitive ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -3774,8 +3488,7 @@

uint Context::copyPrimitive ( - uint  - UUID) + uint UUID) @@ -3803,19 +3516,12 @@

void Context::copyPrimitiveData ( - uint  - sourceUUID, + uint sourceUUID, - uint  - destinationUUID  - - - - ) - + uint destinationUUID )

@@ -3842,25 +3548,17 @@

void Context::cropDomain ( - const vec2 &  - xbounds, + const vec2 & xbounds, - const vec2 &  - ybounds, + const vec2 & ybounds, - const vec2 &  - zbounds  - - - - ) - + const vec2 & zbounds )

@@ -3888,31 +3586,22 @@

void Context::cropDomain ( - std::vector< uint > &  - UUIDs, + std::vector< uint > & UUIDs, - const vec2 &  - xbounds, + const vec2 & xbounds, - const vec2 &  - ybounds, + const vec2 & ybounds, - const vec2 &  - zbounds  - - - - ) - + const vec2 & zbounds )

@@ -3941,8 +3630,7 @@

void Context::cropDomainX ( - const vec2 &  - xbounds) + const vec2 & xbounds) @@ -3969,8 +3657,7 @@

void Context::cropDomainY ( - const vec2 &  - ybounds) + const vec2 & ybounds) @@ -3997,8 +3684,7 @@

void Context::cropDomainZ ( - const vec2 &  - zbounds) + const vec2 & zbounds) @@ -4025,8 +3711,7 @@

void Context::deleteObject ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs) @@ -4053,8 +3738,7 @@

void Context::deleteObject ( - uint  - ObjID) + uint ObjID) @@ -4081,8 +3765,7 @@

void Context::deletePrimitive ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -4109,8 +3792,7 @@

void Context::deletePrimitive ( - uint  - UUID) + uint UUID) @@ -4137,8 +3819,7 @@

bool Context::doesGlobalDataExist ( - const char *  - label) + const char * label) const @@ -4166,19 +3847,12 @@

bool Context::doesObjectContainPrimitive ( - uint  - ObjID, + uint ObjID, - uint  - UUID  - - - - ) - + uint UUID )

@@ -4205,19 +3879,12 @@

bool Context::doesObjectDataExist ( - uint  - objID, + uint objID, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -4245,8 +3912,7 @@

bool Context::doesObjectExist ( - uint  - ObjID) + uint ObjID) const @@ -4273,19 +3939,12 @@

bool Context::doesPrimitiveDataExist ( - uint  - UUID, + uint UUID, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -4313,8 +3972,7 @@

bool Context::doesPrimitiveExist ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) const @@ -4342,8 +4000,7 @@

bool Context::doesPrimitiveExist ( - uint  - UUID) + uint UUID) const @@ -4370,19 +4027,12 @@

void Context::duplicateGlobalData ( - const char *  - old_label, + const char * old_label, - const char *  - new_label  - - - - ) - + const char * new_label )

@@ -4409,25 +4059,17 @@

void Context::duplicateObjectData ( - uint  - objID, + uint objID, - const char *  - old_label, + const char * old_label, - const char *  - new_label  - - - - ) - + const char * new_label )

@@ -4454,19 +4096,12 @@

void Context::duplicatePrimitiveData ( - const char *  - existing_data_label, + const char * existing_data_label, - const char *  - copy_data_label  - - - - ) - + const char * copy_data_label )

@@ -4493,25 +4128,17 @@

void Context::duplicatePrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - old_label, + const char * old_label, - const char *  - new_label  - - - - ) - + const char * new_label )

@@ -4539,31 +4166,22 @@

std::vector< uint > Context::filterObjectsByData ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const char *  - object_data, + const char * object_data, - float  - threshold, + float threshold, - const char *  - comparator  - - - - ) - const + const char * comparator ) const

@@ -4592,25 +4210,17 @@

std::vector< uint > Context::filterObjectsByData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const std::string &  - object_data_label, + const std::string & object_data_label, - const std::string &  - filter_value  - - - - ) - + const std::string & filter_value )

@@ -4640,31 +4250,22 @@

std::vector< uint > Context::filterObjectsByData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const std::string &  - object_data_label, + const std::string & object_data_label, - double  - filter_value, + double filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -4695,31 +4296,22 @@

std::vector< uint > Context::filterObjectsByData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const std::string &  - object_data_label, + const std::string & object_data_label, - float  - filter_value, + float filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -4750,31 +4342,22 @@

std::vector< uint > Context::filterObjectsByData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const std::string &  - object_data_label, + const std::string & object_data_label, - int  - filter_value, + int filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -4805,31 +4388,22 @@

std::vector< uint > Context::filterObjectsByData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const std::string &  - object_data_label, + const std::string & object_data_label, - uint  - filter_value, + uint filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -4860,25 +4434,17 @@

std::vector< uint > Context::filterPrimitivesByData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - const std::string &  - filter_value  - - - - ) - + const std::string & filter_value )

@@ -4908,31 +4474,22 @@

std::vector< uint > Context::filterPrimitivesByData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - double  - filter_value, + double filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -4963,31 +4520,22 @@

std::vector< uint > Context::filterPrimitivesByData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - float  - filter_value, + float filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -5018,31 +4566,22 @@

std::vector< uint > Context::filterPrimitivesByData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - int  - filter_value, + int filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -5073,31 +4612,22 @@

std::vector< uint > Context::filterPrimitivesByData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - primitive_data_label, + const std::string & primitive_data_label, - uint  - filter_value, + uint filter_value, - const std::string &  - comparator  - - - - ) - + const std::string & comparator )

@@ -5128,7 +4658,7 @@

std::vector< uint > Context::getAllObjectIDs ( - ) + ) const @@ -5150,7 +4680,7 @@

std::vector< uint > Context::getAllUUIDs ( - ) + ) const @@ -5171,8 +4701,7 @@

helios::vec3 Context::getBoxObjectCenter ( - uint  - ObjID) + uint ObjID) const @@ -5199,8 +4728,7 @@

Box * Context::getBoxObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -5227,8 +4755,7 @@

helios::vec3 Context::getBoxObjectSize ( - uint  - ObjID) + uint ObjID) const @@ -5255,8 +4782,7 @@

helios::int3 Context::getBoxObjectSubdivisionCount ( - uint  - ObjID) + uint ObjID) const @@ -5283,8 +4809,7 @@

float Context::getBoxObjectVolume ( - uint  - ObjID) + uint ObjID) const @@ -5311,8 +4836,7 @@

helios::vec3 Context::getConeObjectAxisUnitVector ( - uint  - ObjID) + uint ObjID) const @@ -5339,8 +4863,7 @@

float Context::getConeObjectLength ( - uint  - ObjID) + uint ObjID) const @@ -5368,19 +4891,12 @@

helios::vec3 Context::getConeObjectNode ( - uint  - ObjID, + uint ObjID, - int  - number  - - - - ) - const + int number ) const

@@ -5406,8 +4922,7 @@

std::vector< float > Context::getConeObjectNodeRadii ( - uint  - ObjID) + uint ObjID) const @@ -5434,19 +4949,12 @@

float Context::getConeObjectNodeRadius ( - uint  - ObjID, + uint ObjID, - int  - number  - - - - ) - const + int number ) const

@@ -5472,8 +4980,7 @@

std::vector< helios::vec3 > Context::getConeObjectNodes ( - uint  - ObjID) + uint ObjID) const @@ -5500,8 +5007,7 @@

Cone * Context::getConeObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -5528,8 +5034,7 @@

uint Context::getConeObjectSubdivisionCount ( - uint  - ObjID) + uint ObjID) const @@ -5556,8 +5061,7 @@

float Context::getConeObjectVolume ( - uint  - ObjID) + uint ObjID) const @@ -5584,7 +5088,7 @@

Date Context::getDate ( - ) + ) const @@ -5592,7 +5096,7 @@

Returns
Date vector
-
See also
setDate(), getJulianDate()
+
See also
setDate(), getJulianDate()

Definition at line 1099 of file Context.cpp.

@@ -5607,8 +5111,7 @@

helios::vec3 Context::getDiskObjectCenter ( - uint  - ObjID) + uint ObjID) const @@ -5635,8 +5138,7 @@

Disk * Context::getDiskObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -5663,8 +5165,7 @@

helios::vec2 Context::getDiskObjectSize ( - uint  - ObjID) + uint ObjID) const @@ -5691,8 +5192,7 @@

uint Context::getDiskObjectSubdivisionCount ( - uint  - ObjID) + uint ObjID) const @@ -5719,31 +5219,22 @@

void Context::getDomainBoundingBox ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - helios::vec2 &  - xbounds, + helios::vec2 & xbounds, - helios::vec2 &  - ybounds, + helios::vec2 & ybounds, - helios::vec2 &  - zbounds  - - - - ) - const + helios::vec2 & zbounds ) const

@@ -5775,25 +5266,17 @@

void Context::getDomainBoundingBox ( - helios::vec2 &  - xbounds, + helios::vec2 & xbounds, - helios::vec2 &  - ybounds, + helios::vec2 & ybounds, - helios::vec2 &  - zbounds  - - - - ) - const + helios::vec2 & zbounds ) const

@@ -5821,25 +5304,17 @@

void Context::getDomainBoundingSphere ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - helios::vec3 &  - center, + helios::vec3 & center, - float &  - radius  - - - - ) - const + float & radius ) const

@@ -5867,19 +5342,12 @@

void Context::getDomainBoundingSphere ( - helios::vec3 &  - center, + helios::vec3 & center, - float &  - radius  - - - - ) - const + float & radius ) const

@@ -5906,19 +5374,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - double &  - data  - - - - ) - const + double & data ) const

@@ -5945,19 +5406,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - float &  - data  - - - - ) - const + float & data ) const

@@ -5984,19 +5438,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - helios::int2 &  - data  - - - - ) - const + helios::int2 & data ) const

@@ -6023,19 +5470,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - helios::int3 &  - data  - - - - ) - const + helios::int3 & data ) const

@@ -6062,19 +5502,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - helios::int4 &  - data  - - - - ) - const + helios::int4 & data ) const

@@ -6101,19 +5534,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - helios::vec2 &  - data  - - - - ) - const + helios::vec2 & data ) const

@@ -6140,19 +5566,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - helios::vec3 &  - data  - - - - ) - const + helios::vec3 & data ) const

@@ -6179,19 +5598,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - helios::vec4 &  - data  - - - - ) - const + helios::vec4 & data ) const

@@ -6218,19 +5630,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - int &  - data  - - - - ) - const + int & data ) const

@@ -6257,19 +5662,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::string &  - data  - - - - ) - const + std::string & data ) const

@@ -6296,19 +5694,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< double > &  - data  - - - - ) - const + std::vector< double > & data ) const

@@ -6335,19 +5726,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< float > &  - data  - - - - ) - const + std::vector< float > & data ) const

@@ -6374,19 +5758,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< helios::int2 > &  - data  - - - - ) - const + std::vector< helios::int2 > & data ) const

@@ -6413,19 +5790,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< helios::int3 > &  - data  - - - - ) - const + std::vector< helios::int3 > & data ) const

@@ -6452,19 +5822,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< helios::int4 > &  - data  - - - - ) - const + std::vector< helios::int4 > & data ) const

@@ -6491,19 +5854,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< helios::vec2 > &  - data  - - - - ) - const + std::vector< helios::vec2 > & data ) const

@@ -6530,19 +5886,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< helios::vec3 > &  - data  - - - - ) - const + std::vector< helios::vec3 > & data ) const

@@ -6569,19 +5918,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< helios::vec4 > &  - data  - - - - ) - const + std::vector< helios::vec4 > & data ) const

@@ -6608,19 +5950,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< int > &  - data  - - - - ) - const + std::vector< int > & data ) const

@@ -6647,19 +5982,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< std::string > &  - data  - - - - ) - const + std::vector< std::string > & data ) const

@@ -6686,19 +6014,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - std::vector< uint > &  - data  - - - - ) - const + std::vector< uint > & data ) const

@@ -6725,19 +6046,12 @@

void Context::getGlobalData ( - const char *  - label, + const char * label, - uint &  - data  - - - - ) - const + uint & data ) const

@@ -6764,8 +6078,7 @@

size_t Context::getGlobalDataSize ( - const char *  - label) + const char * label) const @@ -6793,8 +6106,7 @@

HeliosDataType Context::getGlobalDataType ( - const char *  - label) + const char * label) const @@ -6822,7 +6134,7 @@

int Context::getJulianDate ( - ) + ) const @@ -6830,7 +6142,7 @@

Returns
Julian day of year (1-366)
-
See also
setDate(), getDate()
+
See also
setDate(), getDate()

Definition at line 1132 of file Context.cpp.

@@ -6845,7 +6157,7 @@

std::vector< std::string > Context::getLoadedXMLFiles ( - ) + ) @@ -6867,7 +6179,7 @@

helios::Location Context::getLocation ( - ) + ) const @@ -6889,7 +6201,7 @@

const char * Context::getMonthString ( - ) + ) const @@ -6897,7 +6209,7 @@

Returns
Month string (e.g., Jan, Feb, Mar, etc)
-
See also
setDate(), getJulianDate()
+
See also
setDate(), getJulianDate()

Definition at line 1103 of file Context.cpp.

@@ -6912,8 +6224,7 @@

float Context::getObjectArea ( - uint  - ObjID) + uint ObjID) const @@ -6940,25 +6251,17 @@

void Context::getObjectBoundingBox ( - const std::vector< uint > &  - ObjID, + const std::vector< uint > & ObjID, - vec3 &  - min_corner, + vec3 & min_corner, - vec3 &  - max_corner  - - - - ) - const + vec3 & max_corner ) const

@@ -6986,25 +6289,17 @@

void Context::getObjectBoundingBox ( - uint  - ObjID, + uint ObjID, - vec3 &  - min_corner, + vec3 & min_corner, - vec3 &  - max_corner  - - - - ) - const + vec3 & max_corner ) const

@@ -7032,8 +6327,7 @@

helios::vec3 Context::getObjectCenter ( - uint  - ObjID) + uint ObjID) const @@ -7060,7 +6354,7 @@

uint Context::getObjectCount ( - ) + ) const @@ -7082,25 +6376,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - double &  - data  - - - - ) - const + double & data ) const

@@ -7128,25 +6414,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - float &  - data  - - - - ) - const + float & data ) const

@@ -7174,25 +6452,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - int &  - data  - - - - ) - const + int & data ) const

@@ -7220,25 +6490,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - int2 &  - data  - - - - ) - const + int2 & data ) const

@@ -7266,25 +6528,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - int3 &  - data  - - - - ) - const + int3 & data ) const

@@ -7312,25 +6566,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - int4 &  - data  - - - - ) - const + int4 & data ) const

@@ -7358,25 +6604,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::string &  - data  - - - - ) - const + std::string & data ) const

@@ -7404,25 +6642,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< double > &  - data  - - - - ) - const + std::vector< double > & data ) const

@@ -7450,25 +6680,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< float > &  - data  - - - - ) - const + std::vector< float > & data ) const

@@ -7496,25 +6718,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< int > &  - data  - - - - ) - const + std::vector< int > & data ) const

@@ -7542,25 +6756,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< int2 > &  - data  - - - - ) - const + std::vector< int2 > & data ) const

@@ -7588,25 +6794,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< int3 > &  - data  - - - - ) - const + std::vector< int3 > & data ) const

@@ -7634,25 +6832,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< int4 > &  - data  - - - - ) - const + std::vector< int4 > & data ) const

@@ -7680,25 +6870,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< std::string > &  - data  - - - - ) - const + std::vector< std::string > & data ) const

@@ -7726,25 +6908,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< uint > &  - data  - - - - ) - const + std::vector< uint > & data ) const

@@ -7772,25 +6946,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< vec2 > &  - data  - - - - ) - const + std::vector< vec2 > & data ) const

@@ -7818,25 +6984,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< vec3 > &  - data  - - - - ) - const + std::vector< vec3 > & data ) const

@@ -7864,25 +7022,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - std::vector< vec4 > &  - data  - - - - ) - const + std::vector< vec4 > & data ) const

@@ -7910,25 +7060,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - uint &  - data  - - - - ) - const + uint & data ) const

@@ -7956,25 +7098,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - vec2 &  - data  - - - - ) - const + vec2 & data ) const

@@ -8002,25 +7136,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - vec3 &  - data  - - - - ) - const + vec3 & data ) const

@@ -8048,25 +7174,17 @@

void Context::getObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - vec4 &  - data  - - - - ) - const + vec4 & data ) const

@@ -8094,19 +7212,12 @@

uint Context::getObjectDataSize ( - uint  - objID, + uint objID, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -8134,19 +7245,12 @@

HeliosDataType Context::getObjectDataType ( - uint  - objID, + uint objID, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -8175,8 +7279,7 @@

CompoundObject * Context::getObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -8203,8 +7306,7 @@

uint Context::getObjectPrimitiveCount ( - uint  - ObjID) + uint ObjID) const @@ -8231,8 +7333,7 @@

std::vector< uint > Context::getObjectPrimitiveUUIDs ( - const std::vector< std::vector< uint > > &  - ObjIDs) + const std::vector< std::vector< uint > > & ObjIDs) const @@ -8259,8 +7360,7 @@

std::vector< uint > Context::getObjectPrimitiveUUIDs ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs) const @@ -8287,8 +7387,7 @@

std::vector< uint > Context::getObjectPrimitiveUUIDs ( - uint  - ObjID) + uint ObjID) const @@ -8315,8 +7414,7 @@

std::string Context::getObjectTextureFile ( - uint  - ObjID) + uint ObjID) const @@ -8343,19 +7441,12 @@

void Context::getObjectTransformationMatrix ( - uint  - ObjID, + uint ObjID, - float(&)  - T[16]  - - - - ) - const + float(&) T[16] ) const

@@ -8382,8 +7473,7 @@

helios::ObjectType Context::getObjectType ( - uint  - ObjID) + uint ObjID) const @@ -8410,8 +7500,7 @@

helios::vec3 Context::getPatchCenter ( - uint  - UUID) + uint UUID) const @@ -8440,8 +7529,7 @@

helios::vec2 Context::getPatchSize ( - uint  - UUID) + uint UUID) const @@ -8470,8 +7558,7 @@

Polymesh * Context::getPolymeshObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -8498,8 +7585,7 @@

float Context::getPolymeshObjectVolume ( - uint  - ObjID) + uint ObjID) const @@ -8526,8 +7612,7 @@

float Context::getPrimitiveArea ( - uint  - UUID) + uint UUID) const @@ -8554,25 +7639,17 @@

void Context::getPrimitiveBoundingBox ( - const std::vector< uint > &  - UUID, + const std::vector< uint > & UUID, - vec3 &  - min_corner, + vec3 & min_corner, - vec3 &  - max_corner  - - - - ) - const + vec3 & max_corner ) const

@@ -8600,25 +7677,17 @@

void Context::getPrimitiveBoundingBox ( - uint  - UUID, + uint UUID, - vec3 &  - min_corner, + vec3 & min_corner, - vec3 &  - max_corner  - - - - ) - const + vec3 & max_corner ) const

@@ -8646,8 +7715,7 @@

helios::RGBcolor Context::getPrimitiveColor ( - uint  - UUID) + uint UUID) const @@ -8674,8 +7742,7 @@

helios::RGBcolor Context::getPrimitiveColorRGB ( - uint  - UUID) + uint UUID) const @@ -8702,8 +7769,7 @@

helios::RGBAcolor Context::getPrimitiveColorRGBA ( - uint  - UUID) + uint UUID) const @@ -8730,25 +7796,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - double &  - data  - - - - ) - const + double & data ) const

@@ -8776,25 +7834,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - float &  - data  - - - - ) - const + float & data ) const

@@ -8822,25 +7872,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - int &  - data  - - - - ) - const + int & data ) const

@@ -8868,25 +7910,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - int2 &  - data  - - - - ) - const + int2 & data ) const

@@ -8914,25 +7948,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - int3 &  - data  - - - - ) - const + int3 & data ) const

@@ -8960,25 +7986,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - int4 &  - data  - - - - ) - const + int4 & data ) const

@@ -9006,25 +8024,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::string &  - data  - - - - ) - const + std::string & data ) const

@@ -9052,25 +8062,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< double > &  - data  - - - - ) - const + std::vector< double > & data ) const

@@ -9098,25 +8100,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< float > &  - data  - - - - ) - const + std::vector< float > & data ) const

@@ -9144,25 +8138,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< int > &  - data  - - - - ) - const + std::vector< int > & data ) const

@@ -9190,25 +8176,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< int2 > &  - data  - - - - ) - const + std::vector< int2 > & data ) const

@@ -9236,25 +8214,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< int3 > &  - data  - - - - ) - const + std::vector< int3 > & data ) const

@@ -9282,25 +8252,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< int4 > &  - data  - - - - ) - const + std::vector< int4 > & data ) const

@@ -9328,25 +8290,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< std::string > &  - data  - - - - ) - const + std::vector< std::string > & data ) const

@@ -9374,25 +8328,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< uint > &  - data  - - - - ) - const + std::vector< uint > & data ) const

@@ -9420,25 +8366,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< vec2 > &  - data  - - - - ) - const + std::vector< vec2 > & data ) const

@@ -9466,25 +8404,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< vec3 > &  - data  - - - - ) - const + std::vector< vec3 > & data ) const

@@ -9512,25 +8442,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - std::vector< vec4 > &  - data  - - - - ) - const + std::vector< vec4 > & data ) const

@@ -9558,25 +8480,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - uint &  - data  - - - - ) - const + uint & data ) const

@@ -9604,25 +8518,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - vec2 &  - data  - - - - ) - const + vec2 & data ) const

@@ -9650,25 +8556,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - vec3 &  - data  - - - - ) - const + vec3 & data ) const

@@ -9696,25 +8594,17 @@

void Context::getPrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - label, + const char * label, - vec4 &  - data  - - - - ) - const + vec4 & data ) const

@@ -9742,19 +8632,12 @@

uint Context::getPrimitiveDataSize ( - uint  - UUID, + uint UUID, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -9782,19 +8665,12 @@

HeliosDataType Context::getPrimitiveDataType ( - uint  - UUID, + uint UUID, - const char *  - label  - - - - ) - const + const char * label ) const

@@ -9823,8 +8699,7 @@

helios::vec3 Context::getPrimitiveNormal ( - uint  - UUID) + uint UUID) const @@ -9851,8 +8726,7 @@

uint Context::getPrimitiveParentObjectID ( - uint  - UUID) + uint UUID) const @@ -9879,8 +8753,7 @@

float Context::getPrimitiveSolidFraction ( - uint  - UUID) + uint UUID) const @@ -9908,8 +8781,7 @@

std::string Context::getPrimitiveTextureFile ( - uint  - UUID) + uint UUID) const @@ -9937,8 +8809,7 @@

helios::int2 Context::getPrimitiveTextureSize ( - uint  - UUID) + uint UUID) const @@ -9966,8 +8837,7 @@

const std::vector< std::vector< bool > > * Context::getPrimitiveTextureTransparencyData ( - uint  - UUID) + uint UUID) const @@ -9995,8 +8865,7 @@

std::vector< helios::vec2 > Context::getPrimitiveTextureUV ( - uint  - UUID) + uint UUID) const @@ -10023,19 +8892,12 @@

void Context::getPrimitiveTransformationMatrix ( - uint  - UUID, + uint UUID, - float(&)  - T[16]  - - - - ) - const + float(&) T[16] ) const

@@ -10062,8 +8924,7 @@

PrimitiveType Context::getPrimitiveType ( - uint  - UUID) + uint UUID) const @@ -10090,8 +8951,7 @@

std::vector< helios::vec3 > Context::getPrimitiveVertices ( - uint  - UUID) + uint UUID) const @@ -10118,7 +8978,7 @@

std::minstd_rand0 * Context::getRandomGenerator ( - ) + ) @@ -10140,8 +9000,7 @@

helios::vec3 Context::getSphereObjectCenter ( - uint  - ObjID) + uint ObjID) const @@ -10168,8 +9027,7 @@

Sphere * Context::getSphereObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -10196,8 +9054,7 @@

helios::vec3 Context::getSphereObjectRadius ( - uint  - ObjID) + uint ObjID) const @@ -10224,8 +9081,7 @@

uint Context::getSphereObjectSubdivisionCount ( - uint  - ObjID) + uint ObjID) const @@ -10252,8 +9108,7 @@

float Context::getSphereObjectVolume ( - uint  - ObjID) + uint ObjID) const @@ -10280,8 +9135,7 @@

std::vector< float > Context::getTileObjectAreaRatio ( - const std::vector< uint > &  - ObjectID) + const std::vector< uint > & ObjectID) const @@ -10308,8 +9162,7 @@

float Context::getTileObjectAreaRatio ( - uint  - ObjectID) + uint ObjectID) const @@ -10336,8 +9189,7 @@

helios::vec3 Context::getTileObjectCenter ( - uint  - ObjID) + uint ObjID) const @@ -10366,8 +9218,7 @@

helios::vec3 Context::getTileObjectNormal ( - uint  - ObjID) + uint ObjID) const @@ -10394,8 +9245,7 @@

Tile * Context::getTileObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -10422,8 +9272,7 @@

helios::vec2 Context::getTileObjectSize ( - uint  - ObjID) + uint ObjID) const @@ -10450,8 +9299,7 @@

helios::int2 Context::getTileObjectSubdivisionCount ( - uint  - ObjID) + uint ObjID) const @@ -10478,8 +9326,7 @@

std::vector< helios::vec2 > Context::getTileObjectTextureUV ( - uint  - ObjID) + uint ObjID) const @@ -10506,8 +9353,7 @@

std::vector< helios::vec3 > Context::getTileObjectVertices ( - uint  - ObjID) + uint ObjID) const @@ -10534,7 +9380,7 @@

Time Context::getTime ( - ) + ) const @@ -10542,7 +9388,7 @@

Returns
Time vector
-
See also
setTime()
+
See also
setTime()

Definition at line 1166 of file Context.cpp.

@@ -10557,19 +9403,12 @@

helios::vec3 Context::getTriangleVertex ( - uint  - UUID, + uint UUID, - uint  - number  - - - - ) - const + uint number ) const

@@ -10598,8 +9437,7 @@

std::vector< RGBcolor > Context::getTubeObjectNodeColors ( - uint  - ObjID) + uint ObjID) const @@ -10626,8 +9464,7 @@

std::vector< float > Context::getTubeObjectNodeRadii ( - uint  - ObjID) + uint ObjID) const @@ -10654,8 +9491,7 @@

std::vector< helios::vec3 > Context::getTubeObjectNodes ( - uint  - ObjID) + uint ObjID) const @@ -10682,8 +9518,7 @@

Tube * Context::getTubeObjectPointer ( - uint  - ObjID) + uint ObjID) const @@ -10710,19 +9545,12 @@

float Context::getTubeObjectSegmentVolume ( - uint  - ObjID, + uint ObjID, - uint  - segment_index  - - - - ) - const + uint segment_index ) const

@@ -10749,8 +9577,7 @@

uint Context::getTubeObjectSubdivisionCount ( - uint  - ObjectID) + uint ObjectID) const @@ -10777,8 +9604,7 @@

float Context::getTubeObjectVolume ( - uint  - ObjID) + uint ObjID) const @@ -10805,8 +9631,7 @@

std::vector< uint > Context::getUniquePrimitiveParentObjectIDs ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) const @@ -10833,19 +9658,12 @@

std::vector< uint > Context::getUniquePrimitiveParentObjectIDs ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - bool  - include_ObjID_zero  - - - - ) - const + bool include_ObjID_zero ) const

@@ -10871,8 +9689,7 @@

helios::vec3 Context::getVoxelCenter ( - uint  - UUID) + uint UUID) const @@ -10901,8 +9718,7 @@

helios::vec3 Context::getVoxelSize ( - uint  - UUID) + uint UUID) const @@ -10931,14 +9747,13 @@

void Context::hideObject ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs)

-

Hide compound objects in the Context such that their object IDs are not returned in Context::getAllObjectIDs(), and are not counted in Context::getObjectCount()

+

Hide compound objects in the Context such that their object IDs are not returned in Context::getAllObjectIDs(), and are not counted in Context::getObjectCount()

Parameters
@@ -10959,14 +9774,13 @@

void Context::hidePrimitive

- - +
[in]ObjIDIdentifier of the object.
(const std::vector< uint > & UUIDs)const std::vector< uint > & UUIDs)
-

Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()

+

Hide primitives in the Context such that their UUIDs are not returned in Context::getAllUUIDs()

Parameters
@@ -10987,19 +9801,12 @@

void Context::incrementGlobalData

- - + - - - - - - - +
[in]UUIDsVector of primitive UUIDs to hide
(const char * label, const char * label,
double increment 
)double increment )
@@ -11027,19 +9834,12 @@

void Context::incrementGlobalData ( - const char *  - label, + const char * label, - float  - increment  - - - - ) - + float increment )

@@ -11067,19 +9867,12 @@

void Context::incrementGlobalData ( - const char *  - label, + const char * label, - int  - increment  - - - - ) - + int increment )

@@ -11107,19 +9900,12 @@

void Context::incrementGlobalData ( - const char *  - label, + const char * label, - uint  - increment  - - - - ) - + uint increment )

@@ -11147,25 +9933,17 @@

void Context::incrementPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - double  - increment  - - - - ) - + double increment )

@@ -11194,25 +9972,17 @@

void Context::incrementPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - float  - increment  - - - - ) - + float increment )

@@ -11241,25 +10011,17 @@

void Context::incrementPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - int  - increment  - - - - ) - + int increment )

@@ -11288,25 +10050,17 @@

void Context::incrementPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - uint  - increment  - - - - ) - + uint increment )

@@ -11335,16 +10089,16 @@

bool Context::isGeometryDirty ( - ) + ) const

Query whether the Context geometry is "dirty", meaning has the geometry been modified since last set as clean.

-
See also
markGeometryClean()
+
See also
markGeometryClean()
-markGeometryDirty()
+markGeometryDirty()

Definition at line 157 of file Context.cpp.

@@ -11359,8 +10113,7 @@

bool Context::isObjectHidden ( - uint  - ObjID) + uint ObjID) const @@ -11388,8 +10141,7 @@

bool Context::isPrimitiveHidden ( - uint  - UUID) + uint UUID) const @@ -11417,8 +10169,7 @@

bool Context::isPrimitiveTextureColorOverridden ( - uint  - UUID) + uint UUID) const @@ -11445,7 +10196,7 @@

std::vector< std::string > Context::listGlobalData ( - ) + ) const @@ -11467,8 +10218,7 @@

std::vector< std::string > Context::listObjectData ( - uint  - ObjID) + uint ObjID) const @@ -11489,8 +10239,7 @@

std::vector< std::string > Context::listPrimitiveData ( - uint  - UUID) + uint UUID) const @@ -11511,7 +10260,7 @@

std::vector< std::string > Context::listTimeseriesVariables ( - ) + ) const @@ -11532,19 +10281,12 @@

std::vector< uint > Context::loadOBJ ( - const char *  - filename, + const char * filename, - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11571,49 +10313,37 @@

std::vector< uint > Context::loadOBJ ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - const helios::vec3 &  - scale, + const helios::vec3 & scale, - const SphericalCoord &  - rotation, + const SphericalCoord & rotation, - const RGBcolor &  - default_color, + const RGBcolor & default_color, - const char *  - upaxis, + const char * upaxis, - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11646,43 +10376,32 @@

std::vector< uint > Context::loadOBJ ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - float  - height, + float height, - const SphericalCoord &  - rotation, + const SphericalCoord & rotation, - const RGBcolor &  - default_color, + const RGBcolor & default_color, - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11714,49 +10433,37 @@

std::vector< uint > Context::loadOBJ ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - float  - height, + float height, - const SphericalCoord &  - rotation, + const SphericalCoord & rotation, - const RGBcolor &  - default_color, + const RGBcolor & default_color, - const char *  - upaxis, + const char * upaxis, - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11789,19 +10496,12 @@

std::vector< uint > Context::loadPLY ( - const char *  - filename, + const char * filename, - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11830,43 +10530,32 @@

std::vector< uint > Context::loadPLY ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - float  - height, + float height, - const RGBcolor &  - default_color, + const RGBcolor & default_color, - const std::string &  - upaxis = "YUP", + const std::string & upaxis = "YUP", - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11898,49 +10587,37 @@

std::vector< uint > Context::loadPLY ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - float  - height, + float height, - const SphericalCoord &  - rotation, + const SphericalCoord & rotation, - const RGBcolor &  - default_color, + const RGBcolor & default_color, - const std::string &  - upaxis = "YUP", + const std::string & upaxis = "YUP", - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -11973,43 +10650,32 @@

std::vector< uint > Context::loadPLY ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - float  - height, + float height, - const SphericalCoord &  - rotation, + const SphericalCoord & rotation, - const std::string &  - upaxis = "YUP", + const std::string & upaxis = "YUP", - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -12042,37 +10708,27 @@

std::vector< uint > Context::loadPLY ( - const char *  - filename, + const char * filename, - const vec3 &  - origin, + const vec3 & origin, - float  - height, + float height, - const std::string &  - upaxis = "YUP", + const std::string & upaxis = "YUP", - bool  - silent = false  - - - - ) - + bool silent = false )

@@ -12104,37 +10760,27 @@

void Context::loadTabularTimeseriesData ( - const std::string &  - data_file, + const std::string & data_file, - const std::vector< std::string > &  - column_labels, + const std::vector< std::string > & column_labels, - const std::string &  - delimiter, + const std::string & delimiter, - const std::string &  - date_string_format = "YYYYMMDD", + const std::string & date_string_format = "YYYYMMDD", - uint  - headerlines = 0  - - - - ) - + uint headerlines = 0 )

@@ -12154,19 +10800,12 @@

std::vector< uint > Context::loadXML ( - const char *  - filename, + const char * filename, - bool  - quiet = false  - - - - ) - + bool quiet = false )

@@ -12195,16 +10834,16 @@

void Context::markGeometryClean ( - ) + )

Mark the Context geometry as "clean", meaning that the geometry has not been modified since last set as clean.

-
See also
markGeometryDirty()
+
See also
markGeometryDirty()
-isGeometryDirty()
+isGeometryDirty()

Definition at line 149 of file Context.cpp.

@@ -12219,16 +10858,16 @@

void Context::markGeometryDirty ( - ) + )

Mark the Context geometry as "dirty", meaning that the geometry has been modified since last set as clean.

-
See also
markGeometryClean()
+
See also
markGeometryClean()
-isGeometryDirty()
+isGeometryDirty()

Definition at line 153 of file Context.cpp.

@@ -12243,8 +10882,7 @@

bool Context::objectHasTexture ( - uint  - ObjID) + uint ObjID) const @@ -12271,8 +10909,7 @@

void Context::overrideObjectTextureColor ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs) @@ -12299,8 +10936,7 @@

void Context::overrideObjectTextureColor ( - uint  - ObjID) + uint ObjID) @@ -12327,8 +10963,7 @@

void Context::overridePrimitiveTextureColor ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -12355,8 +10990,7 @@

void Context::overridePrimitiveTextureColor ( - uint  - UUID) + uint UUID) @@ -12383,8 +11017,7 @@

bool Context::primitiveTextureHasTransparencyChannel ( - uint  - UUID) + uint UUID) const @@ -12412,8 +11045,7 @@

void Context::printObjectInfo ( - uint  - ObjID) + uint ObjID) const @@ -12440,8 +11072,7 @@

void Context::printPrimitiveInfo ( - uint  - UUID) + uint UUID) const @@ -12468,7 +11099,7 @@

float Context::randn ( - ) + ) @@ -12490,19 +11121,12 @@

float Context::randn ( - float  - mean, + float mean, - float  - stddev  - - - - ) - + float stddev )

@@ -12530,7 +11154,7 @@

float Context::randu ( - ) + ) @@ -12552,19 +11176,12 @@

float Context::randu ( - float  - min, + float min, - float  - max  - - - - ) - + float max )

@@ -12592,19 +11209,12 @@

int Context::randu ( - int  - min, + int min, - int  - max  - - - - ) - + int max )

@@ -12632,19 +11242,12 @@

void Context::renameGlobalData ( - const char *  - old_label, + const char * old_label, - const char *  - new_label  - - - - ) - + const char * new_label )

@@ -12671,25 +11274,17 @@

void Context::renameObjectData ( - uint  - objID, + uint objID, - const char *  - old_label, + const char * old_label, - const char *  - new_label  - - - - ) - + const char * new_label )

@@ -12716,25 +11311,17 @@

void Context::renamePrimitiveData ( - uint  - UUID, + uint UUID, - const char *  - old_label, + const char * old_label, - const char *  - new_label  - - - - ) - + const char * new_label )

@@ -12762,25 +11349,17 @@

void Context::rotateObject ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - float  - rotation_radians, + float rotation_radians, - const char *  - rotation_axis_xyz  - - - - ) - + const char * rotation_axis_xyz )

@@ -12808,25 +11387,17 @@

void Context::rotateObject ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - float  - rotation_radians, + float rotation_radians, - const vec3 &  - rotation_axis_vector  - - - - ) - + const vec3 & rotation_axis_vector )

@@ -12854,31 +11425,22 @@

void Context::rotateObject ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - float  - rotation_radians, + float rotation_radians, - const vec3 &  - rotation_origin, + const vec3 & rotation_origin, - const vec3 &  - rotation_axis_vector  - - - - ) - + const vec3 & rotation_axis_vector )

@@ -12907,25 +11469,17 @@

void Context::rotateObject ( - uint  - ObjID, + uint ObjID, - float  - rotation_radians, + float rotation_radians, - const char *  - rotation_axis_xyz  - - - - ) - + const char * rotation_axis_xyz )

@@ -12953,25 +11507,17 @@

void Context::rotateObject ( - uint  - ObjID, + uint ObjID, - float  - rotation_radians, + float rotation_radians, - const vec3 &  - rotation_axis_vector  - - - - ) - + const vec3 & rotation_axis_vector )

@@ -12999,31 +11545,22 @@

void Context::rotateObject ( - uint  - ObjID, + uint ObjID, - float  - rotation_radians, + float rotation_radians, - const vec3 &  - rotation_origin, + const vec3 & rotation_origin, - const vec3 &  - rotation_axis_vector  - - - - ) - + const vec3 & rotation_axis_vector )

@@ -13052,25 +11589,17 @@

void Context::rotatePrimitive ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - float  - rot, + float rot, - const char *  - axis  - - - - ) - + const char * axis )

@@ -13098,31 +11627,22 @@

void Context::rotatePrimitive ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - float  - rot, + float rot, - const helios::vec3 &  - origin, + const helios::vec3 & origin, - const vec3 &  - axis  - - - - ) - + const vec3 & axis )

@@ -13151,25 +11671,17 @@

void Context::rotatePrimitive ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - float  - rot, + float rot, - const vec3 &  - axis  - - - - ) - + const vec3 & axis )

@@ -13197,25 +11709,17 @@

void Context::rotatePrimitive ( - uint  - UUID, + uint UUID, - float  - rot, + float rot, - const char *  - axis  - - - - ) - + const char * axis )

@@ -13243,25 +11747,17 @@

void Context::rotatePrimitive ( - uint  - UUID, + uint UUID, - float  - rot, + float rot, - const helios::vec3 &  - axis  - - - - ) - + const helios::vec3 & axis )

@@ -13289,31 +11785,22 @@

void Context::rotatePrimitive ( - uint  - UUID, + uint UUID, - float  - rot, + float rot, - const helios::vec3 &  - origin, + const helios::vec3 & origin, - const helios::vec3 &  - axis  - - - - ) - + const helios::vec3 & axis )

@@ -13342,19 +11829,12 @@

void Context::scaleObject ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const helios::vec3 &  - scalefact  - - - - ) - + const helios::vec3 & scalefact )

@@ -13381,19 +11861,12 @@

void Context::scaleObject ( - uint  - ObjID, + uint ObjID, - const helios::vec3 &  - scalefact  - - - - ) - + const helios::vec3 & scalefact )

@@ -13420,19 +11893,12 @@

void Context::scaleObjectAboutCenter ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const helios::vec3 &  - scalefact  - - - - ) - + const helios::vec3 & scalefact )

@@ -13459,19 +11925,12 @@

void Context::scaleObjectAboutCenter ( - uint  - ObjID, + uint ObjID, - const helios::vec3 &  - scalefact  - - - - ) - + const helios::vec3 & scalefact )

@@ -13498,25 +11957,17 @@

void Context::scaleObjectAboutPoint ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const helios::vec3 &  - scalefact, + const helios::vec3 & scalefact, - const helios::vec3 &  - point  - - - - ) - + const helios::vec3 & point )

@@ -13544,25 +11995,17 @@

void Context::scaleObjectAboutPoint ( - uint  - ObjID, + uint ObjID, - const helios::vec3 &  - scalefact, + const helios::vec3 & scalefact, - const helios::vec3 &  - point  - - - - ) - + const helios::vec3 & point )

@@ -13590,19 +12033,12 @@

void Context::scalePrimitive ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const helios::vec3 &  - S  - - - - ) - + const helios::vec3 & S )

@@ -13629,19 +12065,12 @@

void Context::scalePrimitive ( - uint  - UUID, + uint UUID, - const helios::vec3 &  - S  - - - - ) - + const helios::vec3 & S )

@@ -13668,25 +12097,17 @@

void Context::scalePrimitiveAboutPoint ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const helios::vec3 &  - S, + const helios::vec3 & S, - const helios::vec3  - point  - - - - ) - + const helios::vec3 point )

@@ -13714,25 +12135,17 @@

void Context::scalePrimitiveAboutPoint ( - uint  - UUID, + uint UUID, - const helios::vec3 &  - S, + const helios::vec3 & S, - const helios::vec3  - point  - - - - ) - + const helios::vec3 point )

@@ -13760,19 +12173,12 @@

void Context::scalePrimitiveData ( - const std::string &  - label, + const std::string & label, - float  - scaling_factor  - - - - ) - + float scaling_factor )

@@ -13800,25 +12206,17 @@

void Context::scalePrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::string &  - label, + const std::string & label, - float  - scaling_factor  - - - - ) - + float scaling_factor )

@@ -13847,19 +12245,12 @@

void Context::scaleTubeGirth ( - uint  - ObjID, + uint ObjID, - float  - scale_factor  - - - - ) - + float scale_factor )

@@ -13886,19 +12277,12 @@

void Context::scaleTubeLength ( - uint  - ObjID, + uint ObjID, - float  - scale_factor  - - - - ) - + float scale_factor )

@@ -13928,25 +12312,17 @@

bool Context::scanXMLForTag ( - const std::string &  - filename, + const std::string & filename, - const std::string &  - tag, + const std::string & tag, - const std::string &  - label = ""  - - - - ) - + const std::string & label = "" ) @@ -13980,8 +12356,7 @@

void Context::seedRandomGenerator ( - uint  - seed) + uint seed) @@ -14011,7 +12386,7 @@

int Context::selfTest ( - ) + ) @@ -14038,8 +12413,7 @@

void Context::setDate ( - const Date &  - date) + const Date & date) @@ -14052,7 +12426,7 @@

See also
getDate()
+
See also
getDate()

Definition at line 1073 of file Context.cpp.

@@ -14067,25 +12441,17 @@

void Context::setDate ( - int  - day, + int day, - int  - month, + int month, - int  - year  - - - - ) - + int year )

@@ -14099,7 +12465,7 @@

See also
getDate()
+
See also
getDate()

Definition at line 1059 of file Context.cpp.

@@ -14114,19 +12480,12 @@

void Context::setDate ( - int  - Julian_day, + int Julian_day, - int  - year  - - - - ) - + int year )

@@ -14139,7 +12498,7 @@

See also
getDate()
+
See also
getDate()

Definition at line 1087 of file Context.cpp.

@@ -14154,19 +12513,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -14193,19 +12545,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -14232,19 +12577,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -14271,19 +12609,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -14310,19 +12641,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -14349,19 +12673,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -14388,19 +12705,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -14427,19 +12737,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -14466,19 +12769,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -14505,19 +12801,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -14544,19 +12833,12 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -14583,31 +12865,22 @@

void Context::setGlobalData ( - const char *  - label, + const char * label, - HeliosDataType  - type, + HeliosDataType type, - size_t  - size, + size_t size, - void *  - data  - - - - ) - + void * data )

@@ -14635,8 +12908,7 @@

void Context::setLocation ( - const helios::Location &  - location) + const helios::Location & location) @@ -14663,19 +12935,12 @@

void Context::setObjectColor ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const helios::RGBAcolor &  - color  - - - - ) - + const helios::RGBAcolor & color )

@@ -14702,19 +12967,12 @@

void Context::setObjectColor ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -14741,19 +12999,12 @@

void Context::setObjectColor ( - uint  - ObjID, + uint ObjID, - const helios::RGBAcolor &  - color  - - - - ) - + const helios::RGBAcolor & color )

@@ -14780,19 +13031,12 @@

void Context::setObjectColor ( - uint  - ObjID, + uint ObjID, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -14819,25 +13063,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -14864,25 +13100,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -14910,25 +13138,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -14956,25 +13176,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -15002,25 +13214,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -15048,25 +13252,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -15094,25 +13290,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -15140,25 +13328,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -15186,25 +13366,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -15232,25 +13404,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -15278,25 +13442,17 @@

void Context::setObjectData ( - const std::vector< std::vector< std::vector< uint > > > &  - objIDs, + const std::vector< std::vector< std::vector< uint > > > & objIDs, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -15324,25 +13480,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -15369,25 +13517,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -15415,25 +13555,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -15461,25 +13593,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -15507,25 +13631,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -15553,25 +13669,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -15599,25 +13707,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -15645,25 +13745,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -15691,25 +13783,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -15737,25 +13821,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -15783,25 +13859,17 @@

void Context::setObjectData ( - const std::vector< std::vector< uint > > &  - objIDs, + const std::vector< std::vector< uint > > & objIDs, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -15829,25 +13897,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -15874,25 +13934,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -15920,25 +13972,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -15966,25 +14010,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -16012,25 +14048,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -16058,25 +14086,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -16104,25 +14124,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -16150,25 +14162,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -16196,25 +14200,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -16242,25 +14238,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -16288,25 +14276,17 @@

void Context::setObjectData ( - const std::vector< uint > &  - objIDs, + const std::vector< uint > & objIDs, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -16334,25 +14314,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -16379,25 +14351,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -16425,25 +14389,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -16471,25 +14427,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -16517,25 +14465,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -16563,25 +14503,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -16609,25 +14541,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -16655,25 +14579,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -16701,25 +14617,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -16747,25 +14655,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -16793,25 +14693,17 @@

void Context::setObjectData ( - uint  - objID, + uint objID, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -16839,37 +14731,27 @@

void Context::setObjectData ( - uint  - objIDs, + uint objIDs, - const char *  - label, + const char * label, - HeliosDataType  - type, + HeliosDataType type, - uint  - size, + uint size, - void *  - data  - - - - ) - + void * data )

@@ -16899,19 +14781,12 @@

void Context::setObjectTransformationMatrix ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - float(&)  - T[16]  - - - - ) - + float(&) T[16] )

@@ -16938,19 +14813,12 @@

void Context::setObjectTransformationMatrix ( - uint  - ObjID, + uint ObjID, - float(&)  - T[16]  - - - - ) - + float(&) T[16] )

@@ -16977,19 +14845,12 @@

void Context::setPrimitiveColor ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const helios::RGBAcolor &  - color  - - - - ) - + const helios::RGBAcolor & color )

@@ -17016,19 +14877,12 @@

void Context::setPrimitiveColor ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -17055,19 +14909,12 @@

void Context::setPrimitiveColor ( - uint  - UUID, + uint UUID, - const helios::RGBAcolor &  - color  - - - - ) - + const helios::RGBAcolor & color )

@@ -17094,19 +14941,12 @@

void Context::setPrimitiveColor ( - uint  - UUID, + uint UUID, - const helios::RGBcolor &  - color  - - - - ) - + const helios::RGBcolor & color )

@@ -17133,25 +14973,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -17178,25 +15010,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -17224,25 +15048,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -17270,25 +15086,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -17316,25 +15124,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -17362,25 +15162,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -17408,25 +15200,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -17454,25 +15238,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -17500,25 +15276,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -17546,25 +15314,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -17592,25 +15352,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< std::vector< uint > > > &  - UUIDs, + const std::vector< std::vector< std::vector< uint > > > & UUIDs, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -17638,25 +15390,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -17683,25 +15427,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -17729,25 +15465,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -17775,25 +15503,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -17821,25 +15541,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -17867,25 +15579,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -17913,25 +15617,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -17959,25 +15655,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -18005,25 +15693,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -18051,25 +15731,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -18097,25 +15769,17 @@

void Context::setPrimitiveData ( - const std::vector< std::vector< uint > > &  - UUIDs, + const std::vector< std::vector< uint > > & UUIDs, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -18143,25 +15807,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -18188,25 +15844,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -18234,25 +15882,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -18280,25 +15920,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -18326,25 +15958,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -18372,25 +15996,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -18418,25 +16034,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -18464,25 +16072,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -18510,25 +16110,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -18556,25 +16148,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -18602,25 +16186,17 @@

void Context::setPrimitiveData ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -18648,25 +16224,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const double &  - data  - - - - ) - + const double & data )

@@ -18693,25 +16261,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const float &  - data  - - - - ) - + const float & data )

@@ -18739,25 +16299,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const helios::int2 &  - data  - - - - ) - + const helios::int2 & data )

@@ -18785,25 +16337,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const helios::int3 &  - data  - - - - ) - + const helios::int3 & data )

@@ -18831,25 +16375,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const helios::int4 &  - data  - - - - ) - + const helios::int4 & data )

@@ -18877,25 +16413,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const helios::vec2 &  - data  - - - - ) - + const helios::vec2 & data )

@@ -18923,25 +16451,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const helios::vec3 &  - data  - - - - ) - + const helios::vec3 & data )

@@ -18969,25 +16489,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const helios::vec4 &  - data  - - - - ) - + const helios::vec4 & data )

@@ -19015,25 +16527,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const int &  - data  - - - - ) - + const int & data )

@@ -19061,25 +16565,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const std::string &  - data  - - - - ) - + const std::string & data )

@@ -19107,25 +16603,17 @@

void Context::setPrimitiveData ( - const uint &  - UUID, + const uint & UUID, - const char *  - label, + const char * label, - const uint &  - data  - - - - ) - + const uint & data )

@@ -19153,37 +16641,27 @@

void Context::setPrimitiveData ( - const uint &  - UUIDs, + const uint & UUIDs, - const char *  - label, + const char * label, - HeliosDataType  - type, + HeliosDataType type, - uint  - size, + uint size, - void *  - data  - - - - ) - + void * data )

@@ -19213,19 +16691,12 @@

void Context::setPrimitiveParentObjectID ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - uint  - objID  - - - - ) - + uint objID )

@@ -19252,19 +16723,12 @@

void Context::setPrimitiveParentObjectID ( - uint  - UUID, + uint UUID, - uint  - objID  - - - - ) - + uint objID )

@@ -19291,19 +16755,12 @@

void Context::setPrimitiveTextureFile ( - uint  - UUID, + uint UUID, - const std::string &  - texturefile  - - - - ) - + const std::string & texturefile )

@@ -19330,19 +16787,12 @@

void Context::setPrimitiveTransformationMatrix ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - float(&)  - T[16]  - - - - ) - + float(&) T[16] )

@@ -19369,19 +16819,12 @@

void Context::setPrimitiveTransformationMatrix ( - uint  - UUID, + uint UUID, - float(&)  - T[16]  - - - - ) - + float(&) T[16] )

@@ -19408,19 +16851,12 @@

void Context::setTileObjectSubdivisionCount ( - const std::vector< uint > &  - ObjectIDs, + const std::vector< uint > & ObjectIDs, - const int2 &  - new_subdiv  - - - - ) - + const int2 & new_subdiv )

@@ -19447,19 +16883,12 @@

void Context::setTileObjectSubdivisionCount ( - const std::vector< uint > &  - ObjectIDs, + const std::vector< uint > & ObjectIDs, - float  - area_ratio  - - - - ) - + float area_ratio )

@@ -19486,8 +16915,7 @@

void Context::setTime ( - const Time &  - time) + const Time & time) @@ -19500,7 +16928,7 @@

See also
getTime()
+
See also
getTime()
setSunDirection()
@@ -19517,19 +16945,12 @@

void Context::setTime ( - int  - minute, + int minute, - int  - hour  - - - - ) - + int hour )

@@ -19542,7 +16963,7 @@

See also
getTime()
+
See also
getTime()
setSunDirection()
@@ -19559,25 +16980,17 @@

void Context::setTime ( - int  - second, + int second, - int  - minute, + int minute, - int  - hour  - - - - ) - + int hour )

@@ -19591,7 +17004,7 @@

See also
getTime()
+
See also
getTime()
setSunDirection()
@@ -19608,31 +17021,22 @@

void Context::setTriangleVertices ( - uint  - UUID, + uint UUID, - const helios::vec3 &  - vertex0, + const helios::vec3 & vertex0, - const helios::vec3 &  - vertex1, + const helios::vec3 & vertex1, - const helios::vec3 &  - vertex2  - - - - ) - + const helios::vec3 & vertex2 )

@@ -19661,19 +17065,12 @@

void Context::setTubeNodes ( - uint  - ObjID, + uint ObjID, - const std::vector< helios::vec3 > &  - node_xyz  - - - - ) - + const std::vector< helios::vec3 > & node_xyz )

@@ -19700,19 +17097,12 @@

void Context::setTubeRadii ( - uint  - ObjID, + uint ObjID, - const std::vector< float > &  - node_radii  - - - - ) - + const std::vector< float > & node_radii )

@@ -19739,8 +17129,7 @@

float Context::sumPrimitiveSurfaceArea ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) const @@ -19768,19 +17157,12 @@

void Context::translateObject ( - const std::vector< uint > &  - ObjIDs, + const std::vector< uint > & ObjIDs, - const vec3 &  - shift  - - - - ) - + const vec3 & shift )

@@ -19807,19 +17189,12 @@

void Context::translateObject ( - uint  - ObjID, + uint ObjID, - const vec3 &  - shift  - - - - ) - + const vec3 & shift )

@@ -19846,19 +17221,12 @@

void Context::translatePrimitive ( - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const vec3 &  - shift  - - - - ) - + const vec3 & shift )

@@ -19885,19 +17253,12 @@

void Context::translatePrimitive ( - uint  - UUID, + uint UUID, - const vec3 &  - shift  - - - - ) - + const vec3 & shift )

@@ -19924,8 +17285,7 @@

void Context::useObjectTextureColor ( - const std::vector< uint > &  - ObjIDs) + const std::vector< uint > & ObjIDs) @@ -19952,8 +17312,7 @@

void Context::useObjectTextureColor ( - uint  - ObjID) + uint ObjID) @@ -19980,8 +17339,7 @@

void Context::usePrimitiveTextureColor ( - const std::vector< uint > &  - UUIDs) + const std::vector< uint > & UUIDs) @@ -20008,8 +17366,7 @@

void Context::usePrimitiveTextureColor ( - uint  - UUID) + uint UUID) @@ -20036,8 +17393,7 @@

void Context::writeOBJ ( - const std::string &  - filename) + const std::string & filename) const @@ -20064,19 +17420,12 @@

void Context::writeOBJ ( - const std::string &  - filename, + const std::string & filename, - const std::vector< uint > &  - UUIDs  - - - - ) - const + const std::vector< uint > & UUIDs ) const

@@ -20103,25 +17452,17 @@

void Context::writeOBJ ( - const std::string &  - filename, + const std::string & filename, - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - const std::vector< std::string > &  - primitive_dat_fields  - - - - ) - const + const std::vector< std::string > & primitive_dat_fields ) const

@@ -20149,8 +17490,7 @@

void Context::writePLY ( - const char *  - filename) + const char * filename) const @@ -20177,25 +17517,17 @@

void Context::writePrimitiveData ( - std::string  - filename, + std::string filename, - const std::vector< std::string > &  - column_format, + const std::vector< std::string > & column_format, - bool  - print_header = false  - - - - ) - const + bool print_header = false ) const

@@ -20223,31 +17555,22 @@

void Context::writePrimitiveData ( - std::string  - filename, + std::string filename, - const std::vector< std::string > &  - column_format, + const std::vector< std::string > & column_format, - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - bool  - print_header = false  - - - - ) - const + bool print_header = false ) const

@@ -20276,19 +17599,12 @@

void Context::writeXML ( - const char *  - filename, + const char * filename, - bool  - quiet = false  - - - - ) - const + bool quiet = false ) const

@@ -20315,25 +17631,17 @@

void Context::writeXML ( - const char *  - filename, + const char * filename, - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - bool  - quiet = false  - - - - ) - const + bool quiet = false ) const

@@ -20361,25 +17669,17 @@

void Context::writeXML_byobject ( - const char *  - filename, + const char * filename, - const std::vector< uint > &  - UUIDs, + const std::vector< uint > & UUIDs, - bool  - quiet = false  - - - - ) - const + bool quiet = false ) const

@@ -20408,7 +17708,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_disk.html b/doc/html/classhelios_1_1_disk.html index e4a77be4a..f096342f1 100644 --- a/doc/html/classhelios_1_1_disk.html +++ b/doc/html/classhelios_1_1_disk.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Disk compound object class. - More...

+ More...

#include <Context.h>

@@ -112,225 +124,225 @@ - + - - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Disk (uint a_OID, const std::vector< uint > &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Disk (uint a_OID, const std::vector< uint > &a_UUIDs, int2 a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Disk () override=default
 Disk destructor.
 
vec2 getSize () const
vec2 getSize () const
 Get the lateral dimensions of the disk object.
 
vec3 getCenter () const
vec3 getCenter () const
 Get the Cartesian coordinates of the center of the disk object.
 
int2 getSubdivisionCount () const
int2 getSubdivisionCount () const
 Get the number of sub-triangle divisions of the disk object.
 
void setSubdivisionCount (int2 subdiv)
void setSubdivisionCount (int2 subdiv)
 Set the number of disk sub-triangle divisions.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -347,37 +359,27 @@

Disk::Disk ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - int2  - a_subdiv, + int2 a_subdiv, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -398,7 +400,7 @@

vec3 Disk::getCenter ( - ) + ) const @@ -419,7 +421,7 @@

vec2 Disk::getSize ( - ) + ) const @@ -440,7 +442,7 @@

int2 Disk::getSubdivisionCount ( - ) + ) const @@ -461,8 +463,7 @@

void Disk::setSubdivisionCount ( - int2  - subdiv) + int2 subdiv) @@ -480,7 +481,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -512,7 +513,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_disk.png b/doc/html/classhelios_1_1_disk.png index dca1f1c18a0ce1dadc9ce246dbc7f3914b15dc91..aa8d506303f496ddee970c2eda0f48c7bef25260 100644 GIT binary patch delta 21 dcmcc1a+hU-9oK^g5B~rEZ+bRt$wm)RCIEqe3q$|_ delta 21 dcmcc1a+hU-9oK;a2mb&6A3W*uij5wkOaOlM3rGL} diff --git a/doc/html/classhelios_1_1_polymesh.html b/doc/html/classhelios_1_1_polymesh.html index 554a8734a..fd8440fca 100644 --- a/doc/html/classhelios_1_1_polymesh.html +++ b/doc/html/classhelios_1_1_polymesh.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Polymesh compound object class. - More...

+ More...

#include <Context.h>

@@ -112,216 +124,216 @@ - + - - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Polymesh (uint a_OID, const std::vector< uint > &a_UUIDs, const char *a_texturefile, helios::Context *a_context)
 Polymesh (uint a_OID, const std::vector< uint > &a_UUIDs, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Polymesh () override=default
 Polymesh destructor.
 
float getVolume () const
float getVolume () const
 Get the volume of the polymesh object.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -338,31 +350,22 @@

Polymesh::Polymesh ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -383,7 +386,7 @@

float Polymesh::getVolume ( - ) + ) const @@ -395,7 +398,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -427,7 +430,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_polymesh.png b/doc/html/classhelios_1_1_polymesh.png index 020594b988ab4220d53e11b2850c3b20bee84eee..6de10d8727c7debcf7e546d0514a05c37572325d 100644 GIT binary patch delta 21 dcmeBR?O>f?$MxXBga7~ko1P6@veCnV2>^7o3daBd delta 21 dcmeBR?O>f?$93Sqf&c&i2T!`ZVxxxx699543d;Zh diff --git a/doc/html/classhelios_1_1_sphere.html b/doc/html/classhelios_1_1_sphere.html index effc6f3ee..f1db431fa 100644 --- a/doc/html/classhelios_1_1_sphere.html +++ b/doc/html/classhelios_1_1_sphere.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Sphere compound object class. - More...

+ More...

#include <Context.h>

@@ -112,228 +124,228 @@ - + - - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Sphere (uint a_OID, const std::vector< uint > &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Sphere (uint a_OID, const std::vector< uint > &a_UUIDs, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Sphere () override=default
 Sphere destructor.
 
helios::vec3 getRadius () const
helios::vec3 getRadius () const
 Get the radius of the sphere.
 
vec3 getCenter () const
vec3 getCenter () const
 Get the Cartesian coordinates of the center of the sphere object.
 
uint getSubdivisionCount () const
uint getSubdivisionCount () const
 Get the number of sub-patch divisions of the sphere object.
 
void setSubdivisionCount (uint subdiv)
void setSubdivisionCount (uint subdiv)
 Set the number of sphere tesselation divisions.
 
float getVolume () const
float getVolume () const
 Get the volume of the sphere object.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -350,37 +362,27 @@

Sphere::Sphere ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - uint  - a_subdiv, + uint a_subdiv, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -401,7 +403,7 @@

vec3 Sphere::getCenter ( - ) + ) const @@ -422,7 +424,7 @@

helios::vec3 Sphere::getRadius ( - ) + ) const @@ -443,7 +445,7 @@

uint Sphere::getSubdivisionCount ( - ) + ) const @@ -464,7 +466,7 @@

float Sphere::getVolume ( - ) + ) const @@ -485,8 +487,7 @@

void Sphere::setSubdivisionCount ( - uint  - subdiv) + uint subdiv) @@ -504,7 +505,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -536,7 +537,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_sphere.png b/doc/html/classhelios_1_1_sphere.png index d767d57ebb7128b3144d8583985745fd5f89d781..0384fba0d831c938ca7c3132ff60c8f9341eed77 100644 GIT binary patch delta 21 dcmey#@{?tP9oK^g5B~rEZ+bRt$wm)DCIE&Q3zz@^ delta 21 dcmey#@{?tP9oK;a2mb&6A3W*uij5wIOaOz83!DG| diff --git a/doc/html/classhelios_1_1_texture.html b/doc/html/classhelios_1_1_texture.html index e3931024d..ac3125636 100644 --- a/doc/html/classhelios_1_1_texture.html +++ b/doc/html/classhelios_1_1_texture.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions
@@ -96,28 +108,28 @@

Texture map data structure. - More...

+ More...

#include <Context.h>

- + - + - + - + - + - +

Public Member Functions

 Texture (const char *texture_file)
 Texture (const char *texture_file)
 Constructor - initialize with given texture file.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Get the name/path of the texture map file.
 
helios::int2 getImageResolution () const
helios::int2 getImageResolution () const
 Get the size of the texture in pixels (horizontal x vertical)
 
bool hasTransparencyChannel () const
bool hasTransparencyChannel () const
 Check whether the texture has a transparency channel.
 
const std::vector< std::vector< bool > > * getTransparencyData () const
const std::vector< std::vector< bool > > * getTransparencyData () const
 Get the data in the texture transparency channel (if it exists)
 
float getSolidFraction () const
float getSolidFraction () const
 Get the solid fraction of the texture transparency channel (if it exists)
 
@@ -138,8 +150,7 @@

Texture::Texture ( - const char *  - texture_file) + const char * texture_file) @@ -172,7 +183,7 @@

helios::int2 Texture::getImageResolution ( - ) + ) const @@ -193,7 +204,7 @@

float Texture::getSolidFraction ( - ) + ) const @@ -214,7 +225,7 @@

std::string Texture::getTextureFile ( - ) + ) const @@ -235,7 +246,7 @@

const std::vector< std::vector< bool > > * Texture::getTransparencyData ( - ) + ) const @@ -256,7 +267,7 @@

bool Texture::hasTransparencyChannel ( - ) + ) const @@ -275,7 +286,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_tile.html b/doc/html/classhelios_1_1_tile.html index 6bb271289..4da934211 100644 --- a/doc/html/classhelios_1_1_tile.html +++ b/doc/html/classhelios_1_1_tile.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Tile compound object class. - More...

+ More...

#include <Context.h>

@@ -112,234 +124,234 @@ - + - - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Tile (uint a_OID, const std::vector< uint > &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Tile (uint a_OID, const std::vector< uint > &a_UUIDs, const int2 &a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Tile () override=default
 Tile destructor.
 
helios::vec2 getSize () const
helios::vec2 getSize () const
 Get the dimensions of the entire tile object.
 
vec3 getCenter () const
vec3 getCenter () const
 Get the Cartesian coordinates of the center of the tile object.
 
helios::int2 getSubdivisionCount () const
helios::int2 getSubdivisionCount () const
 Get the number of sub-patch divisions of the tile.
 
void setSubdivisionCount (const helios::int2 &subdiv)
void setSubdivisionCount (const helios::int2 &subdiv)
 Set the number of tile sub-patch divisions.
 
std::vector< helios::vec3 > getVertices () const
std::vector< helios::vec3 > getVertices () const
 Get the Cartesian coordinates of each of the four corners of the tile object.
 
vec3 getNormal () const
vec3 getNormal () const
 Get a unit vector normal to the tile object surface.
 
std::vector< helios::vec2 > getTextureUV () const
std::vector< helios::vec2 > getTextureUV () const
 Get the normalized (u,v) coordinates of the texture at each of the four corners of the tile object.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -356,37 +368,27 @@

Tile::Tile ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - const int2 &  - a_subdiv, + const int2 & a_subdiv, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -407,7 +409,7 @@

vec3 Tile::getCenter ( - ) + ) const @@ -428,7 +430,7 @@

vec3 Tile::getNormal ( - ) + ) const @@ -449,7 +451,7 @@

helios::vec2 Tile::getSize ( - ) + ) const @@ -470,7 +472,7 @@

helios::int2 Tile::getSubdivisionCount ( - ) + ) const @@ -491,7 +493,7 @@

std::vector< helios::vec2 > Tile::getTextureUV ( - ) + ) const @@ -512,7 +514,7 @@

std::vector< helios::vec3 > Tile::getVertices ( - ) + ) const @@ -533,8 +535,7 @@

void Tile::setSubdivisionCount ( - const helios::int2 &  - subdiv) + const helios::int2 & subdiv) @@ -553,7 +554,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -585,7 +586,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_tile.png b/doc/html/classhelios_1_1_tile.png index 3cc71ad6c1f3fcae5d0b702ac27fbe7ff4b03f23..479c0930fef0e67c23472e6e7082fafe4b77f441 100644 GIT binary patch delta 21 dcmcb}a*<_%9oK^g5B~rEZ+bRt$wm)OCIEkk3m^ah delta 21 dcmcb}a*<_%9oK;a2mb&6A3W*uij5weOaOfS3nTyl diff --git a/doc/html/classhelios_1_1_tube.html b/doc/html/classhelios_1_1_tube.html index 841f93c8a..b33088db5 100644 --- a/doc/html/classhelios_1_1_tube.html +++ b/doc/html/classhelios_1_1_tube.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Public Member Functions | @@ -97,7 +109,7 @@

Tube compound object class. - More...

+ More...

#include <Context.h>

@@ -112,255 +124,255 @@ - + - - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Public Member Functions

 Tube (uint a_OID, const std::vector< uint > &a_UUIDs, const std::vector< vec3 > &a_nodes, const std::vector< float > &a_radius, const std::vector< helios::RGBcolor > &a_colors, const std::vector< std::vector< helios::vec3 > > &a_triangle_vertices, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Tube (uint a_OID, const std::vector< uint > &a_UUIDs, const std::vector< vec3 > &a_nodes, const std::vector< float > &a_radius, const std::vector< helios::RGBcolor > &a_colors, const std::vector< std::vector< helios::vec3 > > &a_triangle_vertices, uint a_subdiv, const char *a_texturefile, helios::Context *a_context)
 Default constructor.
 
+
 ~Tube () override=default
 Tube destructor.
 
std::vector< helios::vec3 > getNodes () const
std::vector< helios::vec3 > getNodes () const
 Get the Cartesian coordinates of each of the tube object nodes.
 
std::vector< float > getNodeRadii () const
std::vector< float > getNodeRadii () const
 Get the radius at each of the tube object nodes.
 
std::vector< helios::RGBcolor > getNodeColors () const
std::vector< helios::RGBcolor > getNodeColors () const
 Get the colors at each of the tube object nodes.
 
std::vector< std::vector< helios::vec3 > > getTriangleVertices () const
std::vector< std::vector< helios::vec3 > > getTriangleVertices () const
 Get positions of triangle vertices comprising the tube object.
 
uint getSubdivisionCount () const
uint getSubdivisionCount () const
 Get the number of sub-triangle divisions of the tube object.
 
float getLength () const
float getLength () const
 Get the length of the tube object.
 
float getVolume () const
float getVolume () const
 Get the volume of the tube object.
 
float getSegmentVolume (uint segment_index) const
float getSegmentVolume (uint segment_index) const
 Get the volume of a segment within the tube object.
 
void appendTubeSegment (const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color)
void appendTubeSegment (const helios::vec3 &node_position, float node_radius, const helios::RGBcolor &node_color)
 Append an additional segment to the existing tube object.
 
void appendTubeSegment (const helios::vec3 &node_position, float node_radius, const char *texturefile, const helios::vec2 &textureuv_ufrac)
void appendTubeSegment (const helios::vec3 &node_position, float node_radius, const char *texturefile, const helios::vec2 &textureuv_ufrac)
 Append an additional segment to the existing tube object.
 
void scaleTubeGirth (float S)
void scaleTubeGirth (float S)
 Scale the girth of the tube object.
 
void setTubeRadii (const std::vector< float > &node_radii)
void setTubeRadii (const std::vector< float > &node_radii)
 Set tube radii at each segment node.
 
void scaleTubeLength (float S)
void scaleTubeLength (float S)
 Scale the length of the tube object.
 
void setTubeNodes (const std::vector< helios::vec3 > &node_xyz)
void setTubeNodes (const std::vector< helios::vec3 > &node_xyz)
 Set tube vertex coordinates at each segment node.
 
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
- Public Member Functions inherited from helios::CompoundObject
uint getObjectID () const
 Get the unique identifier for the object.
 
helios::ObjectType getObjectType () const
helios::ObjectType getObjectType () const
 Get an enumeration specifying the type of the object.
 
uint getPrimitiveCount () const
uint getPrimitiveCount () const
 Return the number of primitives contained in the object.
 
std::vector< uint > getPrimitiveUUIDs () const
std::vector< uint > getPrimitiveUUIDs () const
 Get the UUIDs for all primitives contained in the object.
 
bool doesObjectContainPrimitive (uint UUID)
bool doesObjectContainPrimitive (uint UUID)
 Check whether a primitive is a member of the object based on its UUID.
 
helios::vec3 getObjectCenter () const
helios::vec3 getObjectCenter () const
 Calculate the Cartesian (x,y,z) point of the center of a bounding box for the Compound Object.
 
float getArea () const
float getArea () const
 Calculate the total one-sided surface area of the Compound Object.
 
void setColor (const helios::RGBcolor &color)
void setColor (const helios::RGBcolor &color)
 Method to set the diffuse color for all primitives in the Compound Object.
 
void setColor (const helios::RGBAcolor &color)
void setColor (const helios::RGBAcolor &color)
 Method to set the diffuse color (with transparency) for all primitives in the Compound Object.
 
void overrideTextureColor ()
void overrideTextureColor ()
 Override the color in the texture map for all primitives in the Compound Object, in which case the primitives will be colored by the constant RGB color, but will apply the transparency channel in the texture to determine its shape.
 
void useTextureColor ()
void useTextureColor ()
 For all primitives in the Compound Object, use the texture map to color the primitives rather than the constant RGB color. This is method reverses a previous call to overrideTextureColor(). Note that using the texture color is the default behavior.
 
bool hasTexture () const
bool hasTexture () const
 Method to check whether this object has texture data.
 
std::string getTextureFile () const
std::string getTextureFile () const
 Method to return the texture map file of an Object.
 
void translate (const helios::vec3 &shift)
void translate (const helios::vec3 &shift)
 Method to translate/shift a Compound Object.
 
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
void rotate (float rotation_radians, const char *rotation_axis_xyz_string)
 Method to rotate a Compound Object about the x-, y-, or z-axis.
 
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary axis passing through the origin.
 
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
void rotate (float rotation_radians, const helios::vec3 &origin, const helios::vec3 &rotation_axis_vector)
 Method to rotate a Compound Object about an arbitrary line (not necessarily passing through the origin)
 
void scale (const helios::vec3 &scale)
void scale (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutCenter (const helios::vec3 &scale)
void scaleAboutCenter (const helios::vec3 &scale)
 Method to scale a compound object in the x-, y- and z-directions.
 
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
void scaleAboutPoint (const helios::vec3 &scale, const helios::vec3 &point)
 Method to scale a compound object in the x-, y- and z-directions.
 
void getTransformationMatrix (float(&T)[16]) const
void getTransformationMatrix (float(&T)[16]) const
 Method to return the Affine transformation matrix of a Compound Object.
 
void setTransformationMatrix (float(&T)[16])
void setTransformationMatrix (float(&T)[16])
 Method to set the Affine transformation matrix of a Compound Object.
 
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
void setPrimitiveUUIDs (const std::vector< uint > &UUIDs)
 Method to set the UUIDs of object child primitives.
 
void deleteChildPrimitive (uint UUID)
void deleteChildPrimitive (uint UUID)
 Delete a single child member of the object.
 
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
void deleteChildPrimitive (const std::vector< uint > &UUIDs)
 Delete multiple child member of the object based on a vector of UUIDs.
 
bool arePrimitivesComplete () const
bool arePrimitivesComplete () const
 Method to query whether all object primitives are in tact.
 
void setObjectData (const char *label, const int &data)
void setObjectData (const char *label, const int &data)
 Add data value (int) associated with a object element.
 
void setObjectData (const char *label, const uint &data)
void setObjectData (const char *label, const uint &data)
 Add data value (uint) associated with a object element.
 
void setObjectData (const char *label, const float &data)
void setObjectData (const char *label, const float &data)
 Add data value (float) associated with a object element.
 
void setObjectData (const char *label, const double &data)
void setObjectData (const char *label, const double &data)
 Add data value (double) associated with a object element.
 
void setObjectData (const char *label, const helios::vec2 &data)
void setObjectData (const char *label, const helios::vec2 &data)
 Add data value (vec2) associated with a object element.
 
void setObjectData (const char *label, const helios::vec3 &data)
void setObjectData (const char *label, const helios::vec3 &data)
 Add data value (vec3) associated with a object element.
 
void setObjectData (const char *label, const helios::vec4 &data)
void setObjectData (const char *label, const helios::vec4 &data)
 Add data value (vec4) associated with a object element.
 
void setObjectData (const char *label, const helios::int2 &data)
void setObjectData (const char *label, const helios::int2 &data)
 Add data value (int2) associated with a object element.
 
void setObjectData (const char *label, const helios::int3 &data)
void setObjectData (const char *label, const helios::int3 &data)
 Add data value (int3) associated with a object element.
 
void setObjectData (const char *label, const helios::int4 &data)
void setObjectData (const char *label, const helios::int4 &data)
 Add data value (int4) associated with a object element.
 
void setObjectData (const char *label, const std::string &data)
void setObjectData (const char *label, const std::string &data)
 Add data value (string) associated with a object element.
 
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
void setObjectData (const char *label, HeliosDataType type, uint size, void *data)
 Add (array) data associated with a object element.
 
void getObjectData (const char *label, int &data) const
void getObjectData (const char *label, int &data) const
 Get data associated with a object element (integer scalar)
 
void getObjectData (const char *label, std::vector< int > &data) const
void getObjectData (const char *label, std::vector< int > &data) const
 Get data associated with a object element (vector of integers)
 
void getObjectData (const char *label, uint &data) const
void getObjectData (const char *label, uint &data) const
 Get data associated with a object element (unsigned integer scalar)
 
void getObjectData (const char *label, std::vector< uint > &data) const
void getObjectData (const char *label, std::vector< uint > &data) const
 Get data associated with a object element (vector of unsigned integers)
 
void getObjectData (const char *label, float &data) const
void getObjectData (const char *label, float &data) const
 Get data associated with a object element (float scalar)
 
void getObjectData (const char *label, std::vector< float > &data) const
void getObjectData (const char *label, std::vector< float > &data) const
 Get data associated with a object element (vector of floats)
 
void getObjectData (const char *label, double &data) const
void getObjectData (const char *label, double &data) const
 Get data associated with a object element (double scalar)
 
void getObjectData (const char *label, std::vector< double > &data) const
void getObjectData (const char *label, std::vector< double > &data) const
 Get data associated with a object element (vector of doubles)
 
void getObjectData (const char *label, vec2 &data) const
void getObjectData (const char *label, vec2 &data) const
 Get data associated with a object element (vec2 scalar)
 
void getObjectData (const char *label, std::vector< vec2 > &data) const
void getObjectData (const char *label, std::vector< vec2 > &data) const
 Get data associated with a object element (vector of vec2's)
 
void getObjectData (const char *label, vec3 &data) const
void getObjectData (const char *label, vec3 &data) const
 Get data associated with a object element (vec3 scalar)
 
void getObjectData (const char *label, std::vector< vec3 > &data) const
void getObjectData (const char *label, std::vector< vec3 > &data) const
 Get data associated with a object element (vector of vec3's)
 
void getObjectData (const char *label, vec4 &data) const
void getObjectData (const char *label, vec4 &data) const
 Get data associated with a object element (vec4 scalar)
 
void getObjectData (const char *label, std::vector< vec4 > &data) const
void getObjectData (const char *label, std::vector< vec4 > &data) const
 Get data associated with a object element (vector of vec4's)
 
void getObjectData (const char *label, int2 &data) const
void getObjectData (const char *label, int2 &data) const
 Get data associated with a object element (int2 scalar)
 
void getObjectData (const char *label, std::vector< int2 > &data) const
void getObjectData (const char *label, std::vector< int2 > &data) const
 Get data associated with a object element (vector of int2's)
 
void getObjectData (const char *label, int3 &data) const
void getObjectData (const char *label, int3 &data) const
 Get data associated with a object element (int3 scalar)
 
void getObjectData (const char *label, std::vector< int3 > &data) const
void getObjectData (const char *label, std::vector< int3 > &data) const
 Get data associated with a object element (vector of int3's)
 
void getObjectData (const char *label, int4 &data) const
void getObjectData (const char *label, int4 &data) const
 Get data associated with a object element (int4 scalar)
 
void getObjectData (const char *label, std::vector< int4 > &data) const
void getObjectData (const char *label, std::vector< int4 > &data) const
 Get data associated with a object element (vector of int4's)
 
void getObjectData (const char *label, std::string &data) const
void getObjectData (const char *label, std::string &data) const
 Get data associated with a object element (string scalar)
 
void getObjectData (const char *label, std::vector< std::string > &data) const
void getObjectData (const char *label, std::vector< std::string > &data) const
 Get data associated with a object element (vector of strings)
 
HeliosDataType getObjectDataType (const char *label) const
HeliosDataType getObjectDataType (const char *label) const
 Get the Helios data type of object data.
 
uint getObjectDataSize (const char *label) const
uint getObjectDataSize (const char *label) const
 Get the size/length of object data.
 
bool doesObjectDataExist (const char *label) const
bool doesObjectDataExist (const char *label) const
 Check if object data 'label' exists.
 
void clearObjectData (const char *label)
void clearObjectData (const char *label)
 Clear the object data for this object.
 
std::vector< std::string > listObjectData () const
std::vector< std::string > listObjectData () const
 Return labels for all object data for this particular object.
 
- +

Friends

class CompoundObject
class CompoundObject
 

Detailed Description

@@ -377,61 +389,47 @@

Tube::Tube ( - uint  - a_OID, + uint a_OID, - const std::vector< uint > &  - a_UUIDs, + const std::vector< uint > & a_UUIDs, - const std::vector< vec3 > &  - a_nodes, + const std::vector< vec3 > & a_nodes, - const std::vector< float > &  - a_radius, + const std::vector< float > & a_radius, - const std::vector< helios::RGBcolor > &  - a_colors, + const std::vector< helios::RGBcolor > & a_colors, - const std::vector< std::vector< helios::vec3 > > &  - a_triangle_vertices, + const std::vector< std::vector< helios::vec3 > > & a_triangle_vertices, - uint  - a_subdiv, + uint a_subdiv, - const char *  - a_texturefile, + const char * a_texturefile, - helios::Context *  - a_context  - - - - ) - + helios::Context * a_context )

@@ -452,31 +450,22 @@

void Tube::appendTubeSegment ( - const helios::vec3 &  - node_position, + const helios::vec3 & node_position, - float  - node_radius, + float node_radius, - const char *  - texturefile, + const char * texturefile, - const helios::vec2 &  - textureuv_ufrac  - - - - ) - + const helios::vec2 & textureuv_ufrac )

@@ -505,25 +494,17 @@

void Tube::appendTubeSegment ( - const helios::vec3 &  - node_position, + const helios::vec3 & node_position, - float  - node_radius, + float node_radius, - const helios::RGBcolor &  - node_color  - - - - ) - + const helios::RGBcolor & node_color )

@@ -551,7 +532,7 @@

float Tube::getLength ( - ) + ) const @@ -572,7 +553,7 @@

std::vector< helios::RGBcolor > Tube::getNodeColors ( - ) + ) const @@ -593,7 +574,7 @@

std::vector< float > Tube::getNodeRadii ( - ) + ) const @@ -614,7 +595,7 @@

std::vector< helios::vec3 > Tube::getNodes ( - ) + ) const @@ -635,8 +616,7 @@

float Tube::getSegmentVolume ( - uint  - segment_index) + uint segment_index) const @@ -663,7 +643,7 @@

uint Tube::getSubdivisionCount ( - ) + ) const @@ -684,7 +664,7 @@

std::vector< std::vector< helios::vec3 > > Tube::getTriangleVertices ( - ) + ) const @@ -705,7 +685,7 @@

float Tube::getVolume ( - ) + ) const @@ -726,8 +706,7 @@

void Tube::scaleTubeGirth ( - float  - S) + float S) @@ -754,8 +733,7 @@

void Tube::scaleTubeLength ( - float  - S) + float S) @@ -782,8 +760,7 @@

void Tube::setTubeNodes ( - const std::vector< helios::vec3 > &  - node_xyz) + const std::vector< helios::vec3 > & node_xyz) @@ -810,8 +787,7 @@

void Tube::setTubeRadii ( - const std::vector< float > &  - node_radii) + const std::vector< float > & node_radii) @@ -829,7 +805,7 @@

Friends And Related Function Documentation

+

Friends And Related Symbol Documentation

◆ CompoundObject

@@ -861,7 +837,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/classhelios_1_1_tube.png b/doc/html/classhelios_1_1_tube.png index eaba7e8304c9f2f5d59a7e18826038f6830c25c3..e131ca2a51eb7498e46274aa4f6236547bbafad4 100644 GIT binary patch delta 21 dcmcb^a))Jt9oK^g5B~rEZ+bRt$wm(mCIEp}3qb$? delta 21 dcmcb^a))Jt9oK;a2mb&6A3W*uij5v3OaOk%3q=3` diff --git a/doc/html/classhelios_1_1_x_m_lparser.html b/doc/html/classhelios_1_1_x_m_lparser.html index 671bfdc6a..c8887b2ff 100644 --- a/doc/html/classhelios_1_1_x_m_lparser.html +++ b/doc/html/classhelios_1_1_x_m_lparser.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
Static Public Member Functions
@@ -96,76 +108,76 @@

Class for parsing XML input files. - More...

+ More...

#include <Context.h>

- + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

Static Public Member Functions

static int parse_data_float (const pugi::xml_node &node_data, std::vector< float > &data)
static int parse_data_float (const pugi::xml_node &node_data, std::vector< float > &data)
 Parse vector data of type 'float' within an XML tag.
 
static int parse_data_double (const pugi::xml_node &node_data, std::vector< double > &data)
static int parse_data_double (const pugi::xml_node &node_data, std::vector< double > &data)
 Parse vector data of type 'double' within an XML tag.
 
static int parse_data_int (const pugi::xml_node &node_data, std::vector< int > &data)
static int parse_data_int (const pugi::xml_node &node_data, std::vector< int > &data)
 Parse vector data of type 'int' within an XML tag.
 
static int parse_data_uint (const pugi::xml_node &node_data, std::vector< uint > &data)
static int parse_data_uint (const pugi::xml_node &node_data, std::vector< uint > &data)
 Parse vector data of type 'uint' within an XML tag.
 
static int parse_data_string (const pugi::xml_node &node_data, std::vector< std::string > &data)
static int parse_data_string (const pugi::xml_node &node_data, std::vector< std::string > &data)
 Parse vector data of type 'string' within an XML tag.
 
static int parse_data_vec2 (const pugi::xml_node &node_data, std::vector< vec2 > &data)
static int parse_data_vec2 (const pugi::xml_node &node_data, std::vector< vec2 > &data)
 Parse vector data of type 'vec2' within an XML tag.
 
static int parse_data_vec3 (const pugi::xml_node &node_data, std::vector< vec3 > &data)
static int parse_data_vec3 (const pugi::xml_node &node_data, std::vector< vec3 > &data)
 Parse vector data of type 'vec3' within an XML tag.
 
static int parse_data_vec4 (const pugi::xml_node &node_data, std::vector< vec4 > &data)
static int parse_data_vec4 (const pugi::xml_node &node_data, std::vector< vec4 > &data)
 Parse vector data of type 'vac4' within an XML tag.
 
static int parse_data_int2 (const pugi::xml_node &node_data, std::vector< int2 > &data)
static int parse_data_int2 (const pugi::xml_node &node_data, std::vector< int2 > &data)
 Parse vector data of type 'int2' within an XML tag.
 
static int parse_data_int3 (const pugi::xml_node &node_data, std::vector< int3 > &data)
static int parse_data_int3 (const pugi::xml_node &node_data, std::vector< int3 > &data)
 Parse vector data of type 'int3' within an XML tag.
 
static int parse_data_int4 (const pugi::xml_node &node_data, std::vector< int4 > &data)
static int parse_data_int4 (const pugi::xml_node &node_data, std::vector< int4 > &data)
 Parse vector data of type 'int4' within an XML tag.
 
static int parse_objID (const pugi::xml_node &node_data, uint &objID)
static int parse_objID (const pugi::xml_node &node_data, uint &objID)
 Parse the value within an <objID> (object ID) tag.
 
static int parse_transform (const pugi::xml_node &node_data, float(&transform)[16])
static int parse_transform (const pugi::xml_node &node_data, float(&transform)[16])
 Parse the value within a <transform> (transformation matrix) tag.
 
static int parse_texture (const pugi::xml_node &node_data, std::string &texture)
static int parse_texture (const pugi::xml_node &node_data, std::string &texture)
 Parse the value within an <texture> (path to image texture) tag.
 
static int parse_textureUV (const pugi::xml_node &node_data, std::vector< vec2 > &uvs)
static int parse_textureUV (const pugi::xml_node &node_data, std::vector< vec2 > &uvs)
 Parse the value within a <textureUV> (texture coordinates) tag.
 
static int parse_solid_fraction (const pugi::xml_node &node_data, float &solid_fraction)
static int parse_solid_fraction (const pugi::xml_node &node_data, float &solid_fraction)
 Parse the value within a <solid_fraction> (primitive solid fraction) tag.
 
static int parse_vertices (const pugi::xml_node &node_data, std::vector< float > &vertices)
static int parse_vertices (const pugi::xml_node &node_data, std::vector< float > &vertices)
 Parse the value within a <vertices> (primitive vertex coordinates) tag.
 
static int parse_subdivisions (const pugi::xml_node &node_data, uint &subdivisions)
static int parse_subdivisions (const pugi::xml_node &node_data, uint &subdivisions)
 Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
 
static int parse_subdivisions (const pugi::xml_node &node_data, int2 &subdivisions)
static int parse_subdivisions (const pugi::xml_node &node_data, int2 &subdivisions)
 Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
 
static int parse_subdivisions (const pugi::xml_node &node_data, int3 &subdivisions)
static int parse_subdivisions (const pugi::xml_node &node_data, int3 &subdivisions)
 Parse the value within a <subdivisions> (object sub-primitive resolution) tag.
 
static int parse_nodes (const pugi::xml_node &node_data, std::vector< vec3 > &nodes)
static int parse_nodes (const pugi::xml_node &node_data, std::vector< vec3 > &nodes)
 Parse the value within a <nodes> (coordinates defining nodes of a tube or cone) tag.
 
static int parse_radius (const pugi::xml_node &node_data, std::vector< float > &radius)
static int parse_radius (const pugi::xml_node &node_data, std::vector< float > &radius)
 Parse the value within a <radius> (radius at nodes of a tube or cone) tag.
 
@@ -186,19 +198,12 @@

int XMLparser::parse_data_double ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< double > &  - data  - - - - ) - + std::vector< double > & data ) @@ -234,19 +239,12 @@

int XMLparser::parse_data_float ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< float > &  - data  - - - - ) - + std::vector< float > & data ) @@ -282,19 +280,12 @@

int XMLparser::parse_data_int ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< int > &  - data  - - - - ) - + std::vector< int > & data ) @@ -330,19 +321,12 @@

int XMLparser::parse_data_int2 ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< int2 > &  - data  - - - - ) - + std::vector< int2 > & data ) @@ -378,19 +362,12 @@

int XMLparser::parse_data_int3 ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< int3 > &  - data  - - - - ) - + std::vector< int3 > & data ) @@ -426,19 +403,12 @@

int XMLparser::parse_data_int4 ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< int4 > &  - data  - - - - ) - + std::vector< int4 > & data ) @@ -474,19 +444,12 @@

int XMLparser::parse_data_string ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< std::string > &  - data  - - - - ) - + std::vector< std::string > & data ) @@ -522,19 +485,12 @@

int XMLparser::parse_data_uint ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< uint > &  - data  - - - - ) - + std::vector< uint > & data ) @@ -570,19 +526,12 @@

int XMLparser::parse_data_vec2 ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< vec2 > &  - data  - - - - ) - + std::vector< vec2 > & data ) @@ -618,19 +567,12 @@

int XMLparser::parse_data_vec3 ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< vec3 > &  - data  - - - - ) - + std::vector< vec3 > & data ) @@ -666,19 +608,12 @@

int XMLparser::parse_data_vec4 ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< vec4 > &  - data  - - - - ) - + std::vector< vec4 > & data ) @@ -714,19 +649,12 @@

int XMLparser::parse_nodes ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< vec3 > &  - nodes  - - - - ) - + std::vector< vec3 > & nodes ) @@ -762,19 +690,12 @@

int XMLparser::parse_objID ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - uint &  - objID  - - - - ) - + uint & objID ) @@ -810,19 +731,12 @@

int XMLparser::parse_radius ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< float > &  - radius  - - - - ) - + std::vector< float > & radius ) @@ -858,19 +772,12 @@

int XMLparser::parse_solid_fraction ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - float &  - solid_fraction  - - - - ) - + float & solid_fraction ) @@ -906,19 +813,12 @@

int XMLparser::parse_subdivisions ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - int2 &  - subdivisions  - - - - ) - + int2 & subdivisions ) @@ -954,19 +854,12 @@

int XMLparser::parse_subdivisions ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - int3 &  - subdivisions  - - - - ) - + int3 & subdivisions ) @@ -1002,19 +895,12 @@

int XMLparser::parse_subdivisions ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - uint &  - subdivisions  - - - - ) - + uint & subdivisions ) @@ -1050,19 +936,12 @@

int XMLparser::parse_texture ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::string &  - texture  - - - - ) - + std::string & texture ) @@ -1098,19 +977,12 @@

int XMLparser::parse_textureUV ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< vec2 > &  - uvs  - - - - ) - + std::vector< vec2 > & uvs ) @@ -1146,19 +1018,12 @@

int XMLparser::parse_transform ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - float(&)  - transform[16]  - - - - ) - + float(&) transform[16] ) @@ -1194,19 +1059,12 @@

int XMLparser::parse_vertices ( - const pugi::xml_node &  - node_data, + const pugi::xml_node & node_data, - std::vector< float > &  - vertices  - - - - ) - + std::vector< float > & vertices ) @@ -1237,7 +1095,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+

diff --git a/doc/html/clipboard.js b/doc/html/clipboard.js new file mode 100644 index 000000000..42c1fb0e0 --- /dev/null +++ b/doc/html/clipboard.js @@ -0,0 +1,61 @@ +/** + +The code below is based on the Doxygen Awesome project, see +https://github.com/jothepro/doxygen-awesome-css + +MIT License + +Copyright (c) 2021 - 2022 jothepro + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the "Software"), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in all +copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE +SOFTWARE. + +*/ + +let clipboard_title = "Copy to clipboard" +let clipboard_icon = `` +let clipboard_successIcon = `` +let clipboard_successDuration = 1000 + +$(function() { + if(navigator.clipboard) { + const fragments = document.getElementsByClassName("fragment") + for(const fragment of fragments) { + const clipboard_div = document.createElement("div") + clipboard_div.classList.add("clipboard") + clipboard_div.innerHTML = clipboard_icon + clipboard_div.title = clipboard_title + $(clipboard_div).click(function() { + const content = this.parentNode.cloneNode(true) + // filter out line number and folded fragments from file listings + content.querySelectorAll(".lineno, .ttc, .foldclosed").forEach((node) => { node.remove() }) + let text = content.textContent + // remove trailing newlines and trailing spaces from empty lines + text = text.replace(/^\s*\n/gm,'\n').replace(/\n*$/,'') + navigator.clipboard.writeText(text); + this.classList.add("success") + this.innerHTML = clipboard_successIcon + window.setTimeout(() => { // switch back to normal icon after timeout + this.classList.remove("success") + this.innerHTML = clipboard_icon + }, clipboard_successDuration); + }) + fragment.insertBefore(clipboard_div, fragment.firstChild) + } + } +}) diff --git a/doc/html/context_globaldata.html b/doc/html/context_globaldata.html index 8d1e40b6f..aaa9917ae 100644 --- a/doc/html/context_globaldata.html +++ b/doc/html/context_globaldata.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Tutorial 6: Global Data
+
Tutorial 6: Global Data

@@ -161,7 +173,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/context_primdata.html b/doc/html/context_primdata.html index 2b0750557..1db1cf7e1 100644 --- a/doc/html/context_primdata.html +++ b/doc/html/context_primdata.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Tutorial 5: Primitive Data
+
Tutorial 5: Primitive Data

@@ -208,7 +220,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/context_primitives.html b/doc/html/context_primitives.html index f4bb15b02..66eb2b9fb 100644 --- a/doc/html/context_primitives.html +++ b/doc/html/context_primitives.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Tutorial 2: Working with Context Geometry
+
Tutorial 2: Working with Context Geometry

@@ -168,7 +180,8 @@

-Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
+
diff --git a/doc/html/context_selftest.html b/doc/html/context_selftest.html index a755eee22..148947fba 100644 --- a/doc/html/context_selftest.html +++ b/doc/html/context_selftest.html @@ -38,30 +38,41 @@ Logo -
 v1.3.25 +
 v1.3.26
- + + + +
+
-
Tutorial 0: Context Self-Test Tutorial
+
Tutorial 0: Context Self-Test Tutorial

This tutorial illustrates a very simple example of how to declare the Helios context, and run its self-test function. The self-test function runs through a series of sanity checks to verify that the core system is working properly. This tutorial will illustrate how to:

@@ -102,7 +114,9 @@
  • Build and compile the core Helios library.

    • -C++ Program <br>

    +C++ Program

    +


    +

    We will first write a basic C++ program that uses types included as part of the Helios library. The program is written in the same way any C++ program, and contains a main function. Helios simply provides a group of data types and functions that manages model geometry and data. These types and functions are defined in the header file "Context.h", which must be included in any files that use Helios constructs.

     #include "Context.h"
 
@@ -154,7 +168,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/context_vectors.html b/doc/html/context_vectors.html index 467672371..2c3840cae 100644 --- a/doc/html/context_vectors.html +++ b/doc/html/context_vectors.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    -
    Tutorial 1: Helios Vector Types Tutorial
    +
    Tutorial 1: Helios Vector Types Tutorial

    There are several vector types commonly used in Helios, which are listed in the table below. These are essentially C++ structures, that contain several data elements and functions to operate on that data.

    @@ -230,7 +242,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/cookie.js b/doc/html/cookie.js new file mode 100644 index 000000000..53ad21d98 --- /dev/null +++ b/doc/html/cookie.js @@ -0,0 +1,58 @@ +/*! + Cookie helper functions + Copyright (c) 2023 Dimitri van Heesch + Released under MIT license. +*/ +let Cookie = { + cookie_namespace: 'doxygen_', + + readSetting(cookie,defVal) { + if (window.chrome) { + const val = localStorage.getItem(this.cookie_namespace+cookie) || + sessionStorage.getItem(this.cookie_namespace+cookie); + if (val) return val; + } else { + let myCookie = this.cookie_namespace+cookie+"="; + if (document.cookie) { + const index = document.cookie.indexOf(myCookie); + if (index != -1) { + const valStart = index + myCookie.length; + let valEnd = document.cookie.indexOf(";", valStart); + if (valEnd == -1) { + valEnd = document.cookie.length; + } + return document.cookie.substring(valStart, valEnd); + } + } + } + return defVal; + }, + + writeSetting(cookie,val,days=10*365) { // default days='forever', 0=session cookie, -1=delete + if (window.chrome) { + if (days==0) { + sessionStorage.setItem(this.cookie_namespace+cookie,val); + } else { + localStorage.setItem(this.cookie_namespace+cookie,val); + } + } else { + let date = new Date(); + date.setTime(date.getTime()+(days*24*60*60*1000)); + const expiration = days!=0 ? "expires="+date.toGMTString()+";" : ""; + document.cookie = this.cookie_namespace + cookie + "=" + + val + "; SameSite=Lax;" + expiration + "path=/"; + } + }, + + eraseSetting(cookie) { + if (window.chrome) { + if (localStorage.getItem(this.cookie_namespace+cookie)) { + localStorage.removeItem(this.cookie_namespace+cookie); + } else if (sessionStorage.getItem(this.cookie_namespace+cookie)) { + sessionStorage.removeItem(this.cookie_namespace+cookie); + } + } else { + this.writeSetting(cookie,'',-1); + } + }, +} diff --git a/doc/html/core_2src_2self_test_8cpp.html b/doc/html/core_2src_2self_test_8cpp.html index dcbf7f473..f324ceb0c 100644 --- a/doc/html/core_2src_2self_test_8cpp.html +++ b/doc/html/core_2src_2self_test_8cpp.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    selfTest.cpp File Reference
    @@ -105,7 +117,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/core_2src_2self_test_8cpp_source.html b/doc/html/core_2src_2self_test_8cpp_source.html index 88992e0c6..caa0ceabb 100644 --- a/doc/html/core_2src_2self_test_8cpp_source.html +++ b/doc/html/core_2src_2self_test_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp
    @@ -97,6 +109,7 @@
    17
    18using namespace helios;
    19
    +
    20int Context::selfTest(){
    21
    22 std::cout << "Running Context self-test..." << std::flush;
    @@ -1334,134 +1347,136 @@
    1254 }
    1255
    1256}
    +
    -
    helios::HELIOS_TYPE_DOUBLE
    @ HELIOS_TYPE_DOUBLE
    double data type
    Definition: Context.h:49
    -
    helios::HELIOS_TYPE_FLOAT
    @ HELIOS_TYPE_FLOAT
    floating point data type
    Definition: Context.h:47
    -
    helios::PrimitiveType
    PrimitiveType
    Type of primitive element.
    Definition: Context.h:31
    -
    helios::PRIMITIVE_TYPE_PATCH
    @ PRIMITIVE_TYPE_PATCH
    < Rectangular primitive
    Definition: Context.h:33
    -
    helios::PRIMITIVE_TYPE_TRIANGLE
    @ PRIMITIVE_TYPE_TRIANGLE
    < Triangular primitive
    Definition: Context.h:35
    -
    helios::CompoundObject::rotate
    void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
    Method to rotate a Compound Object about the x-, y-, or z-axis.
    Definition: Context.cpp:2377
    -
    helios::CompoundObject::translate
    void translate(const helios::vec3 &shift)
    Method to translate/shift a Compound Object.
    Definition: Context.cpp:2353
    -
    helios::CompoundObject::getPrimitiveUUIDs
    std::vector< uint > getPrimitiveUUIDs() const
    Get the UUIDs for all primitives contained in the object.
    Definition: Context.cpp:2256
    -
    helios::CompoundObject::getObjectData
    void getObjectData(const char *label, int &data) const
    Get data associated with a object element (integer scalar)
    Definition: Context_data.cpp:3249
    -
    helios::Cone::getNodeCoordinates
    std::vector< helios::vec3 > getNodeCoordinates() const
    Get the Cartesian coordinates of each of the cone object nodes.
    Definition: Context.cpp:4130
    -
    helios::Cone::scaleLength
    void scaleLength(float S)
    Method to scale the length of the cone.
    Definition: Context.cpp:4212
    -
    helios::Cone::scaleGirth
    void scaleGirth(float S)
    Method to scale the girth of the cone.
    Definition: Context.cpp:4261
    -
    helios::Cone::getNodeRadii
    std::vector< float > getNodeRadii() const
    Get the radius at each of the cone object nodes.
    Definition: Context.cpp:4159
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::setTileObjectSubdivisionCount
    void setTileObjectSubdivisionCount(const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
    Change the subdivision count of a tile object.
    Definition: Context.cpp:2982
    -
    helios::Context::getPrimitiveColor
    helios::RGBcolor getPrimitiveColor(uint UUID) const
    Method to return the diffuse color of a Primitive.
    Definition: Context.cpp:7127
    -
    helios::Context::loadXML
    std::vector< uint > loadXML(const char *filename, bool quiet=false)
    Load inputs specified in an XML file.
    Definition: Context_fileIO.cpp:1217
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::getPrimitiveArea
    float getPrimitiveArea(uint UUID) const
    Method to return the surface area of a Primitive.
    Definition: Context.cpp:7053
    -
    helios::Context::loadTabularTimeseriesData
    void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
    Load tabular weather data from text file into timeseries.
    Definition: Context_fileIO.cpp:4552
    -
    helios::Context::getPrimitiveData
    void getPrimitiveData(uint UUID, const char *label, int &data) const
    Get data associated with a primitive element.
    Definition: Context_data.cpp:1001
    -
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition: Context.cpp:1536
    -
    helios::Context::doesObjectDataExist
    bool doesObjectDataExist(uint objID, const char *label) const
    Check if primitive data 'label' exists.
    Definition: Context_data.cpp:2983
    -
    helios::Context::getAllObjectIDs
    std::vector< uint > getAllObjectIDs() const
    Get the IDs for all Compound Objects in the Context.
    Definition: Context.cpp:2589
    -
    helios::Context::getConeObjectPointer
    Cone * getConeObjectPointer(uint ObjID) const
    Get a pointer to a Cone Compound Object.
    Definition: Context.cpp:4123
    -
    helios::Context::getObjectData
    void getObjectData(uint objID, const char *label, int &data) const
    Get data associated with a compound object.
    Definition: Context_data.cpp:2815
    -
    helios::Context::getObjectPointer
    CompoundObject * getObjectPointer(uint ObjID) const
    Get a pointer to a Compound Object.
    Definition: Context.cpp:2574
    -
    helios::Context::getPatchCenter
    helios::vec3 getPatchCenter(uint UUID) const
    Get the Cartesian (x,y,z) center position of a patch element.
    Definition: Context.cpp:1693
    -
    helios::Context::filterPrimitivesByData
    std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
    Filter a set of primitives based on their primitive data and a condition and float value.
    Definition: Context_data.cpp:2299
    -
    helios::Context::calculatePrimitiveDataSum
    void calculatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
    Calculate sum of primitive data values (float) for a subset of primitives.
    Definition: Context_data.cpp:1562
    -
    helios::Context::getPrimitiveTextureFile
    std::string getPrimitiveTextureFile(uint UUID) const
    Get the path to texture map file for primitive. If primitive does not have a texture map,...
    Definition: Context.cpp:7159
    -
    helios::Context::getObjectCount
    uint getObjectCount() const
    Get the total number of objects that have been created in the Context.
    Definition: Context.cpp:2581
    -
    helios::Context::getPrimitiveTextureUV
    std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
    Get u-v texture coordinates at primitive vertices.
    Definition: Context.cpp:7175
    -
    helios::Context::setDate
    void setDate(int day, int month, int year)
    Set simulation date by day, month, year.
    Definition: Context.cpp:1059
    -
    helios::Context::setPrimitiveParentObjectID
    void setPrimitiveParentObjectID(uint UUID, uint objID)
    Method to set the ID of the parent object the primitive belongs to (default is object 0)
    Definition: Context.cpp:6988
    -
    helios::Context::doesGlobalDataExist
    bool doesGlobalDataExist(const char *label) const
    Check if global data 'label' exists.
    Definition: Context_data.cpp:4533
    -
    helios::Context::getPrimitiveType
    PrimitiveType getPrimitiveType(uint UUID) const
    Method to get the Primitive type.
    Definition: Context.cpp:6984
    -
    helios::Context::setObjectData
    void setObjectData(uint objID, const char *label, const int &data)
    Add data value (int) associated with a compound object.
    Definition: Context_data.cpp:2467
    -
    helios::Context::getPrimitiveSolidFraction
    float getPrimitiveSolidFraction(uint UUID) const
    Get fraction of primitive surface area that is non-transparent.
    Definition: Context.cpp:7221
    -
    helios::Context::doesPrimitiveDataExist
    bool doesPrimitiveDataExist(uint UUID, const char *label) const
    Check if primitive data 'label' exists.
    Definition: Context_data.cpp:1169
    -
    helios::Context::getObjectPrimitiveUUIDs
    std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
    Get primitive UUIDs associated with compound object (single object ID input)
    Definition: Context.cpp:2907
    -
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition: Context.cpp:1578
    -
    helios::Context::loadOBJ
    std::vector< uint > loadOBJ(const char *filename, bool silent=false)
    Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
    Definition: Context_fileIO.cpp:3742
    -
    helios::Context::calculatePrimitiveDataMean
    void calculatePrimitiveDataMean(const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
    Calculate mean of primitive data values (float) for a subset of primitives.
    Definition: Context_data.cpp:1304
    -
    helios::Context::getGlobalData
    void getGlobalData(const char *label, int &data) const
    Get global data value (scalar integer)
    Definition: Context_data.cpp:4128
    -
    helios::Context::getAllUUIDs
    std::vector< uint > getAllUUIDs() const
    Get all primitive UUIDs currently in the Context.
    Definition: Context.cpp:1763
    -
    helios::Context::getTileObjectAreaRatio
    float getTileObjectAreaRatio(uint ObjectID) const
    Get the area ratio of a tile object (total object area / sub-patch area)
    Definition: Context.cpp:2944
    -
    helios::Context::setGlobalData
    void setGlobalData(const char *label, const int &data)
    Add global data value (int)
    Definition: Context_data.cpp:3844
    -
    helios::Context::scalePrimitive
    void scalePrimitive(uint UUID, const helios::vec3 &S)
    Scale a primitive using its UUID relative to the origin (0,0,0)
    Definition: Context.cpp:1491
    -
    helios::Context::getPatchSize
    helios::vec2 getPatchSize(uint UUID) const
    Get the size of a patch element.
    Definition: Context.cpp:1684
    -
    helios::Context::getPrimitiveBoundingBox
    void getPrimitiveBoundingBox(uint UUID, vec3 &min_corner, vec3 &max_corner) const
    Get the axis-aligned bounding box for a single primitive.
    Definition: Context.cpp:7057
    -
    helios::Context::writeXML
    void writeXML(const char *filename, bool quiet=false) const
    Write Context geometry and data to XML file for all UUIDs in the context.
    Definition: Context_fileIO.cpp:2658
    -
    helios::Context::getPrimitiveNormal
    helios::vec3 getPrimitiveNormal(uint UUID) const
    Method to return the normal vector of a Primitive.
    Definition: Context.cpp:7104
    -
    helios::Context::setPrimitiveData
    void setPrimitiveData(const uint &UUID, const char *label, const int &data)
    Add data value (int) associated with a primitive element.
    Definition: Context_data.cpp:655
    -
    helios::Context::calculatePrimitiveDataAreaWeightedMean
    void calculatePrimitiveDataAreaWeightedMean(const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
    Calculate mean of primitive data values (float) for a subset of primitives, where each value in the m...
    Definition: Context_data.cpp:1413
    -
    helios::Context::doesPrimitiveExist
    bool doesPrimitiveExist(uint UUID) const
    Check if primitive exists for a given UUID.
    Definition: Context.cpp:1659
    -
    helios::Context::getTileObjectPointer
    Tile * getTileObjectPointer(uint ObjID) const
    Get a pointer to a Tile Compound Object.
    Definition: Context.cpp:3312
    -
    helios::Context::getBoxObjectVolume
    float getBoxObjectVolume(uint ObjID) const
    get the volume of a Box object from the context
    Definition: Context.cpp:8234
    -
    helios::Context::setTime
    void setTime(int minute, int hour)
    Set simulation time.
    Definition: Context.cpp:1136
    -
    helios::Context::getPrimitiveVertices
    std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
    Method to return the (x,y,z) coordinates of the vertices of a Primitive.
    Definition: Context.cpp:7122
    -
    helios::Context::selfTest
    static int selfTest()
    Run a self-test of the Context. The Context self-test runs through validation checks of Context-relat...
    Definition: selfTest.cpp:20
    -
    helios::getFileExtension
    std::string getFileExtension(const std::string &filepath)
    Parse a file string to get the extension.
    Definition: global.cpp:3075
    -
    helios::getFileName
    std::string getFileName(const std::string &filepath)
    Parse a file string to get the filename including extension.
    Definition: global.cpp:3085
    -
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition: global.cpp:1350
    -
    helios::getFileStem
    std::string getFileStem(const std::string &filepath)
    Parse a file string to get the filename without extension.
    Definition: global.cpp:3080
    -
    helios::getFilePath
    std::string getFilePath(const std::string &filepath, bool trailingslash=true)
    Parse a file string to get the path (i.e., portion of the string before the file name).
    Definition: global.cpp:3090
    -
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition: global.cpp:57
    -
    helios::Context::addDiskObject
    uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
    Add new Disk geometric primitive to the Context given its center, and size.
    Definition: Context.cpp:5256
    -
    helios::Context::addTubeObject
    uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition: Context.cpp:4728
    -
    helios::Context::addConeObject
    uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
    Add a 3D cone compound object to the Context.
    Definition: Context.cpp:5426
    -
    helios::Context::addBoxObject
    uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
    Add a rectangular prism tessellated with Patch primitives.
    Definition: Context.cpp:5000
    -
    helios::Context::addTileObject
    uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition: Context.cpp:4550
    -
    helios::Context::addSphereObject
    uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
    Add a spherical compound object to the Context.
    Definition: Context.cpp:4310
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition: global.cpp:2768
    -
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition: global.cpp:617
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition: Context.cpp:1328
    -
    helios::Context::getPrimitiveCount
    uint getPrimitiveCount() const
    Get the total number of Primitives in the Context.
    Definition: Context.cpp:1759
    -
    helios::Context::addPatch
    uint addPatch()
    Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
    Definition: Context.cpp:1212
    -
    helios::Context::setCurrentTimeseriesPoint
    void setCurrentTimeseriesPoint(const char *label, uint index)
    Set the Context date and time by providing the index of a timeseries data point.
    Definition: Context.cpp:1886
    -
    helios::Context::queryTimeseriesTime
    Time queryTimeseriesTime(const char *label, uint index) const
    Get the time associated with a timeseries data point.
    Definition: Context.cpp:1958
    -
    helios::Context::getTimeseriesLength
    uint getTimeseriesLength(const char *label) const
    Get the length of timeseries data.
    Definition: Context.cpp:2014
    -
    helios::Context::queryTimeseriesData
    float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
    Get a timeseries data point by specifying a date and time vector.
    Definition: Context.cpp:1894
    -
    helios::Context::addTimeseriesData
    void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
    Add a data point to timeseries of data.
    Definition: Context.cpp:1823
    -
    helios::Context::queryTimeseriesDate
    Date queryTimeseriesDate(const char *label, uint index) const
    Get the date associated with a timeseries data point.
    Definition: Context.cpp:1994
    -
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition: helios_vector_types.h:99
    -
    helios::make_Time
    Time make_Time(int hour, int minute)
    Make a Time vector.
    Definition: helios_vector_types.h:1427
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition: helios_vector_types.h:1241
    -
    helios::Julian2Calendar
    Date Julian2Calendar(int JulianDay, int year)
    Convert a Julian day to a calendar Date vector.
    Definition: helios_vector_types.h:1268
    -
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition: helios_vector_types.h:198
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition: helios_vector_types.h:599
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    - -
    helios::Date::month
    int month
    Month of year.
    Definition: helios_vector_types.h:1174
    -
    helios::Date::day
    int day
    Day of month.
    Definition: helios_vector_types.h:1172
    -
    helios::Date::year
    int year
    Year in YYYY format.
    Definition: helios_vector_types.h:1176
    -
    helios::RGBcolor
    R-G-B color vector.
    Definition: helios_vector_types.h:844
    -
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition: helios_vector_types.h:855
    -
    helios::RGBcolor::r
    float r
    Red color component.
    Definition: helios_vector_types.h:849
    -
    helios::RGBcolor::g
    float g
    Green color component.
    Definition: helios_vector_types.h:852
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    - -
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition: helios_vector_types.h:1553
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    - -
    helios::Time::second
    int second
    Second of minute.
    Definition: helios_vector_types.h:1355
    -
    helios::Time::hour
    int hour
    Hour of day.
    Definition: helios_vector_types.h:1359
    -
    helios::Time::minute
    int minute
    Minute of hour.
    Definition: helios_vector_types.h:1357
    -
    helios::int2
    Vector of two elements of type 'int'.
    Definition: helios_vector_types.h:44
    -
    helios::int3
    Vector of three elements of type 'int'.
    Definition: helios_vector_types.h:146
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec2::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:350
    -
    helios::vec2::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:352
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:511
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    -
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition: helios_vector_types.h:526
    +
    helios::HELIOS_TYPE_DOUBLE
    @ HELIOS_TYPE_DOUBLE
    double data type
    Definition Context.h:49
    +
    helios::HELIOS_TYPE_FLOAT
    @ HELIOS_TYPE_FLOAT
    floating point data type
    Definition Context.h:47
    +
    helios::PrimitiveType
    PrimitiveType
    Type of primitive element.
    Definition Context.h:31
    +
    helios::PRIMITIVE_TYPE_PATCH
    @ PRIMITIVE_TYPE_PATCH
    < Rectangular primitive
    Definition Context.h:33
    +
    helios::PRIMITIVE_TYPE_TRIANGLE
    @ PRIMITIVE_TYPE_TRIANGLE
    < Triangular primitive
    Definition Context.h:35
    +
    helios::CompoundObject::rotate
    void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
    Method to rotate a Compound Object about the x-, y-, or z-axis.
    Definition Context.cpp:2377
    +
    helios::CompoundObject::translate
    void translate(const helios::vec3 &shift)
    Method to translate/shift a Compound Object.
    Definition Context.cpp:2353
    +
    helios::CompoundObject::getPrimitiveUUIDs
    std::vector< uint > getPrimitiveUUIDs() const
    Get the UUIDs for all primitives contained in the object.
    Definition Context.cpp:2256
    +
    helios::CompoundObject::getObjectData
    void getObjectData(const char *label, int &data) const
    Get data associated with a object element (integer scalar)
    Definition Context_data.cpp:3249
    +
    helios::Cone::getNodeCoordinates
    std::vector< helios::vec3 > getNodeCoordinates() const
    Get the Cartesian coordinates of each of the cone object nodes.
    Definition Context.cpp:4130
    +
    helios::Cone::scaleLength
    void scaleLength(float S)
    Method to scale the length of the cone.
    Definition Context.cpp:4212
    +
    helios::Cone::scaleGirth
    void scaleGirth(float S)
    Method to scale the girth of the cone.
    Definition Context.cpp:4261
    +
    helios::Cone::getNodeRadii
    std::vector< float > getNodeRadii() const
    Get the radius at each of the cone object nodes.
    Definition Context.cpp:4159
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::setTileObjectSubdivisionCount
    void setTileObjectSubdivisionCount(const std::vector< uint > &ObjectIDs, const int2 &new_subdiv)
    Change the subdivision count of a tile object.
    Definition Context.cpp:2982
    +
    helios::Context::getPrimitiveColor
    helios::RGBcolor getPrimitiveColor(uint UUID) const
    Method to return the diffuse color of a Primitive.
    Definition Context.cpp:7127
    +
    helios::Context::loadXML
    std::vector< uint > loadXML(const char *filename, bool quiet=false)
    Load inputs specified in an XML file.
    Definition Context_fileIO.cpp:1217
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::getPrimitiveArea
    float getPrimitiveArea(uint UUID) const
    Method to return the surface area of a Primitive.
    Definition Context.cpp:7053
    +
    helios::Context::loadTabularTimeseriesData
    void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
    Load tabular weather data from text file into timeseries.
    Definition Context_fileIO.cpp:4552
    +
    helios::Context::getPrimitiveData
    void getPrimitiveData(uint UUID, const char *label, int &data) const
    Get data associated with a primitive element.
    Definition Context_data.cpp:1001
    +
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition Context.cpp:1536
    +
    helios::Context::doesObjectDataExist
    bool doesObjectDataExist(uint objID, const char *label) const
    Check if primitive data 'label' exists.
    Definition Context_data.cpp:2983
    +
    helios::Context::getAllObjectIDs
    std::vector< uint > getAllObjectIDs() const
    Get the IDs for all Compound Objects in the Context.
    Definition Context.cpp:2589
    +
    helios::Context::getConeObjectPointer
    Cone * getConeObjectPointer(uint ObjID) const
    Get a pointer to a Cone Compound Object.
    Definition Context.cpp:4123
    +
    helios::Context::getObjectData
    void getObjectData(uint objID, const char *label, int &data) const
    Get data associated with a compound object.
    Definition Context_data.cpp:2815
    +
    helios::Context::getObjectPointer
    CompoundObject * getObjectPointer(uint ObjID) const
    Get a pointer to a Compound Object.
    Definition Context.cpp:2574
    +
    helios::Context::getPatchCenter
    helios::vec3 getPatchCenter(uint UUID) const
    Get the Cartesian (x,y,z) center position of a patch element.
    Definition Context.cpp:1693
    +
    helios::Context::filterPrimitivesByData
    std::vector< uint > filterPrimitivesByData(const std::vector< uint > &UUIDs, const std::string &primitive_data_label, float filter_value, const std::string &comparator)
    Filter a set of primitives based on their primitive data and a condition and float value.
    Definition Context_data.cpp:2299
    +
    helios::Context::calculatePrimitiveDataSum
    void calculatePrimitiveDataSum(const std::vector< uint > &UUIDs, const std::string &label, float &sum) const
    Calculate sum of primitive data values (float) for a subset of primitives.
    Definition Context_data.cpp:1562
    +
    helios::Context::getPrimitiveTextureFile
    std::string getPrimitiveTextureFile(uint UUID) const
    Get the path to texture map file for primitive. If primitive does not have a texture map,...
    Definition Context.cpp:7159
    +
    helios::Context::getObjectCount
    uint getObjectCount() const
    Get the total number of objects that have been created in the Context.
    Definition Context.cpp:2581
    +
    helios::Context::getPrimitiveTextureUV
    std::vector< vec2 > getPrimitiveTextureUV(uint UUID) const
    Get u-v texture coordinates at primitive vertices.
    Definition Context.cpp:7175
    +
    helios::Context::setDate
    void setDate(int day, int month, int year)
    Set simulation date by day, month, year.
    Definition Context.cpp:1059
    +
    helios::Context::setPrimitiveParentObjectID
    void setPrimitiveParentObjectID(uint UUID, uint objID)
    Method to set the ID of the parent object the primitive belongs to (default is object 0)
    Definition Context.cpp:6988
    +
    helios::Context::doesGlobalDataExist
    bool doesGlobalDataExist(const char *label) const
    Check if global data 'label' exists.
    Definition Context_data.cpp:4533
    +
    helios::Context::getPrimitiveType
    PrimitiveType getPrimitiveType(uint UUID) const
    Method to get the Primitive type.
    Definition Context.cpp:6984
    +
    helios::Context::setObjectData
    void setObjectData(uint objID, const char *label, const int &data)
    Add data value (int) associated with a compound object.
    Definition Context_data.cpp:2467
    +
    helios::Context::getPrimitiveSolidFraction
    float getPrimitiveSolidFraction(uint UUID) const
    Get fraction of primitive surface area that is non-transparent.
    Definition Context.cpp:7221
    +
    helios::Context::doesPrimitiveDataExist
    bool doesPrimitiveDataExist(uint UUID, const char *label) const
    Check if primitive data 'label' exists.
    Definition Context_data.cpp:1169
    +
    helios::Context::getObjectPrimitiveUUIDs
    std::vector< uint > getObjectPrimitiveUUIDs(uint ObjID) const
    Get primitive UUIDs associated with compound object (single object ID input)
    Definition Context.cpp:2907
    +
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition Context.cpp:1578
    +
    helios::Context::loadOBJ
    std::vector< uint > loadOBJ(const char *filename, bool silent=false)
    Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
    Definition Context_fileIO.cpp:3742
    +
    helios::Context::calculatePrimitiveDataMean
    void calculatePrimitiveDataMean(const std::vector< uint > &UUIDs, const std::string &label, float &mean) const
    Calculate mean of primitive data values (float) for a subset of primitives.
    Definition Context_data.cpp:1304
    +
    helios::Context::getGlobalData
    void getGlobalData(const char *label, int &data) const
    Get global data value (scalar integer)
    Definition Context_data.cpp:4128
    +
    helios::Context::getAllUUIDs
    std::vector< uint > getAllUUIDs() const
    Get all primitive UUIDs currently in the Context.
    Definition Context.cpp:1763
    +
    helios::Context::getTileObjectAreaRatio
    float getTileObjectAreaRatio(uint ObjectID) const
    Get the area ratio of a tile object (total object area / sub-patch area)
    Definition Context.cpp:2944
    +
    helios::Context::setGlobalData
    void setGlobalData(const char *label, const int &data)
    Add global data value (int)
    Definition Context_data.cpp:3844
    +
    helios::Context::scalePrimitive
    void scalePrimitive(uint UUID, const helios::vec3 &S)
    Scale a primitive using its UUID relative to the origin (0,0,0)
    Definition Context.cpp:1491
    +
    helios::Context::getPatchSize
    helios::vec2 getPatchSize(uint UUID) const
    Get the size of a patch element.
    Definition Context.cpp:1684
    +
    helios::Context::getPrimitiveBoundingBox
    void getPrimitiveBoundingBox(uint UUID, vec3 &min_corner, vec3 &max_corner) const
    Get the axis-aligned bounding box for a single primitive.
    Definition Context.cpp:7057
    +
    helios::Context::writeXML
    void writeXML(const char *filename, bool quiet=false) const
    Write Context geometry and data to XML file for all UUIDs in the context.
    Definition Context_fileIO.cpp:2658
    +
    helios::Context::getPrimitiveNormal
    helios::vec3 getPrimitiveNormal(uint UUID) const
    Method to return the normal vector of a Primitive.
    Definition Context.cpp:7104
    +
    helios::Context::setPrimitiveData
    void setPrimitiveData(const uint &UUID, const char *label, const int &data)
    Add data value (int) associated with a primitive element.
    Definition Context_data.cpp:655
    +
    helios::Context::calculatePrimitiveDataAreaWeightedMean
    void calculatePrimitiveDataAreaWeightedMean(const std::vector< uint > &UUIDs, const std::string &label, float &awt_mean) const
    Calculate mean of primitive data values (float) for a subset of primitives, where each value in the m...
    Definition Context_data.cpp:1413
    +
    helios::Context::doesPrimitiveExist
    bool doesPrimitiveExist(uint UUID) const
    Check if primitive exists for a given UUID.
    Definition Context.cpp:1659
    +
    helios::Context::getTileObjectPointer
    Tile * getTileObjectPointer(uint ObjID) const
    Get a pointer to a Tile Compound Object.
    Definition Context.cpp:3312
    +
    helios::Context::getBoxObjectVolume
    float getBoxObjectVolume(uint ObjID) const
    get the volume of a Box object from the context
    Definition Context.cpp:8234
    +
    helios::Context::setTime
    void setTime(int minute, int hour)
    Set simulation time.
    Definition Context.cpp:1136
    +
    helios::Context::getPrimitiveVertices
    std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
    Method to return the (x,y,z) coordinates of the vertices of a Primitive.
    Definition Context.cpp:7122
    +
    helios::Context::selfTest
    static int selfTest()
    Run a self-test of the Context. The Context self-test runs through validation checks of Context-relat...
    Definition selfTest.cpp:20
    +
    helios::getFileExtension
    std::string getFileExtension(const std::string &filepath)
    Parse a file string to get the extension.
    Definition global.cpp:3075
    +
    helios::getFileName
    std::string getFileName(const std::string &filepath)
    Parse a file string to get the filename including extension.
    Definition global.cpp:3085
    +
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition global.cpp:1350
    +
    helios::getFileStem
    std::string getFileStem(const std::string &filepath)
    Parse a file string to get the filename without extension.
    Definition global.cpp:3080
    +
    helios::getFilePath
    std::string getFilePath(const std::string &filepath, bool trailingslash=true)
    Parse a file string to get the path (i.e., portion of the string before the file name).
    Definition global.cpp:3090
    +
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition global.cpp:57
    +
    helios::Context::addDiskObject
    uint addDiskObject(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
    Add new Disk geometric primitive to the Context given its center, and size.
    Definition Context.cpp:5256
    +
    helios::Context::addTubeObject
    uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition Context.cpp:4728
    +
    helios::Context::addConeObject
    uint addConeObject(uint Ndivs, const vec3 &node0, const vec3 &node1, float radius0, float radius1)
    Add a 3D cone compound object to the Context.
    Definition Context.cpp:5426
    +
    helios::Context::addBoxObject
    uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
    Add a rectangular prism tessellated with Patch primitives.
    Definition Context.cpp:5000
    +
    helios::Context::addTileObject
    uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition Context.cpp:4550
    +
    helios::Context::addSphereObject
    uint addSphereObject(uint Ndivs, const vec3 &center, float radius)
    Add a spherical compound object to the Context.
    Definition Context.cpp:4310
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition global.cpp:2768
    +
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition global.cpp:617
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition Context.cpp:1328
    +
    helios::Context::getPrimitiveCount
    uint getPrimitiveCount() const
    Get the total number of Primitives in the Context.
    Definition Context.cpp:1759
    +
    helios::Context::addPatch
    uint addPatch()
    Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
    Definition Context.cpp:1212
    +
    helios::Context::setCurrentTimeseriesPoint
    void setCurrentTimeseriesPoint(const char *label, uint index)
    Set the Context date and time by providing the index of a timeseries data point.
    Definition Context.cpp:1886
    +
    helios::Context::queryTimeseriesTime
    Time queryTimeseriesTime(const char *label, uint index) const
    Get the time associated with a timeseries data point.
    Definition Context.cpp:1958
    +
    helios::Context::getTimeseriesLength
    uint getTimeseriesLength(const char *label) const
    Get the length of timeseries data.
    Definition Context.cpp:2014
    +
    helios::Context::queryTimeseriesData
    float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
    Get a timeseries data point by specifying a date and time vector.
    Definition Context.cpp:1894
    +
    helios::Context::addTimeseriesData
    void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
    Add a data point to timeseries of data.
    Definition Context.cpp:1823
    +
    helios::Context::queryTimeseriesDate
    Date queryTimeseriesDate(const char *label, uint index) const
    Get the date associated with a timeseries data point.
    Definition Context.cpp:1994
    +
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition helios_vector_types.h:99
    +
    helios::make_Time
    Time make_Time(int hour, int minute)
    Make a Time vector.
    Definition helios_vector_types.h:1427
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition helios_vector_types.h:1241
    +
    helios::Julian2Calendar
    Date Julian2Calendar(int JulianDay, int year)
    Convert a Julian day to a calendar Date vector.
    Definition helios_vector_types.h:1268
    +
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition helios_vector_types.h:198
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition helios_vector_types.h:599
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    + +
    helios::Date::month
    int month
    Month of year.
    Definition helios_vector_types.h:1174
    +
    helios::Date::day
    int day
    Day of month.
    Definition helios_vector_types.h:1172
    +
    helios::Date::year
    int year
    Year in YYYY format.
    Definition helios_vector_types.h:1176
    +
    helios::RGBcolor
    R-G-B color vector.
    Definition helios_vector_types.h:844
    +
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition helios_vector_types.h:855
    +
    helios::RGBcolor::r
    float r
    Red color component.
    Definition helios_vector_types.h:849
    +
    helios::RGBcolor::g
    float g
    Green color component.
    Definition helios_vector_types.h:852
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    + +
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition helios_vector_types.h:1553
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    + +
    helios::Time::second
    int second
    Second of minute.
    Definition helios_vector_types.h:1355
    +
    helios::Time::hour
    int hour
    Hour of day.
    Definition helios_vector_types.h:1359
    +
    helios::Time::minute
    int minute
    Minute of hour.
    Definition helios_vector_types.h:1357
    +
    helios::int2
    Vector of two elements of type 'int'.
    Definition helios_vector_types.h:44
    +
    helios::int3
    Vector of three elements of type 'int'.
    Definition helios_vector_types.h:146
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec2::x
    float x
    First element in vector.
    Definition helios_vector_types.h:350
    +
    helios::vec2::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:352
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
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    helios::vec3::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:511
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    +
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition helios_vector_types.h:526
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Mono',monospace,fixed; font-size: 13px; min-height: 13px; - line-height: 1.0; + line-height: 1.2; text-wrap: unrestricted; white-space: -moz-pre-wrap; /* Moz */ white-space: -pre-wrap; /* Opera 4-6 */ @@ -347,6 +407,18 @@ div.line.glow { box-shadow: 0 0 10px cyan; } +span.fold { + margin-left: 5px; + margin-right: 1px; + margin-top: 0px; + margin-bottom: 0px; + padding: 0px; + display: inline-block; + width: 12px; + height: 12px; + background-repeat:no-repeat; + background-position:center; +} span.lineno { padding-right: 4px; @@ -418,10 +490,6 @@ img.light-mode-visible { display: none; } -img.formulaDsp { - -} - img.formulaInl, img.inline { vertical-align: middle; } @@ -484,6 +552,10 @@ span.charliteral { color: #008080; } +span.xmlcdata { + color: black; +} + span.vhdldigit { color: #FF00FF; } @@ -675,7 +747,7 @@ table.memberdecls { } .overload { - font-family: monospace,fixed; + font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed; font-size: 65%; } @@ -717,17 +789,25 @@ dl.reflist dd { .paramtype { white-space: nowrap; + padding: 0px; + padding-bottom: 1px; } .paramname { - color: #602020; white-space: nowrap; + padding: 0px; + padding-bottom: 1px; + margin-left: 2px; } + .paramname em { + color: #602020; font-style: normal; + margin-right: 1px; } -.paramname code { - line-height: 14px; + +.paramname .paramdefval { + font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed; } .params, .retval, .exception, .tparams { @@ -746,7 +826,7 @@ dl.reflist dd { } .params .paramdir, .tparams .paramdir { - font-family: monospace,fixed; + font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed; vertical-align: top; } @@ -898,8 +978,7 @@ div.directory { width: 24px; height: 18px; margin-bottom: 4px; - background-image:url('folderopen.png'); - background-position: 0px -4px; + background-image:url('folderopen.svg'); background-repeat: repeat-y; vertical-align:top; display: inline-block; @@ -909,8 +988,7 @@ div.directory { width: 24px; height: 18px; margin-bottom: 4px; - background-image:url('folderclosed.png'); - background-position: 0px -4px; + background-image:url('folderclosed.svg'); background-repeat: repeat-y; vertical-align:top; display: inline-block; @@ -920,7 +998,7 @@ div.directory { width: 24px; height: 18px; margin-bottom: 4px; - background-image:url('doc.png'); + background-image:url('doc.svg'); background-position: 0px -4px; background-repeat: repeat-y; vertical-align:top; @@ -979,7 +1057,7 @@ table.fieldtable { padding: 3px 7px 2px; } -.fieldtable td.fieldtype, .fieldtable td.fieldname { +.fieldtable td.fieldtype, .fieldtable td.fieldname, .fieldtable td.fieldinit { white-space: nowrap; border-right: 1px solid #A8B8D9; border-bottom: 1px solid #A8B8D9; @@ -990,6 +1068,12 @@ table.fieldtable { padding-top: 3px; } +.fieldtable td.fieldinit { + padding-top: 3px; + text-align: right; +} + + .fieldtable td.fielddoc { border-bottom: 1px solid #A8B8D9; } @@ -1063,7 +1147,6 @@ table.fieldtable { { height:32px; display:block; - text-decoration: none; outline: none; color: #283A5D; font-family: 'Lucida Grande',Geneva,Helvetica,Arial,sans-serif; @@ -1152,7 +1235,8 @@ dl { padding: 0 0 0 0; } -/* dl.note, dl.warning, dl.attention, dl.pre, dl.post, dl.invariant, dl.deprecated, dl.todo, dl.test, dl.bug, dl.examples */ +/* + dl.section { margin-left: 0px; padding-left: 0px; @@ -1165,7 +1249,7 @@ dl.note { border-color: #D0C000; } -dl.warning, dl.attention { +dl.warning, dl.attention, dl.important { margin-left: -7px; padding-left: 3px; border-left: 4px solid; @@ -1207,8 +1291,103 @@ dl.bug { border-color: #C08050; } +*/ + +dl.bug dt a, dl.deprecated dt a, dl.todo dt a, dl.test a { + font-weight: bold !important; +} + +dl.warning, dl.attention, dl.important, dl.note, dl.deprecated, dl.bug, +dl.invariant, dl.pre, dl.post, dl.todo, dl.test, dl.remark { + padding: 10px; + margin: 10px 0px; + overflow: hidden; + margin-left: 0; + border-radius: 4px; +} + dl.section dd { - margin-bottom: 6px; + margin-bottom: 2px; +} + +dl.warning, dl.attention, dl.important { + background: #f8d1cc; + border-left: 8px solid #b61825; + color: #75070f; +} + +dl.warning dt, dl.attention dt, dl.important dt { + color: #b61825; +} + +dl.note, dl.remark { + background: #faf3d8; + border-left: 8px solid #f3a600; + color: #5f4204; +} + +dl.note dt, dl.remark dt { + color: #f3a600; +} + +dl.todo { + background: #e4f3ff; + border-left: 8px solid #1879C4; + color: #274a5c; +} + +dl.todo dt { + color: #1879C4; +} + +dl.test { + background: #e8e8ff; + border-left: 8px solid #3939C4; + color: #1a1a5c; +} + +dl.test dt { + color: #3939C4; +} + +dl.bug dt a { + color: #5b2bdd !important; +} + +dl.bug { + background: #e4dafd; + border-left: 8px solid #5b2bdd; + color: #2a0d72; +} + +dl.bug dt a { + color: #5b2bdd !important; +} + +dl.deprecated { + background: #ecf0f3; + border-left: 8px solid #5b6269; + color: #43454a; +} + +dl.deprecated dt a { + color: #5b6269 !important; +} + +dl.note dd, dl.warning dd, dl.pre dd, dl.post dd, +dl.remark dd, dl.attention dd, dl.important dd, dl.invariant dd, +dl.bug dd, dl.deprecated dd, dl.todo dd, dl.test dd { + margin-inline-start: 0px; +} + +dl.invariant, dl.pre, dl.post { + background: #d8f1e3; + border-left: 8px solid #44b86f; + color: #265532; +} + +dl.invariant dt, dl.pre dt, dl.post dt { + color: #44b86f; } @@ -1223,12 +1402,12 @@ dl.section dd { vertical-align: bottom; border-collapse: separate; } - + #projectlogo img -{ +{ border: 0px none; } - + #projectalign { vertical-align: middle; @@ -1329,7 +1508,7 @@ div.toc { } div.toc li { - background: url("bdwn.png") no-repeat scroll 0 5px transparent; + background: url("data:image/svg+xml;utf8,&%238595;") no-repeat scroll 0 5px transparent; font: 10px/1.2 Verdana,'DejaVu Sans',Geneva,sans-serif; margin-top: 5px; padding-left: 10px; @@ -1349,20 +1528,17 @@ div.toc ul { padding: 0px; } -div.toc li.level1 { - margin-left: 0px; -} - -div.toc li.level2 { +div.toc li[class^='level'] { margin-left: 15px; } -div.toc li.level3 { - margin-left: 30px; +div.toc li.level1 { + margin-left: 0px; } -div.toc li.level4 { - margin-left: 45px; +div.toc li.empty { + background-image: none; + margin-top: 0px; } span.emoji { diff --git a/doc/html/doxygen.svg b/doc/html/doxygen.svg index d42dad52d..79a763540 100644 --- a/doc/html/doxygen.svg +++ b/doc/html/doxygen.svg @@ -1,4 +1,6 @@ + @@ -17,7 +19,7 @@ - + diff --git a/doc/html/doxygen_crawl.html b/doc/html/doxygen_crawl.html new file mode 100644 index 000000000..168a9e3d3 --- /dev/null +++ b/doc/html/doxygen_crawl.html @@ -0,0 +1,3525 @@ + + + +Validator / crawler helper + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 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+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/doc/html/dynsections.js b/doc/html/dynsections.js index 1f4cd14a6..0c3560522 100644 --- a/doc/html/dynsections.js +++ b/doc/html/dynsections.js @@ -22,106 +22,181 @@ @licend The above is the entire license notice for the JavaScript code in this file */ -function toggleVisibility(linkObj) -{ - var base = $(linkObj).attr('id'); - var summary = $('#'+base+'-summary'); - var content = $('#'+base+'-content'); - var trigger = $('#'+base+'-trigger'); - var src=$(trigger).attr('src'); - if (content.is(':visible')===true) { - content.hide(); - summary.show(); - $(linkObj).addClass('closed').removeClass('opened'); - $(trigger).attr('src',src.substring(0,src.length-8)+'closed.png'); - } else { - content.show(); - summary.hide(); - $(linkObj).removeClass('closed').addClass('opened'); - $(trigger).attr('src',src.substring(0,src.length-10)+'open.png'); - } - return false; -} -function updateStripes() -{ - $('table.directory tr'). - removeClass('even').filter(':visible:even').addClass('even'); - $('table.directory tr'). - removeClass('odd').filter(':visible:odd').addClass('odd'); +function toggleVisibility(linkObj) { + return dynsection.toggleVisibility(linkObj); } -function toggleLevel(level) -{ - $('table.directory tr').each(function() { - var l = this.id.split('_').length-1; - var i = $('#img'+this.id.substring(3)); - var a = $('#arr'+this.id.substring(3)); - if (l    '); + // add vertical lines to other rows + $('span[class=lineno]').not(':eq(0)').append(''); + // add toggle controls to lines with fold divs + $('div[class=foldopen]').each(function() { + // extract specific id to use + const id = $(this).attr('id').replace('foldopen',''); + // extract start and end foldable fragment attributes + const start = $(this).attr('data-start'); + const end = $(this).attr('data-end'); + // replace normal fold span with controls for the first line of a foldable fragment + $(this).find('span[class=fold]:first').replaceWith(''); + // append div for folded (closed) representation + $(this).after(''); + // extract the first line from the "open" section to represent closed content + const line = $(this).children().first().clone(); + // remove any glow that might still be active on the original line + $(line).removeClass('glow'); + if (start) { + // if line already ends with a start marker (e.g. trailing {), remove it + $(line).html($(line).html().replace(new RegExp('\\s*'+start+'\\s*$','g'),'')); + } + // replace minus with plus symbol + $(line).find('span[class=fold]').css('background-image',codefold.plusImg[relPath]); + // append ellipsis + $(line).append(' '+start+'…'+end); + // insert constructed line into closed div + $('#foldclosed'+id).html(line); + }); + }, +}; /* @license-end */ -$(document).ready(function() { +$(function() { $('.code,.codeRef').each(function() { $(this).data('powertip',$('#a'+$(this).attr('href').replace(/.*\//,'').replace(/[^a-z_A-Z0-9]/g,'_')).html()); $.fn.powerTip.smartPlacementLists.s = [ 's', 'n', 'ne', 'se' ]; diff --git a/doc/html/files.html b/doc/html/files.html index a2eefdabe..322b19566 100644 --- a/doc/html/files.html +++ b/doc/html/files.html @@ -38,31 +38,43 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Here is a list of all documented files with brief descriptions:
    -
    [detail level 1234]
    - - +
    [detail level 1234]
     ▼ core
     ▼ include
    + + - + - - - + + + - - - + + + - + - - + + - + - - + + - + @@ -131,99 +143,100 @@ - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - + - - + + - +
     ▼ core
     ▼ include
     Context.h
     global.h
     helios_vector_types.h
     ▼ src
     ▼ src
     Context.cpp
     Context_data.cpp
     Context_fileIO.cpp
     global.cpp
     selfTest.cpp
     ▼ doc
     ▼ TutorialVideos
     ► RadiationModelPt2
     ▼ doc
     ▼ TutorialVideos
     ► RadiationModelPt2
     ▼ plugins
     ▼ aeriallidar
     ► include
     ▼ plugins
     ▼ aeriallidar
     ► include
     ► src
     ► src
     ▼ boundarylayerconductance
     ► include
     ▼ boundarylayerconductance
     ► include
     ► src
     ► src
     ▼ canopygenerator
     ► include
     ▼ canopygenerator
     ► include
     ► src
     ► src
     ▼ dummy
     ► include
     ▼ dummy
     ► include
     ► src
     ► src
     ▼ energybalance
     ► include
     ▼ energybalance
     ► include
     ► src
     ► src
     ▼ leafoptics
     ► include
     ▼ leafoptics
     ► include
     ► src
     ► src
     ▼ lidar
     ► include
     ▼ lidar
     ► include
     ► src
     ► src
     ▼ photosynthesis
     ► include
     ▼ photosynthesis
     ► include
     ► src
     ► src
     ▼ plantarchitecture
     ► include
     ▼ plantarchitecture
     ► include
     ► src
     ► src
     ▼ radiation
     ► include
     ▼ radiation
     ► include
     ► src
     ► src
     ▼ solarposition
     ► include
     ▼ solarposition
     ► include
     ► src
     ► src
     ▼ stomatalconductance
     ► include
     ▼ stomatalconductance
     ► include
     ► src
     ► src
     ▼ syntheticannotation
     ► include
     ▼ syntheticannotation
     ► include
     ► src
     ► src
     ▼ visualizer
     ► include
     ▼ visualizer
     ► include
     ► src
     ► src
     ▼ voxelintersection
     ► include
     ▼ voxelintersection
     ► include
     ► src
     ► src
     ▼ weberpenntree
     ► include
     ▼ weberpenntree
     ► include
     ► src
     ► src
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index cc22f1e98..e69cc24e0 100644 --- a/doc/html/functions.html +++ b/doc/html/functions.html @@ -38,31 +38,43 @@ Logo -

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      diff --git a/doc/html/functions_func_b.html b/doc/html/functions_func_b.html index 1380aba6e..c5754eb80 100644 --- a/doc/html/functions_func_b.html +++ b/doc/html/functions_func_b.html @@ -38,31 +38,43 @@ Logo -
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      diff --git a/doc/html/functions_func_o.html b/doc/html/functions_func_o.html index a4b2b3d0a..b2ff633de 100644 --- a/doc/html/functions_func_o.html +++ b/doc/html/functions_func_o.html @@ -38,31 +38,43 @@ Logo -
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       v1.3.25 +
       v1.3.26
      - + + + +
      +
      - y -

      -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
      + diff --git a/doc/html/functions_z.html b/doc/html/functions_z.html index 700532188..27a57f549 100644 --- a/doc/html/functions_z.html +++ b/doc/html/functions_z.html @@ -38,31 +38,43 @@ Logo -
       v1.3.25 +
       v1.3.26
      - + + + +
      +
      - z -

      -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
      + diff --git a/doc/html/functions_~.html b/doc/html/functions_~.html index b05bc3dc0..729d7c89e 100644 --- a/doc/html/functions_~.html +++ b/doc/html/functions_~.html @@ -38,31 +38,43 @@ Logo -
       v1.3.25 +
       v1.3.26
      - + + + +
      +
      - ~ -

      -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
      + diff --git a/doc/html/global_8cpp.html b/doc/html/global_8cpp.html index 445e007f2..16f9fb265 100644 --- a/doc/html/global_8cpp.html +++ b/doc/html/global_8cpp.html @@ -38,30 +38,41 @@ Logo -
       v1.3.25 +
       v1.3.26
      - + + + +
    +
    Data Structures | @@ -111,82 +123,82 @@ - + - +

    Macros

    #define PNG_DEBUG   3
    #define PNG_DEBUG   3
     
    #define PNG_SKIP_SETJMP_CHECK   1
    #define PNG_SKIP_SETJMP_CHECK   1
     
    - +

    Typedefs

    typedef struct jpg_error_mgr * jpg_error_ptr
    typedef struct jpg_error_mgr * jpg_error_ptr
     
    - - - - - - - - - - - - - - - - - - - - - - +

    Functions

    +
    template void helios::resize_vector< std::string > (std::vector< std::vector< std::string > > &, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec2 > (std::vector< std::vector< helios::vec2 > > &, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec3 > (std::vector< std::vector< helios::vec3 > > &, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec4 > (std::vector< std::vector< helios::vec4 > > &, uint, uint)
     
    +
    template void helios::resize_vector< helios::int2 > (std::vector< std::vector< helios::int2 > > &, uint, uint)
     
    +
    template void helios::resize_vector< helios::int3 > (std::vector< std::vector< helios::int3 > > &, uint, uint)
     
    +
    template void helios::resize_vector< helios::int4 > (std::vector< std::vector< helios::int4 > > &, uint, uint)
     
    +
    template void helios::resize_vector< std::string > (std::vector< std::vector< std::vector< std::string > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec2 > (std::vector< std::vector< std::vector< helios::vec2 > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec3 > (std::vector< std::vector< std::vector< helios::vec3 > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec4 > (std::vector< std::vector< std::vector< helios::vec4 > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::int2 > (std::vector< std::vector< std::vector< helios::int2 > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::int3 > (std::vector< std::vector< std::vector< helios::int3 > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::int4 > (std::vector< std::vector< std::vector< helios::int4 > > > &, uint, uint, uint)
     
    +
    template void helios::resize_vector< std::string > (std::vector< std::vector< std::vector< std::vector< std::string > > > > &, uint, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec2 > (std::vector< std::vector< std::vector< std::vector< helios::vec2 > > > > &, uint, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec3 > (std::vector< std::vector< std::vector< std::vector< helios::vec3 > > > > &, uint, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::vec4 > (std::vector< std::vector< std::vector< std::vector< helios::vec4 > > > > &, uint, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::int2 > (std::vector< std::vector< std::vector< std::vector< helios::int2 > > > > &, uint, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::int3 > (std::vector< std::vector< std::vector< std::vector< helios::int3 > > > > &, uint, uint, uint, uint)
     
    +
    template void helios::resize_vector< helios::int4 > (std::vector< std::vector< std::vector< std::vector< helios::int4 > > > > &, uint, uint, uint, uint)
     
     METHODDEF (void) jpg_error_exit(j_common_ptr cinfo)
     METHODDEF (void) jpg_error_exit(j_common_ptr cinfo)
     

    Detailed Description

    @@ -256,8 +268,7 @@

    METHODDEF ( - void  - ) + void ) @@ -270,7 +281,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/global_8cpp_source.html b/doc/html/global_8cpp_source.html index cd37d70a9..a5c1ba694 100644 --- a/doc/html/global_8cpp_source.html +++ b/doc/html/global_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    global.cpp
    @@ -106,12 +118,14 @@
    26
    27using namespace helios;
    28
    +
    29void helios::helios_runtime_error( const std::string &error_message ){
    30#ifdef HELIOS_DEBUG
    31 std::cerr << error_message << std::endl;
    32#endif
    33 throw(std::runtime_error(error_message));
    34}
    +
    35
    36RGBcolor RGB::red = make_RGBcolor( 1.f, 0.f, 0.f );
    37RGBcolor RGB::blue = make_RGBcolor( 0.f, 0.f, 1.f );
    @@ -137,6 +151,7 @@
    57SphericalCoord helios::nullrotation = make_SphericalCoord(0,0);
    58vec3 helios::nullorigin = make_vec3(0,0,0);
    59
    +
    60RGBcolor helios::blend(const RGBcolor &color0_RGB, const RGBcolor &color1_RGB, float weight_RGB ){
    61 RGBcolor color;
    62 weight_RGB = clamp(weight_RGB,0.f,1.f);
    @@ -145,7 +160,9 @@
    65 color.b = weight_RGB*color1_RGB.b+(1.f-weight_RGB)*color0_RGB.b;
    66 return color;
    67}
    +
    68
    +
    69RGBAcolor helios::blend(const RGBAcolor &color0_RGBA, const RGBAcolor &color1_RGBA, float weight_RGBA ){
    70 RGBAcolor color;
    71 weight_RGBA = clamp(weight_RGBA,0.f,1.f);
    @@ -155,11 +172,15 @@
    75 color.a = weight_RGBA*color1_RGBA.a+(1.f-weight_RGBA)*color0_RGBA.a;
    76 return color;
    77}
    +
    78
    +
    79vec3 helios::rotatePoint(const vec3& position, const SphericalCoord& rotation ) {
    80 return rotatePoint( position, rotation.elevation, rotation.azimuth );
    81}
    +
    82
    +
    83vec3 helios::rotatePoint(const vec3& position, float theta, float phi) {
    84
    85 if( theta==0.f && phi==0.f ){
    @@ -216,7 +237,9 @@
    136 return tmp;
    137
    138}
    +
    139
    +
    140vec3 helios::rotatePointAboutLine( const vec3& point, const vec3& line_base, const vec3& line_direction, float theta) {
    141
    142 if( theta==0.f ){
    @@ -251,7 +274,9 @@
    171 return position;
    172
    173}
    +
    174
    +
    175float helios::calculateTriangleArea( const vec3& v0, const vec3& v1, const vec3& v2 ){
    176 vec3 A( v1-v0 );
    177 vec3 B( v2-v0 );
    @@ -262,7 +287,9 @@
    182 float s = 0.5f*( a+b+c );
    183 return sqrtf( s*(s-a)*(s-b)*(s-c) );
    184}
    +
    185
    +
    186int helios::Date::JulianDay() const{
    187
    188 int skips_leap[] = {0, 31, 60, 91, 121, 152, 182, 213, 244, 274, 305, 335};
    @@ -278,7 +305,9 @@
    198 return skips[month-1]+day;
    199
    200}
    +
    201
    +
    202void helios::Date::incrementDay() {
    203 int JD = Calendar2Julian( *this );
    204 if( JD<365 || ( JD==356 && isLeapYear() ) ) {
    @@ -291,7 +320,9 @@
    211 year ++;
    212 }
    213}
    +
    214
    +
    215bool helios::Date::isLeapYear() const {
    216 if( (year-2000)%4 == 0 ){ //leap year
    217 return true;
    @@ -299,13 +330,17 @@
    219 return false;
    220 }
    221}
    +
    222
    +
    223float helios::randu(){
    224
    225 return float(rand()) / float(RAND_MAX + 1.);
    226
    227}
    +
    228
    +
    229int helios::randu( int imin, int imax ){
    230
    231 float ru = randu();
    @@ -317,19 +352,25 @@
    237 }
    238
    239}
    +
    240
    +
    241float helios::acos_safe( float x ){
    242 if (x < -1.0) x = -1.0 ;
    243 else if (x > 1.0) x = 1.0 ;
    244 return acosf(x) ;
    245}
    +
    246
    +
    247float helios::asin_safe( float x ){
    248 if (x < -1.0) x = -1.0 ;
    249 else if (x > 1.0) x = 1.0 ;
    250 return asinf(x) ;
    251}
    +
    252
    +
    253bool helios::lineIntersection(const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
    254{
    255
    @@ -352,7 +393,9 @@
    272 return !(r < 0 || r > 1 || s < 0 || s > 1);
    273
    274}
    +
    275
    +
    276bool helios::pointInPolygon(const vec2 &point, const std::vector<vec2> &polygon_verts ){
    277
    278 std::vector<vec2> pverts = polygon_verts;
    @@ -382,14 +425,18 @@
    302 }
    303
    304}
    +
    305
    +
    306void helios::wait( float seconds ){
    307
    308 int msec = (int)lround( seconds*1000.f );
    309 std::this_thread::sleep_for(std::chrono::milliseconds(msec));
    310
    311}
    +
    312
    +
    313void helios::makeRotationMatrix( float rotation, const char* axis, float (&T)[16] ){
    314
    315 float sx = sin(rotation);
    @@ -441,7 +488,9 @@
    361 T[15]=1.f;
    362
    363}
    +
    364
    +
    365void helios::makeRotationMatrix( float rotation, const helios::vec3& axis, float (&T)[16] ){
    366
    367 vec3 u = axis;
    @@ -467,7 +516,9 @@
    387 T[15]=1.f;
    388
    389}
    +
    390
    +
    391void helios::makeRotationMatrix( float rotation, const helios::vec3& origin, const helios::vec3& axis, float (&T)[16] ){
    392
    393 //Construct inverse translation matrix to translate back to the origin
    @@ -512,7 +563,9 @@
    432 matmult(Ttrans,T,T);
    433
    434}
    +
    435
    +
    436void helios::makeTranslationMatrix( const helios::vec3& translation, float (&T)[16] ){
    437
    438 T[0] = 1.f; //(0,0)
    @@ -533,7 +586,9 @@
    453 T[15] = 1.f;//(3,3)
    454
    455}
    +
    456
    +
    457void helios::makeScaleMatrix( const helios::vec3& scale, float (&T)[16] ){
    458
    459 T[0] = scale.x; //(0,0)
    @@ -554,7 +609,9 @@
    474 T[15] = 1.f;//(3,3)
    475
    476}
    +
    477
    +
    478void helios::makeScaleMatrix( const helios::vec3 &scale, const helios::vec3 &point, float (&T)[16] ){
    479
    480 T[0] = scale.x; //(0,0)
    @@ -575,7 +632,9 @@
    495 T[15] = 1.f;//(3,3)
    496
    497}
    +
    498
    +
    499void helios::matmult( const float ML[16], const float MR[16], float (&T)[16] ){
    500
    501 float M[16]={0.f};
    @@ -593,7 +652,9 @@
    513 }
    514
    515}
    +
    516
    +
    517void helios::vecmult( const float M[16], const helios::vec3& v3, helios::vec3& result ){
    518
    519 float v[4];
    @@ -615,7 +676,9 @@
    535 result.z = V[2];
    536
    537}
    +
    538
    +
    539void helios::vecmult( const float M[16], const float v[3], float (&result)[3] ){
    540
    541 float V[4]={0.f};
    @@ -631,7 +694,9 @@
    551 }
    552
    553}
    +
    554
    +
    555void helios::makeIdentityMatrix( float (&T)[16] ){
    556
    557 /* [0,0] */ T[0] = 1.f;
    @@ -652,15 +717,21 @@
    572 /* [3,3] */ T[15] = 1.f;
    573
    574}
    +
    575
    +
    576float helios::deg2rad( float deg ){
    577 return deg*float(M_PI)/180.f;
    578}
    +
    579
    +
    580float helios::rad2deg( float rad ){
    581 return rad*180.f/float(M_PI);
    582}
    +
    583
    +
    584float helios::atan2_2pi(float y, float x){
    585
    586 float v=0;
    @@ -686,20 +757,26 @@
    606 return v;
    607
    608}
    +
    609
    +
    610SphericalCoord helios::cart2sphere( const vec3& Cartesian ){
    611
    612 float radius = sqrtf( Cartesian.x*Cartesian.x + Cartesian.y*Cartesian.y + Cartesian.z*Cartesian.z );
    613 return {radius, asin_safe( Cartesian.z/radius ), atan2_2pi( Cartesian.x, Cartesian.y )};
    614
    615}
    +
    616
    +
    617vec3 helios::sphere2cart( const SphericalCoord& Spherical ){
    618
    619 return {Spherical.radius*cosf(Spherical.elevation)*sinf(Spherical.azimuth), Spherical.radius*cosf(Spherical.elevation)*cosf(Spherical.azimuth), Spherical.radius*sinf(Spherical.elevation)};
    620
    621}
    +
    622
    +
    623vec2 helios::string2vec2( const char* str ){
    624
    625 float o[2] = {99999,99999};
    @@ -719,7 +796,9 @@
    639 return make_vec2( o[0], o[1] );
    640
    641}
    +
    642
    +
    643vec3 helios::string2vec3( const char* str ){
    644
    645 float o[3] = {99999,99999,99999};
    @@ -739,7 +818,9 @@
    659 return make_vec3( o[0], o[1], o[2] );
    660
    661}
    +
    662
    +
    663vec4 helios::string2vec4( const char* str ){
    664
    665 float o[4] = {99999,99999,99999,99999};
    @@ -759,7 +840,9 @@
    679 return make_vec4( o[0], o[1], o[2], o[3] );
    680
    681}
    +
    682
    +
    683int2 helios::string2int2( const char* str ){
    684
    685 int o[2] = {99999,99999};
    @@ -779,7 +862,9 @@
    699 return make_int2( o[0], o[1] );
    700
    701}
    +
    702
    +
    703int3 helios::string2int3( const char* str ){
    704
    705 int o[3] = {99999,99999,99999};
    @@ -799,7 +884,9 @@
    719 return make_int3( o[0], o[1], o[2] );
    720
    721}
    +
    722
    +
    723int4 helios::string2int4( const char* str ){
    724
    725 int o[4] = {99999,99999,99999,99999};
    @@ -819,7 +906,9 @@
    739 return make_int4( o[0], o[1], o[2], o[3] );
    740
    741}
    +
    742
    +
    743RGBAcolor helios::string2RGBcolor( const char* str ){
    744
    745 float o[4] = {0,0,0,1};
    @@ -839,7 +928,9 @@
    759 return make_RGBAcolor( o[0], o[1], o[2], o[3] );
    760
    761}
    +
    762
    +
    763bool helios::parse_float( const std::string &input_string, float &converted_float ){
    764
    765 try {
    @@ -855,7 +946,9 @@
    775 return true;
    776
    777}
    +
    778
    +
    779bool helios::parse_double( const std::string &input_string, double &converted_double ){
    780
    781 try {
    @@ -870,7 +963,9 @@
    790 return true;
    791
    792}
    +
    793
    +
    794bool helios::parse_int( const std::string &input_string, int &converted_int ){
    795
    796 try {
    @@ -885,7 +980,9 @@
    805 return true;
    806
    807}
    +
    808
    +
    809bool helios::parse_int2( const std::string &input_string, int2 &converted_int2 ){
    810
    811 std::istringstream vecstream(input_string);
    @@ -901,7 +998,9 @@
    821 return true;
    822
    823}
    +
    824
    +
    825bool helios::parse_int3( const std::string &input_string, int3 &converted_int3 ){
    826
    827 std::istringstream vecstream(input_string);
    @@ -918,7 +1017,9 @@
    838 return true;
    839
    840}
    +
    841
    +
    842bool helios::parse_uint( const std::string &input_string, uint &converted_uint ){
    843
    844 try {
    @@ -936,7 +1037,9 @@
    856 return true;
    857
    858}
    +
    859
    +
    860bool helios::parse_vec2( const std::string &input_string, vec2 &converted_vec2 ){
    861
    862 std::istringstream vecstream(input_string);
    @@ -952,7 +1055,9 @@
    872 return true;
    873
    874}
    +
    875
    +
    876bool helios::parse_vec3( const std::string &input_string, vec3 &converted_vec3 ){
    877
    878 std::istringstream vecstream(input_string);
    @@ -969,7 +1074,9 @@
    889 return true;
    890
    891}
    +
    892
    +
    893bool helios::parse_RGBcolor( const std::string &input_string, RGBcolor &converted_rgb ){
    894
    895 std::istringstream vecstream(input_string);
    @@ -989,6 +1096,7 @@
    909 return true;
    910
    911}
    +
    912
    913bool helios::open_xml_file( const std::string &xml_file, pugi::xml_document &xmldoc, std::string &error_string ) {
    914
    @@ -1019,6 +1127,7 @@
    939
    940}
    941
    +
    942int helios::parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function ){
    943 std::string value_string = node.child_value();
    944 if( value_string.empty() ){
    @@ -1030,7 +1139,9 @@
    950 }
    951 return value;
    952}
    +
    953
    +
    954float helios::parse_xml_tag_float( const pugi::xml_node &node, const std::string &tag, const std::string &calling_function ){
    955 std::string value_string = node.child_value();
    956 if( value_string.empty() ){
    @@ -1042,7 +1153,9 @@
    962 }
    963 return value;
    964}
    +
    965
    +
    966vec2 helios::parse_xml_tag_vec2( const pugi::xml_node &node, const std::string &tag, const std::string &calling_function ){
    967 std::string value_string = node.child_value();
    968 if( value_string.empty() ){
    @@ -1054,7 +1167,9 @@
    974 }
    975 return value;
    976}
    +
    977
    +
    978vec3 helios::parse_xml_tag_vec3( const pugi::xml_node &node, const std::string &tag, const std::string &calling_function ){
    979 std::string value_string = node.child_value();
    980 if( value_string.empty() ){
    @@ -1066,11 +1181,15 @@
    986 }
    987 return value;
    988}
    +
    989
    +
    990std::string helios::parse_xml_tag_string( const pugi::xml_node &node, const std::string &tag, const std::string &calling_function ){
    991 return deblank(node.child_value());
    992}
    +
    993
    +
    994std::string helios::deblank(const char* input)
    995{
    996 int i,j;
    @@ -1088,11 +1207,15 @@
    1008 return output_c;
    1009
    1010}
    +
    1011
    +
    1012std::string helios::deblank(const std::string &input){
    1013 return deblank(input.c_str());
    1014}
    +
    1015
    +
    1016std::string helios::trim_whitespace(const std::string &input){
    1017
    1018 const std::string WHITESPACE = " \n\r\t\f\v";
    @@ -1108,7 +1231,9 @@
    1028 return outstring;
    1029
    1030}
    +
    1031
    +
    1032std::vector<std::string> helios::separate_string_by_delimiter( const std::string &inputstring, const std::string &delimiter ){
    1033
    1034 std::vector<std::string> separated_string;
    @@ -1130,8 +1255,10 @@
    1050 return separated_string;
    1051
    1052}
    +
    1053
    1054template <typename anytype>
    +
    1055anytype helios::clamp( anytype value, anytype min, anytype max ){
    1056 if( value<min ){
    1057 value = min;
    @@ -1140,12 +1267,14 @@
    1060 }
    1061 return value;
    1062}
    +
    1063
    -
    1064template float helios::clamp<float>(float,float,float);
    -
    1065template double helios::clamp<double>(double,double,double);
    -
    1066template int helios::clamp<int>(int,int,int);
    -
    1067template uint helios::clamp<uint>(uint,uint,uint);
    +
    1064template float helios::clamp<float>(float,float,float);
    +
    1065template double helios::clamp<double>(double,double,double);
    +
    1066template int helios::clamp<int>(int,int,int);
    +
    1067template uint helios::clamp<uint>(uint,uint,uint);
    1068
    +
    1069float helios::sum( const std::vector<float>& vect ){
    1070
    1071 if( vect.empty() ){
    @@ -1160,7 +1289,9 @@
    1080 return m;
    1081
    1082}
    +
    1083
    +
    1084float helios::mean( const std::vector<float>& vect ){
    1085
    1086 if( vect.empty() ){
    @@ -1176,7 +1307,9 @@
    1096 return m;
    1097
    1098}
    +
    1099
    +
    1100float helios::min( const std::vector<float>& vect ){
    1101
    1102 if( vect.empty() ){
    @@ -1186,7 +1319,9 @@
    1106 return *std::min_element(vect.begin(),vect.end());
    1107
    1108}
    +
    1109
    +
    1110int helios::min( const std::vector<int>& vect ){
    1111
    1112 if( vect.empty() ){
    @@ -1196,7 +1331,9 @@
    1116 return *std::min_element(vect.begin(),vect.end());
    1117
    1118}
    +
    1119
    +
    1120vec3 helios::min( const std::vector<vec3>& vect ){
    1121
    1122 if( vect.empty() ){
    @@ -1222,7 +1359,9 @@
    1142 return vmin;
    1143
    1144}
    +
    1145
    +
    1146float helios::max( const std::vector<float>& vect ){
    1147
    1148 if( vect.empty() ){
    @@ -1232,7 +1371,9 @@
    1152 return *std::max_element(vect.begin(),vect.end());
    1153
    1154}
    +
    1155
    +
    1156int helios::max( const std::vector<int>& vect ){
    1157
    1158 if( vect.empty() ){
    @@ -1242,7 +1383,9 @@
    1162 return *std::max_element(vect.begin(),vect.end());
    1163
    1164}
    +
    1165
    +
    1166vec3 helios::max( const std::vector<vec3>& vect ){
    1167
    1168 if( vect.empty() ){
    @@ -1268,7 +1411,9 @@
    1188 return vmax;
    1189
    1190}
    +
    1191
    +
    1192float helios::stdev( const std::vector<float> &vect ){
    1193
    1194 if( vect.empty() ){
    @@ -1290,7 +1435,9 @@
    1210
    1211 return sqrtf(stdev/float(size));
    1212}
    +
    1213
    +
    1214float helios::median( std::vector<float> vect ){
    1215
    1216 if( vect.empty() ){
    @@ -1314,19 +1461,22 @@
    1234 }
    1235 return median;
    1236}
    +
    1237
    1238template <typename anytype>
    +
    1239void helios::resize_vector( std::vector<std::vector<anytype> > &vec, uint Nx, uint Ny ){
    1240 vec.resize(Ny);
    1241 for( int j=0; j<Ny; j++ ){
    1242 vec.at(j).resize(Nx);
    1243 }
    1244}
    +
    1245
    -
    1246template void helios::resize_vector<float>( std::vector<std::vector<float> > &, uint, uint );
    -
    1247template void helios::resize_vector<double>( std::vector<std::vector<double> > &, uint, uint );
    -
    1248template void helios::resize_vector<int>( std::vector<std::vector<int> > &, uint, uint );
    -
    1249template void helios::resize_vector<uint>( std::vector<std::vector<uint> > &, uint, uint );
    +
    1246template void helios::resize_vector<float>( std::vector<std::vector<float> > &, uint, uint );
    +
    1247template void helios::resize_vector<double>( std::vector<std::vector<double> > &, uint, uint );
    +
    1248template void helios::resize_vector<int>( std::vector<std::vector<int> > &, uint, uint );
    +
    1249template void helios::resize_vector<uint>( std::vector<std::vector<uint> > &, uint, uint );
    1250template void helios::resize_vector<std::string>( std::vector<std::vector<std::string> > &, uint, uint );
    1251template void helios::resize_vector<helios::vec2>( std::vector<std::vector<helios::vec2> > &, uint, uint );
    1252template void helios::resize_vector<helios::vec3>( std::vector<std::vector<helios::vec3> > &, uint, uint );
    @@ -1336,6 +1486,7 @@
    1256template void helios::resize_vector<helios::int4>( std::vector<std::vector<helios::int4> > &, uint, uint );
    1257
    1258template <typename anytype>
    +
    1259void helios::resize_vector( std::vector<std::vector<std::vector<anytype> > > &vec, uint Nx, uint Ny, uint Nz ){
    1260 vec.resize(Nz);
    1261 for( int k=0; k<Nz; k++ ){
    @@ -1345,11 +1496,12 @@
    1265 }
    1266 }
    1267}
    +
    1268
    -
    1269template void helios::resize_vector<float>( std::vector<std::vector<std::vector<float> > > &, uint, uint, uint );
    -
    1270template void helios::resize_vector<double>( std::vector<std::vector<std::vector<double> > > &, uint, uint, uint );
    -
    1271template void helios::resize_vector<int>( std::vector<std::vector<std::vector<int> > > &, uint, uint, uint );
    -
    1272template void helios::resize_vector<uint>( std::vector<std::vector<std::vector<uint> > > &, uint, uint, uint );
    +
    1269template void helios::resize_vector<float>( std::vector<std::vector<std::vector<float> > > &, uint, uint, uint );
    +
    1270template void helios::resize_vector<double>( std::vector<std::vector<std::vector<double> > > &, uint, uint, uint );
    +
    1271template void helios::resize_vector<int>( std::vector<std::vector<std::vector<int> > > &, uint, uint, uint );
    +
    1272template void helios::resize_vector<uint>( std::vector<std::vector<std::vector<uint> > > &, uint, uint, uint );
    1273template void helios::resize_vector<std::string>( std::vector<std::vector<std::vector<std::string> > > &, uint, uint, uint );
    1274template void helios::resize_vector<helios::vec2>( std::vector<std::vector<std::vector<helios::vec2> > > &, uint, uint, uint );
    1275template void helios::resize_vector<helios::vec3>( std::vector<std::vector<std::vector<helios::vec3> > > &, uint, uint, uint );
    @@ -1359,6 +1511,7 @@
    1279template void helios::resize_vector<helios::int4>( std::vector<std::vector<std::vector<helios::int4> > > &, uint, uint, uint );
    1280
    1281template <typename anytype>
    +
    1282void helios::resize_vector( std::vector<std::vector<std::vector<std::vector<anytype> > > > &vec, uint Nx, uint Ny, uint Nz, uint Nw ){
    1283 vec.resize(Nw);
    1284 for( int w=0; w<Nw; w++ ){
    @@ -1371,11 +1524,12 @@
    1291 }
    1292 }
    1293}
    +
    1294
    -
    1295template void helios::resize_vector<float>( std::vector<std::vector<std::vector<std::vector<float> > > > &, uint, uint, uint, uint );
    -
    1296template void helios::resize_vector<double>( std::vector<std::vector<std::vector<std::vector<double> > > > &, uint, uint, uint, uint );
    -
    1297template void helios::resize_vector<int>( std::vector<std::vector<std::vector<std::vector<int> > > > &, uint, uint, uint, uint );
    -
    1298template void helios::resize_vector<uint>( std::vector<std::vector<std::vector<std::vector<uint> > > > &, uint, uint, uint, uint );
    +
    1295template void helios::resize_vector<float>( std::vector<std::vector<std::vector<std::vector<float> > > > &, uint, uint, uint, uint );
    +
    1296template void helios::resize_vector<double>( std::vector<std::vector<std::vector<std::vector<double> > > > &, uint, uint, uint, uint );
    +
    1297template void helios::resize_vector<int>( std::vector<std::vector<std::vector<std::vector<int> > > > &, uint, uint, uint, uint );
    +
    1298template void helios::resize_vector<uint>( std::vector<std::vector<std::vector<std::vector<uint> > > > &, uint, uint, uint, uint );
    1299template void helios::resize_vector<std::string>( std::vector<std::vector<std::vector<std::vector<std::string> > > > &, uint, uint, uint, uint );
    1300template void helios::resize_vector<helios::vec2>( std::vector<std::vector<std::vector<std::vector<helios::vec2> > > > &, uint, uint, uint, uint );
    1301template void helios::resize_vector<helios::vec3>( std::vector<std::vector<std::vector<std::vector<helios::vec3> > > > &, uint, uint, uint, uint );
    @@ -1384,6 +1538,7 @@
    1304template void helios::resize_vector<helios::int3>( std::vector<std::vector<std::vector<std::vector<helios::int3> > > > &, uint, uint, uint, uint );
    1305template void helios::resize_vector<helios::int4>( std::vector<std::vector<std::vector<std::vector<helios::int4> > > > &, uint, uint, uint, uint );
    1306
    +
    1307Date helios::CalendarDay( int Julian_day, int year ){
    1308
    1309 if( Julian_day<1 || Julian_day>366 ){
    @@ -1426,13 +1581,17 @@
    1346 return make_Date(day,month,year);
    1347
    1348}
    +
    1349
    +
    1350int helios::JulianDay( int day, int month, int year ){
    1351
    1352 return JulianDay( make_Date(day,month,year) );
    1353
    1354}
    +
    1355
    +
    1356int helios::JulianDay( const Date& date ){
    1357
    1358 int day = date.day;
    @@ -1460,6 +1619,7 @@
    1380 return skips[month]+day;
    1381
    1382}
    +
    1383
    1384// void Glyph::readFile( const char* __filename ){
    1385
    @@ -1511,6 +1671,7 @@
    1431
    1432// }
    1433
    +
    1434bool helios::PNGHasAlpha( const char* filename ){
    1435
    1436 std::string fn = filename;
    @@ -1564,7 +1725,9 @@
    1484 }
    1485
    1486}
    +
    1487
    +
    1488std::vector<std::vector<bool> > helios::readPNGAlpha( const std::string &filename ){
    1489
    1490 std::string fn = filename;
    @@ -1663,7 +1826,9 @@
    1583 return mask;
    1584
    1585}
    +
    1586
    +
    1587void helios::readPNG( const std::string &filename, uint & width, uint & height, std::vector<helios::RGBAcolor> &texture ){
    1588
    1589 std::string fn = filename;
    @@ -1752,7 +1917,9 @@
    1672
    1673
    1674}
    +
    1675
    +
    1676void helios::writePNG( const std::string &filename, uint width, uint height, const std::vector<helios::RGBAcolor> &pixel_data ) {
    1677 int y;
    1678
    @@ -1819,13 +1986,16 @@
    1739
    1740 png_destroy_write_struct(&png, &info);
    1741}
    +
    1742
    +
    1743struct jpg_error_mgr {
    1744
    1745 struct jpeg_error_mgr pub; /* "public" fields */
    1746
    1747 jmp_buf setjmp_buffer; /* for return to caller */
    1748};
    +
    1749typedef struct jpg_error_mgr * jpg_error_ptr;
    1750METHODDEF(void) jpg_error_exit (j_common_ptr cinfo){
    1751 auto myerr = (jpg_error_ptr) cinfo->err;
    @@ -1833,6 +2003,7 @@
    1753 longjmp(myerr->setjmp_buffer, 1);
    1754}
    1755
    +
    1756void helios::readJPEG( const std::string &filename, uint &width, uint &height, std::vector<helios::RGBcolor> &pixel_data ) {
    1757
    1758 auto file_extension = getFileExtension(filename);
    @@ -1902,7 +2073,9 @@
    1822 fclose(infile);
    1823
    1824}
    +
    1825
    +
    1826helios::int2 helios::getImageResolutionJPEG( const std::string &filename ){
    1827
    1828 auto file_extension = getFileExtension(filename);
    @@ -1944,7 +2117,9 @@
    1864 return make_int2(cinfo.output_width,cinfo.output_height);
    1865
    1866}
    +
    1867
    +
    1868void helios::writeJPEG( const std::string &a_filename, uint width, uint height, const std::vector<helios::RGBcolor> &pixel_data ) {
    1869
    1870 struct my_error_mgr {
    @@ -2019,7 +2194,9 @@
    1939 jpeg_destroy_compress(&cinfo);
    1940
    1941}
    +
    1942
    +
    1943std::vector<int> helios::flatten( const std::vector<std::vector<int> > &vec ){
    1944
    1945 size_t ind = 0;
    @@ -2040,7 +2217,9 @@
    1960 return flat;
    1961
    1962}
    +
    1963
    +
    1964std::vector<uint> helios::flatten( const std::vector<std::vector<uint> > &vec ){
    1965
    1966 size_t ind = 0;
    @@ -2061,7 +2240,9 @@
    1981 return flat;
    1982
    1983}
    +
    1984
    +
    1985std::vector<float> helios::flatten( const std::vector<std::vector<float> > &vec ){
    1986
    1987 size_t ind = 0;
    @@ -2082,7 +2263,9 @@
    2002 return flat;
    2003
    2004}
    +
    2005
    +
    2006std::vector<double> helios::flatten( const std::vector<std::vector<double> > &vec ){
    2007
    2008 size_t ind = 0;
    @@ -2103,7 +2286,9 @@
    2023 return flat;
    2024
    2025}
    +
    2026
    +
    2027std::vector<helios::vec2> helios::flatten( const std::vector<std::vector<helios::vec2> > &vec ){
    2028
    2029 size_t ind = 0;
    @@ -2124,7 +2309,9 @@
    2044 return flat;
    2045
    2046}
    +
    2047
    +
    2048std::vector<helios::vec3> helios::flatten( const std::vector<std::vector<helios::vec3> > &vec ){
    2049
    2050 size_t ind = 0;
    @@ -2145,7 +2332,9 @@
    2065 return flat;
    2066
    2067}
    +
    2068
    +
    2069std::vector<helios::vec4> helios::flatten( const std::vector<std::vector<helios::vec4> > &vec ){
    2070
    2071 size_t ind = 0;
    @@ -2166,7 +2355,9 @@
    2086 return flat;
    2087
    2088}
    +
    2089
    +
    2090std::vector<helios::int2> helios::flatten( const std::vector<std::vector<helios::int2> > &vec ){
    2091
    2092 size_t ind = 0;
    @@ -2187,7 +2378,9 @@
    2107 return flat;
    2108
    2109}
    +
    2110
    +
    2111std::vector<helios::int3> helios::flatten( const std::vector<std::vector<helios::int3> > &vec ){
    2112
    2113 size_t ind = 0;
    @@ -2208,7 +2401,9 @@
    2128 return flat;
    2129
    2130}
    +
    2131
    +
    2132std::vector<helios::int4> helios::flatten( const std::vector<std::vector<helios::int4> > &vec ){
    2133
    2134 size_t ind = 0;
    @@ -2229,7 +2424,9 @@
    2149 return flat;
    2150
    2151}
    +
    2152
    +
    2153std::vector<std::string> helios::flatten( const std::vector<std::vector<std::string> > &vec ){
    2154
    2155 size_t ind = 0;
    @@ -2250,7 +2447,9 @@
    2170 return flat;
    2171
    2172}
    +
    2173
    +
    2174std::vector<int> helios::flatten( const std::vector<std::vector<std::vector<int> > > &vec ){
    2175
    2176 size_t ind = 0;
    @@ -2275,7 +2474,9 @@
    2195 return flat;
    2196
    2197}
    +
    2198
    +
    2199std::vector<uint> helios::flatten( const std::vector<std::vector<std::vector<uint> > > &vec ){
    2200
    2201 size_t ind = 0;
    @@ -2300,7 +2501,9 @@
    2220 return flat;
    2221
    2222}
    +
    2223
    +
    2224std::vector<float> helios::flatten( const std::vector<std::vector<std::vector<float> > > &vec ){
    2225
    2226 size_t ind = 0;
    @@ -2325,7 +2528,9 @@
    2245 return flat;
    2246
    2247}
    +
    2248
    +
    2249std::vector<double> helios::flatten( const std::vector<std::vector<std::vector<double> > > &vec ){
    2250
    2251 size_t ind = 0;
    @@ -2350,7 +2555,9 @@
    2270 return flat;
    2271
    2272}
    +
    2273
    +
    2274std::vector<helios::vec2> helios::flatten( const std::vector<std::vector<std::vector<helios::vec2> > > &vec ){
    2275
    2276 size_t ind = 0;
    @@ -2375,7 +2582,9 @@
    2295 return flat;
    2296
    2297}
    +
    2298
    +
    2299std::vector<helios::vec3> helios::flatten( const std::vector<std::vector<std::vector<helios::vec3> > > &vec ){
    2300
    2301 size_t ind = 0;
    @@ -2400,7 +2609,9 @@
    2320 return flat;
    2321
    2322}
    +
    2323
    +
    2324std::vector<helios::vec4> helios::flatten( const std::vector<std::vector<std::vector<helios::vec4> > > &vec ){
    2325
    2326 size_t ind = 0;
    @@ -2425,7 +2636,9 @@
    2345 return flat;
    2346
    2347}
    +
    2348
    +
    2349std::vector<helios::int2> helios::flatten( const std::vector<std::vector<std::vector<helios::int2> > > &vec ){
    2350
    2351 size_t ind = 0;
    @@ -2450,7 +2663,9 @@
    2370 return flat;
    2371
    2372}
    +
    2373
    +
    2374std::vector<helios::int3> helios::flatten( const std::vector<std::vector<std::vector<helios::int3> > > &vec ){
    2375
    2376 size_t ind = 0;
    @@ -2475,7 +2690,9 @@
    2395 return flat;
    2396
    2397}
    +
    2398
    +
    2399std::vector<helios::int4> helios::flatten( const std::vector<std::vector<std::vector<helios::int4> > > &vec ){
    2400
    2401 size_t ind = 0;
    @@ -2500,7 +2717,9 @@
    2420 return flat;
    2421
    2422}
    +
    2423
    +
    2424std::vector<std::string> helios::flatten( const std::vector<std::vector<std::vector<std::string> > > &vec ){
    2425
    2426 size_t ind = 0;
    @@ -2525,7 +2744,9 @@
    2445 return flat;
    2446
    2447}
    +
    2448
    +
    2449std::vector<int> helios::flatten( const std::vector<std::vector<std::vector<std::vector<int> > > > &vec ){
    2450
    2451 size_t ind = 0;
    @@ -2554,7 +2775,9 @@
    2474 return flat;
    2475
    2476}
    +
    2477
    +
    2478std::vector<uint> helios::flatten( const std::vector<std::vector<std::vector<std::vector<uint> > > > &vec ){
    2479
    2480 size_t ind = 0;
    @@ -2583,7 +2806,9 @@
    2503 return flat;
    2504
    2505}
    +
    2506
    +
    2507std::vector<float> helios::flatten( const std::vector<std::vector<std::vector<std::vector<float> > > > &vec ){
    2508
    2509 size_t ind = 0;
    @@ -2612,7 +2837,9 @@
    2532 return flat;
    2533
    2534}
    +
    2535
    +
    2536std::vector<double> helios::flatten( const std::vector<std::vector<std::vector<std::vector<double> > > > &vec ){
    2537
    2538 size_t ind = 0;
    @@ -2641,7 +2868,9 @@
    2561 return flat;
    2562
    2563}
    +
    2564
    +
    2565std::vector<helios::vec2> helios::flatten( const std::vector<std::vector<std::vector<std::vector<helios::vec2> > > > &vec ){
    2566
    2567 size_t ind = 0;
    @@ -2670,7 +2899,9 @@
    2590 return flat;
    2591
    2592}
    +
    2593
    +
    2594std::vector<helios::vec3> helios::flatten( const std::vector<std::vector<std::vector<std::vector<helios::vec3> > > > &vec ){
    2595
    2596 size_t ind = 0;
    @@ -2699,7 +2930,9 @@
    2619 return flat;
    2620
    2621}
    +
    2622
    +
    2623std::vector<helios::vec4> helios::flatten( const std::vector<std::vector<std::vector<std::vector<helios::vec4> > > > &vec ){
    2624
    2625 size_t ind = 0;
    @@ -2728,7 +2961,9 @@
    2648 return flat;
    2649
    2650}
    +
    2651
    +
    2652std::vector<helios::int2> helios::flatten( const std::vector<std::vector<std::vector<std::vector<helios::int2> > > > &vec ){
    2653
    2654 size_t ind = 0;
    @@ -2757,7 +2992,9 @@
    2677 return flat;
    2678
    2679}
    +
    2680
    +
    2681std::vector<helios::int3> helios::flatten( const std::vector<std::vector<std::vector<std::vector<helios::int3> > > > &vec ){
    2682
    2683 size_t ind = 0;
    @@ -2786,7 +3023,9 @@
    2706 return flat;
    2707
    2708}
    +
    2709
    +
    2710std::vector<helios::int4> helios::flatten( const std::vector<std::vector<std::vector<std::vector<helios::int4> > > > &vec ){
    2711
    2712 size_t ind = 0;
    @@ -2815,7 +3054,9 @@
    2735 return flat;
    2736
    2737}
    +
    2738
    +
    2739std::vector<std::string> helios::flatten( const std::vector<std::vector<std::vector<std::vector<std::string> > > > &vec ){
    2740
    2741 size_t ind = 0;
    @@ -2844,7 +3085,9 @@
    2764 return flat;
    2765
    2766}
    +
    2767
    +
    2768helios::vec3 helios::spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end ){
    2769
    2770 //Perform interpolation between two 3D points using Cubic Hermite Spline
    @@ -2884,7 +3127,9 @@
    2804 return make_vec3(xq[0],xq[1],xq[2]);
    2805
    2806}
    +
    2807
    +
    2808float helios::XMLloadfloat( pugi::xml_node node, const char* field ){
    2809
    2810 const char* field_str = node.child_value(field);
    @@ -2901,7 +3146,9 @@
    2821 return value;
    2822
    2823}
    +
    2824
    +
    2825int helios::XMLloadint( pugi::xml_node node, const char* field ){
    2826
    2827 const char* field_str = node.child_value(field);
    @@ -2918,7 +3165,9 @@
    2838 return value;
    2839
    2840}
    +
    2841
    +
    2842std::string helios::XMLloadstring( pugi::xml_node node, const char* field ){
    2843
    2844 std::string field_str = deblank(node.child_value(field));
    @@ -2933,7 +3182,9 @@
    2853 return value;
    2854
    2855}
    +
    2856
    +
    2857helios::vec2 helios::XMLloadvec2( pugi::xml_node node, const char* field ){
    2858
    2859 const char* field_str = node.child_value(field);
    @@ -2948,7 +3199,9 @@
    2868 return value;
    2869
    2870}
    +
    2871
    +
    2872helios::vec3 helios::XMLloadvec3( pugi::xml_node node, const char* field ){
    2873
    2874 const char* field_str = node.child_value(field);
    @@ -2963,7 +3216,9 @@
    2883 return value;
    2884
    2885}
    +
    2886
    +
    2887helios::vec4 helios::XMLloadvec4( pugi::xml_node node, const char* field ){
    2888
    2889 const char* field_str = node.child_value(field);
    @@ -2978,7 +3233,9 @@
    2898 return value;
    2899
    2900}
    +
    2901
    +
    2902helios::int2 helios::XMLloadint2( pugi::xml_node node, const char* field ){
    2903
    2904 const char* field_str = node.child_value(field);
    @@ -2993,7 +3250,9 @@
    2913 return value;
    2914
    2915}
    +
    2916
    +
    2917helios::int3 helios::XMLloadint3( pugi::xml_node node, const char* field ){
    2918
    2919 const char* field_str = node.child_value(field);
    @@ -3008,7 +3267,9 @@
    2928 return value;
    2929
    2930}
    +
    2931
    +
    2932helios::int4 helios::XMLloadint4( pugi::xml_node node, const char* field ){
    2933
    2934 const char* field_str = node.child_value(field);
    @@ -3023,7 +3284,9 @@
    2943 return value;
    2944
    2945}
    +
    2946
    +
    2947helios::RGBcolor helios::XMLloadrgb( pugi::xml_node node, const char* field ){
    2948
    2949 const char* field_str = node.child_value(field);
    @@ -3038,7 +3301,9 @@
    2958 return make_RGBcolor(value.r,value.g,value.b);
    2959
    2960}
    +
    2961
    +
    2962helios::RGBAcolor helios::XMLloadrgba( pugi::xml_node node, const char* field ){
    2963
    2964 const char* field_str = node.child_value(field);
    @@ -3053,7 +3318,9 @@
    2973 return value;
    2974
    2975}
    +
    2976
    +
    2977float helios::fzero(float(*function)(float value, std::vector<float> &variables, const void *parameters), std::vector<float> &variables, const void *parameters, float init_guess, float err_tol, int max_iterations ){
    2978
    2979 float T;
    @@ -3098,7 +3365,9 @@
    3018 return T;
    3019
    3020}
    +
    3021
    +
    3022float helios::interp1( const std::vector<helios::vec2> &points, float x ) {
    3023
    3024 //Ensure that no 2 adjacent x values are equal, and that x values are monotonically increasing
    @@ -3147,26 +3416,36 @@
    3067 return lowerY + ((x - lowerX)/ deltaX) * deltaY;
    3068
    3069}
    +
    3070
    +
    3071float helios::point_distance( const helios::vec3 &p1 , const helios::vec3 &p2){
    3072 return (p1-p2).magnitude();
    3073}
    +
    3074
    +
    3075std::string helios::getFileExtension( const std::string &filepath ){
    3076 std::filesystem::path output_path_fs = filepath;
    3077 return output_path_fs.extension().string();
    3078}
    +
    3079
    +
    3080std::string helios::getFileStem( const std::string &filepath ){
    3081 std::filesystem::path output_path_fs = filepath;
    3082 return output_path_fs.stem().string();
    3083}
    +
    3084
    +
    3085std::string helios::getFileName( const std::string &filepath ){
    3086 std::filesystem::path output_path_fs = filepath;
    3087 return output_path_fs.filename().string();
    3088}
    +
    3089
    +
    3090std::string helios::getFilePath( const std::string &filepath, bool trailingslash ){
    3091 std::filesystem::path output_path_fs = filepath;
    3092 std::string output_path = output_path_fs.parent_path().string();
    @@ -3178,7 +3457,9 @@
    3098
    3099 return output_path;
    3100}
    +
    3101
    +
    3102bool helios::validateOutputPath(std::string &output_path, const std::vector<std::string> &allowable_file_extensions){
    3103
    3104 if( output_path.empty() ){ //path was empty
    @@ -3226,7 +3507,9 @@
    3146 return true;
    3147
    3148}
    +
    3149
    +
    3150std::vector<float> helios::importVectorFromFile(const std::string &filepath){
    3151
    3152 std::ifstream stream(filepath.c_str());
    @@ -3240,150 +3523,152 @@
    3160 return vec;
    3161
    3162}
    +
    -
    helios::parse_double
    bool parse_double(const std::string &input_string, double &converted_double)
    Convert a string into a double with error checking.
    Definition: global.cpp:779
    -
    helios::parse_xml_tag_float
    float parse_xml_tag_float(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a float value.
    Definition: global.cpp:954
    -
    helios::PNGHasAlpha
    bool PNGHasAlpha(const char *filename)
    Check whether PNG image file has an alpha/transparency channel.
    Definition: global.cpp:1434
    -
    helios::XMLloadint4
    helios::int4 XMLloadint4(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a int4.
    Definition: global.cpp:2932
    -
    helios::rotatePointAboutLine
    vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    Rotate a 3D vector about an arbitrary line.
    Definition: global.cpp:140
    -
    helios::importVectorFromFile
    std::vector< float > importVectorFromFile(const std::string &filepath)
    Read values contained in a text file into a one-dimensional vector of floats.
    Definition: global.cpp:3150
    -
    helios::parse_int2
    bool parse_int2(const std::string &input_string, int2 &converted_int2)
    Convert a string into an int2 with error checking.
    Definition: global.cpp:809
    -
    helios::XMLloadrgba
    helios::RGBAcolor XMLloadrgba(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into an RGBA color vector.
    Definition: global.cpp:2962
    -
    helios::parse_float
    bool parse_float(const std::string &input_string, float &converted_float)
    Convert a string into a float with error checking.
    Definition: global.cpp:763
    -
    helios::blend
    RGBcolor blend(const RGBcolor &color0, const RGBcolor &color1, float weight)
    Blend two RGB colors together.
    Definition: global.cpp:60
    -
    helios::parse_xml_tag_vec3
    vec3 parse_xml_tag_vec3(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
    Definition: global.cpp:978
    -
    helios::XMLloadvec2
    helios::vec2 XMLloadvec2(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec2.
    Definition: global.cpp:2857
    -
    helios::matmult
    void matmult(const float ML[16], const float MR[16], float(&T)[16])
    Multiply 4x4 matrices: T=ML*MR.
    Definition: global.cpp:499
    -
    helios::readJPEG
    void readJPEG(const std::string &filename, uint &width, uint &height, std::vector< helios::RGBcolor > &pixel_data)
    Function to read a JPEG image file into pixel data array.
    Definition: global.cpp:1756
    -
    helios::parse_vec3
    bool parse_vec3(const std::string &input_string, vec3 &converted_vec3)
    Convert a string into a vec3 with error checking.
    Definition: global.cpp:876
    -
    helios::CalendarDay
    Date CalendarDay(int Julian_day, int year)
    Convert Julian day to calendar day (day,month,year)
    Definition: global.cpp:1307
    -
    helios::parse_vec2
    bool parse_vec2(const std::string &input_string, vec2 &converted_vec2)
    Convert a string into a vec2 with error checking.
    Definition: global.cpp:860
    -
    helios::fzero
    float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
    Use Newton-Raphson method to find the zero of a function.
    Definition: global.cpp:2977
    -
    helios::XMLloadint
    int XMLloadint(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into an int.
    Definition: global.cpp:2825
    -
    helios::interp1
    float interp1(const std::vector< helios::vec2 > &points, float x)
    Function to perform linear interpolation based on a vector of discrete (x,y) values.
    Definition: global.cpp:3022
    -
    helios::point_distance
    float point_distance(const helios::vec3 &p1, const helios::vec3 &p2)
    Function to calculate the distance between two points.
    Definition: global.cpp:3071
    -
    helios::parse_uint
    bool parse_uint(const std::string &input_string, uint &converted_uint)
    Convert a string into an unsigned integer with error checking.
    Definition: global.cpp:842
    -
    helios::getFileExtension
    std::string getFileExtension(const std::string &filepath)
    Parse a file string to get the extension.
    Definition: global.cpp:3075
    -
    helios::validateOutputPath
    bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
    Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
    Definition: global.cpp:3102
    -
    helios::getFileName
    std::string getFileName(const std::string &filepath)
    Parse a file string to get the filename including extension.
    Definition: global.cpp:3085
    -
    helios::helios_runtime_error
    void helios_runtime_error(const std::string &error_message)
    Function to throw a runtime error.
    Definition: global.cpp:29
    -
    helios::parse_int
    bool parse_int(const std::string &input_string, int &converted_int)
    Convert a string into an integer with error checking.
    Definition: global.cpp:794
    -
    helios::parse_xml_tag_vec2
    vec2 parse_xml_tag_vec2(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec2 value (i.e., two space delimited floats)
    Definition: global.cpp:966
    -
    helios::XMLloadfloat
    float XMLloadfloat(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a float.
    Definition: global.cpp:2808
    -
    helios::parse_RGBcolor
    bool parse_RGBcolor(const std::string &input_string, RGBcolor &converted_rgb)
    Convert a string into an RGBcolor with error checking.
    Definition: global.cpp:893
    -
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition: global.cpp:1350
    -
    helios::XMLloadstring
    std::string XMLloadstring(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a string.
    Definition: global.cpp:2842
    -
    helios::nullorigin
    vec3 nullorigin
    Default null vec3 that gives the origin (0,0,0)
    Definition: global.cpp:58
    -
    helios::parse_int3
    bool parse_int3(const std::string &input_string, int3 &converted_int3)
    Convert a string into an int3 with error checking.
    Definition: global.cpp:825
    -
    helios::parse_xml_tag_string
    std::string parse_xml_tag_string(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a string.
    Definition: global.cpp:990
    -
    helios::XMLloadvec4
    helios::vec4 XMLloadvec4(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec4.
    Definition: global.cpp:2887
    -
    helios::getImageResolutionJPEG
    helios::int2 getImageResolutionJPEG(const std::string &filename)
    Function to read a JPEG image file into pixel data array.
    Definition: global.cpp:1826
    -
    helios::writeJPEG
    void writeJPEG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBcolor > &pixel_data)
    Function to write a JPEG image based on pixel data.
    Definition: global.cpp:1868
    -
    helios::readPNG
    void readPNG(const std::string &filename, uint &width, uint &height, std::vector< helios::RGBAcolor > &pixel_data)
    Function to read a PNG image file into pixel data array.
    Definition: global.cpp:1587
    -
    helios::getFileStem
    std::string getFileStem(const std::string &filepath)
    Parse a file string to get the filename without extension.
    Definition: global.cpp:3080
    -
    helios::XMLloadvec3
    helios::vec3 XMLloadvec3(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec3.
    Definition: global.cpp:2872
    -
    helios::makeIdentityMatrix
    void makeIdentityMatrix(float(&T)[16])
    Construct an identity matrix.
    Definition: global.cpp:555
    -
    helios::XMLloadrgb
    helios::RGBcolor XMLloadrgb(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into an RGB color vector.
    Definition: global.cpp:2947
    -
    helios::getFilePath
    std::string getFilePath(const std::string &filepath, bool trailingslash=true)
    Parse a file string to get the path (i.e., portion of the string before the file name).
    Definition: global.cpp:3090
    -
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition: global.cpp:57
    -
    helios::readPNGAlpha
    std::vector< std::vector< bool > > readPNGAlpha(const std::string &filename)
    Function to read the alpha channel from a PNG image.
    Definition: global.cpp:1488
    -
    helios::XMLloadint3
    helios::int3 XMLloadint3(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a int3.
    Definition: global.cpp:2917
    -
    helios::XMLloadint2
    helios::int2 XMLloadint2(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec2.
    Definition: global.cpp:2902
    -
    helios::vecmult
    void vecmult(const float M[16], const float v[3], float(&result)[3])
    Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
    Definition: global.cpp:539
    -
    helios::writePNG
    void writePNG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBAcolor > &pixel_data)
    Function to write a PNG image based on pixel data.
    Definition: global.cpp:1676
    -
    helios::parse_xml_tag_int
    int parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing an integer value.
    Definition: global.cpp:942
    -
    helios::randu
    float randu()
    Random number from a uniform distribution between 0 and 1.
    Definition: global.cpp:223
    -
    helios::rad2deg
    float rad2deg(float rad)
    Convert radians to degrees.
    Definition: global.cpp:580
    -
    helios::flatten
    std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
    Function to flatten a 2D int vector into a 1D vector.
    Definition: global.cpp:1943
    -
    helios::rotatePoint
    vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
    Function to rotate a 3D vector given spherical angles elevation and azimuth.
    Definition: global.cpp:79
    -
    helios::string2vec2
    vec2 string2vec2(const char *str)
    Convert a space-delimited string into a vec2 vector.
    Definition: global.cpp:623
    -
    helios::string2int2
    int2 string2int2(const char *str)
    Convert a space-delimited string into an int2 vector.
    Definition: global.cpp:683
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::atan2_2pi
    float atan2_2pi(float y, float x)
    Four quadrant arc tangent between 0 and 2*pi.
    Definition: global.cpp:584
    -
    helios::lineIntersection
    bool lineIntersection(const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
    Determine if two line segments intersect. The lines segments are defined by vertices (p1,...
    Definition: global.cpp:253
    -
    helios::makeRotationMatrix
    void makeRotationMatrix(float rotation, const char *axis, float(&transform)[16])
    Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
    Definition: global.cpp:313
    -
    helios::median
    float median(std::vector< float > vect)
    Median of a vector of floats.
    Definition: global.cpp:1214
    -
    helios::string2int4
    int4 string2int4(const char *str)
    Convert a space-delimited string into an int4 vector.
    Definition: global.cpp:723
    -
    helios::min
    float min(const std::vector< float > &vect)
    Minimum value of a vector of floats.
    Definition: global.cpp:1100
    -
    helios::trim_whitespace
    std::string trim_whitespace(const std::string &input)
    Remove leading and trailing whitespace from a string.
    Definition: global.cpp:1016
    -
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition: global.cpp:576
    -
    helios::string2vec3
    vec3 string2vec3(const char *str)
    Convert a space-delimited string into a vec3 vector.
    Definition: global.cpp:643
    -
    helios::makeTranslationMatrix
    void makeTranslationMatrix(const helios::vec3 &translation, float(&transform)[16])
    Construct translation matrix.
    Definition: global.cpp:436
    -
    helios::calculateTriangleArea
    float calculateTriangleArea(const vec3 &v0, const vec3 &v1, const vec3 &v2)
    Calculate the area of a triangle given its three vertices.
    Definition: global.cpp:175
    -
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition: global.cpp:2768
    -
    helios::string2RGBcolor
    RGBAcolor string2RGBcolor(const char *str)
    Convert a space-delimited string into an RGBcolor vector.
    Definition: global.cpp:743
    -
    helios::max
    float max(const std::vector< float > &vect)
    Maximum value of a vector of floats.
    Definition: global.cpp:1146
    -
    helios::stdev
    float stdev(const std::vector< float > &vect)
    Standard deviation of a vector of floats.
    Definition: global.cpp:1192
    -
    helios::resize_vector
    void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
    Resize 2D C++ vector.
    Definition: global.cpp:1239
    -
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition: global.cpp:617
    -
    helios::makeScaleMatrix
    void makeScaleMatrix(const helios::vec3 &scale, float(&T)[16])
    Construct matrix to scale about the origin.
    Definition: global.cpp:457
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::sum
    float sum(const std::vector< float > &vect)
    Sum of a vector of floats.
    Definition: global.cpp:1069
    -
    helios::pointInPolygon
    bool pointInPolygon(const vec2 &point, const std::vector< vec2 > &polygon_verts)
    Determine whether point lines within a polygon.
    Definition: global.cpp:276
    -
    helios::asin_safe
    float asin_safe(float x)
    arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:247
    -
    helios::string2int3
    int3 string2int3(const char *str)
    Convert a space-delimited string into an int3 vector.
    Definition: global.cpp:703
    -
    helios::wait
    void wait(float seconds)
    Wait/sleep for a specified amount of time.
    Definition: global.cpp:306
    -
    helios::deblank
    std::string deblank(const char *input)
    Remove all whitespace from character array.
    Definition: global.cpp:994
    -
    helios::string2vec4
    vec4 string2vec4(const char *str)
    Convert a space-delimited string into a vec4 vector.
    Definition: global.cpp:663
    -
    helios::mean
    float mean(const std::vector< float > &vect)
    Mean value of a vector of floats.
    Definition: global.cpp:1084
    -
    helios::separate_string_by_delimiter
    std::vector< std::string > separate_string_by_delimiter(const std::string &inputstring, const std::string &delimiter)
    Separate string by delimiter and store into a vector.
    Definition: global.cpp:1032
    -
    helios::clamp
    anytype clamp(anytype value, anytype min, anytype max)
    Clamp value to be within some specified bounds.
    Definition: global.cpp:1055
    -
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition: helios_vector_types.h:99
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_RGBAcolor
    RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
    Make an RGBAcolor vector.
    Definition: helios_vector_types.h:1133
    -
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition: helios_vector_types.h:1241
    -
    helios::Julian2Calendar
    Date Julian2Calendar(int JulianDay, int year)
    Convert a Julian day to a calendar Date vector.
    Definition: helios_vector_types.h:1268
    -
    helios::Calendar2Julian
    int Calendar2Julian(Date date)
    Convert a calendar Date vector to Julian day.
    Definition: helios_vector_types.h:1310
    -
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition: helios_vector_types.h:954
    -
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition: helios_vector_types.h:198
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_vec4
    vec4 make_vec4(float x, float y, float z, float w)
    Make a vec4 from three floats.
    Definition: helios_vector_types.h:763
    -
    helios::make_int4
    int4 make_int4(int x, int y, int z, int w)
    Make an int4 vector from three ints.
    Definition: helios_vector_types.h:299
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    - -
    helios::Date::month
    int month
    Month of year.
    Definition: helios_vector_types.h:1174
    -
    helios::Date::incrementDay
    void incrementDay()
    Increment Date vector by one day.
    Definition: global.cpp:202
    -
    helios::Date::day
    int day
    Day of month.
    Definition: helios_vector_types.h:1172
    -
    helios::Date::JulianDay
    int JulianDay() const
    Convert to Julian day.
    Definition: global.cpp:186
    -
    helios::Date::isLeapYear
    bool isLeapYear() const
    Check whether it is a leap year.
    Definition: global.cpp:215
    -
    helios::Date::year
    int year
    Year in YYYY format.
    Definition: helios_vector_types.h:1176
    -
    helios::RGBAcolor
    R-G-B-A color vector.
    Definition: helios_vector_types.h:1024
    -
    helios::RGBAcolor::r
    float r
    Red color component.
    Definition: helios_vector_types.h:1029
    -
    helios::RGBAcolor::a
    float a
    Alpha (transparency) component.
    Definition: helios_vector_types.h:1038
    -
    helios::RGBAcolor::b
    float b
    Blue color component.
    Definition: helios_vector_types.h:1035
    -
    helios::RGBAcolor::g
    float g
    Green color component.
    Definition: helios_vector_types.h:1032
    -
    helios::RGBcolor
    R-G-B color vector.
    Definition: helios_vector_types.h:844
    -
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition: helios_vector_types.h:855
    -
    helios::RGBcolor::r
    float r
    Red color component.
    Definition: helios_vector_types.h:849
    -
    helios::RGBcolor::g
    float g
    Green color component.
    Definition: helios_vector_types.h:852
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    - -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::int2
    Vector of two elements of type 'int'.
    Definition: helios_vector_types.h:44
    -
    helios::int2::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:50
    -
    helios::int2::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:48
    -
    helios::int3
    Vector of three elements of type 'int'.
    Definition: helios_vector_types.h:146
    -
    helios::int3::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:150
    -
    helios::int3::z
    int z
    Third element in vector.
    Definition: helios_vector_types.h:154
    -
    helios::int3::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:152
    -
    helios::int4
    Vector of four elements of type 'int'.
    Definition: helios_vector_types.h:243
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec2::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:350
    -
    helios::vec2::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:352
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:511
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    -
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition: helios_vector_types.h:526
    -
    helios::vec4
    Vector of four elements of type 'float'.
    Definition: helios_vector_types.h:673
    -
    jpg_error_mgr
    Definition: global.cpp:1743
    -
    my_error_mgr
    Definition: Visualizer.cpp:43
    +
    helios::parse_double
    bool parse_double(const std::string &input_string, double &converted_double)
    Convert a string into a double with error checking.
    Definition global.cpp:779
    +
    helios::parse_xml_tag_float
    float parse_xml_tag_float(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a float value.
    Definition global.cpp:954
    +
    helios::PNGHasAlpha
    bool PNGHasAlpha(const char *filename)
    Check whether PNG image file has an alpha/transparency channel.
    Definition global.cpp:1434
    +
    helios::XMLloadint4
    helios::int4 XMLloadint4(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a int4.
    Definition global.cpp:2932
    +
    helios::rotatePointAboutLine
    vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    Rotate a 3D vector about an arbitrary line.
    Definition global.cpp:140
    +
    helios::importVectorFromFile
    std::vector< float > importVectorFromFile(const std::string &filepath)
    Read values contained in a text file into a one-dimensional vector of floats.
    Definition global.cpp:3150
    +
    helios::parse_int2
    bool parse_int2(const std::string &input_string, int2 &converted_int2)
    Convert a string into an int2 with error checking.
    Definition global.cpp:809
    +
    helios::XMLloadrgba
    helios::RGBAcolor XMLloadrgba(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into an RGBA color vector.
    Definition global.cpp:2962
    +
    helios::parse_float
    bool parse_float(const std::string &input_string, float &converted_float)
    Convert a string into a float with error checking.
    Definition global.cpp:763
    +
    helios::blend
    RGBcolor blend(const RGBcolor &color0, const RGBcolor &color1, float weight)
    Blend two RGB colors together.
    Definition global.cpp:60
    +
    helios::parse_xml_tag_vec3
    vec3 parse_xml_tag_vec3(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
    Definition global.cpp:978
    +
    helios::XMLloadvec2
    helios::vec2 XMLloadvec2(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec2.
    Definition global.cpp:2857
    +
    helios::matmult
    void matmult(const float ML[16], const float MR[16], float(&T)[16])
    Multiply 4x4 matrices: T=ML*MR.
    Definition global.cpp:499
    +
    helios::readJPEG
    void readJPEG(const std::string &filename, uint &width, uint &height, std::vector< helios::RGBcolor > &pixel_data)
    Function to read a JPEG image file into pixel data array.
    Definition global.cpp:1756
    +
    helios::parse_vec3
    bool parse_vec3(const std::string &input_string, vec3 &converted_vec3)
    Convert a string into a vec3 with error checking.
    Definition global.cpp:876
    +
    helios::CalendarDay
    Date CalendarDay(int Julian_day, int year)
    Convert Julian day to calendar day (day,month,year)
    Definition global.cpp:1307
    +
    helios::parse_vec2
    bool parse_vec2(const std::string &input_string, vec2 &converted_vec2)
    Convert a string into a vec2 with error checking.
    Definition global.cpp:860
    +
    helios::fzero
    float fzero(float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
    Use Newton-Raphson method to find the zero of a function.
    Definition global.cpp:2977
    +
    helios::XMLloadint
    int XMLloadint(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into an int.
    Definition global.cpp:2825
    +
    helios::interp1
    float interp1(const std::vector< helios::vec2 > &points, float x)
    Function to perform linear interpolation based on a vector of discrete (x,y) values.
    Definition global.cpp:3022
    +
    helios::point_distance
    float point_distance(const helios::vec3 &p1, const helios::vec3 &p2)
    Function to calculate the distance between two points.
    Definition global.cpp:3071
    +
    helios::parse_uint
    bool parse_uint(const std::string &input_string, uint &converted_uint)
    Convert a string into an unsigned integer with error checking.
    Definition global.cpp:842
    +
    helios::getFileExtension
    std::string getFileExtension(const std::string &filepath)
    Parse a file string to get the extension.
    Definition global.cpp:3075
    +
    helios::validateOutputPath
    bool validateOutputPath(std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
    Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
    Definition global.cpp:3102
    +
    helios::getFileName
    std::string getFileName(const std::string &filepath)
    Parse a file string to get the filename including extension.
    Definition global.cpp:3085
    +
    helios::helios_runtime_error
    void helios_runtime_error(const std::string &error_message)
    Function to throw a runtime error.
    Definition global.cpp:29
    +
    helios::parse_int
    bool parse_int(const std::string &input_string, int &converted_int)
    Convert a string into an integer with error checking.
    Definition global.cpp:794
    +
    helios::parse_xml_tag_vec2
    vec2 parse_xml_tag_vec2(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec2 value (i.e., two space delimited floats)
    Definition global.cpp:966
    +
    helios::XMLloadfloat
    float XMLloadfloat(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a float.
    Definition global.cpp:2808
    +
    helios::parse_RGBcolor
    bool parse_RGBcolor(const std::string &input_string, RGBcolor &converted_rgb)
    Convert a string into an RGBcolor with error checking.
    Definition global.cpp:893
    +
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition global.cpp:1350
    +
    helios::XMLloadstring
    std::string XMLloadstring(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a string.
    Definition global.cpp:2842
    +
    helios::nullorigin
    vec3 nullorigin
    Default null vec3 that gives the origin (0,0,0)
    Definition global.cpp:58
    +
    helios::parse_int3
    bool parse_int3(const std::string &input_string, int3 &converted_int3)
    Convert a string into an int3 with error checking.
    Definition global.cpp:825
    +
    helios::parse_xml_tag_string
    std::string parse_xml_tag_string(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a string.
    Definition global.cpp:990
    +
    helios::XMLloadvec4
    helios::vec4 XMLloadvec4(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec4.
    Definition global.cpp:2887
    +
    helios::getImageResolutionJPEG
    helios::int2 getImageResolutionJPEG(const std::string &filename)
    Function to read a JPEG image file into pixel data array.
    Definition global.cpp:1826
    +
    helios::writeJPEG
    void writeJPEG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBcolor > &pixel_data)
    Function to write a JPEG image based on pixel data.
    Definition global.cpp:1868
    +
    helios::readPNG
    void readPNG(const std::string &filename, uint &width, uint &height, std::vector< helios::RGBAcolor > &pixel_data)
    Function to read a PNG image file into pixel data array.
    Definition global.cpp:1587
    +
    helios::getFileStem
    std::string getFileStem(const std::string &filepath)
    Parse a file string to get the filename without extension.
    Definition global.cpp:3080
    +
    helios::XMLloadvec3
    helios::vec3 XMLloadvec3(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec3.
    Definition global.cpp:2872
    +
    helios::makeIdentityMatrix
    void makeIdentityMatrix(float(&T)[16])
    Construct an identity matrix.
    Definition global.cpp:555
    +
    helios::XMLloadrgb
    helios::RGBcolor XMLloadrgb(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into an RGB color vector.
    Definition global.cpp:2947
    +
    helios::getFilePath
    std::string getFilePath(const std::string &filepath, bool trailingslash=true)
    Parse a file string to get the path (i.e., portion of the string before the file name).
    Definition global.cpp:3090
    +
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition global.cpp:57
    +
    helios::readPNGAlpha
    std::vector< std::vector< bool > > readPNGAlpha(const std::string &filename)
    Function to read the alpha channel from a PNG image.
    Definition global.cpp:1488
    +
    helios::XMLloadint3
    helios::int3 XMLloadint3(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a int3.
    Definition global.cpp:2917
    +
    helios::XMLloadint2
    helios::int2 XMLloadint2(pugi::xml_node node, const char *field)
    Function to load and convert a field in a pugi XML node into a vec2.
    Definition global.cpp:2902
    +
    helios::vecmult
    void vecmult(const float M[16], const float v[3], float(&result)[3])
    Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
    Definition global.cpp:539
    +
    helios::writePNG
    void writePNG(const std::string &filename, uint width, uint height, const std::vector< helios::RGBAcolor > &pixel_data)
    Function to write a PNG image based on pixel data.
    Definition global.cpp:1676
    +
    helios::parse_xml_tag_int
    int parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing an integer value.
    Definition global.cpp:942
    +
    helios::randu
    float randu()
    Random number from a uniform distribution between 0 and 1.
    Definition global.cpp:223
    +
    helios::rad2deg
    float rad2deg(float rad)
    Convert radians to degrees.
    Definition global.cpp:580
    +
    helios::flatten
    std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
    Function to flatten a 2D int vector into a 1D vector.
    Definition global.cpp:1943
    +
    helios::rotatePoint
    vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
    Function to rotate a 3D vector given spherical angles elevation and azimuth.
    Definition global.cpp:79
    +
    helios::string2vec2
    vec2 string2vec2(const char *str)
    Convert a space-delimited string into a vec2 vector.
    Definition global.cpp:623
    +
    helios::string2int2
    int2 string2int2(const char *str)
    Convert a space-delimited string into an int2 vector.
    Definition global.cpp:683
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::atan2_2pi
    float atan2_2pi(float y, float x)
    Four quadrant arc tangent between 0 and 2*pi.
    Definition global.cpp:584
    +
    helios::lineIntersection
    bool lineIntersection(const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
    Determine if two line segments intersect. The lines segments are defined by vertices (p1,...
    Definition global.cpp:253
    +
    helios::makeRotationMatrix
    void makeRotationMatrix(float rotation, const char *axis, float(&transform)[16])
    Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
    Definition global.cpp:313
    +
    helios::median
    float median(std::vector< float > vect)
    Median of a vector of floats.
    Definition global.cpp:1214
    +
    helios::string2int4
    int4 string2int4(const char *str)
    Convert a space-delimited string into an int4 vector.
    Definition global.cpp:723
    +
    helios::min
    float min(const std::vector< float > &vect)
    Minimum value of a vector of floats.
    Definition global.cpp:1100
    +
    helios::trim_whitespace
    std::string trim_whitespace(const std::string &input)
    Remove leading and trailing whitespace from a string.
    Definition global.cpp:1016
    +
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition global.cpp:576
    +
    helios::string2vec3
    vec3 string2vec3(const char *str)
    Convert a space-delimited string into a vec3 vector.
    Definition global.cpp:643
    +
    helios::makeTranslationMatrix
    void makeTranslationMatrix(const helios::vec3 &translation, float(&transform)[16])
    Construct translation matrix.
    Definition global.cpp:436
    +
    helios::calculateTriangleArea
    float calculateTriangleArea(const vec3 &v0, const vec3 &v1, const vec3 &v2)
    Calculate the area of a triangle given its three vertices.
    Definition global.cpp:175
    +
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition global.cpp:2768
    +
    helios::string2RGBcolor
    RGBAcolor string2RGBcolor(const char *str)
    Convert a space-delimited string into an RGBcolor vector.
    Definition global.cpp:743
    +
    helios::max
    float max(const std::vector< float > &vect)
    Maximum value of a vector of floats.
    Definition global.cpp:1146
    +
    helios::stdev
    float stdev(const std::vector< float > &vect)
    Standard deviation of a vector of floats.
    Definition global.cpp:1192
    +
    helios::resize_vector
    void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
    Resize 2D C++ vector.
    Definition global.cpp:1239
    +
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition global.cpp:617
    +
    helios::makeScaleMatrix
    void makeScaleMatrix(const helios::vec3 &scale, float(&T)[16])
    Construct matrix to scale about the origin.
    Definition global.cpp:457
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::sum
    float sum(const std::vector< float > &vect)
    Sum of a vector of floats.
    Definition global.cpp:1069
    +
    helios::pointInPolygon
    bool pointInPolygon(const vec2 &point, const std::vector< vec2 > &polygon_verts)
    Determine whether point lines within a polygon.
    Definition global.cpp:276
    +
    helios::asin_safe
    float asin_safe(float x)
    arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:247
    +
    helios::string2int3
    int3 string2int3(const char *str)
    Convert a space-delimited string into an int3 vector.
    Definition global.cpp:703
    +
    helios::wait
    void wait(float seconds)
    Wait/sleep for a specified amount of time.
    Definition global.cpp:306
    +
    helios::deblank
    std::string deblank(const char *input)
    Remove all whitespace from character array.
    Definition global.cpp:994
    +
    helios::string2vec4
    vec4 string2vec4(const char *str)
    Convert a space-delimited string into a vec4 vector.
    Definition global.cpp:663
    +
    helios::mean
    float mean(const std::vector< float > &vect)
    Mean value of a vector of floats.
    Definition global.cpp:1084
    +
    helios::separate_string_by_delimiter
    std::vector< std::string > separate_string_by_delimiter(const std::string &inputstring, const std::string &delimiter)
    Separate string by delimiter and store into a vector.
    Definition global.cpp:1032
    +
    helios::clamp
    anytype clamp(anytype value, anytype min, anytype max)
    Clamp value to be within some specified bounds.
    Definition global.cpp:1055
    +
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition helios_vector_types.h:99
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_RGBAcolor
    RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
    Make an RGBAcolor vector.
    Definition helios_vector_types.h:1133
    +
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition helios_vector_types.h:1241
    +
    helios::Julian2Calendar
    Date Julian2Calendar(int JulianDay, int year)
    Convert a Julian day to a calendar Date vector.
    Definition helios_vector_types.h:1268
    +
    helios::Calendar2Julian
    int Calendar2Julian(Date date)
    Convert a calendar Date vector to Julian day.
    Definition helios_vector_types.h:1310
    +
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition helios_vector_types.h:954
    +
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition helios_vector_types.h:198
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_vec4
    vec4 make_vec4(float x, float y, float z, float w)
    Make a vec4 from three floats.
    Definition helios_vector_types.h:763
    +
    helios::make_int4
    int4 make_int4(int x, int y, int z, int w)
    Make an int4 vector from three ints.
    Definition helios_vector_types.h:299
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    + +
    helios::Date::month
    int month
    Month of year.
    Definition helios_vector_types.h:1174
    +
    helios::Date::incrementDay
    void incrementDay()
    Increment Date vector by one day.
    Definition global.cpp:202
    +
    helios::Date::day
    int day
    Day of month.
    Definition helios_vector_types.h:1172
    +
    helios::Date::JulianDay
    int JulianDay() const
    Convert to Julian day.
    Definition global.cpp:186
    +
    helios::Date::isLeapYear
    bool isLeapYear() const
    Check whether it is a leap year.
    Definition global.cpp:215
    +
    helios::Date::year
    int year
    Year in YYYY format.
    Definition helios_vector_types.h:1176
    +
    helios::RGBAcolor
    R-G-B-A color vector.
    Definition helios_vector_types.h:1024
    +
    helios::RGBAcolor::r
    float r
    Red color component.
    Definition helios_vector_types.h:1029
    +
    helios::RGBAcolor::a
    float a
    Alpha (transparency) component.
    Definition helios_vector_types.h:1038
    +
    helios::RGBAcolor::b
    float b
    Blue color component.
    Definition helios_vector_types.h:1035
    +
    helios::RGBAcolor::g
    float g
    Green color component.
    Definition helios_vector_types.h:1032
    +
    helios::RGBcolor
    R-G-B color vector.
    Definition helios_vector_types.h:844
    +
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition helios_vector_types.h:855
    +
    helios::RGBcolor::r
    float r
    Red color component.
    Definition helios_vector_types.h:849
    +
    helios::RGBcolor::g
    float g
    Green color component.
    Definition helios_vector_types.h:852
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    + +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::int2
    Vector of two elements of type 'int'.
    Definition helios_vector_types.h:44
    +
    helios::int2::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:50
    +
    helios::int2::x
    int x
    First element in vector.
    Definition helios_vector_types.h:48
    +
    helios::int3
    Vector of three elements of type 'int'.
    Definition helios_vector_types.h:146
    +
    helios::int3::x
    int x
    First element in vector.
    Definition helios_vector_types.h:150
    +
    helios::int3::z
    int z
    Third element in vector.
    Definition helios_vector_types.h:154
    +
    helios::int3::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:152
    +
    helios::int4
    Vector of four elements of type 'int'.
    Definition helios_vector_types.h:243
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec2::x
    float x
    First element in vector.
    Definition helios_vector_types.h:350
    +
    helios::vec2::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:352
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
    +
    helios::vec3::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:511
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    +
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition helios_vector_types.h:526
    +
    helios::vec4
    Vector of four elements of type 'float'.
    Definition helios_vector_types.h:673
    +
    jpg_error_mgr
    Definition global.cpp:1743
    +
    my_error_mgr
    Definition Visualizer.cpp:43
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/global_8h.html b/doc/html/global_8h.html index 5710eccbd..fd0ac6402 100644 --- a/doc/html/global_8h.html +++ b/doc/html/global_8h.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    Data Structures | @@ -131,429 +143,429 @@ - + - +

    Macros

    #define DEPRECATED(func)   func
    #define DEPRECATED(func)
     
    #define M_PI   3.14159265358979323846
    #define M_PI   3.14159265358979323846
     
    - +

    Typedefs

    typedef unsigned int uint
    typedef unsigned int uint
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Functions

    void helios::helios_runtime_error (const std::string &error_message)
    void helios::helios_runtime_error (const std::string &error_message)
     Function to throw a runtime error.
     
    void helios::makeRotationMatrix (float rotation, const char *axis, float(&transform)[16])
    void helios::makeRotationMatrix (float rotation, const char *axis, float(&transform)[16])
     Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
     
    void helios::makeRotationMatrix (float rotation, const helios::vec3 &axis, float(&transform)[16])
    void helios::makeRotationMatrix (float rotation, const helios::vec3 &axis, float(&transform)[16])
     Construct a rotation matrix to perform rotation about an arbitrary axis passing through the origin.
     
    void helios::makeRotationMatrix (float rotation, const helios::vec3 &origin, const helios::vec3 &axis, float(&transform)[16])
    void helios::makeRotationMatrix (float rotation, const helios::vec3 &origin, const helios::vec3 &axis, float(&transform)[16])
     Construct a rotation matrix to perform rotation about an arbitrary line (not necessarily passing through the origin).
     
    void helios::makeTranslationMatrix (const helios::vec3 &translation, float(&transform)[16])
    void helios::makeTranslationMatrix (const helios::vec3 &translation, float(&transform)[16])
     Construct translation matrix.
     
    void helios::makeScaleMatrix (const helios::vec3 &scale, float(&T)[16])
    void helios::makeScaleMatrix (const helios::vec3 &scale, float(&T)[16])
     Construct matrix to scale about the origin.
     
    void helios::makeScaleMatrix (const helios::vec3 &scale, const helios::vec3 &point, float(&T)[16])
    void helios::makeScaleMatrix (const helios::vec3 &scale, const helios::vec3 &point, float(&T)[16])
     Construct matrix to scale about arbitrary point in space.
     
    void helios::matmult (const float ML[16], const float MR[16], float(&T)[16])
    void helios::matmult (const float ML[16], const float MR[16], float(&T)[16])
     Multiply 4x4 matrices: T=ML*MR.
     
    void helios::vecmult (const float M[16], const float v[3], float(&result)[3])
    void helios::vecmult (const float M[16], const float v[3], float(&result)[3])
     Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
     
    void helios::vecmult (const float M[16], const helios::vec3 &v3, helios::vec3 &result)
    void helios::vecmult (const float M[16], const helios::vec3 &v3, helios::vec3 &result)
     Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
     
    void helios::makeIdentityMatrix (float(&T)[16])
    void helios::makeIdentityMatrix (float(&T)[16])
     Construct an identity matrix.
     
    float helios::deg2rad (float deg)
    float helios::deg2rad (float deg)
     Convert degrees to radians.
     
    float helios::rad2deg (float rad)
    float helios::rad2deg (float rad)
     Convert radians to degrees.
     
    float helios::atan2_2pi (float y, float x)
    float helios::atan2_2pi (float y, float x)
     Four quadrant arc tangent between 0 and 2*pi.
     
    SphericalCoord helios::cart2sphere (const vec3 &Cartesian)
    SphericalCoord helios::cart2sphere (const vec3 &Cartesian)
     Convert Cartesian coordinates to spherical coordinates.
     
    vec3 helios::sphere2cart (const SphericalCoord &Spherical)
    vec3 helios::sphere2cart (const SphericalCoord &Spherical)
     Convert Spherical coordinates to Cartesian coordinates.
     
    vec2 helios::string2vec2 (const char *str)
    vec2 helios::string2vec2 (const char *str)
     Convert a space-delimited string into a vec2 vector.
     
    vec3 helios::string2vec3 (const char *str)
    vec3 helios::string2vec3 (const char *str)
     Convert a space-delimited string into a vec3 vector.
     
    vec4 helios::string2vec4 (const char *str)
    vec4 helios::string2vec4 (const char *str)
     Convert a space-delimited string into a vec4 vector.
     
    int2 helios::string2int2 (const char *str)
    int2 helios::string2int2 (const char *str)
     Convert a space-delimited string into an int2 vector.
     
    int3 helios::string2int3 (const char *str)
    int3 helios::string2int3 (const char *str)
     Convert a space-delimited string into an int3 vector.
     
    int4 helios::string2int4 (const char *str)
    int4 helios::string2int4 (const char *str)
     Convert a space-delimited string into an int4 vector.
     
    bool helios::parse_float (const std::string &input_string, float &converted_float)
    bool helios::parse_float (const std::string &input_string, float &converted_float)
     Convert a string into a float with error checking.
     
    bool helios::parse_double (const std::string &input_string, double &converted_double)
    bool helios::parse_double (const std::string &input_string, double &converted_double)
     Convert a string into a double with error checking.
     
    bool helios::parse_int (const std::string &input_string, int &converted_int)
    bool helios::parse_int (const std::string &input_string, int &converted_int)
     Convert a string into an integer with error checking.
     
    bool helios::parse_int2 (const std::string &input_string, int2 &converted_int2)
    bool helios::parse_int2 (const std::string &input_string, int2 &converted_int2)
     Convert a string into an int2 with error checking.
     
    bool helios::parse_int3 (const std::string &input_string, int3 &converted_int3)
    bool helios::parse_int3 (const std::string &input_string, int3 &converted_int3)
     Convert a string into an int3 with error checking.
     
    bool helios::parse_uint (const std::string &input_string, uint &converted_uint)
    bool helios::parse_uint (const std::string &input_string, uint &converted_uint)
     Convert a string into an unsigned integer with error checking.
     
    bool helios::parse_vec2 (const std::string &input_string, vec2 &converted_vec2)
    bool helios::parse_vec2 (const std::string &input_string, vec2 &converted_vec2)
     Convert a string into a vec2 with error checking.
     
    bool helios::parse_vec3 (const std::string &input_string, vec3 &converted_vec3)
    bool helios::parse_vec3 (const std::string &input_string, vec3 &converted_vec3)
     Convert a string into a vec3 with error checking.
     
    bool helios::parse_RGBcolor (const std::string &input_string, RGBcolor &converted_rgb)
    bool helios::parse_RGBcolor (const std::string &input_string, RGBcolor &converted_rgb)
     Convert a string into an RGBcolor with error checking.
     
    bool helios::open_xml_file (const std::string &xml_file, pugi::xml_document &xmldoc, std::string &error_string)
    bool helios::open_xml_file (const std::string &xml_file, pugi::xml_document &xmldoc, std::string &error_string)
     
    int helios::parse_xml_tag_int (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    int helios::parse_xml_tag_int (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
     Parse an XML tag containing an integer value.
     
    float helios::parse_xml_tag_float (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    float helios::parse_xml_tag_float (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
     Parse an XML tag containing a float value.
     
    vec2 helios::parse_xml_tag_vec2 (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    vec2 helios::parse_xml_tag_vec2 (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
     Parse an XML tag containing a vec2 value (i.e., two space delimited floats)
     
    vec3 helios::parse_xml_tag_vec3 (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    vec3 helios::parse_xml_tag_vec3 (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
     Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
     
    std::string helios::parse_xml_tag_string (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    std::string helios::parse_xml_tag_string (const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
     Parse an XML tag containing a string.
     
    RGBAcolor helios::string2RGBcolor (const char *str)
    RGBAcolor helios::string2RGBcolor (const char *str)
     Convert a space-delimited string into an RGBcolor vector.
     
    std::string helios::deblank (const char *input)
    std::string helios::deblank (const char *input)
     Remove all whitespace from character array.
     
    std::string helios::deblank (const std::string &input)
    std::string helios::deblank (const std::string &input)
     Remove all whitespace from a string.
     
    std::string helios::trim_whitespace (const std::string &input)
    std::string helios::trim_whitespace (const std::string &input)
     Remove leading and trailing whitespace from a string.
     
    std::vector< std::string > helios::separate_string_by_delimiter (const std::string &inputstring, const std::string &delimiter)
    std::vector< std::string > helios::separate_string_by_delimiter (const std::string &inputstring, const std::string &delimiter)
     Separate string by delimiter and store into a vector.
     
    template<typename anytype >
    anytype helios::clamp (anytype value, anytype min, anytype max)
    template<typename anytype >
    anytype helios::clamp (anytype value, anytype min, anytype max)
     Clamp value to be within some specified bounds.
     
    float helios::sum (const std::vector< float > &vect)
    float helios::sum (const std::vector< float > &vect)
     Sum of a vector of floats.
     
    float helios::mean (const std::vector< float > &vect)
    float helios::mean (const std::vector< float > &vect)
     Mean value of a vector of floats.
     
    float helios::min (const std::vector< float > &vect)
    float helios::min (const std::vector< float > &vect)
     Minimum value of a vector of floats.
     
    int helios::min (const std::vector< int > &vect)
    int helios::min (const std::vector< int > &vect)
     Minimum value of a vector of ints.
     
    vec3 helios::min (const std::vector< vec3 > &vect)
    vec3 helios::min (const std::vector< vec3 > &vect)
     Minimum value of a vector of vec3's.
     
    float helios::max (const std::vector< float > &vect)
    float helios::max (const std::vector< float > &vect)
     Maximum value of a vector of floats.
     
    int helios::max (const std::vector< int > &vect)
    int helios::max (const std::vector< int > &vect)
     Maximum value of a vector of ints.
     
    vec3 helios::max (const std::vector< vec3 > &vect)
    vec3 helios::max (const std::vector< vec3 > &vect)
     Maximum value of a vector of vec3's.
     
    float helios::stdev (const std::vector< float > &vect)
    float helios::stdev (const std::vector< float > &vect)
     Standard deviation of a vector of floats.
     
    float helios::median (std::vector< float > vect)
    float helios::median (std::vector< float > vect)
     Median of a vector of floats.
     
    template<typename anytype >
    template<typename anytype >
    void helios::resize_vector (std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
     Resize 2D C++ vector.
     
    template<typename anytype >
    template<typename anytype >
    void helios::resize_vector (std::vector< std::vector< std::vector< anytype > > > &vec, uint Nx, uint Ny, uint Nz)
     Resize 3D C++ vector.
     
    template<typename anytype >
    template<typename anytype >
    void helios::resize_vector (std::vector< std::vector< std::vector< std::vector< anytype > > > > &vec, uint Nx, uint Ny, uint Nz, uint Nw)
     Resize 4D C++ vector.
     
    RGBcolor helios::blend (const RGBcolor &color0, const RGBcolor &color1, float weight)
    RGBcolor helios::blend (const RGBcolor &color0, const RGBcolor &color1, float weight)
     Blend two RGB colors together.
     
    RGBAcolor helios::blend (const RGBAcolor &color0, const RGBAcolor &color1, float weight)
    RGBAcolor helios::blend (const RGBAcolor &color0, const RGBAcolor &color1, float weight)
     Blend two RGBA colors together.
     
    vec3 helios::rotatePoint (const vec3 &position, const SphericalCoord &rotation)
    vec3 helios::rotatePoint (const vec3 &position, const SphericalCoord &rotation)
     Function to rotate a 3D vector given spherical angles elevation and azimuth.
     
    vec3 helios::rotatePoint (const vec3 &position, float theta, float phi)
    vec3 helios::rotatePoint (const vec3 &position, float theta, float phi)
     Function to rotate a 3D vector given spherical angles elevation and azimuth.
     
    vec3 helios::rotatePointAboutLine (const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    vec3 helios::rotatePointAboutLine (const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
     Rotate a 3D vector about an arbitrary line.
     
    float helios::calculateTriangleArea (const vec3 &v0, const vec3 &v1, const vec3 &v2)
    float helios::calculateTriangleArea (const vec3 &v0, const vec3 &v1, const vec3 &v2)
     Calculate the area of a triangle given its three vertices.
     
    Date helios::CalendarDay (int Julian_day, int year)
    Date helios::CalendarDay (int Julian_day, int year)
     Convert Julian day to calendar day (day,month,year)
     
    int helios::JulianDay (int day, int month, int year)
    int helios::JulianDay (int day, int month, int year)
     Convert calendar day (day,month,year) to Julian day.
     
    int helios::JulianDay (const Date &date)
    int helios::JulianDay (const Date &date)
     Convert calendar day (day,month,year) to Julian day.
     
    float helios::randu ()
    float helios::randu ()
     Random number from a uniform distribution between 0 and 1.
     
    int helios::randu (int imin, int imax)
    int helios::randu (int imin, int imax)
     Random integer from a uniform distribution between imin and imax.
     
    float helios::acos_safe (float x)
    float helios::acos_safe (float x)
     arccosine function to handle cases when round-off errors cause an argument <-1 or >1, and thus regular acos() returns NaN
     
    float helios::asin_safe (float x)
    float helios::asin_safe (float x)
     arcsine function to handle cases when round-off errors cause an argument <-1 or >1, and thus regular asin() returns NaN
     
    bool helios::lineIntersection (const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
    bool helios::lineIntersection (const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
     Determine if two line segments intersect. The lines segments are defined by vertices (p1,q1) and (p2,q2)
     
    bool helios::pointInPolygon (const vec2 &point, const std::vector< vec2 > &polygon_verts)
    bool helios::pointInPolygon (const vec2 &point, const std::vector< vec2 > &polygon_verts)
     Determine whether point lines within a polygon.
     
    void helios::wait (float seconds)
    void helios::wait (float seconds)
     Wait/sleep for a specified amount of time.
     
    bool helios::PNGHasAlpha (const char *filename)
    bool helios::PNGHasAlpha (const char *filename)
     Check whether PNG image file has an alpha/transparency channel.
     
    std::vector< std::vector< bool > > helios::readPNGAlpha (const std::string &filename)
    std::vector< std::vector< bool > > helios::readPNGAlpha (const std::string &filename)
     Function to read the alpha channel from a PNG image.
     
    void helios::readPNG (const std::string &filename, uint &width, uint &height, std::vector< helios::RGBAcolor > &pixel_data)
    void helios::readPNG (const std::string &filename, uint &width, uint &height, std::vector< helios::RGBAcolor > &pixel_data)
     Function to read a PNG image file into pixel data array.
     
    void helios::writePNG (const std::string &filename, uint width, uint height, const std::vector< helios::RGBAcolor > &pixel_data)
    void helios::writePNG (const std::string &filename, uint width, uint height, const std::vector< helios::RGBAcolor > &pixel_data)
     Function to write a PNG image based on pixel data.
     
    void helios::readJPEG (const std::string &filename, uint &width, uint &height, std::vector< helios::RGBcolor > &pixel_data)
    void helios::readJPEG (const std::string &filename, uint &width, uint &height, std::vector< helios::RGBcolor > &pixel_data)
     Function to read a JPEG image file into pixel data array.
     
    helios::int2 helios::getImageResolutionJPEG (const std::string &filename)
    helios::int2 helios::getImageResolutionJPEG (const std::string &filename)
     Function to read a JPEG image file into pixel data array.
     
    void helios::writeJPEG (const std::string &filename, uint width, uint height, const std::vector< helios::RGBcolor > &pixel_data)
    void helios::writeJPEG (const std::string &filename, uint width, uint height, const std::vector< helios::RGBcolor > &pixel_data)
     Function to write a JPEG image based on pixel data.
     
    std::vector< int > helios::flatten (const std::vector< std::vector< int > > &vec)
    std::vector< int > helios::flatten (const std::vector< std::vector< int > > &vec)
     Function to flatten a 2D int vector into a 1D vector.
     
    std::vector< uint > helios::flatten (const std::vector< std::vector< uint > > &vec)
    std::vector< uint > helios::flatten (const std::vector< std::vector< uint > > &vec)
     Function to flatten a 2D uint &vector into a 1D vector.
     
    std::vector< float > helios::flatten (const std::vector< std::vector< float > > &vec)
    std::vector< float > helios::flatten (const std::vector< std::vector< float > > &vec)
     Function to flatten a 2D float vector into a 1D vector.
     
    std::vector< double > helios::flatten (const std::vector< std::vector< double > > &vec)
    std::vector< double > helios::flatten (const std::vector< std::vector< double > > &vec)
     Function to flatten a 2D double vector into a 1D vector.
     
    std::vector< helios::vec2 > helios::flatten (const std::vector< std::vector< helios::vec2 > > &vec)
    std::vector< helios::vec2 > helios::flatten (const std::vector< std::vector< helios::vec2 > > &vec)
     Function to flatten a 2D vec2 vector into a 1D vector.
     
    std::vector< helios::vec3 > helios::flatten (const std::vector< std::vector< helios::vec3 > > &vec)
    std::vector< helios::vec3 > helios::flatten (const std::vector< std::vector< helios::vec3 > > &vec)
     Function to flatten a 2D vec3 vector into a 1D vector.
     
    std::vector< helios::vec4 > helios::flatten (const std::vector< std::vector< helios::vec4 > > &vec)
    std::vector< helios::vec4 > helios::flatten (const std::vector< std::vector< helios::vec4 > > &vec)
     Function to flatten a 2D vec4 vector into a 1D vector.
     
    std::vector< helios::int2 > helios::flatten (const std::vector< std::vector< helios::int2 > > &vec)
    std::vector< helios::int2 > helios::flatten (const std::vector< std::vector< helios::int2 > > &vec)
     Function to flatten a 2D int2 vector into a 1D vector.
     
    std::vector< helios::int3 > helios::flatten (const std::vector< std::vector< helios::int3 > > &vec)
    std::vector< helios::int3 > helios::flatten (const std::vector< std::vector< helios::int3 > > &vec)
     Function to flatten a 2D int3 vector into a 1D vector.
     
    std::vector< helios::int4 > helios::flatten (const std::vector< std::vector< helios::int4 > > &vec)
    std::vector< helios::int4 > helios::flatten (const std::vector< std::vector< helios::int4 > > &vec)
     Function to flatten a 2D int4 vector into a 1D vector.
     
    std::vector< std::string > helios::flatten (const std::vector< std::vector< std::string > > &vec)
    std::vector< std::string > helios::flatten (const std::vector< std::vector< std::string > > &vec)
     Function to flatten a 2D string vector into a 1D vector.
     
    std::vector< int > helios::flatten (const std::vector< std::vector< std::vector< int > > > &vec)
    std::vector< int > helios::flatten (const std::vector< std::vector< std::vector< int > > > &vec)
     Function to flatten a 3D int vector into a 1D vector.
     
    std::vector< uint > helios::flatten (const std::vector< std::vector< std::vector< uint > > > &vec)
    std::vector< uint > helios::flatten (const std::vector< std::vector< std::vector< uint > > > &vec)
     Function to flatten a 3D uint vector into a 1D vector.
     
    std::vector< float > helios::flatten (const std::vector< std::vector< std::vector< float > > > &vec)
    std::vector< float > helios::flatten (const std::vector< std::vector< std::vector< float > > > &vec)
     Function to flatten a 3D float vector into a 1D vector.
     
    std::vector< double > helios::flatten (const std::vector< std::vector< std::vector< double > > > &vec)
    std::vector< double > helios::flatten (const std::vector< std::vector< std::vector< double > > > &vec)
     Function to flatten a 3D double vector into a 1D vector.
     
    std::vector< helios::vec2 > helios::flatten (const std::vector< std::vector< std::vector< helios::vec2 > > > &vec)
    std::vector< helios::vec2 > helios::flatten (const std::vector< std::vector< std::vector< helios::vec2 > > > &vec)
     Function to flatten a 3D vec2 vector into a 1D vector.
     
    std::vector< helios::vec3 > helios::flatten (const std::vector< std::vector< std::vector< helios::vec3 > > > &vec)
    std::vector< helios::vec3 > helios::flatten (const std::vector< std::vector< std::vector< helios::vec3 > > > &vec)
     Function to flatten a 3D vec3 vector into a 1D vector.
     
    std::vector< helios::vec4 > helios::flatten (const std::vector< std::vector< std::vector< helios::vec4 > > > &vec)
    std::vector< helios::vec4 > helios::flatten (const std::vector< std::vector< std::vector< helios::vec4 > > > &vec)
     Function to flatten a 3D vec4 vector into a 1D vector.
     
    std::vector< helios::int2 > helios::flatten (const std::vector< std::vector< std::vector< helios::int2 > > > &vec)
    std::vector< helios::int2 > helios::flatten (const std::vector< std::vector< std::vector< helios::int2 > > > &vec)
     Function to flatten a 3D int2 vector into a 1D vector.
     
    std::vector< helios::int3 > helios::flatten (const std::vector< std::vector< std::vector< helios::int3 > > > &vec)
    std::vector< helios::int3 > helios::flatten (const std::vector< std::vector< std::vector< helios::int3 > > > &vec)
     Function to flatten a 3D int3 vector into a 1D vector.
     
    std::vector< helios::int4 > helios::flatten (const std::vector< std::vector< std::vector< helios::int4 > > > &vec)
    std::vector< helios::int4 > helios::flatten (const std::vector< std::vector< std::vector< helios::int4 > > > &vec)
     Function to flatten a 3D int4 vector into a 1D vector.
     
    std::vector< std::string > helios::flatten (const std::vector< std::vector< std::vector< std::string > > > &vec)
    std::vector< std::string > helios::flatten (const std::vector< std::vector< std::vector< std::string > > > &vec)
     Function to flatten a 3D string vector into a 1D vector.
     
    std::vector< int > helios::flatten (const std::vector< std::vector< std::vector< std::vector< int > > > > &vec)
    std::vector< int > helios::flatten (const std::vector< std::vector< std::vector< std::vector< int > > > > &vec)
     Function to flatten a 4D int vector into a 1D vector.
     
    std::vector< uint > helios::flatten (const std::vector< std::vector< std::vector< std::vector< uint > > > > &vec)
    std::vector< uint > helios::flatten (const std::vector< std::vector< std::vector< std::vector< uint > > > > &vec)
     Function to flatten a 4D uint vector into a 1D vector.
     
    std::vector< float > helios::flatten (const std::vector< std::vector< std::vector< std::vector< float > > > > &vec)
    std::vector< float > helios::flatten (const std::vector< std::vector< std::vector< std::vector< float > > > > &vec)
     Function to flatten a 4D float vector into a 1D vector.
     
    std::vector< double > helios::flatten (const std::vector< std::vector< std::vector< std::vector< double > > > > &vec)
    std::vector< double > helios::flatten (const std::vector< std::vector< std::vector< std::vector< double > > > > &vec)
     Function to flatten a 4D double vector into a 1D vector.
     
    std::vector< helios::vec2 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::vec2 > > > > &vec)
    std::vector< helios::vec2 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::vec2 > > > > &vec)
     Function to flatten a 4D vec2 vector into a 1D vector.
     
    std::vector< helios::vec3 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::vec3 > > > > &vec)
    std::vector< helios::vec3 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::vec3 > > > > &vec)
     Function to flatten a 4D vec3 vector into a 1D vector.
     
    std::vector< helios::vec4 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::vec4 > > > > &vec)
    std::vector< helios::vec4 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::vec4 > > > > &vec)
     Function to flatten a 4D vec4 vector into a 1D vector.
     
    std::vector< helios::int2 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::int2 > > > > &vec)
    std::vector< helios::int2 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::int2 > > > > &vec)
     Function to flatten a 4D int2 vector into a 1D vector.
     
    std::vector< helios::int3 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::int3 > > > > &vec)
    std::vector< helios::int3 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::int3 > > > > &vec)
     Function to flatten a 4D int3 vector into a 1D vector.
     
    std::vector< helios::int4 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::int4 > > > > &vec)
    std::vector< helios::int4 > helios::flatten (const std::vector< std::vector< std::vector< std::vector< helios::int4 > > > > &vec)
     Function to flatten a 4D int4 vector into a 1D vector.
     
    std::vector< std::string > helios::flatten (const std::vector< std::vector< std::vector< std::vector< std::string > > > > &vec)
    std::vector< std::string > helios::flatten (const std::vector< std::vector< std::vector< std::vector< std::string > > > > &vec)
     Function to flatten a 4D string vector into a 1D vector.
     
    helios::vec3 helios::spline_interp3 (float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    helios::vec3 helios::spline_interp3 (float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
     Function to perform cubic Hermite spline interpolation.
     
    float helios::XMLloadfloat (pugi::xml_node node, const char *field)
    float helios::XMLloadfloat (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a float.
     
    int helios::XMLloadint (pugi::xml_node node, const char *field)
    int helios::XMLloadint (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into an int.
     
    std::string helios::XMLloadstring (pugi::xml_node node, const char *field)
    std::string helios::XMLloadstring (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a string.
     
    helios::vec2 helios::XMLloadvec2 (pugi::xml_node node, const char *field)
    helios::vec2 helios::XMLloadvec2 (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a vec2.
     
    helios::vec3 helios::XMLloadvec3 (pugi::xml_node node, const char *field)
    helios::vec3 helios::XMLloadvec3 (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a vec3.
     
    helios::vec4 helios::XMLloadvec4 (pugi::xml_node node, const char *field)
    helios::vec4 helios::XMLloadvec4 (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a vec4.
     
    helios::int2 helios::XMLloadint2 (pugi::xml_node node, const char *field)
    helios::int2 helios::XMLloadint2 (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a vec2.
     
    helios::int3 helios::XMLloadint3 (pugi::xml_node node, const char *field)
    helios::int3 helios::XMLloadint3 (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a int3.
     
    helios::int4 helios::XMLloadint4 (pugi::xml_node node, const char *field)
    helios::int4 helios::XMLloadint4 (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into a int4.
     
    helios::RGBcolor helios::XMLloadrgb (pugi::xml_node node, const char *field)
    helios::RGBcolor helios::XMLloadrgb (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into an RGB color vector.
     
    helios::RGBAcolor helios::XMLloadrgba (pugi::xml_node node, const char *field)
    helios::RGBAcolor helios::XMLloadrgba (pugi::xml_node node, const char *field)
     Function to load and convert a field in a pugi XML node into an RGBA color vector.
     
    float helios::fzero (float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
    float helios::fzero (float(*function)(float value, std::vector< float > &variables, const void *parameters), std::vector< float > &variables, const void *parameters, float init_guess, float err_tol=0.0001f, int max_iterations=100)
     Use Newton-Raphson method to find the zero of a function.
     
    float helios::interp1 (const std::vector< helios::vec2 > &points, float x)
    float helios::interp1 (const std::vector< helios::vec2 > &points, float x)
     Function to perform linear interpolation based on a vector of discrete (x,y) values.
     
    float helios::point_distance (const helios::vec3 &p1, const helios::vec3 &p2)
    float helios::point_distance (const helios::vec3 &p1, const helios::vec3 &p2)
     Function to calculate the distance between two points.
     
    std::string helios::getFileExtension (const std::string &filepath)
    std::string helios::getFileExtension (const std::string &filepath)
     Parse a file string to get the extension.
     
    std::string helios::getFileStem (const std::string &filepath)
    std::string helios::getFileStem (const std::string &filepath)
     Parse a file string to get the filename without extension.
     
    std::string helios::getFileName (const std::string &filepath)
    std::string helios::getFileName (const std::string &filepath)
     Parse a file string to get the filename including extension.
     
    std::string helios::getFilePath (const std::string &filepath, bool trailingslash=true)
    std::string helios::getFilePath (const std::string &filepath, bool trailingslash=true)
     Parse a file string to get the path (i.e., portion of the string before the file name).
     
    bool helios::validateOutputPath (std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
    bool helios::validateOutputPath (std::string &output_directory, const std::vector< std::string > &allowable_file_extensions={})
     Check whether output file and/or directory is valid. Add a trailing slash if it is a directory.
     
    std::vector< float > helios::importVectorFromFile (const std::string &filepath)
    std::vector< float > helios::importVectorFromFile (const std::string &filepath)
     Read values contained in a text file into a one-dimensional vector of floats.
     
    - + - + - +

    Variables

    constexpr float PI_F = 3.14159265358979323846f
    constexpr float PI_F = 3.14159265358979323846f
     
    SphericalCoord helios::nullrotation = make_SphericalCoord(0,0)
    SphericalCoord helios::nullrotation = make_SphericalCoord(0,0)
     Default null SphericalCoord that applies no rotation.
     
    vec3 helios::nullorigin = make_vec3(0,0,0)
    vec3 helios::nullorigin = make_vec3(0,0,0)
     Default null vec3 that gives the origin (0,0,0)
     
    @@ -574,13 +586,13 @@

    #define DEPRECATED ( -   - func) -    func + func) +

    - +Value:
    func
    +

    Definition at line 22 of file global.h.

    @@ -628,25 +640,17 @@

    RGBAcolor helios::blend ( - const RGBAcolor &  - color0, + const RGBAcolor & color0, - const RGBAcolor &  - color1, + const RGBAcolor & color1, - float  - weight_RGBA  - - - - ) - + float weight_RGBA )

    @@ -677,25 +681,17 @@

    RGBcolor helios::blend ( - const RGBcolor &  - color0_RGB, + const RGBcolor & color0_RGB, - const RGBcolor &  - color1_RGB, + const RGBcolor & color1_RGB, - float  - weight_RGB  - - - - ) - + float weight_RGB )

    @@ -726,19 +722,12 @@

    Date helios::CalendarDay ( - int  - Julian_day, + int Julian_day, - int  - year  - - - - ) - + int year )

    @@ -767,43 +756,32 @@

    float helios::fzero ( - float(*)(float value, std::vector< float > &variables, const void *parameters)  - function, + float(* function )(float value, std::vector< float > &variables, const void *parameters), - std::vector< float > &  - variables, + std::vector< float > & variables, - const void *  - parameters, + const void * parameters, - float  - init_guess, + float init_guess, - float  - err_tol = 0.0001f, + float err_tol = 0.0001f, - int  - max_iterations = 100  - - - - ) - + int max_iterations = 100 )

    @@ -834,8 +812,7 @@

    std::string helios::getFileExtension ( - const std::string &  - filepath) + const std::string & filepath) @@ -864,8 +841,7 @@

    std::string helios::getFileName ( - const std::string &  - filepath) + const std::string & filepath) @@ -894,19 +870,12 @@

    std::string helios::getFilePath ( - const std::string &  - filepath, + const std::string & filepath, - bool  - trailingslash = true  - - - - ) - + bool trailingslash = true )

    @@ -935,8 +904,7 @@

    std::string helios::getFileStem ( - const std::string &  - filepath) + const std::string & filepath) @@ -965,8 +933,7 @@

    helios::int2 helios::getImageResolutionJPEG ( - const std::string &  - filename) + const std::string & filename) @@ -993,8 +960,7 @@

    void helios::helios_runtime_error ( - const std::string &  - error_message) + const std::string & error_message) @@ -1021,8 +987,7 @@

    std::vector< float > helios::importVectorFromFile ( - const std::string &  - filepath) + const std::string & filepath) @@ -1050,19 +1015,12 @@

    float helios::interp1 ( - const std::vector< helios::vec2 > &  - points, + const std::vector< helios::vec2 > & points, - float  - x  - - - - ) - + float x )

    @@ -1090,25 +1048,17 @@

    int helios::JulianDay ( - int  - day, + int day, - int  - month, + int month, - int  - year  - - - - ) - + int year )

    @@ -1138,8 +1088,7 @@

    void helios::makeIdentityMatrix ( - float(&)  - T[16]) + float(&) T[16]) @@ -1160,25 +1109,17 @@

    void helios::matmult ( - const float  - ML[16], + const float ML[16], - const float  - MR[16], + const float MR[16], - float(&)  - T[16]  - - - - ) - + float(&) T[16] )

    @@ -1198,25 +1139,17 @@

    bool helios::open_xml_file ( - const std::string &  - xml_file, + const std::string & xml_file, - pugi::xml_document &  - xmldoc, + pugi::xml_document & xmldoc, - std::string &  - error_string  - - - - ) - + std::string & error_string )

    @@ -1234,19 +1167,12 @@

    bool helios::parse_double ( - const std::string &  - input_string, + const std::string & input_string, - double &  - converted_double  - - - - ) - + double & converted_double )

    @@ -1274,19 +1200,12 @@

    bool helios::parse_float ( - const std::string &  - input_string, + const std::string & input_string, - float &  - converted_float  - - - - ) - + float & converted_float )

    @@ -1314,19 +1233,12 @@

    bool helios::parse_int ( - const std::string &  - input_string, + const std::string & input_string, - int &  - converted_int  - - - - ) - + int & converted_int )

    @@ -1354,19 +1266,12 @@

    bool helios::parse_int2 ( - const std::string &  - input_string, + const std::string & input_string, - int2 &  - converted_int2  - - - - ) - + int2 & converted_int2 )

    @@ -1394,19 +1299,12 @@

    bool helios::parse_int3 ( - const std::string &  - input_string, + const std::string & input_string, - int3 &  - converted_int3  - - - - ) - + int3 & converted_int3 )

    @@ -1434,19 +1332,12 @@

    bool helios::parse_RGBcolor ( - const std::string &  - input_string, + const std::string & input_string, - RGBcolor &  - converted_rgb  - - - - ) - + RGBcolor & converted_rgb )

    @@ -1474,19 +1365,12 @@

    bool helios::parse_uint ( - const std::string &  - input_string, + const std::string & input_string, - uint &  - converted_uint  - - - - ) - + uint & converted_uint )

    @@ -1514,19 +1398,12 @@

    bool helios::parse_vec2 ( - const std::string &  - input_string, + const std::string & input_string, - vec2 &  - converted_vec2  - - - - ) - + vec2 & converted_vec2 )

    @@ -1554,19 +1431,12 @@

    bool helios::parse_vec3 ( - const std::string &  - input_string, + const std::string & input_string, - vec3 &  - converted_vec3  - - - - ) - + vec3 & converted_vec3 )

    @@ -1594,25 +1464,17 @@

    float helios::parse_xml_tag_float ( - const pugi::xml_node &  - node, + const pugi::xml_node & node, - const std::string &  - tag, + const std::string & tag, - const std::string &  - calling_function  - - - - ) - + const std::string & calling_function )

    @@ -1641,25 +1503,17 @@

    int helios::parse_xml_tag_int ( - const pugi::xml_node &  - node, + const pugi::xml_node & node, - const std::string &  - tag, + const std::string & tag, - const std::string &  - calling_function  - - - - ) - + const std::string & calling_function )

    @@ -1688,25 +1542,17 @@

    std::string helios::parse_xml_tag_string ( - const pugi::xml_node &  - node, + const pugi::xml_node & node, - const std::string &  - tag, + const std::string & tag, - const std::string &  - calling_function  - - - - ) - + const std::string & calling_function )

    @@ -1735,25 +1581,17 @@

    vec2 helios::parse_xml_tag_vec2 ( - const pugi::xml_node &  - node, + const pugi::xml_node & node, - const std::string &  - tag, + const std::string & tag, - const std::string &  - calling_function  - - - - ) - + const std::string & calling_function )

    @@ -1782,25 +1620,17 @@

    vec3 helios::parse_xml_tag_vec3 ( - const pugi::xml_node &  - node, + const pugi::xml_node & node, - const std::string &  - tag, + const std::string & tag, - const std::string &  - calling_function  - - - - ) - + const std::string & calling_function )

    @@ -1829,8 +1659,7 @@

    bool helios::PNGHasAlpha ( - const char *  - filename) + const char * filename) @@ -1857,19 +1686,12 @@

    float helios::point_distance ( - const helios::vec3 &  - p1, + const helios::vec3 & p1, - const helios::vec3 &  - p2  - - - - ) - + const helios::vec3 & p2 )

    @@ -1897,31 +1719,22 @@

    void helios::readJPEG ( - const std::string &  - filename, + const std::string & filename, - uint &  - width, + uint & width, - uint &  - height, + uint & height, - std::vector< helios::RGBcolor > &  - pixel_data  - - - - ) - + std::vector< helios::RGBcolor > & pixel_data )

    @@ -1950,31 +1763,22 @@

    void helios::readPNG ( - const std::string &  - filename, + const std::string & filename, - uint &  - width, + uint & width, - uint &  - height, + uint & height, - std::vector< helios::RGBAcolor > &  - pixel_data  - - - - ) - + std::vector< helios::RGBAcolor > & pixel_data )

    @@ -2003,8 +1807,7 @@

    std::vector< std::vector< bool > > helios::readPNGAlpha ( - const std::string &  - filename) + const std::string & filename) @@ -2032,31 +1835,22 @@

    vec3 helios::rotatePointAboutLine ( - const vec3 &  - point, + const vec3 & point, - const vec3 &  - line_base, + const vec3 & line_base, - const vec3 &  - line_direction, + const vec3 & line_direction, - float  - theta  - - - - ) - + float theta )

    @@ -2085,19 +1879,12 @@

    bool helios::validateOutputPath ( - std::string &  - output_directory, + std::string & output_directory, - const std::vector< std::string > &  - allowable_file_extensions = {}  - - - - ) - + const std::vector< std::string > & allowable_file_extensions = {} )

    @@ -2125,25 +1912,17 @@

    void helios::vecmult ( - const float  - M[16], + const float M[16], - const float  - v[3], + const float v[3], - float(&)  - result[3]  - - - - ) - + float(&) result[3] )

    @@ -2163,25 +1942,17 @@

    void helios::vecmult ( - const float  - M[16], + const float M[16], - const helios::vec3 &  - v3, + const helios::vec3 & v3, - helios::vec3 &  - result  - - - - ) - + helios::vec3 & result )

    @@ -2201,31 +1972,22 @@

    void helios::writeJPEG ( - const std::string &  - filename, + const std::string & filename, - uint  - width, + uint width, - uint  - height, + uint height, - const std::vector< helios::RGBcolor > &  - pixel_data  - - - - ) - + const std::vector< helios::RGBcolor > & pixel_data )

    @@ -2254,31 +2016,22 @@

    void helios::writePNG ( - const std::string &  - filename, + const std::string & filename, - uint  - width, + uint width, - uint  - height, + uint height, - const std::vector< helios::RGBAcolor > &  - pixel_data  - - - - ) - + const std::vector< helios::RGBAcolor > & pixel_data )

    @@ -2307,19 +2060,12 @@

    float helios::XMLloadfloat ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2346,19 +2092,12 @@

    int helios::XMLloadint ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2385,19 +2124,12 @@

    helios::int2 helios::XMLloadint2 ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2424,19 +2156,12 @@

    helios::int3 helios::XMLloadint3 ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2463,19 +2188,12 @@

    helios::int4 helios::XMLloadint4 ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2502,19 +2220,12 @@

    helios::RGBcolor helios::XMLloadrgb ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2541,19 +2252,12 @@

    helios::RGBAcolor helios::XMLloadrgba ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2580,19 +2284,12 @@

    std::string helios::XMLloadstring ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2619,19 +2316,12 @@

    helios::vec2 helios::XMLloadvec2 ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2658,19 +2348,12 @@

    helios::vec3 helios::XMLloadvec3 ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2697,19 +2380,12 @@

    helios::vec4 helios::XMLloadvec4 ( - pugi::xml_node  - node, + pugi::xml_node node, - const char *  - field  - - - - ) - + const char * field )

    @@ -2790,24 +2466,25 @@

    - +
    constexpr float PI_F = 3.14159265358979323846ffloat PI_F = 3.14159265358979323846f
    -inlineconstexpr +constexpr

    -

    Definition at line 29 of file global.h.

    +

    Definition at line 32 of file global.h.

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/global_8h_source.html b/doc/html/global_8h_source.html index 6cdaa927a..0aefff803 100644 --- a/doc/html/global_8h_source.html +++ b/doc/html/global_8h_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    global.h
    @@ -98,7 +110,7 @@
    18#elif defined(_MSC_VER)
    19#define DEPRECATED(func) __declspec(deprecated) func
    20#else
    -
    21#pragma message("WARNING: You need to implement DEPRECATED for this compiler")
    +
    21#pragma message("WARNING: You need to implement DEPRECATED for this compiler")
    22#define DEPRECATED(func) func
    23#endif
    24
    @@ -106,10 +118,10 @@
    26#define M_PI 3.14159265358979323846
    27#endif
    28
    -
    29inline constexpr float PI_F = 3.14159265358979323846f;
    -
    30
    -
    31#ifndef HELIOS_GLOBAL
    -
    32#define HELIOS_GLOBAL
    +
    29#ifndef HELIOS_GLOBAL
    +
    30#define HELIOS_GLOBAL
    +
    31
    +
    32constexpr float PI_F = 3.14159265358979323846f;
    33
    34#include <cstdlib>
    35#include <cstdio>
    @@ -362,6 +374,7 @@
    613 bool pointInPolygon(const vec2 &point, const std::vector<vec2> &polygon_verts );
    614
    616
    +
    619 struct Timer{
    620 public:
    621
    @@ -369,16 +382,21 @@
    623 running=false;
    624 }
    625
    +
    627 void tic(){
    628 timer_start = std::chrono::high_resolution_clock::now();
    629 running = true;
    630 };
    +
    631
    +
    633 double toc() const{
    634 return toc("");
    635 }
    +
    636
    638
    +
    641 double toc( const char* message ) const {
    642 if (!running) {
    643 std::cerr << "ERROR (Timer): You must call `tic' before calling `toc'. Ignoring call to `toc'..." << std::endl;
    @@ -392,6 +410,7 @@
    651 }
    652 return duration;
    653 }
    +
    654
    655 private:
    656
    @@ -399,6 +418,7 @@
    658 std::chrono::high_resolution_clock::time_point timer_start;
    659
    660 };
    +
    661
    663
    667 void wait( float seconds );
    @@ -595,84 +615,85 @@
    1098}
    1099
    1100#endif
    -
    helios::parse_double
    bool parse_double(const std::string &input_string, double &converted_double)
    Convert a string into a double with error checking.
    Definition: global.cpp:779
    -
    helios::parse_xml_tag_float
    float parse_xml_tag_float(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a float value.
    Definition: global.cpp:954
    -
    helios::rotatePointAboutLine
    vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    Rotate a 3D vector about an arbitrary line.
    Definition: global.cpp:140
    -
    helios::importVectorFromFile
    std::vector< float > importVectorFromFile(const std::string &filepath)
    Read values contained in a text file into a one-dimensional vector of floats.
    Definition: global.cpp:3150
    -
    helios::parse_int2
    bool parse_int2(const std::string &input_string, int2 &converted_int2)
    Convert a string into an int2 with error checking.
    Definition: global.cpp:809
    -
    helios::parse_float
    bool parse_float(const std::string &input_string, float &converted_float)
    Convert a string into a float with error checking.
    Definition: global.cpp:763
    -
    helios::blend
    RGBcolor blend(const RGBcolor &color0, const RGBcolor &color1, float weight)
    Blend two RGB colors together.
    Definition: global.cpp:60
    -
    helios::parse_xml_tag_vec3
    vec3 parse_xml_tag_vec3(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
    Definition: global.cpp:978
    -
    helios::matmult
    void matmult(const float ML[16], const float MR[16], float(&T)[16])
    Multiply 4x4 matrices: T=ML*MR.
    Definition: global.cpp:499
    -
    helios::parse_vec3
    bool parse_vec3(const std::string &input_string, vec3 &converted_vec3)
    Convert a string into a vec3 with error checking.
    Definition: global.cpp:876
    -
    helios::CalendarDay
    Date CalendarDay(int Julian_day, int year)
    Convert Julian day to calendar day (day,month,year)
    Definition: global.cpp:1307
    -
    helios::parse_vec2
    bool parse_vec2(const std::string &input_string, vec2 &converted_vec2)
    Convert a string into a vec2 with error checking.
    Definition: global.cpp:860
    -
    helios::parse_uint
    bool parse_uint(const std::string &input_string, uint &converted_uint)
    Convert a string into an unsigned integer with error checking.
    Definition: global.cpp:842
    -
    helios::helios_runtime_error
    void helios_runtime_error(const std::string &error_message)
    Function to throw a runtime error.
    Definition: global.cpp:29
    -
    helios::parse_int
    bool parse_int(const std::string &input_string, int &converted_int)
    Convert a string into an integer with error checking.
    Definition: global.cpp:794
    -
    helios::parse_xml_tag_vec2
    vec2 parse_xml_tag_vec2(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec2 value (i.e., two space delimited floats)
    Definition: global.cpp:966
    -
    helios::parse_RGBcolor
    bool parse_RGBcolor(const std::string &input_string, RGBcolor &converted_rgb)
    Convert a string into an RGBcolor with error checking.
    Definition: global.cpp:893
    -
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition: global.cpp:1350
    -
    helios::nullorigin
    vec3 nullorigin
    Default null vec3 that gives the origin (0,0,0)
    Definition: global.cpp:58
    -
    helios::parse_int3
    bool parse_int3(const std::string &input_string, int3 &converted_int3)
    Convert a string into an int3 with error checking.
    Definition: global.cpp:825
    -
    helios::parse_xml_tag_string
    std::string parse_xml_tag_string(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a string.
    Definition: global.cpp:990
    -
    helios::makeIdentityMatrix
    void makeIdentityMatrix(float(&T)[16])
    Construct an identity matrix.
    Definition: global.cpp:555
    -
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition: global.cpp:57
    -
    helios::vecmult
    void vecmult(const float M[16], const float v[3], float(&result)[3])
    Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
    Definition: global.cpp:539
    -
    helios::parse_xml_tag_int
    int parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing an integer value.
    Definition: global.cpp:942
    -
    helios::randu
    float randu()
    Random number from a uniform distribution between 0 and 1.
    Definition: global.cpp:223
    -
    helios::rad2deg
    float rad2deg(float rad)
    Convert radians to degrees.
    Definition: global.cpp:580
    -
    helios::flatten
    std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
    Function to flatten a 2D int vector into a 1D vector.
    Definition: global.cpp:1943
    -
    helios::rotatePoint
    vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
    Function to rotate a 3D vector given spherical angles elevation and azimuth.
    Definition: global.cpp:79
    -
    helios::string2vec2
    vec2 string2vec2(const char *str)
    Convert a space-delimited string into a vec2 vector.
    Definition: global.cpp:623
    -
    helios::string2int2
    int2 string2int2(const char *str)
    Convert a space-delimited string into an int2 vector.
    Definition: global.cpp:683
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::atan2_2pi
    float atan2_2pi(float y, float x)
    Four quadrant arc tangent between 0 and 2*pi.
    Definition: global.cpp:584
    -
    helios::lineIntersection
    bool lineIntersection(const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
    Determine if two line segments intersect. The lines segments are defined by vertices (p1,...
    Definition: global.cpp:253
    -
    helios::makeRotationMatrix
    void makeRotationMatrix(float rotation, const char *axis, float(&transform)[16])
    Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
    Definition: global.cpp:313
    -
    helios::median
    float median(std::vector< float > vect)
    Median of a vector of floats.
    Definition: global.cpp:1214
    -
    helios::string2int4
    int4 string2int4(const char *str)
    Convert a space-delimited string into an int4 vector.
    Definition: global.cpp:723
    -
    helios::min
    float min(const std::vector< float > &vect)
    Minimum value of a vector of floats.
    Definition: global.cpp:1100
    -
    helios::trim_whitespace
    std::string trim_whitespace(const std::string &input)
    Remove leading and trailing whitespace from a string.
    Definition: global.cpp:1016
    -
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition: global.cpp:576
    -
    helios::string2vec3
    vec3 string2vec3(const char *str)
    Convert a space-delimited string into a vec3 vector.
    Definition: global.cpp:643
    -
    helios::makeTranslationMatrix
    void makeTranslationMatrix(const helios::vec3 &translation, float(&transform)[16])
    Construct translation matrix.
    Definition: global.cpp:436
    -
    helios::calculateTriangleArea
    float calculateTriangleArea(const vec3 &v0, const vec3 &v1, const vec3 &v2)
    Calculate the area of a triangle given its three vertices.
    Definition: global.cpp:175
    -
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition: global.cpp:2768
    -
    helios::string2RGBcolor
    RGBAcolor string2RGBcolor(const char *str)
    Convert a space-delimited string into an RGBcolor vector.
    Definition: global.cpp:743
    -
    helios::max
    float max(const std::vector< float > &vect)
    Maximum value of a vector of floats.
    Definition: global.cpp:1146
    -
    helios::stdev
    float stdev(const std::vector< float > &vect)
    Standard deviation of a vector of floats.
    Definition: global.cpp:1192
    -
    helios::resize_vector
    void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
    Resize 2D C++ vector.
    Definition: global.cpp:1239
    -
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition: global.cpp:617
    -
    helios::makeScaleMatrix
    void makeScaleMatrix(const helios::vec3 &scale, float(&T)[16])
    Construct matrix to scale about the origin.
    Definition: global.cpp:457
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::sum
    float sum(const std::vector< float > &vect)
    Sum of a vector of floats.
    Definition: global.cpp:1069
    -
    helios::pointInPolygon
    bool pointInPolygon(const vec2 &point, const std::vector< vec2 > &polygon_verts)
    Determine whether point lines within a polygon.
    Definition: global.cpp:276
    -
    helios::asin_safe
    float asin_safe(float x)
    arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:247
    -
    helios::string2int3
    int3 string2int3(const char *str)
    Convert a space-delimited string into an int3 vector.
    Definition: global.cpp:703
    -
    helios::wait
    void wait(float seconds)
    Wait/sleep for a specified amount of time.
    Definition: global.cpp:306
    -
    helios::deblank
    std::string deblank(const char *input)
    Remove all whitespace from character array.
    Definition: global.cpp:994
    -
    helios::string2vec4
    vec4 string2vec4(const char *str)
    Convert a space-delimited string into a vec4 vector.
    Definition: global.cpp:663
    -
    helios::mean
    float mean(const std::vector< float > &vect)
    Mean value of a vector of floats.
    Definition: global.cpp:1084
    -
    helios::separate_string_by_delimiter
    std::vector< std::string > separate_string_by_delimiter(const std::string &inputstring, const std::string &delimiter)
    Separate string by delimiter and store into a vector.
    Definition: global.cpp:1032
    -
    helios::clamp
    anytype clamp(anytype value, anytype min, anytype max)
    Clamp value to be within some specified bounds.
    Definition: global.cpp:1055
    +
    helios::parse_double
    bool parse_double(const std::string &input_string, double &converted_double)
    Convert a string into a double with error checking.
    Definition global.cpp:779
    +
    helios::parse_xml_tag_float
    float parse_xml_tag_float(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a float value.
    Definition global.cpp:954
    +
    helios::rotatePointAboutLine
    vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    Rotate a 3D vector about an arbitrary line.
    Definition global.cpp:140
    +
    helios::importVectorFromFile
    std::vector< float > importVectorFromFile(const std::string &filepath)
    Read values contained in a text file into a one-dimensional vector of floats.
    Definition global.cpp:3150
    +
    helios::parse_int2
    bool parse_int2(const std::string &input_string, int2 &converted_int2)
    Convert a string into an int2 with error checking.
    Definition global.cpp:809
    +
    helios::parse_float
    bool parse_float(const std::string &input_string, float &converted_float)
    Convert a string into a float with error checking.
    Definition global.cpp:763
    +
    helios::blend
    RGBcolor blend(const RGBcolor &color0, const RGBcolor &color1, float weight)
    Blend two RGB colors together.
    Definition global.cpp:60
    +
    helios::parse_xml_tag_vec3
    vec3 parse_xml_tag_vec3(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec3 value (i.e., three space delimited floats)
    Definition global.cpp:978
    +
    helios::matmult
    void matmult(const float ML[16], const float MR[16], float(&T)[16])
    Multiply 4x4 matrices: T=ML*MR.
    Definition global.cpp:499
    +
    helios::parse_vec3
    bool parse_vec3(const std::string &input_string, vec3 &converted_vec3)
    Convert a string into a vec3 with error checking.
    Definition global.cpp:876
    +
    helios::CalendarDay
    Date CalendarDay(int Julian_day, int year)
    Convert Julian day to calendar day (day,month,year)
    Definition global.cpp:1307
    +
    helios::parse_vec2
    bool parse_vec2(const std::string &input_string, vec2 &converted_vec2)
    Convert a string into a vec2 with error checking.
    Definition global.cpp:860
    +
    helios::parse_uint
    bool parse_uint(const std::string &input_string, uint &converted_uint)
    Convert a string into an unsigned integer with error checking.
    Definition global.cpp:842
    +
    helios::helios_runtime_error
    void helios_runtime_error(const std::string &error_message)
    Function to throw a runtime error.
    Definition global.cpp:29
    +
    helios::parse_int
    bool parse_int(const std::string &input_string, int &converted_int)
    Convert a string into an integer with error checking.
    Definition global.cpp:794
    +
    helios::parse_xml_tag_vec2
    vec2 parse_xml_tag_vec2(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a vec2 value (i.e., two space delimited floats)
    Definition global.cpp:966
    +
    helios::parse_RGBcolor
    bool parse_RGBcolor(const std::string &input_string, RGBcolor &converted_rgb)
    Convert a string into an RGBcolor with error checking.
    Definition global.cpp:893
    +
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition global.cpp:1350
    +
    helios::nullorigin
    vec3 nullorigin
    Default null vec3 that gives the origin (0,0,0)
    Definition global.cpp:58
    +
    helios::parse_int3
    bool parse_int3(const std::string &input_string, int3 &converted_int3)
    Convert a string into an int3 with error checking.
    Definition global.cpp:825
    +
    helios::parse_xml_tag_string
    std::string parse_xml_tag_string(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing a string.
    Definition global.cpp:990
    +
    helios::makeIdentityMatrix
    void makeIdentityMatrix(float(&T)[16])
    Construct an identity matrix.
    Definition global.cpp:555
    +
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition global.cpp:57
    +
    helios::vecmult
    void vecmult(const float M[16], const float v[3], float(&result)[3])
    Multiply 4x4 transformation matrix by 3-element vector: T=M*v.
    Definition global.cpp:539
    +
    helios::parse_xml_tag_int
    int parse_xml_tag_int(const pugi::xml_node &node, const std::string &tag, const std::string &calling_function)
    Parse an XML tag containing an integer value.
    Definition global.cpp:942
    +
    helios::randu
    float randu()
    Random number from a uniform distribution between 0 and 1.
    Definition global.cpp:223
    +
    helios::rad2deg
    float rad2deg(float rad)
    Convert radians to degrees.
    Definition global.cpp:580
    +
    helios::flatten
    std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
    Function to flatten a 2D int vector into a 1D vector.
    Definition global.cpp:1943
    +
    helios::rotatePoint
    vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
    Function to rotate a 3D vector given spherical angles elevation and azimuth.
    Definition global.cpp:79
    +
    helios::string2vec2
    vec2 string2vec2(const char *str)
    Convert a space-delimited string into a vec2 vector.
    Definition global.cpp:623
    +
    helios::string2int2
    int2 string2int2(const char *str)
    Convert a space-delimited string into an int2 vector.
    Definition global.cpp:683
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::atan2_2pi
    float atan2_2pi(float y, float x)
    Four quadrant arc tangent between 0 and 2*pi.
    Definition global.cpp:584
    +
    helios::lineIntersection
    bool lineIntersection(const vec2 &p1, const vec2 &q1, const vec2 &p2, const vec2 &q2)
    Determine if two line segments intersect. The lines segments are defined by vertices (p1,...
    Definition global.cpp:253
    +
    helios::makeRotationMatrix
    void makeRotationMatrix(float rotation, const char *axis, float(&transform)[16])
    Construct a rotation matrix to perform rotation about the x-, y-, or z-axis.
    Definition global.cpp:313
    +
    helios::median
    float median(std::vector< float > vect)
    Median of a vector of floats.
    Definition global.cpp:1214
    +
    helios::string2int4
    int4 string2int4(const char *str)
    Convert a space-delimited string into an int4 vector.
    Definition global.cpp:723
    +
    helios::min
    float min(const std::vector< float > &vect)
    Minimum value of a vector of floats.
    Definition global.cpp:1100
    +
    helios::trim_whitespace
    std::string trim_whitespace(const std::string &input)
    Remove leading and trailing whitespace from a string.
    Definition global.cpp:1016
    +
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition global.cpp:576
    +
    helios::string2vec3
    vec3 string2vec3(const char *str)
    Convert a space-delimited string into a vec3 vector.
    Definition global.cpp:643
    +
    helios::makeTranslationMatrix
    void makeTranslationMatrix(const helios::vec3 &translation, float(&transform)[16])
    Construct translation matrix.
    Definition global.cpp:436
    +
    helios::calculateTriangleArea
    float calculateTriangleArea(const vec3 &v0, const vec3 &v1, const vec3 &v2)
    Calculate the area of a triangle given its three vertices.
    Definition global.cpp:175
    +
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition global.cpp:2768
    +
    helios::string2RGBcolor
    RGBAcolor string2RGBcolor(const char *str)
    Convert a space-delimited string into an RGBcolor vector.
    Definition global.cpp:743
    +
    helios::max
    float max(const std::vector< float > &vect)
    Maximum value of a vector of floats.
    Definition global.cpp:1146
    +
    helios::stdev
    float stdev(const std::vector< float > &vect)
    Standard deviation of a vector of floats.
    Definition global.cpp:1192
    +
    helios::resize_vector
    void resize_vector(std::vector< std::vector< anytype > > &vec, uint Nx, uint Ny)
    Resize 2D C++ vector.
    Definition global.cpp:1239
    +
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition global.cpp:617
    +
    helios::makeScaleMatrix
    void makeScaleMatrix(const helios::vec3 &scale, float(&T)[16])
    Construct matrix to scale about the origin.
    Definition global.cpp:457
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::sum
    float sum(const std::vector< float > &vect)
    Sum of a vector of floats.
    Definition global.cpp:1069
    +
    helios::pointInPolygon
    bool pointInPolygon(const vec2 &point, const std::vector< vec2 > &polygon_verts)
    Determine whether point lines within a polygon.
    Definition global.cpp:276
    +
    helios::asin_safe
    float asin_safe(float x)
    arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:247
    +
    helios::string2int3
    int3 string2int3(const char *str)
    Convert a space-delimited string into an int3 vector.
    Definition global.cpp:703
    +
    helios::wait
    void wait(float seconds)
    Wait/sleep for a specified amount of time.
    Definition global.cpp:306
    +
    helios::deblank
    std::string deblank(const char *input)
    Remove all whitespace from character array.
    Definition global.cpp:994
    +
    helios::string2vec4
    vec4 string2vec4(const char *str)
    Convert a space-delimited string into a vec4 vector.
    Definition global.cpp:663
    +
    helios::mean
    float mean(const std::vector< float > &vect)
    Mean value of a vector of floats.
    Definition global.cpp:1084
    +
    helios::separate_string_by_delimiter
    std::vector< std::string > separate_string_by_delimiter(const std::string &inputstring, const std::string &delimiter)
    Separate string by delimiter and store into a vector.
    Definition global.cpp:1032
    +
    helios::clamp
    anytype clamp(anytype value, anytype min, anytype max)
    Clamp value to be within some specified bounds.
    Definition global.cpp:1055
    helios_vector_types.h
    -
    helios::RGBAcolor
    R-G-B-A color vector.
    Definition: helios_vector_types.h:1024
    -
    helios::RGBcolor
    R-G-B color vector.
    Definition: helios_vector_types.h:844
    -
    helios::Timer
    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration.
    Definition: global.h:619
    -
    helios::Timer::toc
    double toc(const char *message) const
    Stop timer and print elapsed time and a user-defined message.
    Definition: global.h:641
    -
    helios::Timer::tic
    void tic()
    Start timer.
    Definition: global.h:627
    -
    helios::Timer::toc
    double toc() const
    Stop timer and print elapsed time.
    Definition: global.h:633
    -
    helios::int2
    Vector of two elements of type 'int'.
    Definition: helios_vector_types.h:44
    -
    helios::int3
    Vector of three elements of type 'int'.
    Definition: helios_vector_types.h:146
    -
    helios::int4
    Vector of four elements of type 'int'.
    Definition: helios_vector_types.h:243
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec4
    Vector of four elements of type 'float'.
    Definition: helios_vector_types.h:673
    +
    helios::RGBAcolor
    R-G-B-A color vector.
    Definition helios_vector_types.h:1024
    +
    helios::RGBcolor
    R-G-B color vector.
    Definition helios_vector_types.h:844
    +
    helios::Timer
    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration.
    Definition global.h:619
    +
    helios::Timer::toc
    double toc(const char *message) const
    Stop timer and print elapsed time and a user-defined message.
    Definition global.h:641
    +
    helios::Timer::tic
    void tic()
    Start timer.
    Definition global.h:627
    +
    helios::Timer::toc
    double toc() const
    Stop timer and print elapsed time.
    Definition global.h:633
    +
    helios::int2
    Vector of two elements of type 'int'.
    Definition helios_vector_types.h:44
    +
    helios::int3
    Vector of three elements of type 'int'.
    Definition helios_vector_types.h:146
    +
    helios::int4
    Vector of four elements of type 'int'.
    Definition helios_vector_types.h:243
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec4
    Vector of four elements of type 'float'.
    Definition helios_vector_types.h:673
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/globals.html b/doc/html/globals.html index 1f56e24cb..8c8ecccd7 100644 --- a/doc/html/globals.html +++ b/doc/html/globals.html @@ -38,31 +38,43 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    - b -

    +

    - c -

    + +

    - d -

    +
    helios_vector_types.h
    @@ -114,6 +126,7 @@
    38namespace helios{
    39
    41
    +
    44struct int2{
    45public:
    46
    @@ -123,6 +136,7 @@
    53 /* initializes to zero */
    54 int2() : x(0), y(0) {}
    55
    +
    57 explicit int2( const std::vector<int> &v ){
    58 if( v.size()!=2){
    59 throw(std::runtime_error("ERROR: vector for initialization of int2 must have length 2."));
    @@ -130,6 +144,7 @@
    61 x=v[0];
    62 y=v[1];
    63 }
    +
    65 explicit int2( const int v[2] ) : x(v[0]), y(v[1]) {}
    66
    68 int2( int v0, int v1 ) : x(v0), y(v1) {}
    @@ -143,55 +158,77 @@
    82 bool operator!=( const int2& a ) const;
    84 int2 operator-() const;
    85
    +
    87 friend std::ostream &operator<<(std::ostream &os, const helios::int2 &vec) {
    88 return os << "helios::int2<" << vec.x << ", " << vec.y << ">";
    89 }
    +
    90
    91};
    +
    92
    94
    +
    99inline int2 make_int2( int x, int y ){
    100 return {x,y};
    101}
    +
    102
    104
    +
    108inline int2 make_int2( int X[2] ){
    109 return {X[0],X[1]};
    110}
    +
    111
    +
    112inline int2 int2::operator+(const int2& a) const{
    113 return {a.x+x, a.y+y};
    114}
    +
    115
    +
    116inline int2& int2::operator+=(const int2& a){
    117 this->x += a.x;
    118 this->y += a.y;
    119 return *this;
    120}
    +
    121
    +
    122inline int2& int2::operator-=(const int2& a){
    123 this->x -= a.x;
    124 this->y -= a.y;
    125 return *this;
    126}
    +
    127
    +
    128inline int2 int2::operator-(const int2& a) const{
    129 return {x-a.x, y-a.y};
    130}
    +
    131
    +
    132inline bool int2::operator==( const int2& a ) const{
    133 return a.x==x && a.y==y;
    134}
    +
    135
    +
    136inline bool int2::operator!=( const int2& a ) const{
    137 return a.x!=x || a.y!=y;
    138}
    +
    139
    +
    140inline int2 int2::operator-() const{
    141 return {-x,-y};
    142}
    +
    143
    145
    +
    146struct int3{
    147public:
    148
    @@ -202,6 +239,7 @@
    157 /* initializes to zero */
    158 int3() : x(0), y(0), z(0) {}
    159
    +
    161 explicit int3( const std::vector<int> &v ){
    162 if( v.size()!=3){
    163 throw(std::runtime_error("ERROR: vector for initialization of int3 must have length 3."));
    @@ -210,6 +248,7 @@
    166 y=v[1];
    167 z=v[2];
    168 }
    +
    170 explicit int3( const int v[3] ) : x(v[0]), y(v[1]), z(v[2]) {}
    171
    173 int3( int v0, int v1, int v2 ) : x(v0), y(v1), z(v2) {}
    @@ -222,55 +261,77 @@
    186 bool operator!=( const int3& a ) const;
    188 int3 operator-() const;
    189
    +
    191 friend std::ostream &operator<<(std::ostream &os, const helios::int3 &vec) {
    192 return os << "helios::int3<" << vec.x << ", " << vec.y << ", " << vec.z << ">";
    193 }
    +
    194
    195};
    +
    196
    +
    198inline int3 make_int3( int X, int Y, int Z ){
    199 return {X,Y,Z};
    200}
    +
    201
    +
    203inline int3 make_int3( int X[3] ){
    204 return {X[0],X[1],X[2]};
    205}
    +
    206
    +
    207inline int3 int3::operator+(const int3& a) const{
    208 return {a.x+x, a.y+y, a.z+z};
    209}
    +
    210
    +
    211inline int3& int3::operator+=(const int3& a){
    212 this->x += a.x;
    213 this->y += a.y;
    214 this->z += a.z;
    215 return *this;
    216}
    +
    217
    +
    218inline int3& int3::operator-=(const int3& a){
    219 this->x -= a.x;
    220 this->y -= a.y;
    221 this->z -= a.z;
    222 return *this;
    223}
    +
    224
    +
    225inline int3 int3::operator-(const int3& a) const{
    226 return {x-a.x, y-a.y, z-a.z};
    227}
    +
    228
    +
    229inline bool int3::operator==( const int3& a ) const{
    230 return a.x==x && a.y==y && a.z==z;
    231}
    +
    232
    +
    233inline bool int3::operator!=( const int3& a ) const{
    234 return a.x!=x || a.y!=y || a.z!=z;
    235}
    +
    236
    +
    237inline int3 int3::operator-() const{
    238 return {-x,-y,-z};
    239}
    +
    240
    242
    +
    243struct int4{
    244public:
    245
    @@ -282,6 +343,7 @@
    256 /* initializes to zero */
    257 int4() : x(0), y(0), z(0), w(0) {}
    258
    +
    260 explicit int4( const std::vector<int> &v ){
    261 if( v.size()!=4){
    262 throw(std::runtime_error("ERROR: vector for initialization of int4 must have length 4."));
    @@ -291,6 +353,7 @@
    266 z=v[2];
    267 w=v[3];
    268 }
    +
    269
    271 explicit int4( const int v[3] ) : x(v[0]), y(v[1]), z(v[2]), w(v[3]) {}
    272
    @@ -304,24 +367,34 @@
    287 bool operator!=( const int4& a ) const;
    289 int4 operator-() const;
    290
    +
    292 friend std::ostream &operator<<(std::ostream &os, const helios::int4 &vec) {
    293 return os << "helios::int4<" << vec.x << ", " << vec.y << ", " << vec.z << ", " << vec.w << ">";
    294 }
    +
    295
    296};
    +
    297
    +
    299 inline int4 make_int4(int x, int y, int z, int w ){
    300 return {x, y, z, w};
    301 }
    +
    302
    +
    304inline int4 make_int4( const int X[4] ){
    305 return {X[0],X[1],X[2],X[3]};
    306}
    +
    307
    +
    308inline int4 int4::operator+(const int4& a) const{
    309 return {a.x+x, a.y+y, a.z+z, a.w+w};
    310}
    +
    311
    +
    312inline int4& int4::operator+=(const int4& a){
    313 this->x += a.x;
    314 this->y += a.y;
    @@ -329,7 +402,9 @@
    316 this->w += a.w;
    317 return *this;
    318}
    +
    319
    +
    320inline int4& int4::operator-=(const int4& a){
    321 this->x -= a.x;
    322 this->y -= a.y;
    @@ -337,45 +412,60 @@
    324 this->w -= a.w;
    325 return *this;
    326}
    +
    327
    +
    328inline int4 int4::operator-(const int4& a) const{
    329 return {a.x-x, a.y-y, a.z-z, a.w-w};
    330}
    +
    331
    +
    332inline bool int4::operator==( const int4& a ) const{
    333 return a.x==x && a.y==y && a.z==z && a.w==w;
    334}
    +
    335
    +
    336inline bool int4::operator!=( const int4& a ) const{
    337 return a.x!=x || a.y!=y || a.z!=z || a.w!=w;
    338}
    +
    339
    +
    340inline int4 int4::operator-() const{
    341 return {-x,-y,-z,-w};
    342}
    +
    343
    345
    +
    346struct vec2{
    347public:
    348
    350 float x;
    352 float y;
    353
    +
    355 vec2 normalize(){
    356 float mag = sqrt( x*x + y*y );
    357 x/=mag;
    358 y/=mag;
    359 return {x,y};
    360 }
    +
    361
    363
    +
    366 [[nodiscard]] float magnitude() const{
    367 return sqrtf( x*x + y*y );
    368 }
    +
    369
    371
    372 vec2() : x(0), y(0) {}
    373
    +
    375 explicit vec2( const std::vector<float> &v ){
    376 if( v.size()!=2){
    377 throw(std::runtime_error("ERROR: vector for initialization of vec2 must have length 2."));
    @@ -383,6 +473,7 @@
    379 x=v.at(0);
    380 y=v.at(1);
    381 }
    +
    383 explicit vec2( const float v[2] ) : x(v[0]), y(v[1]) {}
    384
    386 vec2( float v0, float v1 ) : x(v0), y(v1) {}
    @@ -400,86 +491,122 @@
    409 bool operator!=(const vec2& a) const;
    411 vec2 operator-() const;
    412
    +
    414 friend std::ostream &operator<<(std::ostream &os, const helios::vec2 &vec) {
    415 return os << "helios::vec2<" << vec.x << ", " << vec.y << ">";
    416 }
    +
    417
    418};
    +
    419
    421vec2 operator*( float a, const vec2& v);
    423vec2 operator+( float a, const vec2& v);
    425vec2 operator-( float a, const vec2& v);
    426
    428
    +
    433inline vec2 make_vec2(float x, float y ){
    434 return {x, y};
    435}
    +
    436
    +
    437inline float vec2::operator*(const vec2& a) const{
    438 return a.x*x+a.y*y;
    439}
    +
    440
    +
    441inline vec2 vec2::operator+(const vec2& a) const{
    442 return {a.x+x,a.y+y};
    443}
    +
    444
    +
    445inline vec2& vec2::operator+=(const vec2& a){
    446 this->x += a.x;
    447 this->y += a.y;
    448 return *this;
    449}
    +
    450
    +
    451inline vec2& vec2::operator-=(const vec2& a){
    452 this->x -= a.x;
    453 this->y -= a.y;
    454 return *this;
    455}
    +
    456
    +
    457inline vec2 vec2::operator+(const float a) const {
    458 return {a+x, a+y};
    459}
    +
    460
    +
    461inline vec2 operator+(const float a, const vec2& v){
    462 return {a+v.x, a+v.y};
    463}
    +
    464
    +
    465inline vec2 vec2::operator-(const vec2& a) const{
    466 return {x-a.x,y-a.y};
    467}
    +
    468
    +
    469inline vec2 vec2::operator-(const float a) const {
    470 return {x-a, y-a};
    471}
    +
    472
    +
    473inline vec2 operator-(const float a, const vec2& v) {
    474 return {a-v.x, a-v.y};
    475}
    +
    476
    +
    477inline vec2 vec2::operator*(const float a) const{
    478 return {x*a,y*a};
    479}
    +
    480
    +
    481inline vec2 operator*(const float a, const vec2& v) {
    482 return {a * v.x, a * v.y};
    483}
    +
    484
    +
    485inline vec2 vec2::operator/(const float a) const{
    486 return {x/a,y/a};
    487}
    +
    488
    +
    489inline bool vec2::operator==(const vec2& a) const{
    490 return x == a.x && y == a.y;
    491}
    +
    492
    +
    493inline bool vec2::operator!=(const vec2& a) const{
    494 return x != a.x || y != a.y;
    495}
    +
    496
    +
    497inline vec2 vec2::operator-() const{
    498 return {-x,-y};
    499}
    +
    500
    502
    +
    503struct vec3{
    504public:
    505
    @@ -487,6 +614,7 @@
    509 float y;
    511 float z;
    512
    +
    514 vec3 normalize(){
    515 float mag = sqrt( x*x + y*y + z*z );
    516 x/=mag;
    @@ -494,15 +622,19 @@
    518 z/=mag;
    519 return {x,y,z};
    520 }
    +
    521
    523
    +
    526 [[nodiscard]] float magnitude() const{
    527 return sqrtf( x*x + y*y + z*z );
    528 }
    +
    529
    531
    532 vec3() : x(0), y(0), z(0) {}
    533
    +
    535 explicit vec3( const std::vector<float> &v ){
    536 if( v.size()!=3){
    537 throw(std::runtime_error("ERROR: vector for initialization of vec3 must have length 3."));
    @@ -511,6 +643,7 @@
    540 y=v[1];
    541 z=v[2];
    542 }
    +
    544 explicit vec3( const float v[3] ) : x(v[0]), y(v[1]), z(v[2]) {}
    545
    547 vec3( float v0, float v1, float v2 ) : x(v0), y(v1), z(v2) {}
    @@ -528,95 +661,135 @@
    570 bool operator!=(const vec3& a) const;
    572 vec3 operator-() const;
    573
    +
    575 friend std::ostream &operator<<(std::ostream &os, const helios::vec3 &vec) {
    576 return os << "helios::vec3<" << vec.x << ", " << vec.y << ", " << vec.z << ">";
    577 }
    +
    578
    579};
    +
    580
    582vec3 operator*( float a, const vec3& v);
    584vec3 operator+( float a, const vec3& v);
    586vec3 operator-( float a, const vec3& v);
    587
    +
    589inline vec3 make_vec3(float x, float y, float z ){
    590 return {x, y, z};
    591}
    +
    592
    +
    594inline vec3 make_vec3( float X[3] ){
    595 return {X[0],X[1],X[2]};
    596}
    +
    597
    +
    599inline vec3 cross(const vec3 &a, const vec3 &b ){
    600 return {a.y*b.z - b.y*a.z,b.x*a.z - a.x*b.z,a.x*b.y - b.x*a.y };
    601}
    +
    602
    +
    603inline float vec3::operator*(const vec3& a) const{
    604 return a.x*x+a.y*y+a.z*z;
    605}
    +
    606
    +
    607inline vec3 vec3::operator+(const vec3& a) const{
    608 return {a.x+x,a.y+y,a.z+z};
    609}
    +
    610
    +
    611inline vec3& vec3::operator+=(const vec3& a){
    612 this->x += a.x;
    613 this->y += a.y;
    614 this->z += a.z;
    615 return *this;
    616}
    +
    617
    +
    618inline vec3& vec3::operator-=(const vec3& a){
    619 this->x -= a.x;
    620 this->y -= a.y;
    621 this->z -= a.z;
    622 return *this;
    623}
    +
    624
    +
    625inline vec3 vec3::operator+(const float a) const{
    626 return { x+a, y+a, z+a };
    627}
    +
    628
    +
    629inline vec3 operator+(const float a, const vec3& v) {
    630 return {a+v.x, a+v.y, a+v.z};
    631}
    +
    632
    +
    633inline vec3 vec3::operator-(const vec3& a) const{
    634 return {x-a.x,y-a.y,z-a.z};
    635}
    +
    636
    +
    637inline vec3 vec3::operator-(const float a) const{
    638 return { x-a, y-a, z-a };
    639}
    +
    640
    +
    641inline vec3 operator-(const float a, const vec3& v) {
    642 return {a-v.x, a-v.y, a-v.z};
    643}
    +
    644
    +
    645inline vec3 vec3::operator*(const float a) const{
    646 return {x*a,y*a,z*a};
    647}
    +
    648
    +
    649inline vec3 operator*(const float a, const vec3& v) {
    650 return {a * v.x, a * v.y, a * v.z};
    651}
    +
    652
    +
    653inline vec3 vec3::operator/(const float a) const{
    654 return {x/a,y/a,z/a};
    655}
    +
    656
    +
    657inline bool vec3::operator==(const vec3& a) const{
    658 return x == a.x && y == a.y && z == a.z;
    659}
    +
    660
    +
    661inline bool vec3::operator!=(const vec3& a) const{
    662 return x != a.x || y != a.y || z != a.z;
    663}
    +
    664
    +
    665inline vec3 vec3::operator-() const{
    666 return {-x,-y,-z};
    667}
    +
    668
    670
    +
    673struct vec4{
    674public:
    675
    @@ -625,6 +798,7 @@
    681 float z;
    683 float w;
    684
    +
    686 vec4 normalize(){
    687 float mag = sqrt( x*x + y*y + z*z + w*w );
    688 x/=mag;
    @@ -633,15 +807,19 @@
    691 w/=mag;
    692 return {x,y,z,w};
    693 }
    +
    694
    696
    +
    699 [[nodiscard]] float magnitude() const{
    700 return sqrt( x*x + y*y + z*z + w*w );
    701 }
    +
    702
    704
    705 vec4() : x(0), y(0), z(0), w(0) {}
    706
    +
    708 explicit vec4( const std::vector<float> &v ){
    709 if( v.size()!=4){
    710 throw(std::runtime_error("ERROR: vector for initialization of vec4 must have length 4."));
    @@ -651,6 +829,7 @@
    714 z=v[2];
    715 w=v[3];
    716 }
    +
    718 explicit vec4( const float v[4] ) : x(v[0]), y(v[1]), z(v[2]), w(v[3]) {}
    719
    721 vec4( float v0, float v1, float v2, float v3 ) : x(v0), y(v1), z(v2), w(v3) {}
    @@ -668,32 +847,44 @@
    744 bool operator!=(const vec4& a) const;
    746 vec4 operator-() const;
    747
    +
    749 friend std::ostream &operator<<(std::ostream &os, const helios::vec4 &vec) {
    750 return os << "helios::vec4<" << vec.x << ", " << vec.y << ", " << vec.z << ", " << vec.w << ">";
    751 }
    +
    752
    753};
    +
    754
    756vec4 operator*( float a, const vec4& v);
    758vec4 operator+( float a, const vec4& v);
    760vec4 operator-( float a, const vec4& v);
    761
    +
    763 inline vec4 make_vec4( float x, float y, float z, float w ){
    764 return {x, y, z, w};
    765}
    +
    766
    +
    768inline vec4 make_vec4( float X[4] ){
    769 return {X[0],X[1],X[2],X[3]};
    770}
    +
    771
    +
    772inline float vec4::operator*(const vec4& a) const{
    773 return a.x*x+a.y*y+a.z*z+a.w*w;
    774}
    +
    775
    +
    776inline vec4 vec4::operator+(const vec4& a) const{
    777 return {a.x+x,a.y+y,a.z+z,a.w+w};
    778}
    +
    779
    +
    780inline vec4& vec4::operator+=(const vec4& a){
    781 this->x += a.x;
    782 this->y += a.y;
    @@ -701,7 +892,9 @@
    784 this->w += a.w;
    785 return *this;
    786 }
    +
    787
    +
    788inline vec4& vec4::operator-=(const vec4& a){
    789 this->x -= a.x;
    790 this->y -= a.y;
    @@ -709,52 +902,76 @@
    792 this->w -= a.w;
    793 return *this;
    794 }
    +
    795
    +
    796inline vec4 vec4::operator+(const float a) const{
    797 return { x+a, y+a, z+a, w+a };
    798}
    +
    799
    +
    800inline vec4 operator+(const float a, const vec4& v) {
    801 return {a+v.x, a+v.y, a+v.z, a+v.w};
    802}
    +
    803
    +
    804inline vec4 vec4::operator-(const vec4& a) const{
    805 return {x-a.x,y-a.y,z-a.z,w-a.w};
    806}
    +
    807
    +
    808inline vec4 vec4::operator-(const float a) const{
    809 return { x-a, y-a, z-a, w-a };
    810}
    +
    811
    +
    812inline vec4 operator-(const float a, const vec4& v) {
    813 return {a-v.x, a-v.y, a-v.z, a-v.w};
    814}
    +
    815
    +
    816inline vec4 vec4::operator*(const float a) const{
    817 return {x*a,y*a,z*a,w*a};
    818}
    +
    819
    +
    820inline vec4 operator*(const float a, const vec4& v) {
    821 return {a * v.x, a * v.y, a * v.z, a * v.w};
    822}
    +
    823
    +
    824inline vec4 vec4::operator/(const float a) const{
    825 return {x/a,y/a,z/a,w/a};
    826}
    +
    827
    +
    828inline bool vec4::operator==(const vec4& a) const{
    829 return x == a.x && y == a.y && z == a.z && w == a.w;
    830}
    +
    831
    +
    832inline bool vec4::operator!=(const vec4& a) const{
    833 return x != a.x || y != a.y || z != a.z || w != a.w;
    834}
    +
    835
    +
    836inline vec4 vec4::operator-() const{
    837 return {-x,-y,-z, -w};
    838}
    +
    839
    841
    +
    844struct RGBcolor{
    845public:
    846
    @@ -768,18 +985,23 @@
    858 RGBcolor() : r(0), g(0), b(0) {}
    859
    861
    +
    867 RGBcolor( float r, float g, float b ){
    868 this->r=clamp(r);
    869 this->g=clamp(g);
    870 this->b=clamp(b);
    871 }
    +
    873
    +
    877 explicit RGBcolor( const float C[3] ){
    878 r=clamp(C[0]);
    879 g=clamp(C[1]);
    880 b=clamp(C[2]);
    881 }
    +
    883
    +
    887 explicit RGBcolor( const std::vector<float> &C ){
    888 if( C.size()!=3 ){
    889 throw(std::runtime_error("ERROR: cannot initialize RGBcolor using supplied vector - size should be 3."));
    @@ -788,14 +1010,18 @@
    892 g=clamp(C[1]);
    893 b=clamp(C[2]);
    894 }
    +
    896
    +
    900 explicit RGBcolor(const vec3 &C ){
    901 r=clamp(C.x);
    902 g=clamp(C.y);
    903 b=clamp(C.z);
    904 }
    +
    905
    907
    +
    910 void scale( float scale_factor ){
    911 if(scale_factor < 0 ){
    912 throw(std::runtime_error("ERROR (RGBcolor::scale): cannot scale RGBcolor by negative factor."));
    @@ -804,10 +1030,13 @@
    915 g*=scale_factor;
    916 b*=scale_factor;
    917 }
    +
    918
    +
    920 friend std::ostream &operator<<(std::ostream &os, const helios::RGBcolor &c) {
    921 return os << "helios::RGBcolor<" << c.r << ", " << c.g << ", " << c.b << ">";
    922 }
    +
    923
    925 bool operator==( const RGBcolor &c ) const;
    927 bool operator!=( const RGBcolor &c ) const;
    @@ -825,22 +1054,29 @@
    943 }
    944
    945};
    +
    946
    948
    +
    954inline RGBcolor make_RGBcolor( float r, float g, float b ){
    955 return {r,g,b};
    956}
    +
    957
    959
    964RGBcolor blend(const RGBcolor &color0_RGB, const RGBcolor &color1_RGB, float weight_RGB );
    965
    +
    966inline bool RGBcolor::operator==( const RGBcolor &c ) const{
    967 return c.r==r && c.g==g && c.b==b;
    968}
    +
    969
    +
    970inline bool RGBcolor::operator!=( const RGBcolor &c ) const{
    971 return c.r!=r || c.g!=g || c.b!=b;
    972}
    +
    973
    975namespace RGB{
    976
    @@ -868,6 +1104,7 @@
    1018}
    1019
    1021
    +
    1024struct RGBAcolor{
    1025public:
    1026
    @@ -883,20 +1120,25 @@
    1041 RGBAcolor() : r(0), g(0), b(0), a(1) {}
    1042
    1044
    +
    1051 RGBAcolor( float r, float g, float b, float a ){
    1052 this->r=clamp(r);
    1053 this->g=clamp(g);
    1054 this->b=clamp(b);
    1055 this->a=clamp(a);
    1056 }
    +
    1058
    +
    1062 explicit RGBAcolor( const float C[4] ){
    1063 r=clamp(C[0]);
    1064 g=clamp(C[1]);
    1065 b=clamp(C[2]);
    1066 a=clamp(C[3]);
    1067 }
    +
    1069
    +
    1073 explicit RGBAcolor( const std::vector<float> &C ){
    1074 if( C.size()!=4 ){
    1075 throw(std::runtime_error("ERROR: cannot initialize RGBAcolor using supplied vector - size should be 4."));
    @@ -906,8 +1148,10 @@
    1079 b=clamp(C[2]);
    1080 a=clamp(C[3]);
    1081 }
    +
    1082
    1084
    +
    1087 void scale( float scale_factor ){
    1088 if(scale_factor < 0 ){
    1089 throw(std::runtime_error("ERROR (RGBAcolor::scale): cannot scale RGBAcolor by negative factor."));
    @@ -917,10 +1161,13 @@
    1093 b*=scale_factor;
    1094 a*=scale_factor;
    1095 }
    +
    1096
    +
    1098 friend std::ostream &operator<<(std::ostream &os, const helios::RGBAcolor &c) {
    1099 return os << "helios::RGBAcolor<" << c.r << ", " << c.g << ", " << c.b << ", " << c.a << ">";
    1100 }
    +
    1101
    1103 bool operator==( const helios::RGBAcolor &c ) const;
    1105 bool operator!=( const helios::RGBAcolor &c ) const;
    @@ -938,29 +1185,39 @@
    1121 }
    1122
    1123};
    +
    1124
    1126
    +
    1133inline RGBAcolor make_RGBAcolor( float r, float g, float b, float a ){
    1134 return {r,g,b,a};
    1135}
    +
    1136
    1138
    +
    1143inline RGBAcolor make_RGBAcolor( RGBcolor color, float a ){
    1144 return {color.r,color.g,color.b,a};
    1145}
    +
    1146
    1148
    1153RGBAcolor blend(const helios::RGBAcolor &color0_RGBA, const helios::RGBAcolor &color1_RGBA, float weight_RGBA );
    1154
    +
    1155inline bool RGBAcolor::operator==( const RGBAcolor &c ) const{
    1156 return c.r==r && c.g==g && c.b==b && c.a==a;
    1157}
    +
    1158
    +
    1159inline bool RGBAcolor::operator!=( const RGBAcolor &c ) const{
    1160 return c.r!=r || c.g!=g || c.b!=b || c.a!=a;
    1161}
    +
    1162
    1164
    +
    1168struct Date{
    1169public:
    1170
    @@ -968,18 +1225,21 @@
    1174 int month;
    1176 int year;
    1177
    +
    1179 Date(){
    1180 day = 1;
    1181 month = 1;
    1182 year = 2000;
    1183 }
    +
    1184
    1186
    +
    1191 Date(int day, int month, int year ){
    1192
    -
    1193 if(day < 1 || day > 31 ){
    +
    1193 if(day < 1 || day > 31 ){
    1194 throw(std::runtime_error("ERROR (Date constructor): Day of month is out of range (day of " + std::to_string(day) + " was given)."));
    -
    1195 }else if(month < 1 || month > 12){
    +
    1195 }else if(month < 1 || month > 12){
    1196 throw(std::runtime_error("ERROR (Date constructor): Month of year is out of range (month of " + std::to_string(month) + " was given)."));
    1197 }else if( year<1000 ){
    1198 throw(std::runtime_error( "ERROR (Date constructor): Year should be specified in YYYY format."));
    @@ -990,6 +1250,7 @@
    1203 this->year = year;
    1204
    1205 }
    +
    1206
    1208
    1211 [[nodiscard]] int JulianDay() const;
    @@ -1002,13 +1263,17 @@
    1223 bool operator==( const helios::Date &c ) const;
    1225 bool operator!=( const helios::Date &c ) const;
    1226
    +
    1228 friend std::ostream &operator<<(std::ostream &os, helios::Date const &d) {
    1229 return os << d.year << "-" << std::setfill('0') << std::setw(2) << d.month << "-" << std::setfill('0') << std::setw(2) << d.day;
    1230 }
    +
    1231
    1232};
    +
    1233
    1235
    +
    1241inline Date make_Date( int day, int month, int year ){
    1242 if( day<1 || day>31 ){
    1243 throw(std::runtime_error("ERROR (make_Date): Day of month is out of range (day of " + std::to_string(day) + " was given)."));
    @@ -1021,16 +1286,22 @@
    1250 return {day,month,year};
    1251
    1252}
    +
    1253
    +
    1254inline bool Date::operator==( const Date &c ) const{
    1255 return c.day==day && c.month==month && c.year==year;
    1256}
    +
    1257
    +
    1258inline bool Date::operator!=( const Date &c ) const{
    1259 return c.day!=day || c.month!=month || c.year!=year;
    1260}
    +
    1261
    1263
    +
    1268inline Date Julian2Calendar( int JulianDay, int year ){
    1269
    1270 int day, month;
    @@ -1067,8 +1338,10 @@
    1301 return make_Date(day,month,year);
    1302
    1303}
    +
    1304
    1306
    +
    1310inline int Calendar2Julian( Date date ){
    1311
    1312 int skips_leap[] = {0, 31, 60, 91, 121, 152, 182, 214, 244, 274, 305, 335};
    @@ -1087,8 +1360,10 @@
    1325 return JD;
    1326
    1327}
    +
    1328
    1330
    +
    1335inline Date make_Date( int JulianDay, int year ){
    1336 if( JulianDay<1 || JulianDay>366 ){
    1337 throw(std::runtime_error("ERROR (make_Date): Julian day is out of range (Julian day of " + std::to_string(JulianDay) + " was given)."));
    @@ -1099,27 +1374,32 @@
    1342 return Julian2Calendar(JulianDay,year);
    1343
    1344}
    +
    1345
    1346
    1348
    +
    1352struct Time{
    1353
    1355 int second;
    1357 int minute;
    1359 int hour;
    1360
    +
    1362 Time(){
    1363 second = 0;
    1364 minute = 0;
    1365 hour = 0;
    1366 }
    +
    1367
    1369
    +
    1373 Time( int hour, int minute ){
    1374
    -
    1375 if( minute<0 || minute>59 ){
    +
    1375 if( minute<0 || minute>59 ){
    1376 throw(std::runtime_error("ERROR (Time constructor): Minute out of range (0-59)."));
    -
    1377 }else if( hour<0 || hour>23 ){
    +
    1377 }else if( hour<0 || hour>23 ){
    1378 throw(std::runtime_error("ERROR (Time constructor): Hour out of range (0-23)."));
    1379 }
    1380
    @@ -1128,15 +1408,17 @@
    1383 this->hour = hour;
    1384
    1385 }
    +
    1386
    1388
    +
    1393 Time( int hour, int minute, int second ){
    1394
    -
    1395 if( second<0 || second>59 ){
    +
    1395 if( second<0 || second>59 ){
    1396 throw(std::runtime_error("ERROR (Time constructor): Second out of range (0-59)."));
    -
    1397 }else if( minute<0 || minute>59 ){
    +
    1397 }else if( minute<0 || minute>59 ){
    1398 throw(std::runtime_error("ERROR (Time constructor): Minute out of range (0-59)."));
    -
    1399 }else if( hour<0 || hour>23 ){
    +
    1399 }else if( hour<0 || hour>23 ){
    1400 throw(std::runtime_error("ERROR (Time constructor): Hour out of range (0-23)."));
    1401 }
    1402
    @@ -1145,17 +1427,22 @@
    1405 this->hour = hour;
    1406
    1407 }
    +
    1408
    1410 bool operator==( const helios::Time &c ) const;
    1412 bool operator!=( const helios::Time &c ) const;
    1413
    +
    1415 friend std::ostream &operator<<(std::ostream &os, helios::Time const &t) {
    1416 return os << t.hour << ":" << std::setfill('0') << std::setw(2) << t.minute << ":" << std::setfill('0') << std::setw(2) << t.second;
    1417 }
    +
    1418
    1419};
    +
    1420
    1422
    +
    1427inline Time make_Time( int hour, int minute ){
    1428 if( minute<0 || minute>59 ){
    1429 throw(std::runtime_error("ERROR (make_Time): Minute of " + std::to_string(minute) + " out of range (0-59)."));
    @@ -1166,8 +1453,10 @@
    1434 return {hour,minute,0};
    1435
    1436}
    +
    1437
    1439
    +
    1445inline Time make_Time( int hour, int minute, int second ){
    1446 if( second<0 || second>59 ){
    1447 throw(std::runtime_error("ERROR (make_Time): Second of " + std::to_string(second) + " out of range (0-59)."));
    @@ -1180,29 +1469,38 @@
    1454 return {hour,minute,second};
    1455
    1456}
    +
    1457
    +
    1458inline bool Time::operator==( const Time &c ) const{
    1459 return c.hour==hour && c.minute==minute && c.second==second;
    1460}
    +
    1461
    +
    1462inline bool Time::operator!=( const Time &c ) const{
    1463 return c.hour!=hour || c.minute!=minute || c.second!=second;
    1464}
    +
    1465
    1467
    +
    1470 struct Location{
    1471
    1473 float latitude_deg;
    1475 float longitude_deg;
    1477 float UTC_offset;
    1478
    +
    1480 Location(){
    1481 latitude_deg = 38.55f;
    1482 longitude_deg = 121.76f;
    1483 UTC_offset = 8;
    1484 }
    +
    1485
    1487
    +
    1491 Location( float latitude_deg, float longitude_deg, float UTC_offset ){
    1492
    1493 this->latitude_deg = latitude_deg;
    @@ -1210,30 +1508,41 @@
    1495 this->UTC_offset = UTC_offset;
    1496
    1497 }
    +
    1498
    1500 bool operator==( const helios::Location &c ) const;
    1502 bool operator!=( const helios::Location &c ) const;
    1503
    +
    1505 friend std::ostream &operator<<(std::ostream &os, helios::Location const &t) {
    1506 return os << "<" << t.latitude_deg << "," << t.longitude_deg << "," << t.UTC_offset << ">";
    1507 }
    +
    1508
    1509 };
    +
    1510
    1512
    +
    1518 inline Location make_Location( float latitude_deg, float longitude_deg, float UTC_offset ){
    1519 return {latitude_deg,longitude_deg,UTC_offset};
    1520 }
    +
    1521
    +
    1522 inline bool Location::operator==( const Location &c ) const{
    1523 return c.latitude_deg==latitude_deg && c.longitude_deg==longitude_deg && c.UTC_offset==UTC_offset;
    1524 }
    +
    1525
    +
    1526 inline bool Location::operator!=( const Location &c ) const{
    1527 return c.latitude_deg!=latitude_deg || c.longitude_deg!=longitude_deg || c.UTC_offset!=UTC_offset;
    1528 }
    +
    1529
    1531
    +
    1534struct SphericalCoord{
    1535private:
    1536
    @@ -1254,15 +1563,18 @@
    1555 float azimuth;
    1556
    1558
    +
    1559 SphericalCoord() : elevation_private(0.5f*float(M_PI)), zenith_private(0.f), elevation(elevation_private), zenith(zenith_private) {
    1560 radius=1;
    1561 azimuth=0;
    1562 }
    +
    1564
    1569 SphericalCoord(float radius, float elevation_radians, float azimuth_radians ) : elevation_private(elevation_radians), zenith_private(0.5f * float(M_PI) - elevation_radians), radius(radius), elevation(elevation_private), zenith(zenith_private), azimuth(azimuth_radians) {}
    1570
    1572 SphericalCoord( const SphericalCoord &c ) : elevation_private(c.elevation_private), zenith_private(c.zenith_private), radius(c.radius), elevation(c.elevation_private), zenith(c.zenith_private), azimuth(c.azimuth) {}
    1573
    +
    1575 SphericalCoord& operator=( const SphericalCoord &c ){
    1576 if( this != &c ){
    1577 elevation_private = c.elevation_private;
    @@ -1272,232 +1584,245 @@
    1581 }
    1582 return *this;
    1583 }
    +
    1584
    1586 bool operator==( const helios::SphericalCoord &c ) const;
    1588 bool operator!=( const helios::SphericalCoord &c ) const;
    1589
    +
    1591 friend std::ostream &operator<<(std::ostream &os, helios::SphericalCoord const &coord) {
    1592 return os << "helios::SphericalCoord<" << coord.radius << ", " << coord.elevation << ", " << coord.azimuth << ">";
    1593 }
    +
    1594
    1595};
    +
    1596
    1598
    +
    1602inline SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians ){
    1603 return {1, elevation_radians, azimuth_radians};
    1604}
    +
    1605
    1607
    +
    1612 inline SphericalCoord make_SphericalCoord(float radius, float elevation_radians, float azimuth_radians ){
    1613 return {radius, elevation_radians, azimuth_radians};
    1614}
    +
    1615
    +
    1616inline bool SphericalCoord::operator==( const SphericalCoord &c ) const{
    1617 return c.radius==radius && c.zenith==zenith && c.elevation==elevation && c.azimuth==azimuth;
    1618}
    +
    1619
    +
    1620inline bool SphericalCoord::operator!=( const SphericalCoord &c ) const {
    1621 return c.radius!=radius || c.zenith!=zenith || c.elevation!=elevation || c.azimuth!=azimuth;
    1622}
    +
    1623
    1624
    1625}
    1626
    1627#endif
    -
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition: global.cpp:1350
    -
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition: helios_vector_types.h:99
    -
    helios::make_Time
    Time make_Time(int hour, int minute)
    Make a Time vector.
    Definition: helios_vector_types.h:1427
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_Location
    Location make_Location(float latitude_deg, float longitude_deg, float UTC_offset)
    Make a Location vector.
    Definition: helios_vector_types.h:1518
    -
    helios::make_RGBAcolor
    RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
    Make an RGBAcolor vector.
    Definition: helios_vector_types.h:1133
    -
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition: helios_vector_types.h:1241
    -
    helios::Julian2Calendar
    Date Julian2Calendar(int JulianDay, int year)
    Convert a Julian day to a calendar Date vector.
    Definition: helios_vector_types.h:1268
    -
    helios::Calendar2Julian
    int Calendar2Julian(Date date)
    Convert a calendar Date vector to Julian day.
    Definition: helios_vector_types.h:1310
    -
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition: helios_vector_types.h:954
    -
    helios::operator*
    vec2 operator*(float a, const vec2 &v)
    Multiply each element by scalar (scalar is multiplied on left: a*vec2)
    Definition: helios_vector_types.h:481
    -
    helios::operator-
    vec2 operator-(float a, const vec2 &v)
    Subtract a scalar from each element (scalar is subtracted on left: a-vec2)
    Definition: helios_vector_types.h:473
    -
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition: helios_vector_types.h:198
    -
    helios::operator+
    vec2 operator+(float a, const vec2 &v)
    Add a scalar to each element (scalar is added on left: a+vec2)
    Definition: helios_vector_types.h:461
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition: helios_vector_types.h:599
    -
    helios::make_vec4
    vec4 make_vec4(float x, float y, float z, float w)
    Make a vec4 from three floats.
    Definition: helios_vector_types.h:763
    -
    helios::make_int4
    int4 make_int4(int x, int y, int z, int w)
    Make an int4 vector from three ints.
    Definition: helios_vector_types.h:299
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    - -
    helios::Date::operator==
    bool operator==(const helios::Date &c) const
    check for equality of two dates
    Definition: helios_vector_types.h:1254
    -
    helios::Date::Date
    Date()
    Default constructor.
    Definition: helios_vector_types.h:1179
    -
    helios::Date::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::Date const &d)
    Write Date to output stream.
    Definition: helios_vector_types.h:1228
    -
    helios::Date::month
    int month
    Month of year.
    Definition: helios_vector_types.h:1174
    -
    helios::Date::incrementDay
    void incrementDay()
    Increment Date vector by one day.
    Definition: global.cpp:202
    -
    helios::Date::day
    int day
    Day of month.
    Definition: helios_vector_types.h:1172
    -
    helios::Date::operator!=
    bool operator!=(const helios::Date &c) const
    check for inequality of two Dates
    Definition: helios_vector_types.h:1258
    -
    helios::Date::Date
    Date(int day, int month, int year)
    Day/Month/Year constructor.
    Definition: helios_vector_types.h:1191
    -
    helios::Date::JulianDay
    int JulianDay() const
    Convert to Julian day.
    Definition: global.cpp:186
    -
    helios::Date::isLeapYear
    bool isLeapYear() const
    Check whether it is a leap year.
    Definition: global.cpp:215
    -
    helios::Date::year
    int year
    Year in YYYY format.
    Definition: helios_vector_types.h:1176
    -
    helios::Location
    Location vector.
    Definition: helios_vector_types.h:1470
    -
    helios::Location::Location
    Location()
    Default constructor.
    Definition: helios_vector_types.h:1480
    -
    helios::Location::longitude_deg
    float longitude_deg
    Longitude in degrees (+western hemisphere, -eastern hemisphere)
    Definition: helios_vector_types.h:1475
    -
    helios::Location::operator==
    bool operator==(const helios::Location &c) const
    check for equality of two locations
    Definition: helios_vector_types.h:1522
    -
    helios::Location::latitude_deg
    float latitude_deg
    Latitude in degrees (+northern hemisphere, -southern hemisphere)
    Definition: helios_vector_types.h:1473
    -
    helios::Location::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::Location const &t)
    Write Location to output stream.
    Definition: helios_vector_types.h:1505
    -
    helios::Location::Location
    Location(float latitude_deg, float longitude_deg, float UTC_offset)
    latitude/longitude/UTC constructor
    Definition: helios_vector_types.h:1491
    -
    helios::Location::operator!=
    bool operator!=(const helios::Location &c) const
    check for inequality of two locations
    Definition: helios_vector_types.h:1526
    -
    helios::Location::UTC_offset
    float UTC_offset
    Offset from UTC in hours (+moving West)
    Definition: helios_vector_types.h:1477
    -
    helios::RGBAcolor
    R-G-B-A color vector.
    Definition: helios_vector_types.h:1024
    -
    helios::RGBAcolor::r
    float r
    Red color component.
    Definition: helios_vector_types.h:1029
    -
    helios::RGBAcolor::a
    float a
    Alpha (transparency) component.
    Definition: helios_vector_types.h:1038
    -
    helios::RGBAcolor::RGBAcolor
    RGBAcolor()
    Default constructor - initializes color to black.
    Definition: helios_vector_types.h:1041
    -
    helios::RGBAcolor::RGBAcolor
    RGBAcolor(float r, float g, float b, float a)
    Constructor given three floats denoting R-G-B components.
    Definition: helios_vector_types.h:1051
    -
    helios::RGBAcolor::scale
    void scale(float scale_factor)
    Scale RGBAcolor by some factor.
    Definition: helios_vector_types.h:1087
    -
    helios::RGBAcolor::operator!=
    bool operator!=(const helios::RGBAcolor &c) const
    check for inequality of two RGBA colors
    Definition: helios_vector_types.h:1159
    -
    helios::RGBAcolor::RGBAcolor
    RGBAcolor(const float C[4])
    Constructor given an array of three floats denoting R-G-B-A components.
    Definition: helios_vector_types.h:1062
    -
    helios::RGBAcolor::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::RGBAcolor &c)
    write RGBAcolor to output stream
    Definition: helios_vector_types.h:1098
    -
    helios::RGBAcolor::b
    float b
    Blue color component.
    Definition: helios_vector_types.h:1035
    -
    helios::RGBAcolor::operator==
    bool operator==(const helios::RGBAcolor &c) const
    check for equality of two RGBA colors
    Definition: helios_vector_types.h:1155
    -
    helios::RGBAcolor::g
    float g
    Green color component.
    Definition: helios_vector_types.h:1032
    -
    helios::RGBAcolor::RGBAcolor
    RGBAcolor(const std::vector< float > &C)
    Constructor given a vector of three floats denoting R-G-B-A components.
    Definition: helios_vector_types.h:1073
    -
    helios::RGBcolor
    R-G-B color vector.
    Definition: helios_vector_types.h:844
    -
    helios::RGBcolor::RGBcolor
    RGBcolor()
    Default constructor - initializes color to black.
    Definition: helios_vector_types.h:858
    -
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition: helios_vector_types.h:855
    -
    helios::RGBcolor::operator==
    bool operator==(const RGBcolor &c) const
    check for equality of two RGB colors
    Definition: helios_vector_types.h:966
    -
    helios::RGBcolor::r
    float r
    Red color component.
    Definition: helios_vector_types.h:849
    -
    helios::RGBcolor::RGBcolor
    RGBcolor(float r, float g, float b)
    Constructor given three floats denoting R-G-B components.
    Definition: helios_vector_types.h:867
    -
    helios::RGBcolor::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::RGBcolor &c)
    write RGBcolor to output stream
    Definition: helios_vector_types.h:920
    -
    helios::RGBcolor::scale
    void scale(float scale_factor)
    Scale RGBcolor by some factor.
    Definition: helios_vector_types.h:910
    -
    helios::RGBcolor::RGBcolor
    RGBcolor(const std::vector< float > &C)
    Constructor given a vector of three floats denoting R-G-B components.
    Definition: helios_vector_types.h:887
    -
    helios::RGBcolor::operator!=
    bool operator!=(const RGBcolor &c) const
    check for inequality of two RGB colors
    Definition: helios_vector_types.h:970
    -
    helios::RGBcolor::RGBcolor
    RGBcolor(const float C[3])
    Constructor given an array of three floats denoting R-G-B components.
    Definition: helios_vector_types.h:877
    -
    helios::RGBcolor::g
    float g
    Green color component.
    Definition: helios_vector_types.h:852
    -
    helios::RGBcolor::RGBcolor
    RGBcolor(const vec3 &C)
    Constructor given a vec3 denoting R-G-B components.
    Definition: helios_vector_types.h:900
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    - -
    helios::SphericalCoord::operator!=
    bool operator!=(const helios::SphericalCoord &c) const
    check for inequality of two spherical coordinates
    Definition: helios_vector_types.h:1620
    -
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition: helios_vector_types.h:1553
    -
    helios::SphericalCoord::SphericalCoord
    SphericalCoord()
    Default constructor.
    Definition: helios_vector_types.h:1559
    -
    helios::SphericalCoord::SphericalCoord
    SphericalCoord(const SphericalCoord &c)
    Copy constructor.
    Definition: helios_vector_types.h:1572
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::SphericalCoord const &coord)
    Write SphericalCoord to output stream.
    Definition: helios_vector_types.h:1591
    -
    helios::SphericalCoord::SphericalCoord
    SphericalCoord(float radius, float elevation_radians, float azimuth_radians)
    Initialize SphericalCoord by specifying radius, elevation, and azimuth.
    Definition: helios_vector_types.h:1569
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::SphericalCoord::operator==
    bool operator==(const helios::SphericalCoord &c) const
    check for equality of two spherical coordinates
    Definition: helios_vector_types.h:1616
    -
    helios::SphericalCoord::operator=
    SphericalCoord & operator=(const SphericalCoord &c)
    Assignment operator.
    Definition: helios_vector_types.h:1575
    - -
    helios::Time::Time
    Time(int hour, int minute)
    second/minute/hour constructor
    Definition: helios_vector_types.h:1373
    -
    helios::Time::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::Time const &t)
    Write Time to output stream.
    Definition: helios_vector_types.h:1415
    -
    helios::Time::Time
    Time()
    Default constructor.
    Definition: helios_vector_types.h:1362
    -
    helios::Time::second
    int second
    Second of minute.
    Definition: helios_vector_types.h:1355
    -
    helios::Time::hour
    int hour
    Hour of day.
    Definition: helios_vector_types.h:1359
    -
    helios::Time::minute
    int minute
    Minute of hour.
    Definition: helios_vector_types.h:1357
    -
    helios::Time::operator==
    bool operator==(const helios::Time &c) const
    check for equality of two times
    Definition: helios_vector_types.h:1458
    -
    helios::Time::Time
    Time(int hour, int minute, int second)
    minute/hour constructor
    Definition: helios_vector_types.h:1393
    -
    helios::Time::operator!=
    bool operator!=(const helios::Time &c) const
    check for inequality of two times
    Definition: helios_vector_types.h:1462
    -
    helios::int2
    Vector of two elements of type 'int'.
    Definition: helios_vector_types.h:44
    -
    helios::int2::operator+
    int2 operator+(const int2 &a) const
    Add two int2 vectors.
    Definition: helios_vector_types.h:112
    -
    helios::int2::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:50
    -
    helios::int2::operator-
    int2 operator-() const
    Multiply each element by -1.
    Definition: helios_vector_types.h:140
    -
    helios::int2::operator-=
    int2 & operator-=(const int2 &a)
    Deccrement int2 vector.
    Definition: helios_vector_types.h:122
    -
    helios::int2::operator==
    bool operator==(const int2 &a) const
    Equality for all elements.
    Definition: helios_vector_types.h:132
    -
    helios::int2::int2
    int2(const std::vector< int > &v)
    Construct int2 from a vector of ints.
    Definition: helios_vector_types.h:57
    -
    helios::int2::operator+=
    int2 & operator+=(const int2 &a)
    Increment int2 vector.
    Definition: helios_vector_types.h:116
    -
    helios::int2::operator!=
    bool operator!=(const int2 &a) const
    Inequality for all elements.
    Definition: helios_vector_types.h:136
    -
    helios::int2::int2
    int2(int v0, int v1)
    Construct int2 from two ints.
    Definition: helios_vector_types.h:68
    -
    helios::int2::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::int2 &vec)
    Write int2 to output stream.
    Definition: helios_vector_types.h:87
    -
    helios::int2::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:48
    -
    helios::int2::int2
    int2()
    Default constructor.
    Definition: helios_vector_types.h:54
    -
    helios::int2::int2
    int2(const int v[2])
    Construct int2 from an array of ints.
    Definition: helios_vector_types.h:65
    -
    helios::int3
    Vector of three elements of type 'int'.
    Definition: helios_vector_types.h:146
    -
    helios::int3::int3
    int3()
    Default constructor.
    Definition: helios_vector_types.h:158
    -
    helios::int3::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:150
    -
    helios::int3::int3
    int3(int v0, int v1, int v2)
    Construct int3 from three ints.
    Definition: helios_vector_types.h:173
    -
    helios::int3::operator-=
    int3 & operator-=(const int3 &a)
    Decrement int3 vector.
    Definition: helios_vector_types.h:218
    -
    helios::int3::int3
    int3(const int v[3])
    Construct int3 from an array of ints.
    Definition: helios_vector_types.h:170
    -
    helios::int3::operator+=
    int3 & operator+=(const int3 &a)
    Increment int3 vector.
    Definition: helios_vector_types.h:211
    -
    helios::int3::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::int3 &vec)
    Write int3 to output stream.
    Definition: helios_vector_types.h:191
    -
    helios::int3::operator!=
    bool operator!=(const int3 &a) const
    Inequality for all elements.
    Definition: helios_vector_types.h:233
    -
    helios::int3::int3
    int3(const std::vector< int > &v)
    Construct int3 from a vector of ints.
    Definition: helios_vector_types.h:161
    -
    helios::int3::operator+
    int3 operator+(const int3 &a) const
    Add two int3 vectors.
    Definition: helios_vector_types.h:207
    -
    helios::int3::operator==
    bool operator==(const int3 &a) const
    Equality for all elements.
    Definition: helios_vector_types.h:229
    -
    helios::int3::z
    int z
    Third element in vector.
    Definition: helios_vector_types.h:154
    -
    helios::int3::operator-
    int3 operator-() const
    Multiply each element by -1.
    Definition: helios_vector_types.h:237
    -
    helios::int3::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:152
    -
    helios::int4
    Vector of four elements of type 'int'.
    Definition: helios_vector_types.h:243
    -
    helios::int4::int4
    int4(const std::vector< int > &v)
    Construct int3 from a vector of ints.
    Definition: helios_vector_types.h:260
    -
    helios::int4::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:247
    -
    helios::int4::operator-=
    int4 & operator-=(const int4 &a)
    Decrement int4 vector.
    Definition: helios_vector_types.h:320
    -
    helios::int4::int4
    int4()
    Default constructor.
    Definition: helios_vector_types.h:257
    -
    helios::int4::operator-
    int4 operator-() const
    Multiply each element by -1.
    Definition: helios_vector_types.h:340
    -
    helios::int4::int4
    int4(int v0, int v1, int v2, int v3)
    Construct int4 from four ints.
    Definition: helios_vector_types.h:274
    -
    helios::int4::z
    int z
    Third element in vector.
    Definition: helios_vector_types.h:251
    -
    helios::int4::operator+
    int4 operator+(const int4 &a) const
    Add two int4 vectors.
    Definition: helios_vector_types.h:308
    -
    helios::int4::operator==
    bool operator==(const int4 &a) const
    Equality for all elements.
    Definition: helios_vector_types.h:332
    -
    helios::int4::w
    int w
    Fourth element in vector.
    Definition: helios_vector_types.h:253
    -
    helios::int4::operator+=
    int4 & operator+=(const int4 &a)
    Increment int4 vector.
    Definition: helios_vector_types.h:312
    -
    helios::int4::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::int4 &vec)
    Write int4 to output stream.
    Definition: helios_vector_types.h:292
    -
    helios::int4::int4
    int4(const int v[3])
    Construct int4 from an array of ints.
    Definition: helios_vector_types.h:271
    -
    helios::int4::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:249
    -
    helios::int4::operator!=
    bool operator!=(const int4 &a) const
    Inequality for all elements.
    Definition: helios_vector_types.h:336
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec2::operator+=
    vec2 & operator+=(const vec2 &a)
    Increment vec2 vector.
    Definition: helios_vector_types.h:445
    -
    helios::vec2::normalize
    vec2 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:355
    -
    helios::vec2::operator!=
    bool operator!=(const vec2 &a) const
    check for inequality of two vec2 vectors
    Definition: helios_vector_types.h:493
    -
    helios::vec2::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition: helios_vector_types.h:366
    -
    helios::vec2::vec2
    vec2(const std::vector< float > &v)
    Initialize vec2 using a vector of floats.
    Definition: helios_vector_types.h:375
    -
    helios::vec2::operator-=
    vec2 & operator-=(const vec2 &a)
    Decrement vec2 vector.
    Definition: helios_vector_types.h:451
    -
    helios::vec2::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::vec2 &vec)
    Write vec2 to output stream.
    Definition: helios_vector_types.h:414
    -
    helios::vec2::vec2
    vec2(const float v[2])
    Initialize vec2 using an array of floats.
    Definition: helios_vector_types.h:383
    -
    helios::vec2::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:350
    -
    helios::vec2::operator/
    vec2 operator/(float a) const
    Divide each element by scalar (scalar is divided on right: vec2/a)
    Definition: helios_vector_types.h:485
    -
    helios::vec2::vec2
    vec2()
    Default constructor.
    Definition: helios_vector_types.h:372
    -
    helios::vec2::operator==
    bool operator==(const vec2 &a) const
    check for equality of two vec2 vectors
    Definition: helios_vector_types.h:489
    -
    helios::vec2::operator+
    vec2 operator+(const vec2 &a) const
    Sum of two vec2 vectors.
    Definition: helios_vector_types.h:441
    -
    helios::vec2::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:352
    -
    helios::vec2::operator-
    vec2 operator-() const
    Multiply each element by -1.
    Definition: helios_vector_types.h:497
    -
    helios::vec2::vec2
    vec2(float v0, float v1)
    Initialize vec2 using two floats.
    Definition: helios_vector_types.h:386
    -
    helios::vec2::operator*
    float operator*(const vec2 &a) const
    Dot (scalar) product of two vec2 vectors.
    Definition: helios_vector_types.h:437
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::operator==
    bool operator==(const vec3 &a) const
    check for equality of two vec3 vectors
    Definition: helios_vector_types.h:657
    -
    helios::vec3::operator/
    vec3 operator/(float a) const
    Divide each element by scalar (scalar is divided on right: vec3/a)
    Definition: helios_vector_types.h:653
    -
    helios::vec3::operator+
    vec3 operator+(const vec3 &a) const
    Sum of two vec3 vectors.
    Definition: helios_vector_types.h:607
    -
    helios::vec3::operator-=
    vec3 & operator-=(const vec3 &a)
    Decrement vec3 vector.
    Definition: helios_vector_types.h:618
    -
    helios::vec3::operator-
    vec3 operator-() const
    Multiply vector by -1.
    Definition: helios_vector_types.h:665
    -
    helios::vec3::vec3
    vec3(const float v[3])
    Initialize vec3 using an array of floats.
    Definition: helios_vector_types.h:544
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:511
    -
    helios::vec3::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::vec3 &vec)
    Write vec3 to output stream.
    Definition: helios_vector_types.h:575
    -
    helios::vec3::vec3
    vec3()
    Default constructor.
    Definition: helios_vector_types.h:532
    -
    helios::vec3::vec3
    vec3(float v0, float v1, float v2)
    Initialize vec3 using three floats.
    Definition: helios_vector_types.h:547
    -
    helios::vec3::operator+=
    vec3 & operator+=(const vec3 &a)
    Increment vec3 vector.
    Definition: helios_vector_types.h:611
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    -
    helios::vec3::vec3
    vec3(const std::vector< float > &v)
    Initialize vec3 using a vector of floats.
    Definition: helios_vector_types.h:535
    -
    helios::vec3::operator!=
    bool operator!=(const vec3 &a) const
    check for inequality of two vec3 vectors
    Definition: helios_vector_types.h:661
    -
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition: helios_vector_types.h:526
    -
    helios::vec3::operator*
    float operator*(const vec3 &a) const
    Dot (scalar) product of two vec3 vectors.
    Definition: helios_vector_types.h:603
    -
    helios::vec4
    Vector of four elements of type 'float'.
    Definition: helios_vector_types.h:673
    -
    helios::vec4::operator+
    vec4 operator+(const vec4 &a) const
    Sum of two vec4 vectors.
    Definition: helios_vector_types.h:776
    -
    helios::vec4::vec4
    vec4(const std::vector< float > &v)
    Initialize vec4 using a vector of floats.
    Definition: helios_vector_types.h:708
    -
    helios::vec4::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::vec4 &vec)
    Write vec4 to output stream.
    Definition: helios_vector_types.h:749
    -
    helios::vec4::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:679
    -
    helios::vec4::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition: helios_vector_types.h:699
    -
    helios::vec4::operator-=
    vec4 & operator-=(const vec4 &a)
    Decrement vec4 vector.
    Definition: helios_vector_types.h:788
    -
    helios::vec4::w
    float w
    Fourth element in vector.
    Definition: helios_vector_types.h:683
    -
    helios::vec4::operator!=
    bool operator!=(const vec4 &a) const
    check for equality of two vec4 vectors
    Definition: helios_vector_types.h:832
    -
    helios::vec4::operator-
    vec4 operator-() const
    Multiply each element by -1.
    Definition: helios_vector_types.h:836
    -
    helios::vec4::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:681
    -
    helios::vec4::normalize
    vec4 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:686
    -
    helios::vec4::operator+=
    vec4 & operator+=(const vec4 &a)
    Increment vec4 vector.
    Definition: helios_vector_types.h:780
    -
    helios::vec4::vec4
    vec4()
    Default constructor.
    Definition: helios_vector_types.h:705
    -
    helios::vec4::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:677
    -
    helios::vec4::operator/
    vec4 operator/(float a) const
    Divide each element by scalar (scalar is divided on right: vec4/a)
    Definition: helios_vector_types.h:824
    -
    helios::vec4::operator==
    bool operator==(const vec4 &a) const
    check for equality of two vec4 vectors
    Definition: helios_vector_types.h:828
    -
    helios::vec4::vec4
    vec4(const float v[4])
    Initialize vec3 using an array of floats.
    Definition: helios_vector_types.h:718
    -
    helios::vec4::operator*
    float operator*(const vec4 &a) const
    Dot (scalar) product of two vec4 vectors.
    Definition: helios_vector_types.h:772
    -
    helios::vec4::vec4
    vec4(float v0, float v1, float v2, float v3)
    Initialize vec4 using four floats.
    Definition: helios_vector_types.h:721
    +
    helios::JulianDay
    int JulianDay(int day, int month, int year)
    Convert calendar day (day,month,year) to Julian day.
    Definition global.cpp:1350
    +
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition helios_vector_types.h:99
    +
    helios::make_Time
    Time make_Time(int hour, int minute)
    Make a Time vector.
    Definition helios_vector_types.h:1427
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_Location
    Location make_Location(float latitude_deg, float longitude_deg, float UTC_offset)
    Make a Location vector.
    Definition helios_vector_types.h:1518
    +
    helios::make_RGBAcolor
    RGBAcolor make_RGBAcolor(float r, float g, float b, float a)
    Make an RGBAcolor vector.
    Definition helios_vector_types.h:1133
    +
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition helios_vector_types.h:1241
    +
    helios::Julian2Calendar
    Date Julian2Calendar(int JulianDay, int year)
    Convert a Julian day to a calendar Date vector.
    Definition helios_vector_types.h:1268
    +
    helios::Calendar2Julian
    int Calendar2Julian(Date date)
    Convert a calendar Date vector to Julian day.
    Definition helios_vector_types.h:1310
    +
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition helios_vector_types.h:954
    +
    helios::operator*
    vec2 operator*(float a, const vec2 &v)
    Multiply each element by scalar (scalar is multiplied on left: a*vec2)
    Definition helios_vector_types.h:481
    +
    helios::operator-
    vec2 operator-(float a, const vec2 &v)
    Subtract a scalar from each element (scalar is subtracted on left: a-vec2)
    Definition helios_vector_types.h:473
    +
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition helios_vector_types.h:198
    +
    helios::operator+
    vec2 operator+(float a, const vec2 &v)
    Add a scalar to each element (scalar is added on left: a+vec2)
    Definition helios_vector_types.h:461
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition helios_vector_types.h:599
    +
    helios::make_vec4
    vec4 make_vec4(float x, float y, float z, float w)
    Make a vec4 from three floats.
    Definition helios_vector_types.h:763
    +
    helios::make_int4
    int4 make_int4(int x, int y, int z, int w)
    Make an int4 vector from three ints.
    Definition helios_vector_types.h:299
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    + +
    helios::Date::operator==
    bool operator==(const helios::Date &c) const
    check for equality of two dates
    Definition helios_vector_types.h:1254
    +
    helios::Date::Date
    Date()
    Default constructor.
    Definition helios_vector_types.h:1179
    +
    helios::Date::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::Date const &d)
    Write Date to output stream.
    Definition helios_vector_types.h:1228
    +
    helios::Date::month
    int month
    Month of year.
    Definition helios_vector_types.h:1174
    +
    helios::Date::incrementDay
    void incrementDay()
    Increment Date vector by one day.
    Definition global.cpp:202
    +
    helios::Date::day
    int day
    Day of month.
    Definition helios_vector_types.h:1172
    +
    helios::Date::operator!=
    bool operator!=(const helios::Date &c) const
    check for inequality of two Dates
    Definition helios_vector_types.h:1258
    +
    helios::Date::Date
    Date(int day, int month, int year)
    Day/Month/Year constructor.
    Definition helios_vector_types.h:1191
    +
    helios::Date::JulianDay
    int JulianDay() const
    Convert to Julian day.
    Definition global.cpp:186
    +
    helios::Date::isLeapYear
    bool isLeapYear() const
    Check whether it is a leap year.
    Definition global.cpp:215
    +
    helios::Date::year
    int year
    Year in YYYY format.
    Definition helios_vector_types.h:1176
    + +
    helios::Location::Location
    Location()
    Default constructor.
    Definition helios_vector_types.h:1480
    +
    helios::Location::longitude_deg
    float longitude_deg
    Longitude in degrees (+western hemisphere, -eastern hemisphere)
    Definition helios_vector_types.h:1475
    +
    helios::Location::operator==
    bool operator==(const helios::Location &c) const
    check for equality of two locations
    Definition helios_vector_types.h:1522
    +
    helios::Location::latitude_deg
    float latitude_deg
    Latitude in degrees (+northern hemisphere, -southern hemisphere)
    Definition helios_vector_types.h:1473
    +
    helios::Location::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::Location const &t)
    Write Location to output stream.
    Definition helios_vector_types.h:1505
    +
    helios::Location::Location
    Location(float latitude_deg, float longitude_deg, float UTC_offset)
    latitude/longitude/UTC constructor
    Definition helios_vector_types.h:1491
    +
    helios::Location::operator!=
    bool operator!=(const helios::Location &c) const
    check for inequality of two locations
    Definition helios_vector_types.h:1526
    +
    helios::Location::UTC_offset
    float UTC_offset
    Offset from UTC in hours (+moving West)
    Definition helios_vector_types.h:1477
    +
    helios::RGBAcolor
    R-G-B-A color vector.
    Definition helios_vector_types.h:1024
    +
    helios::RGBAcolor::r
    float r
    Red color component.
    Definition helios_vector_types.h:1029
    +
    helios::RGBAcolor::a
    float a
    Alpha (transparency) component.
    Definition helios_vector_types.h:1038
    +
    helios::RGBAcolor::RGBAcolor
    RGBAcolor()
    Default constructor - initializes color to black.
    Definition helios_vector_types.h:1041
    +
    helios::RGBAcolor::RGBAcolor
    RGBAcolor(float r, float g, float b, float a)
    Constructor given three floats denoting R-G-B components.
    Definition helios_vector_types.h:1051
    +
    helios::RGBAcolor::scale
    void scale(float scale_factor)
    Scale RGBAcolor by some factor.
    Definition helios_vector_types.h:1087
    +
    helios::RGBAcolor::operator!=
    bool operator!=(const helios::RGBAcolor &c) const
    check for inequality of two RGBA colors
    Definition helios_vector_types.h:1159
    +
    helios::RGBAcolor::RGBAcolor
    RGBAcolor(const float C[4])
    Constructor given an array of three floats denoting R-G-B-A components.
    Definition helios_vector_types.h:1062
    +
    helios::RGBAcolor::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::RGBAcolor &c)
    write RGBAcolor to output stream
    Definition helios_vector_types.h:1098
    +
    helios::RGBAcolor::b
    float b
    Blue color component.
    Definition helios_vector_types.h:1035
    +
    helios::RGBAcolor::operator==
    bool operator==(const helios::RGBAcolor &c) const
    check for equality of two RGBA colors
    Definition helios_vector_types.h:1155
    +
    helios::RGBAcolor::g
    float g
    Green color component.
    Definition helios_vector_types.h:1032
    +
    helios::RGBAcolor::RGBAcolor
    RGBAcolor(const std::vector< float > &C)
    Constructor given a vector of three floats denoting R-G-B-A components.
    Definition helios_vector_types.h:1073
    +
    helios::RGBcolor
    R-G-B color vector.
    Definition helios_vector_types.h:844
    +
    helios::RGBcolor::RGBcolor
    RGBcolor()
    Default constructor - initializes color to black.
    Definition helios_vector_types.h:858
    +
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition helios_vector_types.h:855
    +
    helios::RGBcolor::operator==
    bool operator==(const RGBcolor &c) const
    check for equality of two RGB colors
    Definition helios_vector_types.h:966
    +
    helios::RGBcolor::r
    float r
    Red color component.
    Definition helios_vector_types.h:849
    +
    helios::RGBcolor::RGBcolor
    RGBcolor(float r, float g, float b)
    Constructor given three floats denoting R-G-B components.
    Definition helios_vector_types.h:867
    +
    helios::RGBcolor::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::RGBcolor &c)
    write RGBcolor to output stream
    Definition helios_vector_types.h:920
    +
    helios::RGBcolor::scale
    void scale(float scale_factor)
    Scale RGBcolor by some factor.
    Definition helios_vector_types.h:910
    +
    helios::RGBcolor::RGBcolor
    RGBcolor(const std::vector< float > &C)
    Constructor given a vector of three floats denoting R-G-B components.
    Definition helios_vector_types.h:887
    +
    helios::RGBcolor::operator!=
    bool operator!=(const RGBcolor &c) const
    check for inequality of two RGB colors
    Definition helios_vector_types.h:970
    +
    helios::RGBcolor::RGBcolor
    RGBcolor(const float C[3])
    Constructor given an array of three floats denoting R-G-B components.
    Definition helios_vector_types.h:877
    +
    helios::RGBcolor::g
    float g
    Green color component.
    Definition helios_vector_types.h:852
    +
    helios::RGBcolor::RGBcolor
    RGBcolor(const vec3 &C)
    Constructor given a vec3 denoting R-G-B components.
    Definition helios_vector_types.h:900
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    + +
    helios::SphericalCoord::operator!=
    bool operator!=(const helios::SphericalCoord &c) const
    check for inequality of two spherical coordinates
    Definition helios_vector_types.h:1620
    +
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition helios_vector_types.h:1553
    +
    helios::SphericalCoord::SphericalCoord
    SphericalCoord()
    Default constructor.
    Definition helios_vector_types.h:1559
    +
    helios::SphericalCoord::SphericalCoord
    SphericalCoord(const SphericalCoord &c)
    Copy constructor.
    Definition helios_vector_types.h:1572
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::SphericalCoord const &coord)
    Write SphericalCoord to output stream.
    Definition helios_vector_types.h:1591
    +
    helios::SphericalCoord::SphericalCoord
    SphericalCoord(float radius, float elevation_radians, float azimuth_radians)
    Initialize SphericalCoord by specifying radius, elevation, and azimuth.
    Definition helios_vector_types.h:1569
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::SphericalCoord::operator==
    bool operator==(const helios::SphericalCoord &c) const
    check for equality of two spherical coordinates
    Definition helios_vector_types.h:1616
    +
    helios::SphericalCoord::operator=
    SphericalCoord & operator=(const SphericalCoord &c)
    Assignment operator.
    Definition helios_vector_types.h:1575
    + +
    helios::Time::Time
    Time(int hour, int minute)
    second/minute/hour constructor
    Definition helios_vector_types.h:1373
    +
    helios::Time::operator<<
    friend std::ostream & operator<<(std::ostream &os, helios::Time const &t)
    Write Time to output stream.
    Definition helios_vector_types.h:1415
    +
    helios::Time::Time
    Time()
    Default constructor.
    Definition helios_vector_types.h:1362
    +
    helios::Time::second
    int second
    Second of minute.
    Definition helios_vector_types.h:1355
    +
    helios::Time::hour
    int hour
    Hour of day.
    Definition helios_vector_types.h:1359
    +
    helios::Time::minute
    int minute
    Minute of hour.
    Definition helios_vector_types.h:1357
    +
    helios::Time::operator==
    bool operator==(const helios::Time &c) const
    check for equality of two times
    Definition helios_vector_types.h:1458
    +
    helios::Time::Time
    Time(int hour, int minute, int second)
    minute/hour constructor
    Definition helios_vector_types.h:1393
    +
    helios::Time::operator!=
    bool operator!=(const helios::Time &c) const
    check for inequality of two times
    Definition helios_vector_types.h:1462
    +
    helios::int2
    Vector of two elements of type 'int'.
    Definition helios_vector_types.h:44
    +
    helios::int2::operator+
    int2 operator+(const int2 &a) const
    Add two int2 vectors.
    Definition helios_vector_types.h:112
    +
    helios::int2::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:50
    +
    helios::int2::operator-
    int2 operator-() const
    Multiply each element by -1.
    Definition helios_vector_types.h:140
    +
    helios::int2::operator-=
    int2 & operator-=(const int2 &a)
    Deccrement int2 vector.
    Definition helios_vector_types.h:122
    +
    helios::int2::operator==
    bool operator==(const int2 &a) const
    Equality for all elements.
    Definition helios_vector_types.h:132
    +
    helios::int2::int2
    int2(const std::vector< int > &v)
    Construct int2 from a vector of ints.
    Definition helios_vector_types.h:57
    +
    helios::int2::operator+=
    int2 & operator+=(const int2 &a)
    Increment int2 vector.
    Definition helios_vector_types.h:116
    +
    helios::int2::operator!=
    bool operator!=(const int2 &a) const
    Inequality for all elements.
    Definition helios_vector_types.h:136
    +
    helios::int2::int2
    int2(int v0, int v1)
    Construct int2 from two ints.
    Definition helios_vector_types.h:68
    +
    helios::int2::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::int2 &vec)
    Write int2 to output stream.
    Definition helios_vector_types.h:87
    +
    helios::int2::x
    int x
    First element in vector.
    Definition helios_vector_types.h:48
    +
    helios::int2::int2
    int2()
    Default constructor.
    Definition helios_vector_types.h:54
    +
    helios::int2::int2
    int2(const int v[2])
    Construct int2 from an array of ints.
    Definition helios_vector_types.h:65
    +
    helios::int3
    Vector of three elements of type 'int'.
    Definition helios_vector_types.h:146
    +
    helios::int3::int3
    int3()
    Default constructor.
    Definition helios_vector_types.h:158
    +
    helios::int3::x
    int x
    First element in vector.
    Definition helios_vector_types.h:150
    +
    helios::int3::int3
    int3(int v0, int v1, int v2)
    Construct int3 from three ints.
    Definition helios_vector_types.h:173
    +
    helios::int3::operator-=
    int3 & operator-=(const int3 &a)
    Decrement int3 vector.
    Definition helios_vector_types.h:218
    +
    helios::int3::int3
    int3(const int v[3])
    Construct int3 from an array of ints.
    Definition helios_vector_types.h:170
    +
    helios::int3::operator+=
    int3 & operator+=(const int3 &a)
    Increment int3 vector.
    Definition helios_vector_types.h:211
    +
    helios::int3::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::int3 &vec)
    Write int3 to output stream.
    Definition helios_vector_types.h:191
    +
    helios::int3::operator!=
    bool operator!=(const int3 &a) const
    Inequality for all elements.
    Definition helios_vector_types.h:233
    +
    helios::int3::int3
    int3(const std::vector< int > &v)
    Construct int3 from a vector of ints.
    Definition helios_vector_types.h:161
    +
    helios::int3::operator+
    int3 operator+(const int3 &a) const
    Add two int3 vectors.
    Definition helios_vector_types.h:207
    +
    helios::int3::operator==
    bool operator==(const int3 &a) const
    Equality for all elements.
    Definition helios_vector_types.h:229
    +
    helios::int3::z
    int z
    Third element in vector.
    Definition helios_vector_types.h:154
    +
    helios::int3::operator-
    int3 operator-() const
    Multiply each element by -1.
    Definition helios_vector_types.h:237
    +
    helios::int3::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:152
    +
    helios::int4
    Vector of four elements of type 'int'.
    Definition helios_vector_types.h:243
    +
    helios::int4::int4
    int4(const std::vector< int > &v)
    Construct int3 from a vector of ints.
    Definition helios_vector_types.h:260
    +
    helios::int4::x
    int x
    First element in vector.
    Definition helios_vector_types.h:247
    +
    helios::int4::operator-=
    int4 & operator-=(const int4 &a)
    Decrement int4 vector.
    Definition helios_vector_types.h:320
    +
    helios::int4::int4
    int4()
    Default constructor.
    Definition helios_vector_types.h:257
    +
    helios::int4::operator-
    int4 operator-() const
    Multiply each element by -1.
    Definition helios_vector_types.h:340
    +
    helios::int4::int4
    int4(int v0, int v1, int v2, int v3)
    Construct int4 from four ints.
    Definition helios_vector_types.h:274
    +
    helios::int4::z
    int z
    Third element in vector.
    Definition helios_vector_types.h:251
    +
    helios::int4::operator+
    int4 operator+(const int4 &a) const
    Add two int4 vectors.
    Definition helios_vector_types.h:308
    +
    helios::int4::operator==
    bool operator==(const int4 &a) const
    Equality for all elements.
    Definition helios_vector_types.h:332
    +
    helios::int4::w
    int w
    Fourth element in vector.
    Definition helios_vector_types.h:253
    +
    helios::int4::operator+=
    int4 & operator+=(const int4 &a)
    Increment int4 vector.
    Definition helios_vector_types.h:312
    +
    helios::int4::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::int4 &vec)
    Write int4 to output stream.
    Definition helios_vector_types.h:292
    +
    helios::int4::int4
    int4(const int v[3])
    Construct int4 from an array of ints.
    Definition helios_vector_types.h:271
    +
    helios::int4::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:249
    +
    helios::int4::operator!=
    bool operator!=(const int4 &a) const
    Inequality for all elements.
    Definition helios_vector_types.h:336
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec2::operator+=
    vec2 & operator+=(const vec2 &a)
    Increment vec2 vector.
    Definition helios_vector_types.h:445
    +
    helios::vec2::normalize
    vec2 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:355
    +
    helios::vec2::operator!=
    bool operator!=(const vec2 &a) const
    check for inequality of two vec2 vectors
    Definition helios_vector_types.h:493
    +
    helios::vec2::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition helios_vector_types.h:366
    +
    helios::vec2::vec2
    vec2(const std::vector< float > &v)
    Initialize vec2 using a vector of floats.
    Definition helios_vector_types.h:375
    +
    helios::vec2::operator-=
    vec2 & operator-=(const vec2 &a)
    Decrement vec2 vector.
    Definition helios_vector_types.h:451
    +
    helios::vec2::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::vec2 &vec)
    Write vec2 to output stream.
    Definition helios_vector_types.h:414
    +
    helios::vec2::vec2
    vec2(const float v[2])
    Initialize vec2 using an array of floats.
    Definition helios_vector_types.h:383
    +
    helios::vec2::x
    float x
    First element in vector.
    Definition helios_vector_types.h:350
    +
    helios::vec2::operator/
    vec2 operator/(float a) const
    Divide each element by scalar (scalar is divided on right: vec2/a)
    Definition helios_vector_types.h:485
    +
    helios::vec2::vec2
    vec2()
    Default constructor.
    Definition helios_vector_types.h:372
    +
    helios::vec2::operator==
    bool operator==(const vec2 &a) const
    check for equality of two vec2 vectors
    Definition helios_vector_types.h:489
    +
    helios::vec2::operator+
    vec2 operator+(const vec2 &a) const
    Sum of two vec2 vectors.
    Definition helios_vector_types.h:441
    +
    helios::vec2::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:352
    +
    helios::vec2::operator-
    vec2 operator-() const
    Multiply each element by -1.
    Definition helios_vector_types.h:497
    +
    helios::vec2::vec2
    vec2(float v0, float v1)
    Initialize vec2 using two floats.
    Definition helios_vector_types.h:386
    +
    helios::vec2::operator*
    float operator*(const vec2 &a) const
    Dot (scalar) product of two vec2 vectors.
    Definition helios_vector_types.h:437
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::operator==
    bool operator==(const vec3 &a) const
    check for equality of two vec3 vectors
    Definition helios_vector_types.h:657
    +
    helios::vec3::operator/
    vec3 operator/(float a) const
    Divide each element by scalar (scalar is divided on right: vec3/a)
    Definition helios_vector_types.h:653
    +
    helios::vec3::operator+
    vec3 operator+(const vec3 &a) const
    Sum of two vec3 vectors.
    Definition helios_vector_types.h:607
    +
    helios::vec3::operator-=
    vec3 & operator-=(const vec3 &a)
    Decrement vec3 vector.
    Definition helios_vector_types.h:618
    +
    helios::vec3::operator-
    vec3 operator-() const
    Multiply vector by -1.
    Definition helios_vector_types.h:665
    +
    helios::vec3::vec3
    vec3(const float v[3])
    Initialize vec3 using an array of floats.
    Definition helios_vector_types.h:544
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
    +
    helios::vec3::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:511
    +
    helios::vec3::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::vec3 &vec)
    Write vec3 to output stream.
    Definition helios_vector_types.h:575
    +
    helios::vec3::vec3
    vec3()
    Default constructor.
    Definition helios_vector_types.h:532
    +
    helios::vec3::vec3
    vec3(float v0, float v1, float v2)
    Initialize vec3 using three floats.
    Definition helios_vector_types.h:547
    +
    helios::vec3::operator+=
    vec3 & operator+=(const vec3 &a)
    Increment vec3 vector.
    Definition helios_vector_types.h:611
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    +
    helios::vec3::vec3
    vec3(const std::vector< float > &v)
    Initialize vec3 using a vector of floats.
    Definition helios_vector_types.h:535
    +
    helios::vec3::operator!=
    bool operator!=(const vec3 &a) const
    check for inequality of two vec3 vectors
    Definition helios_vector_types.h:661
    +
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition helios_vector_types.h:526
    +
    helios::vec3::operator*
    float operator*(const vec3 &a) const
    Dot (scalar) product of two vec3 vectors.
    Definition helios_vector_types.h:603
    +
    helios::vec4
    Vector of four elements of type 'float'.
    Definition helios_vector_types.h:673
    +
    helios::vec4::operator+
    vec4 operator+(const vec4 &a) const
    Sum of two vec4 vectors.
    Definition helios_vector_types.h:776
    +
    helios::vec4::vec4
    vec4(const std::vector< float > &v)
    Initialize vec4 using a vector of floats.
    Definition helios_vector_types.h:708
    +
    helios::vec4::operator<<
    friend std::ostream & operator<<(std::ostream &os, const helios::vec4 &vec)
    Write vec4 to output stream.
    Definition helios_vector_types.h:749
    +
    helios::vec4::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:679
    +
    helios::vec4::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition helios_vector_types.h:699
    +
    helios::vec4::operator-=
    vec4 & operator-=(const vec4 &a)
    Decrement vec4 vector.
    Definition helios_vector_types.h:788
    +
    helios::vec4::w
    float w
    Fourth element in vector.
    Definition helios_vector_types.h:683
    +
    helios::vec4::operator!=
    bool operator!=(const vec4 &a) const
    check for equality of two vec4 vectors
    Definition helios_vector_types.h:832
    +
    helios::vec4::operator-
    vec4 operator-() const
    Multiply each element by -1.
    Definition helios_vector_types.h:836
    +
    helios::vec4::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:681
    +
    helios::vec4::normalize
    vec4 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:686
    +
    helios::vec4::operator+=
    vec4 & operator+=(const vec4 &a)
    Increment vec4 vector.
    Definition helios_vector_types.h:780
    +
    helios::vec4::vec4
    vec4()
    Default constructor.
    Definition helios_vector_types.h:705
    +
    helios::vec4::x
    float x
    First element in vector.
    Definition helios_vector_types.h:677
    +
    helios::vec4::operator/
    vec4 operator/(float a) const
    Divide each element by scalar (scalar is divided on right: vec4/a)
    Definition helios_vector_types.h:824
    +
    helios::vec4::operator==
    bool operator==(const vec4 &a) const
    check for equality of two vec4 vectors
    Definition helios_vector_types.h:828
    +
    helios::vec4::vec4
    vec4(const float v[4])
    Initialize vec3 using an array of floats.
    Definition helios_vector_types.h:718
    +
    helios::vec4::operator*
    float operator*(const vec4 &a) const
    Dot (scalar) product of two vec4 vectors.
    Definition helios_vector_types.h:772
    +
    helios::vec4::vec4
    vec4(float v0, float v1, float v2, float v3)
    Initialize vec4 using four floats.
    Definition helios_vector_types.h:721
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/hierarchy.html b/doc/html/hierarchy.html index 0220d16e2..be32c13f3 100644 --- a/doc/html/hierarchy.html +++ b/doc/html/hierarchy.html @@ -38,31 +38,43 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    This inheritance list is sorted roughly, but not completely, alphabetically:
    -
    [detail level 123]
    +
    [detail level 123]
    - - + + @@ -118,7 +130,7 @@ - + @@ -194,7 +206,8 @@
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     CAerialHitPointStructure containing metadata for an aerial hit point
     CAerialLiDARcloudPrimary class for aerial LiDAR scan
     CAerialScanMetadataStructure containing metadata for an aerial scan
     CAxisRotation
     ▼CBaseCanopyParametersBase struct class for Canopy parameters
     ▼CBaseGrapeVineParameters
     ▼CBaseCanopyParametersBase struct class for Canopy parameters
     ▼CBaseGrapeVineParameters
     CGobletGrapevineParametersParameters defining the grapevine canopy with goblet (vent a taille) trellis
     CSplitGrapevineParametersParameters defining the grapevine canopy with a split (quad) trellis
     CUnilateralGrapevineParametersParameters defining the grapevine canopy with unilateral trellis
     CCameraPropertiesProperties defining a radiation camera
     CCanopyGenerator
     CColormapRGB color map
     ▼Chelios::CompoundObject
     ▼Chelios::CompoundObject
     Chelios::BoxBox compound object class
     Chelios::ConeCone compound object class
     Chelios::DiskDisk compound object class
    -
     v1.3.25 +
     v1.3.26
    - + + +
    +
    +
    -
    Helios Documentation v1.3.25
    +
    Helios Documentation v1.3.26


    @@ -135,10 +147,12 @@

    Downloading the Code

    zlib: Copyright (C) 1995-2004 Jean-loup Gailly and Mark Adler

    Plug-ins may use other third-party software, which is acknowledged in their documentation pages.

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t=$(this);t.dataSM("scroll-arrows")&&t.dataSM("scroll-arrows").remove(),t.dataSM("shown-before")&&((i.opts.subMenusMinWidth||i.opts.subMenusMaxWidth)&&t.css({width:"",minWidth:"",maxWidth:""}).removeClass("sm-nowrap"),t.dataSM("scroll-arrows")&&t.dataSM("scroll-arrows").remove(),t.css({zIndex:"",top:"",left:"",marginLeft:"",marginTop:"",display:""})),0==(t.attr("id")||"").indexOf(i.accessIdPrefix)&&t.removeAttr("id")}).removeDataSM("in-mega").removeDataSM("shown-before").removeDataSM("scroll-arrows").removeDataSM("parent-a").removeDataSM("level").removeDataSM("beforefirstshowfired").removeAttr("role").removeAttr("aria-hidden").removeAttr("aria-labelledby").removeAttr("aria-expanded"),this.$root.find("a.has-submenu").each(function(){var t=$(this);0==t.attr("id").indexOf(i.accessIdPrefix)&&t.removeAttr("id")}).removeClass("has-submenu").removeDataSM("sub").removeAttr("aria-haspopup").removeAttr("aria-controls").removeAttr("aria-expanded").closest("li").removeDataSM("sub"),this.opts.subIndicators&&this.$root.find("span.sub-arrow").remove(),this.opts.markCurrentItem&&this.$root.find("a.current").removeClass("current"),t||(this.$root=null,this.$firstLink=null,this.$firstSub=null,this.$disableOverlay&&(this.$disableOverlay.remove(),this.$disableOverlay=null),menuTrees.splice($.inArray(this,menuTrees),1))},disable:function(t){if(!this.disabled){if(this.menuHideAll(),!t&&!this.opts.isPopup&&this.$root.is(":visible")){var e=this.$root.offset();this.$disableOverlay=$('
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e,i,s=t.dataSM("parent-a"),o=s.closest("li"),a=o.parent(),n=t.dataSM("level"),r=this.getWidth(t),h=this.getHeight(t),u=s.offset(),l=u.left,c=u.top,d=this.getWidth(s),m=this.getHeight(s),p=$(window),f=p.scrollLeft(),v=p.scrollTop(),b=this.getViewportWidth(),S=this.getViewportHeight(),g=a.parent().is("[data-sm-horizontal-sub]")||2==n&&!a.hasClass("sm-vertical"),M=this.opts.rightToLeftSubMenus&&!o.is("[data-sm-reverse]")||!this.opts.rightToLeftSubMenus&&o.is("[data-sm-reverse]"),w=2==n?this.opts.mainMenuSubOffsetX:this.opts.subMenusSubOffsetX,T=2==n?this.opts.mainMenuSubOffsetY:this.opts.subMenusSubOffsetY;if(g?(e=M?d-r-w:w,i=this.opts.bottomToTopSubMenus?-h-T:m+T):(e=M?w-r:d-w,i=this.opts.bottomToTopSubMenus?m-T-h:T),this.opts.keepInViewport){var y=l+e,I=c+i;if(M&&f>y?e=g?f-y+e:d-w:!M&&y+r>f+b&&(e=g?f+b-r-y+e:w-r),g||(S>h&&I+h>v+S?i+=v+S-h-I:(h>=S||v>I)&&(i+=v-I)),g&&(I+h>v+S+.49||v>I)||!g&&h>S+.49){var 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e=t.dataSM("scroll"),i=$(window).scrollTop()-t.dataSM("parent-a").offset().top-e.itemH;this.cssTransforms3d&&(i=-(parseFloat(t.css("margin-top"))-i)),$.extend(e,{upEnd:i,downEnd:i+this.getViewportHeight()-e.subH})},menuScrollStop:function(t){return this.scrollTimeout?(cancelAnimationFrame(this.scrollTimeout),this.scrollTimeout=0,t.dataSM("scroll").step=1,!0):void 0},menuScrollTouch:function(t,e){if(e=e.originalEvent,isTouchEvent(e)){var i=this.getTouchPoint(e);if(this.getClosestMenu(i.target)==t[0]){var s=t.dataSM("scroll");if(/(start|down)$/i.test(e.type))this.menuScrollStop(t)?(e.preventDefault(),this.$touchScrollingSub=t):this.$touchScrollingSub=null,this.menuScrollRefreshData(t),$.extend(s,{touchStartY:i.pageY,touchStartTime:e.timeStamp});else if(/move$/i.test(e.type)){var o=void 0!==s.touchY?s.touchY:s.touchStartY;if(void 0!==o&&o!=i.pageY){this.$touchScrollingSub=t;var a=i.pageY>o;void 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e=t.dataSM("parent-a"),i=this.isCollapsible();if((this.opts.keepHighlighted||i)&&e.addClass("highlighted"),i)t.removeClass("sm-nowrap").css({zIndex:"",width:"auto",minWidth:"",maxWidth:"",top:"",left:"",marginLeft:"",marginTop:""});else{if(t.css("z-index",this.zIndexInc=(this.zIndexInc||this.getStartZIndex())+1),(this.opts.subMenusMinWidth||this.opts.subMenusMaxWidth)&&(t.css({width:"auto",minWidth:"",maxWidth:""}).addClass("sm-nowrap"),this.opts.subMenusMinWidth&&t.css("min-width",this.opts.subMenusMinWidth),this.opts.subMenusMaxWidth)){var s=this.getWidth(t);t.css("max-width",this.opts.subMenusMaxWidth),s>this.getWidth(t)&&t.removeClass("sm-nowrap").css("width",this.opts.subMenusMaxWidth)}this.menuPosition(t)}var o=function(){t.css("overflow","")};i?canAnimate&&this.opts.collapsibleShowFunction?this.opts.collapsibleShowFunction.call(this,t,o):t.show(this.opts.collapsibleShowDuration,o):canAnimate&&this.opts.showFunction?this.opts.showFunction.call(this,t,o):t.show(this.opts.showDuration,o),e.attr("aria-expanded","true"),t.attr({"aria-expanded":"true","aria-hidden":"false"}),this.visibleSubMenus.push(t),this.$root.triggerHandler("show.smapi",t[0])}},popupHide:function(t){this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0);var e=this;this.hideTimeout=setTimeout(function(){e.menuHideAll()},t?1:this.opts.hideTimeout)},popupShow:function(t,e){if(!this.opts.isPopup)return alert('SmartMenus jQuery Error:\n\nIf you want to show this menu via the "popupShow" method, set the isPopup:true option.'),void 0;if(this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0),this.$root.dataSM("shown-before",!0),canAnimate&&this.$root.stop(!0,!0),!this.$root.is(":visible")){this.$root.css({left:t,top:e});var i=this,s=function(){i.$root.css("overflow","")};canAnimate&&this.opts.showFunction?this.opts.showFunction.call(this,this.$root,s):this.$root.show(this.opts.showDuration,s),this.visibleSubMenus[0]=this.$root}},refresh:function(){this.destroy(!0),this.init(!0)},rootKeyDown:function(t){if(this.handleEvents())switch(t.keyCode){case 27:var e=this.activatedItems[0];if(e){this.menuHideAll(),e[0].focus();var i=e.dataSM("sub");i&&this.menuHide(i)}break;case 32:var s=$(t.target);if(s.is("a")&&this.handleItemEvents(s)){var i=s.dataSM("sub");i&&!i.is(":visible")&&(this.itemClick({currentTarget:t.target}),t.preventDefault())}}},rootOut:function(t){if(this.handleEvents()&&!this.isTouchMode()&&t.target!=this.$root[0]&&(this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0),!this.opts.showOnClick||!this.opts.hideOnClick)){var e=this;this.hideTimeout=setTimeout(function(){e.menuHideAll()},this.opts.hideTimeout)}},rootOver:function(t){this.handleEvents()&&!this.isTouchMode()&&t.target!=this.$root[0]&&this.hideTimeout&&(clearTimeout(this.hideTimeout),this.hideTimeout=0)},winResize:function(t){if(this.handleEvents()){if(!("onorientationchange"in window)||"orientationchange"==t.type){var e=this.isCollapsible();this.wasCollapsible&&e||(this.activatedItems.length&&this.activatedItems[this.activatedItems.length-1][0].blur(),this.menuHideAll()),this.wasCollapsible=e}}else if(this.$disableOverlay){var 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define&&define.amd?define(["jquery"],t):"object"==typeof module&&"object"==typeof module.exports?module.exports=t(require("jquery")):t(jQuery)})(function($){function initMouseDetection(t){var e=".smartmenus_mouse";if(mouseDetectionEnabled||t)mouseDetectionEnabled&&t&&($(document).off(e),mouseDetectionEnabled=!1);else{var i=!0,s=null,o={mousemove:function(t){var e={x:t.pageX,y:t.pageY,timeStamp:(new Date).getTime()};if(s){var o=Math.abs(s.x-e.x),a=Math.abs(s.y-e.y);if((o>0||a>0)&&2>=o&&2>=a&&300>=e.timeStamp-s.timeStamp&&(mouse=!0,i)){var n=$(t.target).closest("a");n.is("a")&&$.each(menuTrees,function(){return $.contains(this.$root[0],n[0])?(this.itemEnter({currentTarget:n[0]}),!1):void 0}),i=!1}}s=e}};o[touchEvents?"touchstart":"pointerover pointermove pointerout MSPointerOver MSPointerMove MSPointerOut"]=function(t){isTouchEvent(t.originalEvent)&&(mouse=!1)},$(document).on(getEventsNS(o,e)), +mouseDetectionEnabled=!0}}function 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i=this.activatedItems[e].dataSM("sub");i&&this.menuHide(i)}},menuInit:function(t){if(!t.dataSM("in-mega")){ +t.hasClass("mega-menu")&&t.find("ul").dataSM("in-mega",!0);for(var e=2,i=t[0];(i=i.parentNode.parentNode)!=this.$root[0];)e++;var s=t.prevAll("a").eq(-1);s.length||(s=t.prevAll().find("a").eq(-1)),s.addClass("has-submenu").dataSM("sub",t),t.dataSM("parent-a",s).dataSM("level",e).parent().dataSM("sub",t);var o=s.attr("id")||this.accessIdPrefix+ ++this.idInc,a=t.attr("id")||this.accessIdPrefix+ ++this.idInc;s.attr({id:o,"aria-haspopup":"true","aria-controls":a,"aria-expanded":"false"}),t.attr({id:a,role:"group","aria-hidden":"true","aria-labelledby":o,"aria-expanded":"false"}),this.opts.subIndicators&&s[this.opts.subIndicatorsPos](this.$subArrow.clone())}},menuPosition:function(t){var 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a/doc/html/lidar_2include_2random_8h_source.html +++ b/doc/html/lidar_2include_2random_8h_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    random.h
    @@ -149,7 +161,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/lidar_2src_2file_i_o_8cpp.html b/doc/html/lidar_2src_2file_i_o_8cpp.html index 70c4bf53a..851721a53 100644 --- a/doc/html/lidar_2src_2file_i_o_8cpp.html +++ b/doc/html/lidar_2src_2file_i_o_8cpp.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    fileIO.cpp File Reference
    @@ -106,7 +118,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/lidar_2src_2file_i_o_8cpp_source.html b/doc/html/lidar_2src_2file_i_o_8cpp_source.html index 93b3ad66a..f94964c16 100644 --- a/doc/html/lidar_2src_2file_i_o_8cpp_source.html +++ b/doc/html/lidar_2src_2file_i_o_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    fileIO.cpp
    @@ -99,10 +111,13 @@
    19using namespace helios;
    20using namespace std;
    21
    +
    22void LiDARcloud::loadXML( const char* filename ){
    23 loadXML( filename, false );
    24}
    +
    25
    +
    26void LiDARcloud::loadXML( const char* filename, bool load_grid_only ){
    27
    28 if( printmessages ){
    @@ -469,6 +484,7 @@
    389 }
    390
    391}
    +
    392
    393size_t LiDARcloud::loadASCIIFile( uint scanID, ScanMetadata &scandata ){
    394
    @@ -576,6 +592,7 @@
    496
    497}
    498
    +
    499void LiDARcloud::exportTriangleNormals( const char* filename ){
    500
    501 ofstream file;
    @@ -604,7 +621,9 @@
    524 file.close();
    525
    526}
    +
    527
    +
    528void LiDARcloud::exportTriangleNormals( const char* filename, int gridcell ){
    529
    530 ofstream file;
    @@ -638,7 +657,9 @@
    558
    559
    560}
    +
    561
    +
    562void LiDARcloud::exportTriangleAreas( const char* filename ){
    563
    564 ofstream file;
    @@ -660,7 +681,9 @@
    580 file.close();
    581
    582}
    +
    583
    +
    584void LiDARcloud::exportTriangleAreas( const char* filename, int gridcell ){
    585
    586 ofstream file;
    @@ -686,7 +709,9 @@
    606 file.close();
    607
    608}
    +
    609
    +
    610void LiDARcloud::exportTriangleInclinationDistribution( const char* filename, uint Nbins ){
    611
    612 std::vector<std::vector<float>> inclinations( getGridCellCount() );
    @@ -744,7 +769,9 @@
    664 file.close();
    665
    666}
    +
    667
    +
    668void LiDARcloud::exportLeafAreas( const char* filename ){
    669
    670 ofstream file;
    @@ -764,7 +791,9 @@
    684 file.close();
    685
    686}
    +
    687
    +
    688void LiDARcloud::exportLeafAreaDensities( const char* filename ){
    689
    690 ofstream file;
    @@ -784,7 +813,9 @@
    704 file.close();
    705
    706}
    +
    707
    +
    708void LiDARcloud::exportGtheta( const char* filename ){
    709
    710 ofstream file;
    @@ -804,7 +835,9 @@
    724 file.close();
    725
    726}
    +
    727
    +
    728void LiDARcloud::exportPointCloud( const char* filename ){
    729
    730 if(getScanCount() ==1 ){
    @@ -831,8 +864,10 @@
    751
    752 }
    753}
    +
    754
    755
    +
    756void LiDARcloud::exportPointCloud( const char* filename, uint scanID ){
    757
    758 if( scanID> getScanCount()){
    @@ -919,7 +954,9 @@
    839 file.close();
    840
    841}
    +
    842
    +
    843void LiDARcloud::exportPointCloudPTX( const char* filename, uint scanID ){
    844
    845 if( scanID> getScanCount()){
    @@ -997,83 +1034,85 @@
    917 file.close();
    918
    919}
    +
    920
    -
    LiDARcloud::coordinateRotation
    void coordinateRotation(const helios::SphericalCoord &rotation)
    Rotate all points in the point cloud about the origin.
    Definition: LiDAR.cpp:464
    -
    LiDARcloud::getHitData
    double getHitData(uint index, const char *label) const
    Set floating point data value associated with a hit point.
    Definition: LiDAR.cpp:345
    -
    LiDARcloud::getGridCellCount
    uint getGridCellCount() const
    Get the number of cells in the grid.
    Definition: LiDAR.cpp:1791
    -
    LiDARcloud::exportPointCloud
    void exportPointCloud(const char *filename)
    Export to file all points in the point cloud to an ASCII text file following the column format specif...
    Definition: fileIO.cpp:728
    -
    LiDARcloud::getCellLeafAreaDensity
    float getCellLeafAreaDensity(uint index) const
    Get the leaf area density of a grid cell in 1/m.
    Definition: LiDAR.cpp:1938
    -
    LiDARcloud::getScanSizeTheta
    uint getScanSizeTheta(uint scanID) const
    Get the number of scan points in the theta (zenithal) direction.
    Definition: LiDAR.cpp:265
    -
    LiDARcloud::exportTriangleAreas
    void exportTriangleAreas(const char *filename)
    Export to file the area of all triangles formed.
    Definition: fileIO.cpp:562
    -
    LiDARcloud::getCellGtheta
    float getCellGtheta(uint index) const
    Get the G(theta) of a grid cell.
    Definition: LiDAR.cpp:1959
    -
    LiDARcloud::getHitScanID
    int getHitScanID(uint index) const
    Get the scan with which a hit is associated.
    Definition: LiDAR.cpp:385
    -
    LiDARcloud::getHitCount
    uint getHitCount() const
    Get the number of hit points in the point cloud.
    Definition: LiDAR.cpp:254
    -
    LiDARcloud::loadXML
    void loadXML(const char *filename)
    Read an XML file containing scan information.
    Definition: fileIO.cpp:22
    -
    LiDARcloud::exportLeafAreaDensities
    void exportLeafAreaDensities(const char *filename)
    Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid...
    Definition: fileIO.cpp:688
    -
    LiDARcloud::addHitPoint
    void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
    Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
    Definition: LiDAR.cpp:171
    -
    LiDARcloud::coordinateShift
    void coordinateShift(const helios::vec3 &shift)
    Apply a translation to all points in the point cloud.
    Definition: LiDAR.cpp:436
    -
    LiDARcloud::exportLeafAreas
    void exportLeafAreas(const char *filename)
    Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
    Definition: fileIO.cpp:668
    -
    LiDARcloud::getScanOrigin
    helios::vec3 getScanOrigin(uint scanID) const
    Get the (x,y,z) scan origin.
    Definition: LiDAR.cpp:258
    -
    LiDARcloud::getHitRaydir
    helios::SphericalCoord getHitRaydir(uint index) const
    Get ray direction of hit point in the scan based on its index.
    Definition: LiDAR.cpp:324
    -
    LiDARcloud::getScanCount
    uint getScanCount()
    Get number of scans in point cloud.
    Definition: LiDAR.cpp:135
    -
    LiDARcloud::exportTriangleInclinationDistribution
    void exportTriangleInclinationDistribution(const char *filename, uint Nbins)
    Export to file discrete area-weighted inclination angle probability distribution based on the triangu...
    Definition: fileIO.cpp:610
    -
    LiDARcloud::getScanSizePhi
    uint getScanSizePhi(uint scanID) const
    Get the number of scan points in the phi (azimuthal) direction.
    Definition: LiDAR.cpp:272
    -
    LiDARcloud::getHitColor
    helios::RGBcolor getHitColor(uint index) const
    Get color of hit point.
    Definition: LiDAR.cpp:375
    -
    LiDARcloud::addScan
    uint addScan(ScanMetadata &newscan)
    Add a LiDAR scan to the point cloud.
    Definition: LiDAR.cpp:139
    -
    LiDARcloud::getScanColumnFormat
    std::vector< std::string > getScanColumnFormat(uint scanID) const
    Get the labels for columns in ASCII input/output file.
    Definition: LiDAR.cpp:307
    -
    LiDARcloud::exportPointCloudPTX
    void exportPointCloudPTX(const char *filename, uint scanID)
    Export to file all points from a given scan to PTX file.
    Definition: fileIO.cpp:843
    -
    LiDARcloud::getHitXYZ
    helios::vec3 getHitXYZ(uint index) const
    Get (x,y,z) coordinate of hit point by index.
    Definition: LiDAR.cpp:314
    -
    LiDARcloud::addGridCell
    void addGridCell(const helios::vec3 &center, const helios::vec3 &size, float rotation)
    Add a cell to the grid.
    Definition: LiDAR.cpp:1795
    -
    LiDARcloud::getCellLeafArea
    float getCellLeafArea(uint index) const
    Get the leaf area of a grid cell in m^2.
    Definition: LiDAR.cpp:1928
    -
    LiDARcloud::exportTriangleNormals
    void exportTriangleNormals(const char *filename)
    Export to file the normal vectors (nx,ny,nz) for all triangles formed.
    Definition: fileIO.cpp:499
    -
    LiDARcloud::distanceFilter
    void distanceFilter(float maxdistance)
    Filter scan by imposing a maximum distance from the scanner.
    Definition: LiDAR.cpp:1035
    -
    LiDARcloud::exportGtheta
    void exportGtheta(const char *filename)
    Export to file the G(theta) value within each grid cell. Lines of the file correspond to each grid ce...
    Definition: fileIO.cpp:708
    -
    helios::helios_runtime_error
    void helios_runtime_error(const std::string &error_message)
    Function to throw a runtime error.
    Definition: global.cpp:29
    -
    helios::rotatePoint
    vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
    Function to rotate a 3D vector given spherical angles elevation and azimuth.
    Definition: global.cpp:79
    -
    helios::string2vec2
    vec2 string2vec2(const char *str)
    Convert a space-delimited string into a vec2 vector.
    Definition: global.cpp:623
    -
    helios::string2int2
    int2 string2int2(const char *str)
    Convert a space-delimited string into an int2 vector.
    Definition: global.cpp:683
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition: global.cpp:576
    -
    helios::string2vec3
    vec3 string2vec3(const char *str)
    Convert a space-delimited string into a vec3 vector.
    Definition: global.cpp:643
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::deblank
    std::string deblank(const char *input)
    Remove all whitespace from character array.
    Definition: global.cpp:994
    -
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition: helios_vector_types.h:954
    -
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition: helios_vector_types.h:198
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition: helios_vector_types.h:599
    -
    helios::make_vec4
    vec4 make_vec4(float x, float y, float z, float w)
    Make a vec4 from three floats.
    Definition: helios_vector_types.h:763
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    ScanMetadata
    Structure containing metadata for a terrestrial scan.
    Definition: LiDAR.h:188
    -
    ScanMetadata::origin
    helios::vec3 origin
    (x,y,z) coordinate of scanner location
    Definition: LiDAR.h:235
    -
    ScanMetadata::data_file
    std::string data_file
    File containing hit point data.
    Definition: LiDAR.h:206
    -
    ScanMetadata::columnFormat
    std::vector< std::string > columnFormat
    Vector of strings specifying the columns of the scan ASCII file for input/output.
    Definition: LiDAR.h:250
    - -
    helios::RGBcolor
    R-G-B color vector.
    Definition: helios_vector_types.h:844
    -
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition: helios_vector_types.h:855
    -
    helios::RGBcolor::r
    float r
    Red color component.
    Definition: helios_vector_types.h:849
    -
    helios::RGBcolor::g
    float g
    Green color component.
    Definition: helios_vector_types.h:852
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    -
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition: helios_vector_types.h:1553
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::int2
    Vector of two elements of type 'int'.
    Definition: helios_vector_types.h:44
    -
    helios::int2::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:50
    -
    helios::int2::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:48
    -
    helios::int3
    Vector of three elements of type 'int'.
    Definition: helios_vector_types.h:146
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec2::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:350
    -
    helios::vec2::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:352
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:511
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    -
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition: helios_vector_types.h:526
    +
    LiDARcloud::coordinateRotation
    void coordinateRotation(const helios::SphericalCoord &rotation)
    Rotate all points in the point cloud about the origin.
    Definition LiDAR.cpp:464
    +
    LiDARcloud::getHitData
    double getHitData(uint index, const char *label) const
    Set floating point data value associated with a hit point.
    Definition LiDAR.cpp:345
    +
    LiDARcloud::getGridCellCount
    uint getGridCellCount() const
    Get the number of cells in the grid.
    Definition LiDAR.cpp:1791
    +
    LiDARcloud::exportPointCloud
    void exportPointCloud(const char *filename)
    Export to file all points in the point cloud to an ASCII text file following the column format specif...
    Definition fileIO.cpp:728
    +
    LiDARcloud::getCellLeafAreaDensity
    float getCellLeafAreaDensity(uint index) const
    Get the leaf area density of a grid cell in 1/m.
    Definition LiDAR.cpp:1938
    +
    LiDARcloud::getScanSizeTheta
    uint getScanSizeTheta(uint scanID) const
    Get the number of scan points in the theta (zenithal) direction.
    Definition LiDAR.cpp:265
    +
    LiDARcloud::exportTriangleAreas
    void exportTriangleAreas(const char *filename)
    Export to file the area of all triangles formed.
    Definition fileIO.cpp:562
    +
    LiDARcloud::getCellGtheta
    float getCellGtheta(uint index) const
    Get the G(theta) of a grid cell.
    Definition LiDAR.cpp:1959
    +
    LiDARcloud::getHitScanID
    int getHitScanID(uint index) const
    Get the scan with which a hit is associated.
    Definition LiDAR.cpp:385
    +
    LiDARcloud::getHitCount
    uint getHitCount() const
    Get the number of hit points in the point cloud.
    Definition LiDAR.cpp:254
    +
    LiDARcloud::loadXML
    void loadXML(const char *filename)
    Read an XML file containing scan information.
    Definition fileIO.cpp:22
    +
    LiDARcloud::exportLeafAreaDensities
    void exportLeafAreaDensities(const char *filename)
    Export to file the leaf area density within each grid cell. Lines of the file correspond to each grid...
    Definition fileIO.cpp:688
    +
    LiDARcloud::addHitPoint
    void addHitPoint(uint scanID, const helios::vec3 &xyz, const helios::SphericalCoord &direction)
    Specify a scan point as a hit by providing the (x,y,z) coordinates and scan ray direction.
    Definition LiDAR.cpp:171
    +
    LiDARcloud::coordinateShift
    void coordinateShift(const helios::vec3 &shift)
    Apply a translation to all points in the point cloud.
    Definition LiDAR.cpp:436
    +
    LiDARcloud::exportLeafAreas
    void exportLeafAreas(const char *filename)
    Export to file the leaf area within each grid cell. Lines of the file correspond to each grid cell.
    Definition fileIO.cpp:668
    +
    LiDARcloud::getScanOrigin
    helios::vec3 getScanOrigin(uint scanID) const
    Get the (x,y,z) scan origin.
    Definition LiDAR.cpp:258
    +
    LiDARcloud::getHitRaydir
    helios::SphericalCoord getHitRaydir(uint index) const
    Get ray direction of hit point in the scan based on its index.
    Definition LiDAR.cpp:324
    +
    LiDARcloud::getScanCount
    uint getScanCount()
    Get number of scans in point cloud.
    Definition LiDAR.cpp:135
    +
    LiDARcloud::exportTriangleInclinationDistribution
    void exportTriangleInclinationDistribution(const char *filename, uint Nbins)
    Export to file discrete area-weighted inclination angle probability distribution based on the triangu...
    Definition fileIO.cpp:610
    +
    LiDARcloud::getScanSizePhi
    uint getScanSizePhi(uint scanID) const
    Get the number of scan points in the phi (azimuthal) direction.
    Definition LiDAR.cpp:272
    +
    LiDARcloud::getHitColor
    helios::RGBcolor getHitColor(uint index) const
    Get color of hit point.
    Definition LiDAR.cpp:375
    +
    LiDARcloud::addScan
    uint addScan(ScanMetadata &newscan)
    Add a LiDAR scan to the point cloud.
    Definition LiDAR.cpp:139
    +
    LiDARcloud::getScanColumnFormat
    std::vector< std::string > getScanColumnFormat(uint scanID) const
    Get the labels for columns in ASCII input/output file.
    Definition LiDAR.cpp:307
    +
    LiDARcloud::exportPointCloudPTX
    void exportPointCloudPTX(const char *filename, uint scanID)
    Export to file all points from a given scan to PTX file.
    Definition fileIO.cpp:843
    +
    LiDARcloud::getHitXYZ
    helios::vec3 getHitXYZ(uint index) const
    Get (x,y,z) coordinate of hit point by index.
    Definition LiDAR.cpp:314
    +
    LiDARcloud::addGridCell
    void addGridCell(const helios::vec3 &center, const helios::vec3 &size, float rotation)
    Add a cell to the grid.
    Definition LiDAR.cpp:1795
    +
    LiDARcloud::getCellLeafArea
    float getCellLeafArea(uint index) const
    Get the leaf area of a grid cell in m^2.
    Definition LiDAR.cpp:1928
    +
    LiDARcloud::exportTriangleNormals
    void exportTriangleNormals(const char *filename)
    Export to file the normal vectors (nx,ny,nz) for all triangles formed.
    Definition fileIO.cpp:499
    +
    LiDARcloud::distanceFilter
    void distanceFilter(float maxdistance)
    Filter scan by imposing a maximum distance from the scanner.
    Definition LiDAR.cpp:1035
    +
    LiDARcloud::exportGtheta
    void exportGtheta(const char *filename)
    Export to file the G(theta) value within each grid cell. Lines of the file correspond to each grid ce...
    Definition fileIO.cpp:708
    +
    helios::helios_runtime_error
    void helios_runtime_error(const std::string &error_message)
    Function to throw a runtime error.
    Definition global.cpp:29
    +
    helios::rotatePoint
    vec3 rotatePoint(const vec3 &position, const SphericalCoord &rotation)
    Function to rotate a 3D vector given spherical angles elevation and azimuth.
    Definition global.cpp:79
    +
    helios::string2vec2
    vec2 string2vec2(const char *str)
    Convert a space-delimited string into a vec2 vector.
    Definition global.cpp:623
    +
    helios::string2int2
    int2 string2int2(const char *str)
    Convert a space-delimited string into an int2 vector.
    Definition global.cpp:683
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition global.cpp:576
    +
    helios::string2vec3
    vec3 string2vec3(const char *str)
    Convert a space-delimited string into a vec3 vector.
    Definition global.cpp:643
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::deblank
    std::string deblank(const char *input)
    Remove all whitespace from character array.
    Definition global.cpp:994
    +
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition helios_vector_types.h:954
    +
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition helios_vector_types.h:198
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition helios_vector_types.h:599
    +
    helios::make_vec4
    vec4 make_vec4(float x, float y, float z, float w)
    Make a vec4 from three floats.
    Definition helios_vector_types.h:763
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    ScanMetadata
    Structure containing metadata for a terrestrial scan.
    Definition LiDAR.h:188
    +
    ScanMetadata::origin
    helios::vec3 origin
    (x,y,z) coordinate of scanner location
    Definition LiDAR.h:235
    +
    ScanMetadata::data_file
    std::string data_file
    File containing hit point data.
    Definition LiDAR.h:206
    +
    ScanMetadata::columnFormat
    std::vector< std::string > columnFormat
    Vector of strings specifying the columns of the scan ASCII file for input/output.
    Definition LiDAR.h:250
    + +
    helios::RGBcolor
    R-G-B color vector.
    Definition helios_vector_types.h:844
    +
    helios::RGBcolor::b
    float b
    Blue color component.
    Definition helios_vector_types.h:855
    +
    helios::RGBcolor::r
    float r
    Red color component.
    Definition helios_vector_types.h:849
    +
    helios::RGBcolor::g
    float g
    Green color component.
    Definition helios_vector_types.h:852
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    +
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition helios_vector_types.h:1553
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::int2
    Vector of two elements of type 'int'.
    Definition helios_vector_types.h:44
    +
    helios::int2::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:50
    +
    helios::int2::x
    int x
    First element in vector.
    Definition helios_vector_types.h:48
    +
    helios::int3
    Vector of three elements of type 'int'.
    Definition helios_vector_types.h:146
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec2::x
    float x
    First element in vector.
    Definition helios_vector_types.h:350
    +
    helios::vec2::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:352
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
    +
    helios::vec3::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:511
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    +
    helios::vec3::magnitude
    float magnitude() const
    Compute the vector magnitude.
    Definition helios_vector_types.h:526
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/main_8cpp_source.html b/doc/html/main_8cpp_source.html index 4758c2b4b..146120074 100644 --- a/doc/html/main_8cpp_source.html +++ b/doc/html/main_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    main.cpp
    @@ -183,31 +195,32 @@ -
    RadiationModel
    Radiation transport model plugin.
    Definition: RadiationModel.h:263
    - -
    Visualizer
    Class for visualization of simulation results.
    Definition: Visualizer.h:265
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::scalePrimitiveData
    void scalePrimitiveData(const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
    Multiply primitive data values by a constant scaling factor for a subset of primitives.
    Definition: Context_data.cpp:1812
    -
    helios::Context::loadPLY
    std::vector< uint > loadPLY(const char *filename, bool silent=false)
    Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
    Definition: Context_fileIO.cpp:3378
    -
    helios::Context::loadTabularTimeseriesData
    void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
    Load tabular weather data from text file into timeseries.
    Definition: Context_fileIO.cpp:4552
    -
    helios::Context::setDate
    void setDate(int day, int month, int year)
    Set simulation date by day, month, year.
    Definition: Context.cpp:1059
    -
    helios::Context::getTime
    helios::Time getTime() const
    Get the simulation time.
    Definition: Context.cpp:1166
    -
    helios::Context::duplicatePrimitiveData
    void duplicatePrimitiveData(uint UUID, const char *old_label, const char *new_label)
    Duplicate/copy primitive data.
    Definition: Context_data.cpp:1229
    -
    helios::Context::getDate
    helios::Date getDate() const
    Get simulation date.
    Definition: Context.cpp:1099
    -
    helios::Context::getAllUUIDs
    std::vector< uint > getAllUUIDs() const
    Get all primitive UUIDs currently in the Context.
    Definition: Context.cpp:1763
    -
    helios::Context::setPrimitiveData
    void setPrimitiveData(const uint &UUID, const char *label, const int &data)
    Add data value (int) associated with a primitive element.
    Definition: Context_data.cpp:655
    -
    helios::Context::setTime
    void setTime(int minute, int hour)
    Set simulation time.
    Definition: Context.cpp:1136
    -
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition: Context.cpp:5809
    -
    helios::wait
    void wait(float seconds)
    Wait/sleep for a specified amount of time.
    Definition: global.cpp:306
    -
    helios::Context::setCurrentTimeseriesPoint
    void setCurrentTimeseriesPoint(const char *label, uint index)
    Set the Context date and time by providing the index of a timeseries data point.
    Definition: Context.cpp:1886
    -
    helios::Context::queryTimeseriesData
    float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
    Get a timeseries data point by specifying a date and time vector.
    Definition: Context.cpp:1894
    -
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition: helios_vector_types.h:99
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    +
    RadiationModel
    Radiation transport model plugin.
    Definition RadiationModel.h:263
    + +
    Visualizer
    Class for visualization of simulation results.
    Definition Visualizer.h:275
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::scalePrimitiveData
    void scalePrimitiveData(const std::vector< uint > &UUIDs, const std::string &label, float scaling_factor)
    Multiply primitive data values by a constant scaling factor for a subset of primitives.
    Definition Context_data.cpp:1812
    +
    helios::Context::loadPLY
    std::vector< uint > loadPLY(const char *filename, bool silent=false)
    Load geometry contained in a Stanford polygon file (.ply). Model will be placed at the origin with no...
    Definition Context_fileIO.cpp:3378
    +
    helios::Context::loadTabularTimeseriesData
    void loadTabularTimeseriesData(const std::string &data_file, const std::vector< std::string > &column_labels, const std::string &delimiter, const std::string &date_string_format="YYYYMMDD", uint headerlines=0)
    Load tabular weather data from text file into timeseries.
    Definition Context_fileIO.cpp:4552
    +
    helios::Context::setDate
    void setDate(int day, int month, int year)
    Set simulation date by day, month, year.
    Definition Context.cpp:1059
    +
    helios::Context::getTime
    helios::Time getTime() const
    Get the simulation time.
    Definition Context.cpp:1166
    +
    helios::Context::duplicatePrimitiveData
    void duplicatePrimitiveData(uint UUID, const char *old_label, const char *new_label)
    Duplicate/copy primitive data.
    Definition Context_data.cpp:1229
    +
    helios::Context::getDate
    helios::Date getDate() const
    Get simulation date.
    Definition Context.cpp:1099
    +
    helios::Context::getAllUUIDs
    std::vector< uint > getAllUUIDs() const
    Get all primitive UUIDs currently in the Context.
    Definition Context.cpp:1763
    +
    helios::Context::setPrimitiveData
    void setPrimitiveData(const uint &UUID, const char *label, const int &data)
    Add data value (int) associated with a primitive element.
    Definition Context_data.cpp:655
    +
    helios::Context::setTime
    void setTime(int minute, int hour)
    Set simulation time.
    Definition Context.cpp:1136
    +
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition Context.cpp:5809
    +
    helios::wait
    void wait(float seconds)
    Wait/sleep for a specified amount of time.
    Definition global.cpp:306
    +
    helios::Context::setCurrentTimeseriesPoint
    void setCurrentTimeseriesPoint(const char *label, uint index)
    Set the Context date and time by providing the index of a timeseries data point.
    Definition Context.cpp:1886
    +
    helios::Context::queryTimeseriesData
    float queryTimeseriesData(const char *label, const Date &date, const Time &time) const
    Get a timeseries data point by specifying a date and time vector.
    Definition Context.cpp:1894
    +
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition helios_vector_types.h:99
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/menu.js b/doc/html/menu.js index b0b26936a..0fd1e9901 100644 --- a/doc/html/menu.js +++ b/doc/html/menu.js @@ -22,15 +22,14 @@ @licend The above is the entire license notice for the JavaScript code in this file */ -function initMenu(relPath,searchEnabled,serverSide,searchPage,search) { +function initMenu(relPath,searchEnabled,serverSide,searchPage,search,treeview) { function makeTree(data,relPath) { - var result=''; + let result=''; if ('children' in data) { result+='
      '; - for (var i in data.children) { - var url; - var link; - link = data.children[i].url; + for (let i in data.children) { + let url; + const link = data.children[i].url; if (link.substring(0,1)=='^') { url = link.substring(1); } else { @@ -44,7 +43,7 @@ function initMenu(relPath,searchEnabled,serverSide,searchPage,search) { } return result; } - var searchBoxHtml; + let searchBoxHtml; if (searchEnabled) { if (serverSide) { searchBoxHtml='
      '+ @@ -88,29 +87,28 @@ function initMenu(relPath,searchEnabled,serverSide,searchPage,search) { if (searchBoxHtml) { $('#main-menu').append('
    • '); } - var $mainMenuState = $('#main-menu-state'); - var prevWidth = 0; + const $mainMenuState = $('#main-menu-state'); + let prevWidth = 0; if ($mainMenuState.length) { - function initResizableIfExists() { - if (typeof initResizable==='function') initResizable(); + const initResizableIfExists = function() { + if (typeof initResizable==='function') initResizable(treeview); } // animate mobile menu - $mainMenuState.change(function(e) { - var $menu = $('#main-menu'); - var options = { duration: 250, step: initResizableIfExists }; + $mainMenuState.change(function() { + const $menu = $('#main-menu'); + let options = { duration: 250, step: initResizableIfExists }; if (this.checked) { - options['complete'] = function() { $menu.css('display', 'block') }; + options['complete'] = () => $menu.css('display', 'block'); $menu.hide().slideDown(options); } else { - options['complete'] = function() { $menu.css('display', 'none') }; + options['complete'] = () => $menu.css('display', 'none'); $menu.show().slideUp(options); } }); // set default menu visibility - function resetState() { - var $menu = $('#main-menu'); - var $mainMenuState = $('#main-menu-state'); - var newWidth = $(window).outerWidth(); + const resetState = function() { + const $menu = $('#main-menu'); + const newWidth = $(window).outerWidth(); if (newWidth!=prevWidth) { if ($(window).outerWidth()<768) { $mainMenuState.prop('checked',false); $menu.hide(); diff --git a/doc/html/menudata.js b/doc/html/menudata.js index f82847a23..745ea0397 100644 --- a/doc/html/menudata.js +++ b/doc/html/menudata.js @@ -32,7 +32,6 @@ var menudata={children:[ {text:"Tutorials",url:"_tutorials.html"}]}, {text:"Plug-ins",url:"_plug_ins.html"}, {text:"Related Pages",url:"pages.html"}, -{text:"Modules",url:"modules.html"}, {text:"Data Structures",url:"annotated.html",children:[ {text:"Data Structures",url:"annotated.html"}, {text:"Data Structure Index",url:"classes.html"}, @@ -115,29 +114,33 @@ var menudata={children:[ {text:"z",url:"functions_vars_z.html#index_z"}]}, {text:"Enumerations",url:"functions_enum.html"}, {text:"Enumerator",url:"functions_eval.html"}, -{text:"Related Functions",url:"functions_rela.html"}]}]}, +{text:"Related Symbols",url:"functions_rela.html"}]}]}, {text:"Files",url:"files.html",children:[ {text:"File List",url:"files.html"}, {text:"Globals",url:"globals.html",children:[ {text:"All",url:"globals.html",children:[ {text:"b",url:"globals.html#index_b"}, +{text:"c",url:"globals.html#index_c"}, {text:"d",url:"globals.html#index_d"}, {text:"e",url:"globals.html#index_e"}, {text:"g",url:"globals.html#index_g"}, {text:"i",url:"globals.html#index_i"}, {text:"m",url:"globals.html#index_m"}, {text:"r",url:"globals.html#index_r"}, +{text:"s",url:"globals.html#index_s"}, {text:"t",url:"globals.html#index_t"}, {text:"v",url:"globals.html#index_v"}, {text:"w",url:"globals.html#index_w"}]}, {text:"Functions",url:"globals_func.html",children:[ {text:"b",url:"globals_func.html#index_b"}, +{text:"c",url:"globals_func.html#index_c"}, {text:"d",url:"globals_func.html#index_d"}, {text:"e",url:"globals_func.html#index_e"}, {text:"g",url:"globals_func.html#index_g"}, {text:"i",url:"globals_func.html#index_i"}, {text:"m",url:"globals_func.html#index_m"}, {text:"r",url:"globals_func.html#index_r"}, +{text:"s",url:"globals_func.html#index_s"}, {text:"t",url:"globals_func.html#index_t"}, {text:"v",url:"globals_func.html#index_v"}, {text:"w",url:"globals_func.html#index_w"}]}, diff --git a/doc/html/minus.svg b/doc/html/minus.svg new file mode 100644 index 000000000..f70d0c1a1 --- /dev/null +++ b/doc/html/minus.svg @@ -0,0 +1,8 @@ + + + + + + + + diff --git a/doc/html/minusd.svg b/doc/html/minusd.svg new file mode 100644 index 000000000..5f8e87962 --- /dev/null +++ b/doc/html/minusd.svg @@ -0,0 +1,8 @@ + + + + + + + + diff --git a/doc/html/modules.html b/doc/html/modules.html deleted file mode 100644 index e80ad8e65..000000000 --- a/doc/html/modules.html +++ /dev/null @@ -1,106 +0,0 @@ - - - - - - - -.: Helios Documentation - - - - - - - - - - - - - - - -
      -
      - - - - - - - -
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       v1.3.25 -
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      Here is a list of all modules:
      - - - - - - -
       TimeseriesTimeseries-related functions
       Utility functionsMiscellaneous helper functions
       Geometric PrimitivesBasic geometric objects to construct the domain
       Compound ObjectsGeometric objects comprised of multiple primitives
       VectorsVector data structures
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      - - diff --git a/doc/html/navtree.css b/doc/html/navtree.css new file mode 100644 index 000000000..6b1e5e46b --- /dev/null +++ b/doc/html/navtree.css @@ -0,0 +1,149 @@ +#nav-tree .children_ul { + margin:0; + padding:4px; +} + +#nav-tree ul { + list-style:none outside none; + margin:0px; + padding:0px; +} + +#nav-tree li { + white-space:nowrap; + margin:0px; + padding:0px; +} + +#nav-tree .plus { + margin:0px; +} + +#nav-tree .selected { + background-image: url('tab_a.png'); + background-repeat:repeat-x; + color: white; + text-shadow: 0px 1px 1px rgba(0, 0, 0, 1.0); +} + +#nav-tree .selected .arrow { + color: #9CAFD4; + text-shadow: none; +} + +#nav-tree img { + margin:0px; + padding:0px; + border:0px; + vertical-align: middle; +} + +#nav-tree a { + text-decoration:none; + padding:0px; + margin:0px; +} + +#nav-tree .label { + margin:0px; + padding:0px; + font: 12px 'Lucida Grande',Geneva,Helvetica,Arial,sans-serif; +} + +#nav-tree .label a { + padding:2px; +} + +#nav-tree .selected a { + text-decoration:none; + color:white; +} + +#nav-tree .children_ul { + margin:0px; + padding:0px; +} + +#nav-tree .item { + margin:0px; + padding:0px; +} + +#nav-tree { + padding: 0px 0px; + font-size:14px; + overflow:auto; +} + +#doc-content { + overflow:auto; + display:block; + padding:0px; + margin:0px; + -webkit-overflow-scrolling : touch; /* iOS 5+ */ +} + +#side-nav { + padding:0 6px 0 0; + margin: 0px; + display:block; + position: absolute; + left: 0px; + width: $width; + overflow : hidden; +} + +.ui-resizable .ui-resizable-handle { + display:block; +} + +.ui-resizable-e { + background-image:url('splitbar.png'); + background-size:100%; + background-repeat:repeat-y; + background-attachment: scroll; + cursor:ew-resize; + height:100%; + right:0; + top:0; + width:6px; +} + +.ui-resizable-handle { + display:none; + font-size:0.1px; + position:absolute; + z-index:1; +} + +#nav-tree-contents { + margin: 6px 0px 0px 0px; +} + +#nav-tree { + background-repeat:repeat-x; + background-color: #F9FAFC; + -webkit-overflow-scrolling : touch; /* iOS 5+ */ +} + +#nav-sync { + position:absolute; + top:5px; + right:24px; + z-index:0; +} + +#nav-sync img { + opacity:0.3; +} + +#nav-sync img:hover { + opacity:0.9; +} + +@media print +{ + #nav-tree { display: none; } + div.ui-resizable-handle { display: none; position: relative; } +} + diff --git a/doc/html/pages.html b/doc/html/pages.html index c613297c6..d68c36b9e 100644 --- a/doc/html/pages.html +++ b/doc/html/pages.html @@ -38,31 +38,43 @@ Logo -
       v1.3.25 +
       v1.3.26
      - + + +
      +
      +
      Here is a list of all related documentation pages:
      -
      [detail level 12]
      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - +
      [detail level 12]
       ▼Using the CLion IDE with Helios
       ▼Tutorials
       ►Tutorial 0: Context Self-Test Tutorial
       ►Tutorial 1: Helios Vector Types Tutorial
       ►Tutorial 2: Working with Context Geometry
       ►Tutorial 5: Primitive Data
       ►Tutorial 6: Global Data
       ►Tutorial 7: Visualizer Basics
       ►Tutorial 8: Visualizing primitive data values
       ►Tutorial 10: Radiation model basics - tree light interception
       ►Tutorial 11: Light interception and fraction of sunlit/shaded leaf area for a homogeneous canopy
       ▼Overview
       ▼Plug-ins
       ►Visualizer Plugin Documentation
       ►Weber-Penn Tree Plugin Documentation
       ►Radiation Model Plugin Documentation
       ►Energy Balance Model Plugin Documentation
       ►Boundary-Layer Conductance Model Plugin Documentation
       ►LiDAR Point Cloud Plugin Documentation
       ►Aerial LiDAR Point Cloud Plugin Documentation
       ►Photosynthesis Model Plugin Documentation
       ►Stomatal Conductance Model Plugin Documentation
       ►Solar Position Plugin Documentation
       ►Voxel Intersection Plugin Documentation
       ►Canopy Generator Plugin Documentation
       ►Plant Architecture Model Plugin Documentation
       ▼Install and Set-up
       ▼User/API Guide
       ▼File Input/Output
       ▼Writing Plugins
       ▼Making texture mask files with transparency using GIMP
      + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - + - +
       Using the CLion IDE with Helios
       ▼Tutorials
       Tutorial 0: Context Self-Test Tutorial
       Tutorial 1: Helios Vector Types Tutorial
       Tutorial 2: Working with Context Geometry
       Tutorial 5: Primitive Data
       Tutorial 6: Global Data
       Tutorial 7: Visualizer Basics
       Tutorial 8: Visualizing primitive data values
       Tutorial 10: Radiation model basics - tree light interception
       Tutorial 11: Light interception and fraction of sunlit/shaded leaf area for a homogeneous canopy
       Overview
       ▼Plug-ins
       Visualizer Plugin Documentation
       Weber-Penn Tree Plugin Documentation
       Radiation Model Plugin Documentation
       Energy Balance Model Plugin Documentation
       Boundary-Layer Conductance Model Plugin Documentation
       LiDAR Point Cloud Plugin Documentation
       Aerial LiDAR Point Cloud Plugin Documentation
       Photosynthesis Model Plugin Documentation
       Stomatal Conductance Model Plugin Documentation
       Solar Position Plugin Documentation
       Voxel Intersection Plugin Documentation
       Canopy Generator Plugin Documentation
       Plant Architecture Model Plugin Documentation
       Install and Set-up
       User/API Guide
       File Input/Output
       Writing Plugins
       Making texture mask files with transparency using GIMP
       Converting polygon file formats to .ply using Blender
       ▼Choosing the right CUDA and OptiX version
       Choosing the right CUDA and OptiX version
       Increasing graphics driver timeout
       ▼Dummy Model Plugin Documentation
       Dummy Model Plugin Documentation
      -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
      +
      diff --git a/doc/html/plugins_2lidar_2src_2self_test_8cpp.html b/doc/html/plugins_2lidar_2src_2self_test_8cpp.html index 24ea485d9..a7bd7113c 100644 --- a/doc/html/plugins_2lidar_2src_2self_test_8cpp.html +++ b/doc/html/plugins_2lidar_2src_2self_test_8cpp.html @@ -38,30 +38,41 @@ Logo -
       v1.3.25 +
       v1.3.26
      - + + + +
    +
    selfTest.cpp File Reference
    @@ -105,7 +117,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plugins_2lidar_2src_2self_test_8cpp_source.html b/doc/html/plugins_2lidar_2src_2self_test_8cpp_source.html index be10b35ec..f9eca4470 100644 --- a/doc/html/plugins_2lidar_2src_2self_test_8cpp_source.html +++ b/doc/html/plugins_2lidar_2src_2self_test_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp
    @@ -98,6 +110,7 @@
    18using namespace std;
    19using namespace helios;
    20
    +
    21int LiDARcloud::selfTest() {
    22
    23 std::cout << "Running LiDAR self-test..." << std::endl;;
    @@ -337,7 +350,7 @@
    257 LAD = synthetic_4.getCellLeafArea(i);
    258 if( LAD==LAD && total_area.at(i)>0 && total_area.at(i)==total_area.at(i) ){
    259 RMSE_LAD += pow( LAD - total_area.at(i), 2)/float(Ncells);
    -
    260 bias_LAD += (LAD - total_area.at(i))/float(Ncells);
    +
    260 bias_LAD += (LAD - total_area.at(i))/float(Ncells);
    261 }
    262 float Gtheta_bar = synthetic_4.getCellGtheta(i);
    263 if( Gtheta_bar==Gtheta_bar && Gtheta.at(i)>0 && Gtheta.at(i)==Gtheta.at(i) ){
    @@ -369,46 +382,48 @@
    289 }
    290
    291}
    +
    -
    LiDARcloud
    Primary class for terrestrial LiDAR scan.
    Definition: LiDAR.h:270
    -
    LiDARcloud::calculateSyntheticLeafArea
    std::vector< float > calculateSyntheticLeafArea(helios::Context *context)
    Calculate the surface area of all primitives in the context.
    Definition: LiDAR.cu:3712
    -
    LiDARcloud::getGridCellCount
    uint getGridCellCount() const
    Get the number of cells in the grid.
    Definition: LiDAR.cpp:1791
    -
    LiDARcloud::getCellLeafAreaDensity
    float getCellLeafAreaDensity(uint index) const
    Get the leaf area density of a grid cell in 1/m.
    Definition: LiDAR.cpp:1938
    -
    LiDARcloud::getCellGtheta
    float getCellGtheta(uint index) const
    Get the G(theta) of a grid cell.
    Definition: LiDAR.cpp:1959
    -
    LiDARcloud::addTrianglesToContext
    void addTrianglesToContext(helios::Context *context) const
    Add triangle geometry to Helios context.
    Definition: LiDAR.cpp:1772
    -
    LiDARcloud::getCellSize
    helios::vec3 getCellSize(uint index) const
    Get the size of a grid cell by its index.
    Definition: LiDAR.cpp:1829
    -
    LiDARcloud::loadXML
    void loadXML(const char *filename)
    Read an XML file containing scan information.
    Definition: fileIO.cpp:22
    -
    LiDARcloud::calculateSyntheticGtheta
    std::vector< float > calculateSyntheticGtheta(helios::Context *context)
    Calculate the G(theta) of all primitives in the context.
    Definition: LiDAR.cpp:1849
    -
    LiDARcloud::getScanOrigin
    helios::vec3 getScanOrigin(uint scanID) const
    Get the (x,y,z) scan origin.
    Definition: LiDAR.cpp:258
    -
    LiDARcloud::selfTest
    int selfTest()
    Self-test (unit test) function.
    Definition: selfTest.cpp:21
    -
    LiDARcloud::getScanCount
    uint getScanCount()
    Get number of scans in point cloud.
    Definition: LiDAR.cpp:135
    -
    LiDARcloud::syntheticScan
    void syntheticScan(helios::Context *context)
    Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
    Definition: LiDAR.cu:3093
    -
    LiDARcloud::triangulateHitPoints
    void triangulateHitPoints(float Lmax, float max_aspect_ratio)
    Perform triangulation on all hit points in point cloud.
    Definition: LiDAR.cpp:1382
    -
    LiDARcloud::getCellLeafArea
    float getCellLeafArea(uint index) const
    Get the leaf area of a grid cell in m^2.
    Definition: LiDAR.cpp:1928
    -
    LiDARcloud::disableMessages
    void disableMessages()
    Disable all print messages to the screen except for fatal error messages.
    Definition: LiDAR.cpp:100
    -
    LiDARcloud::calculateLeafAreaGPU
    void calculateLeafAreaGPU()
    Calculate the leaf area for each grid volume.
    Definition: LiDAR.cu:897
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::loadXML
    std::vector< uint > loadXML(const char *filename, bool quiet=false)
    Load inputs specified in an XML file.
    Definition: Context_fileIO.cpp:1217
    -
    helios::Context::getPrimitiveArea
    float getPrimitiveArea(uint UUID) const
    Method to return the surface area of a Primitive.
    Definition: Context.cpp:7053
    -
    helios::Context::getPrimitiveData
    void getPrimitiveData(uint UUID, const char *label, int &data) const
    Get data associated with a primitive element.
    Definition: Context_data.cpp:1001
    -
    helios::Context::doesPrimitiveDataExist
    bool doesPrimitiveDataExist(uint UUID, const char *label) const
    Check if primitive data 'label' exists.
    Definition: Context_data.cpp:1169
    -
    helios::Context::loadOBJ
    std::vector< uint > loadOBJ(const char *filename, bool silent=false)
    Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
    Definition: Context_fileIO.cpp:3742
    -
    helios::Context::getAllUUIDs
    std::vector< uint > getAllUUIDs() const
    Get all primitive UUIDs currently in the Context.
    Definition: Context.cpp:1763
    -
    helios::Context::getPrimitiveNormal
    helios::vec3 getPrimitiveNormal(uint UUID) const
    Method to return the normal vector of a Primitive.
    Definition: Context.cpp:7104
    -
    helios::Context::getPrimitiveVertices
    std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
    Method to return the (x,y,z) coordinates of the vertices of a Primitive.
    Definition: Context.cpp:7122
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::Context::getPrimitiveCount
    uint getPrimitiveCount() const
    Get the total number of Primitives in the Context.
    Definition: Context.cpp:1759
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:511
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    +
    LiDARcloud
    Primary class for terrestrial LiDAR scan.
    Definition LiDAR.h:270
    +
    LiDARcloud::calculateSyntheticLeafArea
    std::vector< float > calculateSyntheticLeafArea(helios::Context *context)
    Calculate the surface area of all primitives in the context.
    Definition LiDAR.cu:3712
    +
    LiDARcloud::getGridCellCount
    uint getGridCellCount() const
    Get the number of cells in the grid.
    Definition LiDAR.cpp:1791
    +
    LiDARcloud::getCellLeafAreaDensity
    float getCellLeafAreaDensity(uint index) const
    Get the leaf area density of a grid cell in 1/m.
    Definition LiDAR.cpp:1938
    +
    LiDARcloud::getCellGtheta
    float getCellGtheta(uint index) const
    Get the G(theta) of a grid cell.
    Definition LiDAR.cpp:1959
    +
    LiDARcloud::addTrianglesToContext
    void addTrianglesToContext(helios::Context *context) const
    Add triangle geometry to Helios context.
    Definition LiDAR.cpp:1772
    +
    LiDARcloud::getCellSize
    helios::vec3 getCellSize(uint index) const
    Get the size of a grid cell by its index.
    Definition LiDAR.cpp:1829
    +
    LiDARcloud::loadXML
    void loadXML(const char *filename)
    Read an XML file containing scan information.
    Definition fileIO.cpp:22
    +
    LiDARcloud::calculateSyntheticGtheta
    std::vector< float > calculateSyntheticGtheta(helios::Context *context)
    Calculate the G(theta) of all primitives in the context.
    Definition LiDAR.cpp:1849
    +
    LiDARcloud::getScanOrigin
    helios::vec3 getScanOrigin(uint scanID) const
    Get the (x,y,z) scan origin.
    Definition LiDAR.cpp:258
    +
    LiDARcloud::selfTest
    int selfTest()
    Self-test (unit test) function.
    Definition selfTest.cpp:21
    +
    LiDARcloud::getScanCount
    uint getScanCount()
    Get number of scans in point cloud.
    Definition LiDAR.cpp:135
    +
    LiDARcloud::syntheticScan
    void syntheticScan(helios::Context *context)
    Run a discrete return synthetic LiDAR scan based on scan parameters given in an XML file (returns onl...
    Definition LiDAR.cu:3093
    +
    LiDARcloud::triangulateHitPoints
    void triangulateHitPoints(float Lmax, float max_aspect_ratio)
    Perform triangulation on all hit points in point cloud.
    Definition LiDAR.cpp:1382
    +
    LiDARcloud::getCellLeafArea
    float getCellLeafArea(uint index) const
    Get the leaf area of a grid cell in m^2.
    Definition LiDAR.cpp:1928
    +
    LiDARcloud::disableMessages
    void disableMessages()
    Disable all print messages to the screen except for fatal error messages.
    Definition LiDAR.cpp:100
    +
    LiDARcloud::calculateLeafAreaGPU
    void calculateLeafAreaGPU()
    Calculate the leaf area for each grid volume.
    Definition LiDAR.cu:897
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::loadXML
    std::vector< uint > loadXML(const char *filename, bool quiet=false)
    Load inputs specified in an XML file.
    Definition Context_fileIO.cpp:1217
    +
    helios::Context::getPrimitiveArea
    float getPrimitiveArea(uint UUID) const
    Method to return the surface area of a Primitive.
    Definition Context.cpp:7053
    +
    helios::Context::getPrimitiveData
    void getPrimitiveData(uint UUID, const char *label, int &data) const
    Get data associated with a primitive element.
    Definition Context_data.cpp:1001
    +
    helios::Context::doesPrimitiveDataExist
    bool doesPrimitiveDataExist(uint UUID, const char *label) const
    Check if primitive data 'label' exists.
    Definition Context_data.cpp:1169
    +
    helios::Context::loadOBJ
    std::vector< uint > loadOBJ(const char *filename, bool silent=false)
    Load geometry contained in a Wavefront OBJ file (.obj). Model will be placed at the origin without an...
    Definition Context_fileIO.cpp:3742
    +
    helios::Context::getAllUUIDs
    std::vector< uint > getAllUUIDs() const
    Get all primitive UUIDs currently in the Context.
    Definition Context.cpp:1763
    +
    helios::Context::getPrimitiveNormal
    helios::vec3 getPrimitiveNormal(uint UUID) const
    Method to return the normal vector of a Primitive.
    Definition Context.cpp:7104
    +
    helios::Context::getPrimitiveVertices
    std::vector< helios::vec3 > getPrimitiveVertices(uint UUID) const
    Method to return the (x,y,z) coordinates of the vertices of a Primitive.
    Definition Context.cpp:7122
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::Context::getPrimitiveCount
    uint getPrimitiveCount() const
    Get the total number of Primitives in the Context.
    Definition Context.cpp:1759
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
    +
    helios::vec3::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:511
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp.html b/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp.html index 8c9c8c41b..aaea9e34f 100644 --- a/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp.html +++ b/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp File Reference
    @@ -105,7 +117,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp_source.html b/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp_source.html index 5fb20b359..fc2ee0c67 100644 --- a/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp_source.html +++ b/doc/html/plugins_2plantarchitecture_2src_2self_test_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp
    @@ -98,6 +110,7 @@
    18using namespace std;
    19using namespace helios;
    20
    +
    21int PlantArchitecture::selfTest() {
    22
    23 int error_count = 0;
    @@ -120,37 +133,33 @@
    40
    41 std::cout << "Running self-test to build all plants in the library..." << std::endl;
    42
    -
    43 Timer timer;
    -
    44 for ( auto &plant_label : plant_labels ) {
    -
    45 timer.tic();
    -
    46 test_buildPlantFromLibrary( plant_label );
    -
    47 timer.toc();
    -
    48 }
    -
    49
    -
    50 if ( error_count==0 ) {
    -
    51 std::cout << "passed." << std::endl;
    -
    52 return 0;
    -
    53 } else {
    -
    54 std::cout << "failed " << error_count << " tests." << std::endl;
    -
    55 return 1;
    -
    56 }
    -
    57
    -
    58 return 0;
    -
    59}
    +
    43 for ( auto &plant_label : plant_labels ) {
    +
    44 test_buildPlantFromLibrary( plant_label );
    +
    45 }
    +
    46
    +
    47 if ( error_count==0 ) {
    +
    48 std::cout << "passed." << std::endl;
    +
    49 return 0;
    +
    50 } else {
    +
    51 std::cout << "failed " << error_count << " tests." << std::endl;
    +
    52 return 1;
    +
    53 }
    +
    54
    +
    55 return 0;
    +
    56}
    +
    - -
    PlantArchitecture::selfTest
    static int selfTest()
    Unit test routines.
    Definition: selfTest.cpp:21
    -
    PlantArchitecture::buildPlantInstanceFromLibrary
    uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
    Build a plant instance based on the model currently loaded from the library.
    Definition: PlantLibrary.cpp:27
    -
    PlantArchitecture::loadPlantModelFromLibrary
    void loadPlantModelFromLibrary(const std::string &plant_label)
    Load an existing plant model from the library.
    Definition: PlantLibrary.cpp:20
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::Timer
    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration.
    Definition: global.h:619
    -
    helios::Timer::tic
    void tic()
    Start timer.
    Definition: global.h:627
    -
    helios::Timer::toc
    double toc() const
    Stop timer and print elapsed time.
    Definition: global.h:633
    + +
    PlantArchitecture::selfTest
    static int selfTest()
    Unit test routines.
    Definition selfTest.cpp:21
    +
    PlantArchitecture::buildPlantInstanceFromLibrary
    uint buildPlantInstanceFromLibrary(const helios::vec3 &base_position, float age)
    Build a plant instance based on the model currently loaded from the library.
    Definition PlantLibrary.cpp:27
    +
    PlantArchitecture::loadPlantModelFromLibrary
    void loadPlantModelFromLibrary(const std::string &plant_label)
    Load an existing plant model from the library.
    Definition PlantLibrary.cpp:20
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plugins_2radiation_2src_2self_test_8cpp.html b/doc/html/plugins_2radiation_2src_2self_test_8cpp.html index b675a9a72..8af750e92 100644 --- a/doc/html/plugins_2radiation_2src_2self_test_8cpp.html +++ b/doc/html/plugins_2radiation_2src_2self_test_8cpp.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp File Reference
    @@ -105,7 +117,8 @@
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plugins_2radiation_2src_2self_test_8cpp_source.html b/doc/html/plugins_2radiation_2src_2self_test_8cpp_source.html index 6139dcc9d..705f5aec0 100644 --- a/doc/html/plugins_2radiation_2src_2self_test_8cpp_source.html +++ b/doc/html/plugins_2radiation_2src_2self_test_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp
    @@ -97,6 +109,7 @@
    17
    18using namespace helios;
    19
    +
    20int RadiationModel::selfTest(){
    21
    22 std::cout << "Running radiation model self-test..." << std::endl;
    @@ -1839,85 +1852,87 @@
    1759
    1760
    1761}
    +
    1762
    -
    helios::HELIOS_TYPE_VEC2
    @ HELIOS_TYPE_VEC2
    helios::vec2 data type
    Definition: Context.h:51
    -
    helios::HELIOS_TYPE_FLOAT
    @ HELIOS_TYPE_FLOAT
    floating point data type
    Definition: Context.h:47
    +
    helios::HELIOS_TYPE_VEC2
    @ HELIOS_TYPE_VEC2
    helios::vec2 data type
    Definition Context.h:51
    +
    helios::HELIOS_TYPE_FLOAT
    @ HELIOS_TYPE_FLOAT
    floating point data type
    Definition Context.h:47
    -
    RadiationModel
    Radiation transport model plugin.
    Definition: RadiationModel.h:263
    -
    RadiationModel::disableMessages
    void disableMessages()
    Disable/silence status messages.
    Definition: RadiationModel.cpp:65
    -
    RadiationModel::setCameraSpectralResponse
    void setCameraSpectralResponse(const std::string &camera_label, const std::string &band_label, const std::string &global_data)
    Set the spectral response of a camera band based on reference to global data. This function version u...
    Definition: RadiationModel.cpp:1210
    -
    RadiationModel::setSourceFlux
    void setSourceFlux(uint source_ID, const std::string &band_label, float flux)
    Set the flux of radiation source for this band.
    Definition: RadiationModel.cpp:519
    -
    RadiationModel::addSphereRadiationSource
    uint addSphereRadiationSource(const helios::vec3 &position, float radius)
    Add an external source of radiation that emits from the surface of a sphere.
    Definition: RadiationModel.cpp:343
    -
    RadiationModel::enforcePeriodicBoundary
    void enforcePeriodicBoundary(const std::string &boundary)
    Use a periodic boundary condition in one or more lateral directions.
    Definition: RadiationModel.cpp:1150
    -
    RadiationModel::setDirectRayCount
    void setDirectRayCount(const std::string &label, size_t N)
    Sets variable directRayCount, the number of rays to be used in direct radiation model.
    Definition: RadiationModel.cpp:83
    -
    RadiationModel::selfTest
    int selfTest()
    Self-test.
    Definition: selfTest.cpp:20
    -
    RadiationModel::setScatteringDepth
    void setScatteringDepth(const std::string &label, uint depth)
    Set the number of scattering iterations for a certain band.
    Definition: RadiationModel.cpp:1132
    -
    RadiationModel::disableEmission
    void disableEmission(const std::string &label)
    Disable emission calculations for all primitives in this band.
    Definition: RadiationModel.cpp:279
    -
    RadiationModel::setSourceSpectrum
    void setSourceSpectrum(uint source_ID, const std::vector< helios::vec2 > &spectrum)
    Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pai...
    Definition: RadiationModel.cpp:567
    -
    RadiationModel::runBand
    void runBand(const std::string &label)
    Run the simulation for a single radiative band.
    Definition: RadiationModel.cpp:3117
    -
    RadiationModel::addSunSphereRadiationSource
    uint addSunSphereRadiationSource()
    Add a sphere radiation source that models the sun assuming the default direction of (0,...
    Definition: RadiationModel.cpp:373
    -
    RadiationModel::addDiskRadiationSource
    uint addDiskRadiationSource(const helios::vec3 &position, float radius, const helios::vec3 &rotation)
    Add planar circular radiation source.
    Definition: RadiationModel.cpp:441
    -
    RadiationModel::setDiffuseRadiationFlux
    void setDiffuseRadiationFlux(const std::string &label, float flux)
    Diffuse (ambient) radiation flux.
    Definition: RadiationModel.cpp:97
    -
    RadiationModel::setDiffuseRayCount
    void setDiffuseRayCount(const std::string &label, size_t N)
    Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
    Definition: RadiationModel.cpp:90
    -
    RadiationModel::addRectangleRadiationSource
    uint addRectangleRadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
    Add planar rectangular radiation source.
    Definition: RadiationModel.cpp:411
    -
    RadiationModel::setDiffuseRadiationExtinctionCoeff
    void setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const helios::vec3 &peak_dir)
    Extinction coefficient of diffuse ambient radiation.
    Definition: RadiationModel.cpp:108
    -
    RadiationModel::updateGeometry
    void updateGeometry()
    Adds all geometric primitives from the Context to OptiX.
    Definition: RadiationModel.cpp:1985
    -
    RadiationModel::addRadiationBand
    void addRadiationBand(const std::string &label)
    Add a spectral radiation band to the model.
    Definition: RadiationModel.cpp:194
    -
    RadiationModel::addCollimatedRadiationSource
    uint addCollimatedRadiationSource()
    Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)...
    Definition: RadiationModel.cpp:299
    -
    RadiationModel::addRadiationCamera
    void addRadiationCamera(const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
    Add a radiation camera sensor.
    Definition: RadiationModel.cpp:1173
    -
    helios::CompoundObject::rotate
    void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
    Method to rotate a Compound Object about the x-, y-, or z-axis.
    Definition: Context.cpp:2377
    -
    helios::CompoundObject::translate
    void translate(const helios::vec3 &shift)
    Method to translate/shift a Compound Object.
    Definition: Context.cpp:2353
    -
    helios::CompoundObject::getPrimitiveUUIDs
    std::vector< uint > getPrimitiveUUIDs() const
    Get the UUIDs for all primitives contained in the object.
    Definition: Context.cpp:2256
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::copyObject
    uint copyObject(uint ObjID)
    Make a copy of a Compound Objects from the context.
    Definition: Context.cpp:2642
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::getPrimitiveArea
    float getPrimitiveArea(uint UUID) const
    Method to return the surface area of a Primitive.
    Definition: Context.cpp:7053
    -
    helios::Context::getPrimitiveData
    void getPrimitiveData(uint UUID, const char *label, int &data) const
    Get data associated with a primitive element.
    Definition: Context_data.cpp:1001
    -
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition: Context.cpp:1536
    -
    helios::Context::getObjectPointer
    CompoundObject * getObjectPointer(uint ObjID) const
    Get a pointer to a Compound Object.
    Definition: Context.cpp:2574
    -
    helios::Context::getPatchCenter
    helios::vec3 getPatchCenter(uint UUID) const
    Get the Cartesian (x,y,z) center position of a patch element.
    Definition: Context.cpp:1693
    -
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition: Context.cpp:1178
    -
    helios::Context::getGlobalData
    void getGlobalData(const char *label, int &data) const
    Get global data value (scalar integer)
    Definition: Context_data.cpp:4128
    -
    helios::Context::setGlobalData
    void setGlobalData(const char *label, const int &data)
    Add global data value (int)
    Definition: Context_data.cpp:3844
    -
    helios::Context::deleteObject
    void deleteObject(uint ObjID)
    Delete a single Compound Object from the context.
    Definition: Context.cpp:2609
    -
    helios::Context::setPrimitiveData
    void setPrimitiveData(const uint &UUID, const char *label, const int &data)
    Add data value (int) associated with a primitive element.
    Definition: Context_data.cpp:655
    -
    helios::Context::doesPrimitiveExist
    bool doesPrimitiveExist(uint UUID) const
    Check if primitive exists for a given UUID.
    Definition: Context.cpp:1659
    -
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition: global.cpp:57
    -
    helios::Context::addBox
    std::vector< uint > addBox(const vec3 &center, const vec3 &size, const int3 &subdiv)
    Add a rectangular prism tessellated with Patch primitives.
    Definition: Context.cpp:6147
    -
    helios::Context::addBoxObject
    uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
    Add a rectangular prism tessellated with Patch primitives.
    Definition: Context.cpp:5000
    -
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition: Context.cpp:5809
    -
    helios::Context::addTileObject
    uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition: Context.cpp:4550
    -
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition: global.cpp:576
    -
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition: global.cpp:617
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition: Context.cpp:1328
    -
    helios::Context::addPatch
    uint addPatch()
    Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
    Definition: Context.cpp:1212
    -
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition: helios_vector_types.h:99
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition: helios_vector_types.h:198
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    CameraCalibration
    Camera calibration structure used for camera calibration tasks.
    Definition: CameraCalibration.h:21
    -
    CameraCalibration::readROMCCanopy
    std::vector< uint > readROMCCanopy()
    Read ROMC canopy file (Used for self test).
    Definition: CameraCalibration.cpp:639
    -
    CameraProperties
    Properties defining a radiation camera.
    Definition: RadiationModel.h:31
    -
    CameraProperties::camera_resolution
    helios::int2 camera_resolution
    Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (....
    Definition: RadiationModel.h:38
    -
    CameraProperties::focal_plane_distance
    float focal_plane_distance
    Distance from the viewing plane to the focal plane.
    Definition: RadiationModel.h:41
    -
    CameraProperties::HFOV
    float HFOV
    Camera horizontal field of view in degrees.
    Definition: RadiationModel.h:47
    -
    CameraProperties::lens_diameter
    float lens_diameter
    Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
    Definition: RadiationModel.h:44
    -
    CameraProperties::FOV_aspect_ratio
    float FOV_aspect_ratio
    Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (....
    Definition: RadiationModel.h:50
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec2::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:350
    -
    helios::vec2::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:352
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    +
    RadiationModel
    Radiation transport model plugin.
    Definition RadiationModel.h:263
    +
    RadiationModel::disableMessages
    void disableMessages()
    Disable/silence status messages.
    Definition RadiationModel.cpp:65
    +
    RadiationModel::setCameraSpectralResponse
    void setCameraSpectralResponse(const std::string &camera_label, const std::string &band_label, const std::string &global_data)
    Set the spectral response of a camera band based on reference to global data. This function version u...
    Definition RadiationModel.cpp:1210
    +
    RadiationModel::setSourceFlux
    void setSourceFlux(uint source_ID, const std::string &band_label, float flux)
    Set the flux of radiation source for this band.
    Definition RadiationModel.cpp:519
    +
    RadiationModel::addSphereRadiationSource
    uint addSphereRadiationSource(const helios::vec3 &position, float radius)
    Add an external source of radiation that emits from the surface of a sphere.
    Definition RadiationModel.cpp:343
    +
    RadiationModel::enforcePeriodicBoundary
    void enforcePeriodicBoundary(const std::string &boundary)
    Use a periodic boundary condition in one or more lateral directions.
    Definition RadiationModel.cpp:1150
    +
    RadiationModel::setDirectRayCount
    void setDirectRayCount(const std::string &label, size_t N)
    Sets variable directRayCount, the number of rays to be used in direct radiation model.
    Definition RadiationModel.cpp:83
    +
    RadiationModel::selfTest
    int selfTest()
    Self-test.
    Definition selfTest.cpp:20
    +
    RadiationModel::setScatteringDepth
    void setScatteringDepth(const std::string &label, uint depth)
    Set the number of scattering iterations for a certain band.
    Definition RadiationModel.cpp:1132
    +
    RadiationModel::disableEmission
    void disableEmission(const std::string &label)
    Disable emission calculations for all primitives in this band.
    Definition RadiationModel.cpp:279
    +
    RadiationModel::setSourceSpectrum
    void setSourceSpectrum(uint source_ID, const std::vector< helios::vec2 > &spectrum)
    Set the spectral distribution of a radiation source according to a vector of wavelength-intensity pai...
    Definition RadiationModel.cpp:567
    +
    RadiationModel::runBand
    void runBand(const std::string &label)
    Run the simulation for a single radiative band.
    Definition RadiationModel.cpp:3117
    +
    RadiationModel::addSunSphereRadiationSource
    uint addSunSphereRadiationSource()
    Add a sphere radiation source that models the sun assuming the default direction of (0,...
    Definition RadiationModel.cpp:373
    +
    RadiationModel::addDiskRadiationSource
    uint addDiskRadiationSource(const helios::vec3 &position, float radius, const helios::vec3 &rotation)
    Add planar circular radiation source.
    Definition RadiationModel.cpp:441
    +
    RadiationModel::setDiffuseRadiationFlux
    void setDiffuseRadiationFlux(const std::string &label, float flux)
    Diffuse (ambient) radiation flux.
    Definition RadiationModel.cpp:97
    +
    RadiationModel::setDiffuseRayCount
    void setDiffuseRayCount(const std::string &label, size_t N)
    Sets variable diffuseRayCount, the number of rays to be used in diffuse (ambient) radiation model.
    Definition RadiationModel.cpp:90
    +
    RadiationModel::addRectangleRadiationSource
    uint addRectangleRadiationSource(const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
    Add planar rectangular radiation source.
    Definition RadiationModel.cpp:411
    +
    RadiationModel::setDiffuseRadiationExtinctionCoeff
    void setDiffuseRadiationExtinctionCoeff(const std::string &label, float K, const helios::vec3 &peak_dir)
    Extinction coefficient of diffuse ambient radiation.
    Definition RadiationModel.cpp:108
    +
    RadiationModel::updateGeometry
    void updateGeometry()
    Adds all geometric primitives from the Context to OptiX.
    Definition RadiationModel.cpp:1985
    +
    RadiationModel::addRadiationBand
    void addRadiationBand(const std::string &label)
    Add a spectral radiation band to the model.
    Definition RadiationModel.cpp:194
    +
    RadiationModel::addCollimatedRadiationSource
    uint addCollimatedRadiationSource()
    Add an external source of collimated radiation (i.e., source at infinite distance with parallel rays)...
    Definition RadiationModel.cpp:299
    +
    RadiationModel::addRadiationCamera
    void addRadiationCamera(const std::string &camera_label, const std::vector< std::string > &band_label, const helios::vec3 &position, const helios::vec3 &lookat, const CameraProperties &camera_properties, uint antialiasing_samples)
    Add a radiation camera sensor.
    Definition RadiationModel.cpp:1173
    +
    helios::CompoundObject::rotate
    void rotate(float rotation_radians, const char *rotation_axis_xyz_string)
    Method to rotate a Compound Object about the x-, y-, or z-axis.
    Definition Context.cpp:2377
    +
    helios::CompoundObject::translate
    void translate(const helios::vec3 &shift)
    Method to translate/shift a Compound Object.
    Definition Context.cpp:2353
    +
    helios::CompoundObject::getPrimitiveUUIDs
    std::vector< uint > getPrimitiveUUIDs() const
    Get the UUIDs for all primitives contained in the object.
    Definition Context.cpp:2256
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::copyObject
    uint copyObject(uint ObjID)
    Make a copy of a Compound Objects from the context.
    Definition Context.cpp:2642
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::getPrimitiveArea
    float getPrimitiveArea(uint UUID) const
    Method to return the surface area of a Primitive.
    Definition Context.cpp:7053
    +
    helios::Context::getPrimitiveData
    void getPrimitiveData(uint UUID, const char *label, int &data) const
    Get data associated with a primitive element.
    Definition Context_data.cpp:1001
    +
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition Context.cpp:1536
    +
    helios::Context::getObjectPointer
    CompoundObject * getObjectPointer(uint ObjID) const
    Get a pointer to a Compound Object.
    Definition Context.cpp:2574
    +
    helios::Context::getPatchCenter
    helios::vec3 getPatchCenter(uint UUID) const
    Get the Cartesian (x,y,z) center position of a patch element.
    Definition Context.cpp:1693
    +
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition Context.cpp:1178
    +
    helios::Context::getGlobalData
    void getGlobalData(const char *label, int &data) const
    Get global data value (scalar integer)
    Definition Context_data.cpp:4128
    +
    helios::Context::setGlobalData
    void setGlobalData(const char *label, const int &data)
    Add global data value (int)
    Definition Context_data.cpp:3844
    +
    helios::Context::deleteObject
    void deleteObject(uint ObjID)
    Delete a single Compound Object from the context.
    Definition Context.cpp:2609
    +
    helios::Context::setPrimitiveData
    void setPrimitiveData(const uint &UUID, const char *label, const int &data)
    Add data value (int) associated with a primitive element.
    Definition Context_data.cpp:655
    +
    helios::Context::doesPrimitiveExist
    bool doesPrimitiveExist(uint UUID) const
    Check if primitive exists for a given UUID.
    Definition Context.cpp:1659
    +
    helios::nullrotation
    SphericalCoord nullrotation
    Default null SphericalCoord that applies no rotation.
    Definition global.cpp:57
    +
    helios::Context::addBox
    std::vector< uint > addBox(const vec3 &center, const vec3 &size, const int3 &subdiv)
    Add a rectangular prism tessellated with Patch primitives.
    Definition Context.cpp:6147
    +
    helios::Context::addBoxObject
    uint addBoxObject(const vec3 &center, const vec3 &size, const int3 &subdiv)
    Add a rectangular prism tessellated with Patch primitives.
    Definition Context.cpp:5000
    +
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition Context.cpp:5809
    +
    helios::Context::addTileObject
    uint addTileObject(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition Context.cpp:4550
    +
    helios::deg2rad
    float deg2rad(float deg)
    Convert degrees to radians.
    Definition global.cpp:576
    +
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition global.cpp:617
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition Context.cpp:1328
    +
    helios::Context::addPatch
    uint addPatch()
    Add new default Patch geometric primitive, which is centered at the origin (0,0,0),...
    Definition Context.cpp:1212
    +
    helios::make_int2
    int2 make_int2(int x, int y)
    Make an int2 vector from two ints.
    Definition helios_vector_types.h:99
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_int3
    int3 make_int3(int X, int Y, int Z)
    Make an int3 vector from three ints.
    Definition helios_vector_types.h:198
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    CameraCalibration
    Camera calibration structure used for camera calibration tasks.
    Definition CameraCalibration.h:21
    +
    CameraCalibration::readROMCCanopy
    std::vector< uint > readROMCCanopy()
    Read ROMC canopy file (Used for self test).
    Definition CameraCalibration.cpp:639
    +
    CameraProperties
    Properties defining a radiation camera.
    Definition RadiationModel.h:31
    +
    CameraProperties::camera_resolution
    helios::int2 camera_resolution
    Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (....
    Definition RadiationModel.h:38
    +
    CameraProperties::focal_plane_distance
    float focal_plane_distance
    Distance from the viewing plane to the focal plane.
    Definition RadiationModel.h:41
    +
    CameraProperties::HFOV
    float HFOV
    Camera horizontal field of view in degrees.
    Definition RadiationModel.h:47
    +
    CameraProperties::lens_diameter
    float lens_diameter
    Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
    Definition RadiationModel.h:44
    +
    CameraProperties::FOV_aspect_ratio
    float FOV_aspect_ratio
    Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (....
    Definition RadiationModel.h:50
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec2::x
    float x
    First element in vector.
    Definition helios_vector_types.h:350
    +
    helios::vec2::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:352
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plugins_2solarposition_2src_2self_test_8cpp_source.html b/doc/html/plugins_2solarposition_2src_2self_test_8cpp_source.html index 1e815248e..4db693b6b 100644 --- a/doc/html/plugins_2solarposition_2src_2self_test_8cpp_source.html +++ b/doc/html/plugins_2solarposition_2src_2self_test_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    selfTest.cpp
    @@ -96,6 +108,7 @@
    2
    3using namespace helios;
    4
    +
    5int SolarPosition::selfTest() const{
    6
    7 std::cout << "Running solar position model self-test..." << std::flush;
    @@ -265,29 +278,31 @@
    171
    172
    173}
    +
    - -
    SolarPosition::getSunAzimuth
    float getSunAzimuth() const
    Get the current sun azimuthal angle in radians for the current location. The sun angle is computed ba...
    Definition: SolarPosition.cpp:152
    -
    SolarPosition::getSunriseTime
    helios::Time getSunriseTime() const
    Get the approximate time of sunrise at the current location.
    Definition: SolarPosition.cpp:99
    -
    SolarPosition::getSunElevation
    float getSunElevation() const
    Get the current sun elevation angle in radians for the current location. The sun angle is computed ba...
    Definition: SolarPosition.cpp:132
    -
    SolarPosition::getAmbientLongwaveFlux
    float getAmbientLongwaveFlux(float temperature_K, float humidity_rel) const
    Calculate the ambient (sky) longwave radiation flux.
    Definition: SolarPosition.cpp:366
    -
    SolarPosition::enableCloudCalibration
    void enableCloudCalibration(const std::string &timeseries_shortwave_flux_label_Wm2)
    Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against ...
    Definition: SolarPosition.cpp:436
    -
    SolarPosition::selfTest
    int selfTest() const
    Function to perform a self-test of model functions.
    Definition: selfTest.cpp:5
    -
    SolarPosition::calibrateTurbidityFromTimeseries
    float calibrateTurbidityFromTimeseries(const std::string &timeseries_shortwave_flux_label_Wm2) const
    Calculate the turbidity value based on a timeseries of net radiation measurements.
    Definition: SolarPosition.cpp:394
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::setDate
    void setDate(int day, int month, int year)
    Set simulation date by day, month, year.
    Definition: Context.cpp:1059
    -
    helios::Context::getTime
    helios::Time getTime() const
    Get the simulation time.
    Definition: Context.cpp:1166
    -
    helios::Context::getDate
    helios::Date getDate() const
    Get simulation date.
    Definition: Context.cpp:1099
    -
    helios::Context::setTime
    void setTime(int minute, int hour)
    Set simulation time.
    Definition: Context.cpp:1136
    -
    helios::Context::addTimeseriesData
    void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
    Add a data point to timeseries of data.
    Definition: Context.cpp:1823
    -
    helios::make_Time
    Time make_Time(int hour, int minute)
    Make a Time vector.
    Definition: helios_vector_types.h:1427
    -
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition: helios_vector_types.h:1241
    - - + +
    SolarPosition::getSunAzimuth
    float getSunAzimuth() const
    Get the current sun azimuthal angle in radians for the current location. The sun angle is computed ba...
    Definition SolarPosition.cpp:152
    +
    SolarPosition::getSunriseTime
    helios::Time getSunriseTime() const
    Get the approximate time of sunrise at the current location.
    Definition SolarPosition.cpp:99
    +
    SolarPosition::getSunElevation
    float getSunElevation() const
    Get the current sun elevation angle in radians for the current location. The sun angle is computed ba...
    Definition SolarPosition.cpp:132
    +
    SolarPosition::getAmbientLongwaveFlux
    float getAmbientLongwaveFlux(float temperature_K, float humidity_rel) const
    Calculate the ambient (sky) longwave radiation flux.
    Definition SolarPosition.cpp:366
    +
    SolarPosition::enableCloudCalibration
    void enableCloudCalibration(const std::string &timeseries_shortwave_flux_label_Wm2)
    Enable calibration of solar flux and diffuse fraction when possibility of clouds are present against ...
    Definition SolarPosition.cpp:436
    +
    SolarPosition::selfTest
    int selfTest() const
    Function to perform a self-test of model functions.
    Definition selfTest.cpp:5
    +
    SolarPosition::calibrateTurbidityFromTimeseries
    float calibrateTurbidityFromTimeseries(const std::string &timeseries_shortwave_flux_label_Wm2) const
    Calculate the turbidity value based on a timeseries of net radiation measurements.
    Definition SolarPosition.cpp:394
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::setDate
    void setDate(int day, int month, int year)
    Set simulation date by day, month, year.
    Definition Context.cpp:1059
    +
    helios::Context::getTime
    helios::Time getTime() const
    Get the simulation time.
    Definition Context.cpp:1166
    +
    helios::Context::getDate
    helios::Date getDate() const
    Get simulation date.
    Definition Context.cpp:1099
    +
    helios::Context::setTime
    void setTime(int minute, int hour)
    Set simulation time.
    Definition Context.cpp:1136
    +
    helios::Context::addTimeseriesData
    void addTimeseriesData(const char *label, float value, const Date &date, const Time &time)
    Add a data point to timeseries of data.
    Definition Context.cpp:1823
    +
    helios::make_Time
    Time make_Time(int hour, int minute)
    Make a Time vector.
    Definition helios_vector_types.h:1427
    +
    helios::make_Date
    Date make_Date(int day, int month, int year)
    Make a Date vector.
    Definition helios_vector_types.h:1241
    + +
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/plus.svg b/doc/html/plus.svg new file mode 100644 index 000000000..075201655 --- /dev/null +++ b/doc/html/plus.svg @@ -0,0 +1,9 @@ + + + + + + + + + diff --git a/doc/html/plusd.svg b/doc/html/plusd.svg new file mode 100644 index 000000000..0c65bfe94 --- /dev/null +++ b/doc/html/plusd.svg @@ -0,0 +1,9 @@ + + + + + + + + + diff --git a/doc/html/primitive_intersection_8cu.html b/doc/html/primitive_intersection_8cu.html index 083c603d7..536317397 100644 --- a/doc/html/primitive_intersection_8cu.html +++ b/doc/html/primitive_intersection_8cu.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    Functions | @@ -105,82 +117,82 @@ - - - - - + - + - + - + - + - + - + - + - + - + - + - +

    Functions

    +
     rtDeclareVariable (uint2, launch_index, rtLaunchIndex,)
     
    +
     rtDeclareVariable (Ray, ray, rtCurrentRay,)
     
    +
     rtDeclareVariable (PerRayData, prd, rtPayload,)
     
    +
     rtDeclareVariable (unsigned int, UUID, attribute UUID,)
     
    RT_PROGRAM void rectangle_intersect (int objID)
    RT_PROGRAM void rectangle_intersect (int objID)
     
    RT_PROGRAM void rectangle_bounds (int objID, float result[6])
    RT_PROGRAM void rectangle_bounds (int objID, float result[6])
     
    RT_PROGRAM void triangle_intersect (int objID)
    RT_PROGRAM void triangle_intersect (int objID)
     
    RT_PROGRAM void triangle_bounds (int objID, float result[6])
    RT_PROGRAM void triangle_bounds (int objID, float result[6])
     
    RT_PROGRAM void disk_intersect (int objID)
    RT_PROGRAM void disk_intersect (int objID)
     
    RT_PROGRAM void disk_bounds (int objID, float result[6])
    RT_PROGRAM void disk_bounds (int objID, float result[6])
     
    RT_PROGRAM void voxel_intersect (int objID)
    RT_PROGRAM void voxel_intersect (int objID)
     
    RT_PROGRAM void voxel_bounds (int objID, float result[6])
    RT_PROGRAM void voxel_bounds (int objID, float result[6])
     
    RT_PROGRAM void bbox_intersect (int objID)
    RT_PROGRAM void bbox_intersect (int objID)
     
    RT_PROGRAM void bbox_bounds (int objID, float result[6])
    RT_PROGRAM void bbox_bounds (int objID, float result[6])
     
    RT_PROGRAM void tile_intersect (int objID)
    RT_PROGRAM void tile_intersect (int objID)
     
    RT_PROGRAM void tile_bounds (int objID, float result[6])
    RT_PROGRAM void tile_bounds (int objID, float result[6])
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Variables

    rtBuffer< float3, 2 > patch_vertices
    rtBuffer< float3, 2 > patch_vertices
     
    rtBuffer< unsigned int, 1 > patch_UUID
    rtBuffer< unsigned int, 1 > patch_UUID
     
    rtBuffer< float3, 2 > triangle_vertices
    rtBuffer< float3, 2 > triangle_vertices
     
    rtBuffer< unsigned int, 1 > triangle_UUID
    rtBuffer< unsigned int, 1 > triangle_UUID
     
    rtBuffer< unsigned int, 1 > disk_UUID
    rtBuffer< unsigned int, 1 > disk_UUID
     
    rtBuffer< float3, 2 > tile_vertices
    rtBuffer< float3, 2 > tile_vertices
     
    rtBuffer< unsigned int, 1 > tile_UUID
    rtBuffer< unsigned int, 1 > tile_UUID
     
    rtBuffer< float3, 2 > voxel_vertices
    rtBuffer< float3, 2 > voxel_vertices
     
    rtBuffer< unsigned int, 1 > voxel_UUID
    rtBuffer< unsigned int, 1 > voxel_UUID
     
    rtBuffer< float3, 2 > bbox_vertices
    rtBuffer< float3, 2 > bbox_vertices
     
    rtBuffer< unsigned int, 1 > bbox_UUID
    rtBuffer< unsigned int, 1 > bbox_UUID
     
    rtBuffer< bool, 3 > maskdata
    rtBuffer< bool, 3 > maskdata
     
    rtBuffer< int2, 1 > masksize
    rtBuffer< int2, 1 > masksize
     
    rtBuffer< int, 1 > maskID
    rtBuffer< int, 1 > maskID
     
    rtBuffer< float2, 2 > uvdata
    rtBuffer< float2, 2 > uvdata
     
    rtBuffer< int, 1 > uvID
    rtBuffer< int, 1 > uvID
     
    rtBuffer< uint, 1 > objectID
    rtBuffer< uint, 1 > objectID
     
    rtBuffer< int2, 1 > object_subdivisions
    rtBuffer< int2, 1 > object_subdivisions
     
    rtBuffer< char, 1 > twosided_flag
    rtBuffer< char, 1 > twosided_flag
     

    Detailed Description

    @@ -200,19 +212,12 @@

    RT_PROGRAM void bbox_bounds ( - int  - objID, + int objID, - float  - result[6]  - - - - ) - + float result[6] )

    @@ -231,8 +236,7 @@

    RT_PROGRAM void bbox_intersect ( - int  - objID) + int objID) @@ -258,19 +262,12 @@

    RT_PROGRAM void disk_bounds ( - int  - objID, + int objID, - float  - result[6]  - - - - ) - + float result[6] )

    @@ -289,8 +286,7 @@

    RT_PROGRAM void disk_intersect ( - int  - objID) + int objID) @@ -316,19 +312,12 @@

    RT_PROGRAM void rectangle_bounds ( - int  - objID, + int objID, - float  - result[6]  - - - - ) - + float result[6] )

    @@ -347,8 +336,7 @@

    RT_PROGRAM void rectangle_intersect ( - int  - objID) + int objID) @@ -374,19 +362,12 @@

    RT_PROGRAM void tile_bounds ( - int  - objID, + int objID, - float  - result[6]  - - - - ) - + float result[6] )

    @@ -405,8 +386,7 @@

    RT_PROGRAM void tile_intersect ( - int  - objID) + int objID) @@ -432,19 +412,12 @@

    RT_PROGRAM void triangle_bounds ( - int  - objID, + int objID, - float  - result[6]  - - - - ) - + float result[6] )

    @@ -463,8 +436,7 @@

    RT_PROGRAM void triangle_intersect ( - int  - objID) + int objID) @@ -490,19 +462,12 @@

    RT_PROGRAM void voxel_bounds ( - int  - objID, + int objID, - float  - result[6]  - - - - ) - + float result[6] )

    @@ -521,8 +486,7 @@

    RT_PROGRAM void voxel_intersect ( - int  - objID) + int objID) @@ -847,7 +811,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/primitive_intersection_8cu_source.html b/doc/html/primitive_intersection_8cu_source.html index 80ae7cbf2..b72e5886b 100644 --- a/doc/html/primitive_intersection_8cu_source.html +++ b/doc/html/primitive_intersection_8cu_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    primitiveIntersection.cu
    @@ -148,6 +160,7 @@
    68
    69//----------------- Rectangle Primitive ----------------------//
    70
    +
    73RT_PROGRAM void rectangle_intersect(int objID )
    74{
    75
    @@ -227,7 +240,9 @@
    149 }
    150
    151}
    +
    152
    +
    155RT_PROGRAM void rectangle_bounds (int objID, float result[6])
    156{
    157 optix::Aabb* aabb = (optix::Aabb*)result;
    @@ -239,9 +254,11 @@
    163 float3 max = make_float3( fmax(fmax(v0.x,v1.x),fmax(v2.x,v3.x)), fmax(fmax(v0.y,v1.y),fmax(v2.y,v3.y)), fmax(fmax(v0.z,v1.z),fmax(v2.z,v3.z)) );
    164 aabb->set(min, max);
    165}
    +
    166
    167//----------------- Triangle Primitive ----------------------//
    168
    +
    171RT_PROGRAM void triangle_intersect(int objID )
    172{
    173
    @@ -322,8 +339,10 @@
    248
    249
    250}
    +
    251
    252
    +
    254RT_PROGRAM void triangle_bounds (int objID, float result[6])
    255{
    256 optix::Aabb* aabb = (optix::Aabb*)result;
    @@ -334,9 +353,11 @@
    261 float3 mx = make_float3( fmax(fmax(v0.x,v1.x),v2.x), fmax(fmax(v0.y,v1.y),v2.y), fmax(fmax(v0.z,v1.z),v2.z) );
    262 aabb->set(mn, mx);
    263}
    +
    264
    265//----------------- Disk Primitive ----------------------//
    266
    +
    269RT_PROGRAM void disk_intersect(int objID )
    270{
    271
    @@ -369,8 +390,10 @@
    298 }
    299
    300}
    +
    301
    302
    +
    304RT_PROGRAM void disk_bounds (int objID, float result[6])
    305{
    306 optix::Aabb* aabb = (optix::Aabb*)result;
    @@ -378,9 +401,11 @@
    308 float3 mx = make_float3( 1, 1, 0.001f );
    309 aabb->set(mn, mx);
    310}
    +
    311
    312//----------------- Voxel Primitive ----------------------//
    313
    +
    316RT_PROGRAM void voxel_intersect(int objID )
    317{
    318
    @@ -465,7 +490,9 @@
    397 }
    398
    399}
    +
    400
    +
    403RT_PROGRAM void voxel_bounds (int objID, float result[6])
    404{
    405 optix::Aabb* aabb = (optix::Aabb*)result;
    @@ -473,9 +500,11 @@
    407 float3 max = voxel_vertices[ make_uint2(1, objID) ];
    408 aabb->set(min, max);
    409}
    +
    410
    411//----------------- Bounding Box Primitive ----------------------//
    412
    +
    415RT_PROGRAM void bbox_intersect(int objID )
    416{
    417
    @@ -521,7 +550,9 @@
    457 }
    458
    459}
    +
    460
    +
    463RT_PROGRAM void bbox_bounds (int objID, float result[6])
    464{
    465 optix::Aabb* aabb = (optix::Aabb*)result;
    @@ -533,9 +564,11 @@
    471 float3 max = make_float3( fmax(fmax(v0.x,v1.x),fmax(v2.x,v3.x)), fmax(fmax(v0.y,v1.y),fmax(v2.y,v3.y)), fmax(fmax(v0.z,v1.z),fmax(v2.z,v3.z)) );
    472 aabb->set(min, max);
    473}
    +
    474
    475//----------------- Tile Object ----------------------//
    476
    +
    479RT_PROGRAM void tile_intersect(int objID )
    480{
    481
    @@ -605,7 +638,9 @@
    545 }
    546
    547}
    +
    548
    +
    551RT_PROGRAM void tile_bounds (int objID, float result[6])
    552{
    553 optix::Aabb* aabb = (optix::Aabb*)result;
    @@ -617,25 +652,27 @@
    559 float3 max = make_float3( fmax(fmax(v0.x,v1.x),fmax(v2.x,v3.x)), fmax(fmax(v0.y,v1.y),fmax(v2.y,v3.y)), fmax(fmax(v0.z,v1.z),fmax(v2.z,v3.z)) );
    560 aabb->set(min, max);
    561}
    +
    -
    d_magnitude
    __device__ float d_magnitude(const float3 v)
    Function to calculate the magnitude of float3 vector on the GPU.
    Definition: RayTracing.cu.h:329
    -
    triangle_bounds
    RT_PROGRAM void triangle_bounds(int objID, float result[6])
    Definition: primitiveIntersection.cu:254
    -
    rectangle_bounds
    RT_PROGRAM void rectangle_bounds(int objID, float result[6])
    Definition: primitiveIntersection.cu:155
    -
    triangle_intersect
    RT_PROGRAM void triangle_intersect(int objID)
    Definition: primitiveIntersection.cu:171
    -
    disk_intersect
    RT_PROGRAM void disk_intersect(int objID)
    Definition: primitiveIntersection.cu:269
    -
    bbox_bounds
    RT_PROGRAM void bbox_bounds(int objID, float result[6])
    Definition: primitiveIntersection.cu:463
    -
    bbox_intersect
    RT_PROGRAM void bbox_intersect(int objID)
    Definition: primitiveIntersection.cu:415
    -
    tile_bounds
    RT_PROGRAM void tile_bounds(int objID, float result[6])
    Definition: primitiveIntersection.cu:551
    -
    rectangle_intersect
    RT_PROGRAM void rectangle_intersect(int objID)
    Definition: primitiveIntersection.cu:73
    -
    voxel_bounds
    RT_PROGRAM void voxel_bounds(int objID, float result[6])
    Definition: primitiveIntersection.cu:403
    -
    disk_bounds
    RT_PROGRAM void disk_bounds(int objID, float result[6])
    Definition: primitiveIntersection.cu:304
    -
    voxel_intersect
    RT_PROGRAM void voxel_intersect(int objID)
    Definition: primitiveIntersection.cu:316
    -
    tile_intersect
    RT_PROGRAM void tile_intersect(int objID)
    Definition: primitiveIntersection.cu:479
    - +
    d_magnitude
    __device__ float d_magnitude(const float3 v)
    Function to calculate the magnitude of float3 vector on the GPU.
    Definition RayTracing.cu.h:329
    +
    triangle_bounds
    RT_PROGRAM void triangle_bounds(int objID, float result[6])
    Definition primitiveIntersection.cu:254
    +
    rectangle_bounds
    RT_PROGRAM void rectangle_bounds(int objID, float result[6])
    Definition primitiveIntersection.cu:155
    +
    triangle_intersect
    RT_PROGRAM void triangle_intersect(int objID)
    Definition primitiveIntersection.cu:171
    +
    disk_intersect
    RT_PROGRAM void disk_intersect(int objID)
    Definition primitiveIntersection.cu:269
    +
    bbox_bounds
    RT_PROGRAM void bbox_bounds(int objID, float result[6])
    Definition primitiveIntersection.cu:463
    +
    bbox_intersect
    RT_PROGRAM void bbox_intersect(int objID)
    Definition primitiveIntersection.cu:415
    +
    tile_bounds
    RT_PROGRAM void tile_bounds(int objID, float result[6])
    Definition primitiveIntersection.cu:551
    +
    rectangle_intersect
    RT_PROGRAM void rectangle_intersect(int objID)
    Definition primitiveIntersection.cu:73
    +
    voxel_bounds
    RT_PROGRAM void voxel_bounds(int objID, float result[6])
    Definition primitiveIntersection.cu:403
    +
    disk_bounds
    RT_PROGRAM void disk_bounds(int objID, float result[6])
    Definition primitiveIntersection.cu:304
    +
    voxel_intersect
    RT_PROGRAM void voxel_intersect(int objID)
    Definition primitiveIntersection.cu:316
    +
    tile_intersect
    RT_PROGRAM void tile_intersect(int objID)
    Definition primitiveIntersection.cu:479
    +
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/radiation_2include_2random_8h_source.html b/doc/html/radiation_2include_2random_8h_source.html index 1bf21c210..8e2d5cca3 100644 --- a/doc/html/radiation_2include_2random_8h_source.html +++ b/doc/html/radiation_2include_2random_8h_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    random.h
    @@ -206,11 +218,12 @@
    112{
    113 return seed ^ frame;
    114}
    -
    helios::sum
    float sum(const std::vector< float > &vect)
    Sum of a vector of floats.
    Definition: global.cpp:1069
    +
    helios::sum
    float sum(const std::vector< float > &vect)
    Sum of a vector of floats.
    Definition global.cpp:1069
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/radiation__beers_law.html b/doc/html/radiation__beers_law.html index 78633e636..38af27112 100644 --- a/doc/html/radiation__beers_law.html +++ b/doc/html/radiation__beers_law.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    -
    Tutorial 11: Light interception and fraction of sunlit/shaded leaf area for a homogeneous canopy
    +
    Tutorial 11: Light interception and fraction of sunlit/shaded leaf area for a homogeneous canopy

    In this tutorial, we will consider radiation transfer in a homogeneous, horizontally infinite canopy. This canonical canopy case will allow for comparison against theoretical values computed from Beer's law. Our goal will be to simulate the fraction of photosynthetically active radiation (PAR) absorbed by the canopy and the fraction of sunlit/shaded leaf area, and compare the 3D simulated values against Beer's law. This tutorial will integrate the Canopy Generator plug-in to create the canopy geometry, and the Voxel Intersection plug-in to slice leaves that lie on the canopy boundary.

    @@ -311,7 +323,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/radiation_basics.html b/doc/html/radiation_basics.html index 8ff07c4a2..e304bd13c 100644 --- a/doc/html/radiation_basics.html +++ b/doc/html/radiation_basics.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    -
    Tutorial 10: Radiation model basics - tree light interception
    +
    Tutorial 10: Radiation model basics - tree light interception

    This tutorial will illustrate how to simulate and calculate photosynthetically active radiation (PAR) interception of a tree canopy using the radiation model plug-in.

    @@ -187,7 +199,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/ray_generation_8cu.html b/doc/html/ray_generation_8cu.html index cefec6f13..be7604838 100644 --- a/doc/html/ray_generation_8cu.html +++ b/doc/html/ray_generation_8cu.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Functions | @@ -102,102 +114,102 @@ - - - - - - - - - - - - - - - - - + - + - + - +

    Functions

    +
     rtDeclareVariable (rtObject, top_object,,)
     
    +
     rtDeclareVariable (unsigned int, direct_ray_type,,)
     
    +
     rtDeclareVariable (unsigned int, diffuse_ray_type,,)
     
    +
     rtDeclareVariable (unsigned int, camera_ray_type,,)
     
    +
     rtDeclareVariable (unsigned int, pixel_label_ray_type,,)
     
    +
     rtDeclareVariable (unsigned int, random_seed,,)
     
    +
     rtDeclareVariable (unsigned int, launch_offset,,)
     
    +
     rtDeclareVariable (uint3, launch_index, rtLaunchIndex,)
     
    +
     rtDeclareVariable (uint3, launch_dim, rtLaunchDim,)
     
    +
     rtDeclareVariable (unsigned int, Nsources,,)
     
    +
     rtDeclareVariable (float3, camera_position,,)
     
    +
     rtDeclareVariable (float2, camera_direction,,)
     
    +
     rtDeclareVariable (float, camera_lens_diameter,,)
     
    +
     rtDeclareVariable (float, FOV_aspect_ratio,,)
     
    +
     rtDeclareVariable (float, camera_focal_length,,)
     
    +
     rtDeclareVariable (float, camera_viewplane_length,,)
     
    RT_PROGRAM void direct_raygen ()
    RT_PROGRAM void direct_raygen ()
     
    RT_PROGRAM void diffuse_raygen ()
    RT_PROGRAM void diffuse_raygen ()
     
    RT_PROGRAM void camera_raygen ()
    RT_PROGRAM void camera_raygen ()
     
    RT_PROGRAM void pixel_label_raygen ()
    RT_PROGRAM void pixel_label_raygen ()
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Variables

    rtBuffer< bool, 3 > maskdata
    rtBuffer< bool, 3 > maskdata
     
    rtBuffer< int2, 1 > masksize
    rtBuffer< int2, 1 > masksize
     
    rtBuffer< int, 1 > maskID
    rtBuffer< int, 1 > maskID
     
    rtBuffer< float2, 2 > uvdata
    rtBuffer< float2, 2 > uvdata
     
    rtBuffer< int, 1 > uvID
    rtBuffer< int, 1 > uvID
     
    rtBuffer< float, 2 > transform_matrix
    rtBuffer< float, 2 > transform_matrix
     
    rtBuffer< unsigned int, 1 > primitive_type
    rtBuffer< unsigned int, 1 > primitive_type
     
    rtBuffer< float, 1 > primitive_area
    rtBuffer< float, 1 > primitive_area
     
    rtBuffer< char, 1 > twosided_flag
    rtBuffer< char, 1 > twosided_flag
     
    rtBuffer< float, 1 > radiation_out_top
    rtBuffer< float, 1 > radiation_out_top
     
    rtBuffer< float, 1 > radiation_out_bottom
    rtBuffer< float, 1 > radiation_out_bottom
     
    rtBuffer< uint, 1 > objectID
    rtBuffer< uint, 1 > objectID
     
    rtBuffer< int2, 1 > object_subdivisions
    rtBuffer< int2, 1 > object_subdivisions
     
    rtBuffer< uint, 1 > primitiveID
    rtBuffer< uint, 1 > primitiveID
     
    rtBuffer< float, 1 > source_fluxes
    rtBuffer< float, 1 > source_fluxes
     
    rtBuffer< float3, 1 > source_positions
    rtBuffer< float3, 1 > source_positions
     
    rtBuffer< float3, 1 > source_rotations
    rtBuffer< float3, 1 > source_rotations
     
    rtBuffer< float2, 1 > source_widths
    rtBuffer< float2, 1 > source_widths
     
    rtBuffer< unsigned int, 1 > source_types
    rtBuffer< unsigned int, 1 > source_types
     

    Detailed Description

    @@ -217,7 +229,7 @@

    RT_PROGRAM void camera_raygen ( - ) + ) @@ -236,7 +248,7 @@

    RT_PROGRAM void diffuse_raygen ( - ) + ) @@ -255,7 +267,7 @@

    RT_PROGRAM void direct_raygen ( - ) + ) @@ -274,7 +286,7 @@

    RT_PROGRAM void pixel_label_raygen ( - ) + ) @@ -592,7 +604,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/ray_generation_8cu_source.html b/doc/html/ray_generation_8cu_source.html index 50705b7c8..99255ed38 100644 --- a/doc/html/ray_generation_8cu_source.html +++ b/doc/html/ray_generation_8cu_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    rayGeneration.cu
    @@ -817,8 +829,8 @@
    737 // Map sample to pixel
    738 float half_HFOV_radians = atanf(0.5f/camera_viewplane_length);
    739 float multiplier = tanf(half_HFOV_radians/FOV_aspect_ratio) / tanf(half_HFOV_radians);
    -
    740 sp.y = (-0.5f * PPointsRatioy + (ii+Rx)/float(camera_resolution.x));
    -
    741 sp.z = (0.5f * PPointsRatiox - (jj+Ry)/float(camera_resolution.y))*multiplier;
    +
    740 sp.y = (-0.5f * PPointsRatioy + (ii+Rx)/float(camera_resolution.x));
    +
    741 sp.z = (0.5f * PPointsRatiox - (jj+Ry)/float(camera_resolution.y))*multiplier;
    742 sp.x = camera_viewplane_length;
    743
    744 // *** Determine point 'p' on focal plane that passes through the lens center (0,0) and pixel sample (view direction coordinate aligned) *** //
    @@ -881,8 +893,8 @@
    801 // Map sample to center of pixel
    802 float half_HFOV_radians = atanf(0.5f/camera_viewplane_length);
    803 float multiplier = tanf(half_HFOV_radians/FOV_aspect_ratio) / tanf(half_HFOV_radians);
    -
    804 sp.y = (-0.5f + (ii+0.5f)/float(camera_resolution.x));
    -
    805 sp.z = (0.5f - (jj+0.5f)/float(camera_resolution.y))*multiplier;
    +
    804 sp.y = (-0.5f + (ii+0.5f)/float(camera_resolution.x));
    +
    805 sp.z = (0.5f - (jj+0.5f)/float(camera_resolution.y))*multiplier;
    806 sp.x = camera_viewplane_length;
    807
    808
    @@ -922,24 +934,25 @@
    842
    843}
    -
    d_transformPoint
    __device__ void d_transformPoint(const float(&transform_matrix)[16], float3 &v)
    Function to transform a 3D point based on current affine transformation matrix on the GPU.
    Definition: RayTracing.cu.h:316
    -
    d_magnitude
    __device__ float d_magnitude(const float3 v)
    Function to calculate the magnitude of float3 vector on the GPU.
    Definition: RayTracing.cu.h:329
    -
    d_rotatePoint
    __device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
    Definition: RayTracing.cu.h:106
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::asin_safe
    float asin_safe(float x)
    arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:247
    -
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition: helios_vector_types.h:599
    - -
    PerRayData::source_ID
    unsigned char source_ID
    Numerical identifier for radiation source corresponding to each ray.
    Definition: RayTracing.cu.h:44
    -
    PerRayData::strength
    double strength
    "strength" or amount of energy associated with the ray.
    Definition: RayTracing.cu.h:29
    -
    PerRayData::area
    float area
    Area of primitive (note for voxels, this is area density)
    Definition: RayTracing.cu.h:35
    -
    PerRayData::origin_UUID
    uint origin_UUID
    UUID of primitive from which ray originated.
    Definition: RayTracing.cu.h:31
    -
    PerRayData::seed
    uint seed
    Seed for curand random number generator.
    Definition: RayTracing.cu.h:37
    -
    PerRayData::periodic_depth
    unsigned char periodic_depth
    Number of periodic boundary intersections for ray.
    Definition: RayTracing.cu.h:39
    -
    PerRayData::face
    bool face
    Face of primitive from which ray was launched (true=top, false=bottom)
    Definition: RayTracing.cu.h:33
    +
    d_transformPoint
    __device__ void d_transformPoint(const float(&transform_matrix)[16], float3 &v)
    Function to transform a 3D point based on current affine transformation matrix on the GPU.
    Definition RayTracing.cu.h:316
    +
    d_magnitude
    __device__ float d_magnitude(const float3 v)
    Function to calculate the magnitude of float3 vector on the GPU.
    Definition RayTracing.cu.h:329
    +
    d_rotatePoint
    __device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
    Definition RayTracing.cu.h:106
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::asin_safe
    float asin_safe(float x)
    arcsine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:247
    +
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition helios_vector_types.h:599
    + +
    PerRayData::source_ID
    unsigned char source_ID
    Numerical identifier for radiation source corresponding to each ray.
    Definition RayTracing.cu.h:44
    +
    PerRayData::strength
    double strength
    "strength" or amount of energy associated with the ray.
    Definition RayTracing.cu.h:29
    +
    PerRayData::area
    float area
    Area of primitive (note for voxels, this is area density)
    Definition RayTracing.cu.h:35
    +
    PerRayData::origin_UUID
    uint origin_UUID
    UUID of primitive from which ray originated.
    Definition RayTracing.cu.h:31
    +
    PerRayData::seed
    uint seed
    Seed for curand random number generator.
    Definition RayTracing.cu.h:37
    +
    PerRayData::periodic_depth
    unsigned char periodic_depth
    Number of periodic boundary intersections for ray.
    Definition RayTracing.cu.h:39
    +
    PerRayData::face
    bool face
    Face of primitive from which ray was launched (true=top, false=bottom)
    Definition RayTracing.cu.h:33
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/ray_hit_8cu.html b/doc/html/ray_hit_8cu.html index ea736cc3c..8a88e95a1 100644 --- a/doc/html/ray_hit_8cu.html +++ b/doc/html/ray_hit_8cu.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Functions | @@ -103,119 +115,119 @@ - - - - - - - - - - - - - - + - + - + - + - + - + - + - +

    Functions

    +
     rtDeclareVariable (optix::Ray, ray, rtCurrentRay,)
     
    +
     rtDeclareVariable (float, t_hit, rtIntersectionDistance,)
     
    +
     rtDeclareVariable (PerRayData, prd, rtPayload,)
     
    +
     rtDeclareVariable (uint3, launch_dim, rtLaunchDim,)
     
    +
     rtDeclareVariable (rtObject, top_object,,)
     
    +
     rtDeclareVariable (unsigned int, UUID, attribute UUID,)
     
    +
     rtDeclareVariable (unsigned int, Nbands,,)
     
    +
     rtDeclareVariable (unsigned int, Nprimitives,,)
     
    +
     rtDeclareVariable (float2, periodic_flag,,)
     
    +
     rtDeclareVariable (unsigned int, camera_ID,,)
     
    +
     rtDeclareVariable (unsigned int, Ncameras,,)
     
    +
     rtDeclareVariable (unsigned int, Nsources,,)
     
    +
     rtDeclareVariable (float2, camera_direction,,)
     
    RT_PROGRAM void closest_hit_direct ()
    RT_PROGRAM void closest_hit_direct ()
     
    RT_PROGRAM void closest_hit_diffuse ()
    RT_PROGRAM void closest_hit_diffuse ()
     
    RT_PROGRAM void closest_hit_camera ()
    RT_PROGRAM void closest_hit_camera ()
     
    RT_PROGRAM void closest_hit_pixel_label ()
    RT_PROGRAM void closest_hit_pixel_label ()
     
    RT_PROGRAM void miss_direct ()
    RT_PROGRAM void miss_direct ()
     
    RT_PROGRAM void miss_diffuse ()
    RT_PROGRAM void miss_diffuse ()
     
    RT_PROGRAM void miss_camera ()
    RT_PROGRAM void miss_camera ()
     
    RT_PROGRAM void miss_pixel_label ()
    RT_PROGRAM void miss_pixel_label ()
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Variables

    rtBuffer< bool, 1 > band_launch_flag
    rtBuffer< bool, 1 > band_launch_flag
     
    rtBuffer< float, 1 > diffuse_flux
    rtBuffer< float, 1 > diffuse_flux
     
    rtBuffer< float, 1 > diffuse_extinction
    rtBuffer< float, 1 > diffuse_extinction
     
    rtBuffer< float3, 1 > diffuse_peak_dir
    rtBuffer< float3, 1 > diffuse_peak_dir
     
    rtBuffer< float, 1 > diffuse_dist_norm
    rtBuffer< float, 1 > diffuse_dist_norm
     
    rtBuffer< float, 1 > rho
    rtBuffer< float, 1 > rho
     
    rtBuffer< float, 1 > tau
    rtBuffer< float, 1 > tau
     
    rtBuffer< float, 1 > rho_cam
    rtBuffer< float, 1 > rho_cam
     
    rtBuffer< float, 1 > tau_cam
    rtBuffer< float, 1 > tau_cam
     
    rtBuffer< unsigned int, 1 > primitive_type
    rtBuffer< unsigned int, 1 > primitive_type
     
    rtBuffer< float, 1 > radiation_in
    rtBuffer< float, 1 > radiation_in
     
    rtBuffer< float, 1 > radiation_in_camera
    rtBuffer< float, 1 > radiation_in_camera
     
    rtBuffer< float, 1 > radiation_out_top
    rtBuffer< float, 1 > radiation_out_top
     
    rtBuffer< float, 1 > radiation_out_bottom
    rtBuffer< float, 1 > radiation_out_bottom
     
    rtBuffer< float, 1 > scatter_buff_top
    rtBuffer< float, 1 > scatter_buff_top
     
    rtBuffer< float, 1 > scatter_buff_bottom
    rtBuffer< float, 1 > scatter_buff_bottom
     
    rtBuffer< float, 1 > scatter_buff_top_cam
    rtBuffer< float, 1 > scatter_buff_top_cam
     
    rtBuffer< float, 1 > scatter_buff_bottom_cam
    rtBuffer< float, 1 > scatter_buff_bottom_cam
     
    rtBuffer< unsigned int, 1 > camera_pixel_label
    rtBuffer< unsigned int, 1 > camera_pixel_label
     
    rtBuffer< float, 1 > camera_pixel_depth
    rtBuffer< float, 1 > camera_pixel_depth
     
    rtBuffer< float, 1 > source_fluxes
    rtBuffer< float, 1 > source_fluxes
     
    rtBuffer< float3, 1 > source_positions
    rtBuffer< float3, 1 > source_positions
     
    rtBuffer< float2, 1 > source_widths
    rtBuffer< float2, 1 > source_widths
     
    rtBuffer< unsigned int, 1 > source_types
    rtBuffer< unsigned int, 1 > source_types
     
    rtBuffer< float, 1 > Rsky
    rtBuffer< float, 1 > Rsky
     
    rtBuffer< float, 2 > transform_matrix
    rtBuffer< float, 2 > transform_matrix
     
    rtBuffer< float3, 2 > bbox_vertices
    rtBuffer< float3, 2 > bbox_vertices
     
    rtBuffer< uint, 1 > objectID
    rtBuffer< uint, 1 > objectID
     

    Detailed Description

    @@ -235,7 +247,7 @@

    RT_PROGRAM void closest_hit_camera ( - ) + ) @@ -254,7 +266,7 @@

    RT_PROGRAM void closest_hit_diffuse ( - ) + ) @@ -273,7 +285,7 @@

    RT_PROGRAM void closest_hit_direct ( - ) + ) @@ -292,7 +304,7 @@

    RT_PROGRAM void closest_hit_pixel_label ( - ) + ) @@ -311,7 +323,7 @@

    RT_PROGRAM void miss_camera ( - ) + ) @@ -330,7 +342,7 @@

    RT_PROGRAM void miss_diffuse ( - ) + ) @@ -349,7 +361,7 @@

    RT_PROGRAM void miss_direct ( - ) + ) @@ -368,7 +380,7 @@

    RT_PROGRAM void miss_pixel_label ( - ) + ) @@ -830,7 +842,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/ray_hit_8cu_source.html b/doc/html/ray_hit_8cu_source.html index ddbc16d60..bbddcf5fd 100644 --- a/doc/html/ray_hit_8cu_source.html +++ b/doc/html/ray_hit_8cu_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    rayHit.cu
    @@ -490,7 +502,7 @@
    411//
    412// strength_spec += spec * powf( abs(dot(specular_direction,ray.direction)), 1.7f) *1.f/float(launch_dim.x*launch_dim.y);
    413//
    -
    415//
    +
    415//
    416// }
    417
    418 // absorption
    @@ -718,17 +730,18 @@
    640
    641}
    -
    d_transformPoint
    __device__ void d_transformPoint(const float(&transform_matrix)[16], float3 &v)
    Function to transform a 3D point based on current affine transformation matrix on the GPU.
    Definition: RayTracing.cu.h:316
    -
    d_rotatePoint
    __device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
    Definition: RayTracing.cu.h:106
    -
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition: global.cpp:241
    -
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition: helios_vector_types.h:599
    - -
    PerRayData::strength
    double strength
    "strength" or amount of energy associated with the ray.
    Definition: RayTracing.cu.h:29
    -
    PerRayData::periodic_depth
    unsigned char periodic_depth
    Number of periodic boundary intersections for ray.
    Definition: RayTracing.cu.h:39
    +
    d_transformPoint
    __device__ void d_transformPoint(const float(&transform_matrix)[16], float3 &v)
    Function to transform a 3D point based on current affine transformation matrix on the GPU.
    Definition RayTracing.cu.h:316
    +
    d_rotatePoint
    __device__ float3 d_rotatePoint(const float3 &position, const float &theta, const float &phi)
    Definition RayTracing.cu.h:106
    +
    helios::acos_safe
    float acos_safe(float x)
    arccosine function to handle cases when round-off errors cause an argument <-1 or >1,...
    Definition global.cpp:241
    +
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition helios_vector_types.h:599
    + +
    PerRayData::strength
    double strength
    "strength" or amount of energy associated with the ray.
    Definition RayTracing.cu.h:29
    +
    PerRayData::periodic_depth
    unsigned char periodic_depth
    Number of periodic boundary intersections for ray.
    Definition RayTracing.cu.h:39
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/resize.js b/doc/html/resize.js new file mode 100644 index 000000000..178d03bcb --- /dev/null +++ b/doc/html/resize.js @@ -0,0 +1,147 @@ +/* + @licstart The following is the entire license notice for the JavaScript code in this file. + + The MIT License (MIT) + + Copyright (C) 1997-2020 by Dimitri van Heesch + + Permission is hereby granted, free of charge, to any person obtaining a copy of this software + and associated documentation files (the "Software"), to deal in the Software without restriction, + including without limitation the rights to use, copy, modify, merge, publish, distribute, + sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is + furnished to do so, subject to the following conditions: + + The above copyright notice and this permission notice shall be included in all copies or + substantial portions of the Software. + + THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING + BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND + NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, + DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, + OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. + + @licend The above is the entire license notice for the JavaScript code in this file + */ + +function initResizable(treeview) { + let sidenav,navtree,content,header,footer,barWidth=6; + const RESIZE_COOKIE_NAME = ''+'width'; + + function resizeWidth() { + const sidenavWidth = $(sidenav).outerWidth(); + content.css({marginLeft:parseInt(sidenavWidth)+"px"}); + if (typeof page_layout!=='undefined' && page_layout==1) { + footer.css({marginLeft:parseInt(sidenavWidth)+"px"}); + } + Cookie.writeSetting(RESIZE_COOKIE_NAME,sidenavWidth-barWidth); + } + + function restoreWidth(navWidth) { + content.css({marginLeft:parseInt(navWidth)+barWidth+"px"}); + if (typeof page_layout!=='undefined' && page_layout==1) { + footer.css({marginLeft:parseInt(navWidth)+barWidth+"px"}); + } + sidenav.css({width:navWidth + "px"}); + } + + function resizeHeight(treeview) { + const headerHeight = header.outerHeight(); + const windowHeight = $(window).height(); + let contentHeight; + if (treeview) + { + const footerHeight = footer.outerHeight(); + let navtreeHeight,sideNavHeight; + if (typeof page_layout==='undefined' || page_layout==0) { /* DISABLE_INDEX=NO */ + contentHeight = windowHeight - headerHeight - footerHeight; + navtreeHeight = contentHeight; + sideNavHeight = contentHeight; + } else if (page_layout==1) { /* DISABLE_INDEX=YES */ + contentHeight = windowHeight - footerHeight; + navtreeHeight = windowHeight - headerHeight; + sideNavHeight = windowHeight; + } + navtree.css({height:navtreeHeight + "px"}); + sidenav.css({height:sideNavHeight + "px"}); + } + else + { + contentHeight = windowHeight - headerHeight; + } + content.css({height:contentHeight + "px"}); + if (location.hash.slice(1)) { + (document.getElementById(location.hash.slice(1))||document.body).scrollIntoView(); + } + } + + function collapseExpand() { + let newWidth; + if (sidenav.width()>0) { + newWidth=0; + } else { + const width = Cookie.readSetting(RESIZE_COOKIE_NAME,250); + newWidth = (width>250 && width<$(window).width()) ? width : 250; + } + restoreWidth(newWidth); + const sidenavWidth = $(sidenav).outerWidth(); + Cookie.writeSetting(RESIZE_COOKIE_NAME,sidenavWidth-barWidth); + } + + header = $("#top"); + content = $("#doc-content"); + footer = $("#nav-path"); + sidenav = $("#side-nav"); + if (!treeview) { +// title = $("#titlearea"); +// titleH = $(title).height(); +// let animating = false; +// content.on("scroll", function() { +// slideOpts = { duration: 200, +// step: function() { +// contentHeight = $(window).height() - header.outerHeight(); +// content.css({ height : contentHeight + "px" }); +// }, +// done: function() { animating=false; } +// }; +// if (content.scrollTop()>titleH && title.css('display')!='none' && !animating) { +// title.slideUp(slideOpts); +// animating=true; +// } else if (content.scrollTop()<=titleH && title.css('display')=='none' && !animating) { +// title.slideDown(slideOpts); +// animating=true; +// } +// }); + } else { + navtree = $("#nav-tree"); + $(".side-nav-resizable").resizable({resize: function(e, ui) { resizeWidth(); } }); + $(sidenav).resizable({ minWidth: 0 }); + } + $(window).resize(function() { resizeHeight(treeview); }); + if (treeview) + { + const device = navigator.userAgent.toLowerCase(); + const touch_device = device.match(/(iphone|ipod|ipad|android)/); + if (touch_device) { /* wider split bar for touch only devices */ + $(sidenav).css({ paddingRight:'20px' }); + $('.ui-resizable-e').css({ width:'20px' }); + $('#nav-sync').css({ right:'34px' }); + barWidth=20; + } + const width = Cookie.readSetting(RESIZE_COOKIE_NAME,250); + if (width) { restoreWidth(width); } else { resizeWidth(); } + } + resizeHeight(treeview); + const url = location.href; + const i=url.indexOf("#"); + if (i>=0) window.location.hash=url.substr(i); + const _preventDefault = function(evt) { evt.preventDefault(); }; + if (treeview) + { + $("#splitbar").bind("dragstart", _preventDefault).bind("selectstart", _preventDefault); + $(".ui-resizable-handle").dblclick(collapseExpand); + // workaround for firefox + $("body").css({overflow: "hidden"}); + } + $(window).on('load',function() { resizeHeight(treeview); }); +} +/* @license-end */ diff --git a/doc/html/s__hull__pro_8h_source.html b/doc/html/s__hull__pro_8h_source.html index fb4376546..75ccd762e 100644 --- a/doc/html/s__hull__pro_8h_source.html +++ b/doc/html/s__hull__pro_8h_source.html @@ -38,30 +38,41 @@ Logo -
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     v1.3.26
    - + + + + +
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    @@ -124,6 +136,7 @@
    30 */
    31
    32
    +
    33struct Triad
    34{
    35 int a,b, c;
    @@ -152,6 +165,7 @@
    58 return *this;
    59 };
    60};
    +
    61
    62
    63
    @@ -162,6 +176,7 @@
    68*/
    69
    70
    +
    71struct Shx
    72{
    73 int id, trid;
    @@ -185,6 +200,7 @@
    91 };
    92
    93};
    +
    94
    95
    96// sort into descending order (for use in corner responce ranking).
    @@ -200,6 +216,7 @@
    106};
    107
    108
    +
    109struct Dupex
    110{
    111 int id;
    @@ -218,6 +235,7 @@
    124 return *this;
    125 };
    126};
    +
    127
    128
    129
    @@ -257,13 +275,14 @@
    163
    164
    165#endif
    - -
    Shx
    Definition: s_hull_pro.h:72
    - + + +
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
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diff --git a/doc/html/search/pages_f.js b/doc/html/search/pages_f.js index f98dc7378..3b631c953 100644 --- a/doc/html/search/pages_f.js +++ b/doc/html/search/pages_f.js @@ -1,5 +1,7 @@ var searchData= [ - ['user_2fapi_20guide_0',['User/API Guide',['../_a_p_i.html',1,'']]], - ['using_20the_20clion_20ide_20with_20helios_1',['Using the CLion IDE with Helios',['../_c_lion_i_d_e.html',1,'']]] + ['helios_0',['Using the CLion IDE with Helios',['../_c_lion_i_d_e.html',1,'']]], + ['helios_20documentation_20v1_203_2026_1',['Helios Documentation v1.3.26',['../index.html',1,'']]], + ['helios_20vector_20types_20tutorial_2',['Tutorial 1: Helios Vector Types Tutorial',['../context_vectors.html',1,'Tutorials']]], + ['homogeneous_20canopy_3',['Tutorial 11: Light interception and fraction of sunlit/shaded leaf area for a homogeneous canopy',['../radiation__beers_law.html',1,'Tutorials']]] ]; diff --git a/doc/html/search/related_0.js b/doc/html/search/related_0.js index a1f73e50e..228621233 100644 --- a/doc/html/search/related_0.js +++ b/doc/html/search/related_0.js @@ -1,4 +1,4 @@ var searchData= [ - ['operator_3c_3c_0',['operator<<',['../structhelios_1_1int2.html#aa70779f707686be8b004587a4220a153',1,'helios::int2::operator<<()'],['../structhelios_1_1int3.html#a6f576c885af0d781aadda850a2ca77af',1,'helios::int3::operator<<()'],['../structhelios_1_1int4.html#ac6b32d39d92de0b8585c64048040f0f9',1,'helios::int4::operator<<()'],['../structhelios_1_1vec2.html#a5e585083b0cf16b2e73958747390e152',1,'helios::vec2::operator<<()'],['../structhelios_1_1vec3.html#a87277dd90e0869e2e8e7ce376dfc7033',1,'helios::vec3::operator<<()'],['../structhelios_1_1vec4.html#a32f014dbb41084ece2ad85f19c540874',1,'helios::vec4::operator<<()'],['../structhelios_1_1_r_g_bcolor.html#a47b1d94ed5f6fa0c8ae897e02a06435c',1,'helios::RGBcolor::operator<<()'],['../structhelios_1_1_r_g_b_acolor.html#aaa76985ee048b321703f78175e2b87b7',1,'helios::RGBAcolor::operator<<()'],['../structhelios_1_1_date.html#a189b8537a2e0696e2f38da34e0f13eec',1,'helios::Date::operator<<()'],['../structhelios_1_1_time.html#a5d53ebf9a42b3aa2d959a3cd5023c71a',1,'helios::Time::operator<<()'],['../structhelios_1_1_location.html#a60375cac034fe50880b47569df6e8f69',1,'helios::Location::operator<<()'],['../structhelios_1_1_spherical_coord.html#ad9381fdcb8448d8834b4ce43465b5335',1,'helios::SphericalCoord::operator<<()']]] + ['operator_3c_3c_0',['operator<<',['../structhelios_1_1int2.html#aa70779f707686be8b004587a4220a153',1,'helios::int2::operator<<'],['../structhelios_1_1int3.html#a6f576c885af0d781aadda850a2ca77af',1,'helios::int3::operator<<'],['../structhelios_1_1int4.html#ac6b32d39d92de0b8585c64048040f0f9',1,'helios::int4::operator<<'],['../structhelios_1_1vec2.html#a5e585083b0cf16b2e73958747390e152',1,'helios::vec2::operator<<'],['../structhelios_1_1vec3.html#a87277dd90e0869e2e8e7ce376dfc7033',1,'helios::vec3::operator<<'],['../structhelios_1_1vec4.html#a32f014dbb41084ece2ad85f19c540874',1,'helios::vec4::operator<<'],['../structhelios_1_1_r_g_bcolor.html#a47b1d94ed5f6fa0c8ae897e02a06435c',1,'helios::RGBcolor::operator<<'],['../structhelios_1_1_r_g_b_acolor.html#aaa76985ee048b321703f78175e2b87b7',1,'helios::RGBAcolor::operator<<'],['../structhelios_1_1_date.html#a189b8537a2e0696e2f38da34e0f13eec',1,'helios::Date::operator<<'],['../structhelios_1_1_time.html#a5d53ebf9a42b3aa2d959a3cd5023c71a',1,'helios::Time::operator<<'],['../structhelios_1_1_location.html#a60375cac034fe50880b47569df6e8f69',1,'helios::Location::operator<<'],['../structhelios_1_1_spherical_coord.html#ad9381fdcb8448d8834b4ce43465b5335',1,'helios::SphericalCoord::operator<<']]] ]; diff --git a/doc/html/search/search.css b/doc/html/search/search.css index 9d7629134..d7b0f90b7 100644 --- a/doc/html/search/search.css +++ b/doc/html/search/search.css @@ -139,7 +139,7 @@ dark-mode-toggle { span.SelectionMark { margin-right: 4px; - font-family: monospace,fixed; + font-family: 'JetBrains Mono',Consolas,Monaco,'Andale Mono','Ubuntu Mono',monospace,fixed; outline-style: none; text-decoration: none; } diff --git a/doc/html/search/search.js b/doc/html/search/search.js index e103a2621..666af01e5 100644 --- a/doc/html/search/search.js +++ b/doc/html/search/search.js @@ -22,58 +22,9 @@ @licend The above is the entire license notice for the JavaScript code in this file */ -function convertToId(search) -{ - var result = ''; - for (i=0;i document.getElementById("MSearchField"); + this.DOMSearchSelect = () => document.getElementById("MSearchSelect"); + this.DOMSearchSelectWindow = () => document.getElementById("MSearchSelectWindow"); + this.DOMPopupSearchResults = () => document.getElementById("MSearchResults"); + this.DOMPopupSearchResultsWindow = () => document.getElementById("MSearchResultsWindow"); + this.DOMSearchClose = () => document.getElementById("MSearchClose"); + this.DOMSearchBox = () => document.getElementById("MSearchBox"); // ------------ Event Handlers // Called when focus is added or removed from the search field. - this.OnSearchFieldFocus = function(isActive) - { + this.OnSearchFieldFocus = function(isActive) { this.Activate(isActive); } - this.OnSearchSelectShow = function() - { - var searchSelectWindow = this.DOMSearchSelectWindow(); - var searchField = this.DOMSearchSelect(); + this.OnSearchSelectShow = function() { + const searchSelectWindow = this.DOMSearchSelectWindow(); + const searchField = this.DOMSearchSelect(); - var left = getXPos(searchField); - var top = getYPos(searchField); - top += searchField.offsetHeight; + const left = getXPos(searchField); + const top = getYPos(searchField) + searchField.offsetHeight; // show search selection popup searchSelectWindow.style.display='block'; @@ -146,55 +102,44 @@ function SearchBox(name, resultsPath, extension) searchSelectWindow.style.top = top + 'px'; // stop selection hide timer - if (this.hideTimeout) - { + if (this.hideTimeout) { clearTimeout(this.hideTimeout); this.hideTimeout=0; } return false; // to avoid "image drag" default event } - this.OnSearchSelectHide = function() - { - this.hideTimeout = setTimeout(this.name +".CloseSelectionWindow()", + this.OnSearchSelectHide = function() { + this.hideTimeout = setTimeout(this.CloseSelectionWindow.bind(this), this.closeSelectionTimeout); } // Called when the content of the search field is changed. - this.OnSearchFieldChange = function(evt) - { - if (this.keyTimeout) // kill running timer - { + this.OnSearchFieldChange = function(evt) { + if (this.keyTimeout) { // kill running timer clearTimeout(this.keyTimeout); this.keyTimeout = 0; } - var e = (evt) ? evt : window.event; // for IE - if (e.keyCode==40 || e.keyCode==13) - { - if (e.shiftKey==1) - { + const e = evt ? evt : window.event; // for IE + if (e.keyCode==40 || e.keyCode==13) { + if (e.shiftKey==1) { this.OnSearchSelectShow(); - var win=this.DOMSearchSelectWindow(); - for (i=0;i do a search - { + const searchValue = this.DOMSearchField().value.replace(/ +/g, ""); + if (searchValue!="" && this.searchActive) { // something was found -> do a search this.Search(); } } - this.OnSearchSelectKey = function(evt) - { - var e = (evt) ? evt : window.event; // for IE - if (e.keyCode==40 && this.searchIndex0) // Up - { + } else if (e.keyCode==38 && this.searchIndex>0) { // Up this.searchIndex--; this.OnSelectItem(this.searchIndex); - } - else if (e.keyCode==13 || e.keyCode==27) - { + } else if (e.keyCode==13 || e.keyCode==27) { + e.stopPropagation(); this.OnSelectItem(this.searchIndex); this.CloseSelectionWindow(); this.DOMSearchField().focus(); @@ -299,78 +239,75 @@ function SearchBox(name, resultsPath, extension) // --------- Actions // Closes the results window. - this.CloseResultsWindow = function() - { + this.CloseResultsWindow = function() { this.DOMPopupSearchResultsWindow().style.display = 'none'; this.DOMSearchClose().style.display = 'none'; this.Activate(false); } - this.CloseSelectionWindow = function() - { + this.CloseSelectionWindow = function() { this.DOMSearchSelectWindow().style.display = 'none'; } // Performs a search. - this.Search = function() - { + this.Search = function() { this.keyTimeout = 0; // strip leading whitespace - var searchValue = this.DOMSearchField().value.replace(/^ +/, ""); + const searchValue = this.DOMSearchField().value.replace(/^ +/, ""); - var code = searchValue.toLowerCase().charCodeAt(0); - var idxChar = searchValue.substr(0, 1).toLowerCase(); - if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) // surrogate pair - { + const code = searchValue.toLowerCase().charCodeAt(0); + let idxChar = searchValue.substr(0, 1).toLowerCase(); + if ( 0xD800 <= code && code <= 0xDBFF && searchValue > 1) { // surrogate pair idxChar = searchValue.substr(0, 2); } - var jsFile; - - var idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar); - if (idx!=-1) - { - var hexCode=idx.toString(16); - jsFile = this.resultsPath + indexSectionNames[this.searchIndex] + '_' + hexCode + '.js'; + let jsFile; + let idx = indexSectionsWithContent[this.searchIndex].indexOf(idxChar); + if (idx!=-1) { + const hexCode=idx.toString(16); + jsFile = this.resultsPath + indexSectionNames[this.searchIndex] + '_' + hexCode + '.js'; } - var loadJS = function(url, impl, loc){ - var scriptTag = document.createElement('script'); + const loadJS = function(url, impl, loc) { + const scriptTag = document.createElement('script'); scriptTag.src = url; scriptTag.onload = impl; scriptTag.onreadystatechange = impl; loc.appendChild(scriptTag); } - var domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow(); - var domSearchBox = this.DOMSearchBox(); - var domPopupSearchResults = this.DOMPopupSearchResults(); - var domSearchClose = this.DOMSearchClose(); - var resultsPath = this.resultsPath; + const domPopupSearchResultsWindow = this.DOMPopupSearchResultsWindow(); + const domSearchBox = this.DOMSearchBox(); + const domPopupSearchResults = this.DOMPopupSearchResults(); + const domSearchClose = this.DOMSearchClose(); + const resultsPath = this.resultsPath; - var handleResults = function() { + const handleResults = function() { document.getElementById("Loading").style.display="none"; if (typeof searchData !== 'undefined') { createResults(resultsPath); document.getElementById("NoMatches").style.display="none"; } - - searchResults.Search(searchValue); - if (domPopupSearchResultsWindow.style.display!='block') - { + if (idx!=-1) { + searchResults.Search(searchValue); + } else { // no file with search results => force empty search results + searchResults.Search('===='); + } + + if (domPopupSearchResultsWindow.style.display!='block') { domSearchClose.style.display = 'inline-block'; - var left = getXPos(domSearchBox) + 150; - var top = getYPos(domSearchBox) + 20; + let left = getXPos(domSearchBox) + 150; + let top = getYPos(domSearchBox) + 20; domPopupSearchResultsWindow.style.display = 'block'; left -= domPopupSearchResults.offsetWidth; - var maxWidth = document.body.clientWidth; - var maxHeight = document.body.clientHeight; - var width = 300; + const maxWidth = document.body.clientWidth; + const maxHeight = document.body.clientHeight; + let width = 300; if (left<10) left=10; if (width+left+8>maxWidth) width=maxWidth-left-8; - var height = 400; + let height = 400; if (height+top+8>maxHeight) height=maxHeight-top-8; domPopupSearchResultsWindow.style.top = top + 'px'; domPopupSearchResultsWindow.style.left = left + 'px'; @@ -392,17 +329,13 @@ function SearchBox(name, resultsPath, extension) // Activates or deactivates the search panel, resetting things to // their default values if necessary. - this.Activate = function(isActive) - { + this.Activate = function(isActive) { if (isActive || // open it - this.DOMPopupSearchResultsWindow().style.display == 'block' - ) - { + this.DOMPopupSearchResultsWindow().style.display == 'block' + ) { this.DOMSearchBox().className = 'MSearchBoxActive'; this.searchActive = true; - } - else if (!isActive) // directly remove the panel - { + } else if (!isActive) { // directly remove the panel this.DOMSearchBox().className = 'MSearchBoxInactive'; this.searchActive = false; this.lastSearchValue = '' @@ -415,402 +348,347 @@ function SearchBox(name, resultsPath, extension) // ----------------------------------------------------------------------- // The class that handles everything on the search results page. -function SearchResults(name) -{ - // The number of matches from the last run of . - this.lastMatchCount = 0; - this.lastKey = 0; - this.repeatOn = false; - - // Toggles the visibility of the passed element ID. - this.FindChildElement = function(id) - { - var parentElement = document.getElementById(id); - var element = parentElement.firstChild; - - while (element && element!=parentElement) - { - if (element.nodeName.toLowerCase() == 'div' && element.className == 'SRChildren') - { - return element; - } +function SearchResults() { + + function convertToId(search) { + let result = ''; + for (let i=0;i. + this.lastMatchCount = 0; + this.lastKey = 0; + this.repeatOn = false; - if (element && element!=parentElement) - { - element = element.nextSibling; - } - } + // Toggles the visibility of the passed element ID. + this.FindChildElement = function(id) { + const parentElement = document.getElementById(id); + let element = parentElement.firstChild; + + while (element && element!=parentElement) { + if (element.nodeName.toLowerCase() == 'div' && element.className == 'SRChildren') { + return element; } - } - this.Toggle = function(id) - { - var element = this.FindChildElement(id); - if (element) - { - if (element.style.display == 'block') - { - element.style.display = 'none'; + if (element.nodeName.toLowerCase() == 'div' && element.hasChildNodes()) { + element = element.firstChild; + } else if (element.nextSibling) { + element = element.nextSibling; + } else { + do { + element = element.parentNode; } - else - { - element.style.display = 'block'; + while (element && element!=parentElement && !element.nextSibling); + + if (element && element!=parentElement) { + element = element.nextSibling; } } } + } - // Searches for the passed string. If there is no parameter, - // it takes it from the URL query. - // - // Always returns true, since other documents may try to call it - // and that may or may not be possible. - this.Search = function(search) - { - if (!search) // get search word from URL - { - search = window.location.search; - search = search.substring(1); // Remove the leading '?' - search = unescape(search); - } - - search = search.replace(/^ +/, ""); // strip leading spaces - search = search.replace(/ +$/, ""); // strip trailing spaces - search = search.toLowerCase(); - search = convertToId(search); - - var resultRows = document.getElementsByTagName("div"); - var matches = 0; - - var i = 0; - while (i < resultRows.length) - { - var row = resultRows.item(i); - if (row.className == "SRResult") - { - var rowMatchName = row.id.toLowerCase(); - rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_' - - if (search.length<=rowMatchName.length && - rowMatchName.substr(0, search.length)==search) - { - row.style.display = 'block'; - matches++; - } - else - { - row.style.display = 'none'; - } - } - i++; + this.Toggle = function(id) { + const element = this.FindChildElement(id); + if (element) { + if (element.style.display == 'block') { + element.style.display = 'none'; + } else { + element.style.display = 'block'; } - document.getElementById("Searching").style.display='none'; - if (matches == 0) // no results - { - document.getElementById("NoMatches").style.display='block'; - } - else // at least one result - { - document.getElementById("NoMatches").style.display='none'; - } - this.lastMatchCount = matches; - return true; } + } - // return the first item with index index or higher that is visible - this.NavNext = function(index) - { - var focusItem; - while (1) - { - var focusName = 'Item'+index; - focusItem = document.getElementById(focusName); - if (focusItem && focusItem.parentNode.parentNode.style.display=='block') - { - break; - } - else if (!focusItem) // last element - { - break; + // Searches for the passed string. If there is no parameter, + // it takes it from the URL query. + // + // Always returns true, since other documents may try to call it + // and that may or may not be possible. + this.Search = function(search) { + if (!search) { // get search word from URL + search = window.location.search; + search = search.substring(1); // Remove the leading '?' + search = unescape(search); + } + + search = search.replace(/^ +/, ""); // strip leading spaces + search = search.replace(/ +$/, ""); // strip trailing spaces + search = search.toLowerCase(); + search = convertToId(search); + + const resultRows = document.getElementsByTagName("div"); + let matches = 0; + + let i = 0; + while (i < resultRows.length) { + const row = resultRows.item(i); + if (row.className == "SRResult") { + let rowMatchName = row.id.toLowerCase(); + rowMatchName = rowMatchName.replace(/^sr\d*_/, ''); // strip 'sr123_' + + if (search.length<=rowMatchName.length && + rowMatchName.substr(0, search.length)==search) { + row.style.display = 'block'; + matches++; + } else { + row.style.display = 'none'; } - focusItem=null; - index++; } - return focusItem; + i++; } + document.getElementById("Searching").style.display='none'; + if (matches == 0) { // no results + document.getElementById("NoMatches").style.display='block'; + } else { // at least one result + document.getElementById("NoMatches").style.display='none'; + } + this.lastMatchCount = matches; + return true; + } - this.NavPrev = function(index) - { - var focusItem; - while (1) - { - var focusName = 'Item'+index; - focusItem = document.getElementById(focusName); - if (focusItem && focusItem.parentNode.parentNode.style.display=='block') - { - break; - } - else if (!focusItem) // last element - { - break; - } - focusItem=null; - index--; + // return the first item with index index or higher that is visible + this.NavNext = function(index) { + let focusItem; + for (;;) { + const focusName = 'Item'+index; + focusItem = document.getElementById(focusName); + if (focusItem && focusItem.parentNode.parentNode.style.display=='block') { + break; + } else if (!focusItem) { // last element + break; + } + focusItem=null; + index++; + } + return focusItem; + } + + this.NavPrev = function(index) { + let focusItem; + for (;;) { + const focusName = 'Item'+index; + focusItem = document.getElementById(focusName); + if (focusItem && focusItem.parentNode.parentNode.style.display=='block') { + break; + } else if (!focusItem) { // last element + break; } - return focusItem; + focusItem=null; + index--; } + return focusItem; + } - this.ProcessKeys = function(e) - { - if (e.type == "keydown") - { - this.repeatOn = false; - this.lastKey = e.keyCode; - } - else if (e.type == "keypress") - { - if (!this.repeatOn) - { - if (this.lastKey) this.repeatOn = true; - return false; // ignore first keypress after keydown - } + this.ProcessKeys = function(e) { + if (e.type == "keydown") { + this.repeatOn = false; + this.lastKey = e.keyCode; + } else if (e.type == "keypress") { + if (!this.repeatOn) { + if (this.lastKey) this.repeatOn = true; + return false; // ignore first keypress after keydown } - else if (e.type == "keyup") - { - this.lastKey = 0; - this.repeatOn = false; - } - return this.lastKey!=0; + } else if (e.type == "keyup") { + this.lastKey = 0; + this.repeatOn = false; } + return this.lastKey!=0; + } - this.Nav = function(evt,itemIndex) - { - var e = (evt) ? evt : window.event; // for IE - if (e.keyCode==13) return true; - if (!this.ProcessKeys(e)) return false; - - if (this.lastKey==38) // Up - { - var newIndex = itemIndex-1; - var focusItem = this.NavPrev(newIndex); - if (focusItem) - { - var child = this.FindChildElement(focusItem.parentNode.parentNode.id); - if (child && child.style.display == 'block') // children visible - { - var n=0; - var tmpElem; - while (1) // search for last child - { - tmpElem = document.getElementById('Item'+newIndex+'_c'+n); - if (tmpElem) - { - focusItem = tmpElem; - } - else // found it! - { - break; - } - n++; + this.Nav = function(evt,itemIndex) { + const e = (evt) ? evt : window.event; // for IE + if (e.keyCode==13) return true; + if (!this.ProcessKeys(e)) return false; + + if (this.lastKey==38) { // Up + const newIndex = itemIndex-1; + let focusItem = this.NavPrev(newIndex); + if (focusItem) { + let child = this.FindChildElement(focusItem.parentNode.parentNode.id); + if (child && child.style.display == 'block') { // children visible + let n=0; + let tmpElem; + for (;;) { // search for last child + tmpElem = document.getElementById('Item'+newIndex+'_c'+n); + if (tmpElem) { + focusItem = tmpElem; + } else { // found it! + break; } + n++; } } - if (focusItem) - { - focusItem.focus(); - } - else // return focus to search field - { - document.getElementById("MSearchField").focus(); - } - } - else if (this.lastKey==40) // Down - { - var newIndex = itemIndex+1; - var focusItem; - var item = document.getElementById('Item'+itemIndex); - var elem = this.FindChildElement(item.parentNode.parentNode.id); - if (elem && elem.style.display == 'block') // children visible - { - focusItem = document.getElementById('Item'+itemIndex+'_c0'); - } - if (!focusItem) focusItem = this.NavNext(newIndex); - if (focusItem) focusItem.focus(); } - else if (this.lastKey==39) // Right - { - var item = document.getElementById('Item'+itemIndex); - var elem = this.FindChildElement(item.parentNode.parentNode.id); - if (elem) elem.style.display = 'block'; - } - else if (this.lastKey==37) // Left - { - var item = document.getElementById('Item'+itemIndex); - var elem = this.FindChildElement(item.parentNode.parentNode.id); - if (elem) elem.style.display = 'none'; - } - else if (this.lastKey==27) // Escape - { - searchBox.CloseResultsWindow(); + if (focusItem) { + focusItem.focus(); + } else { // return focus to search field document.getElementById("MSearchField").focus(); } - else if (this.lastKey==13) // Enter - { - return true; - } - return false; + } else if (this.lastKey==40) { // Down + const newIndex = itemIndex+1; + let focusItem; + const item = document.getElementById('Item'+itemIndex); + const elem = this.FindChildElement(item.parentNode.parentNode.id); + if (elem && elem.style.display == 'block') { // children visible + focusItem = document.getElementById('Item'+itemIndex+'_c0'); + } + if (!focusItem) focusItem = this.NavNext(newIndex); + if (focusItem) focusItem.focus(); + } else if (this.lastKey==39) { // Right + const item = document.getElementById('Item'+itemIndex); + const elem = this.FindChildElement(item.parentNode.parentNode.id); + if (elem) elem.style.display = 'block'; + } else if (this.lastKey==37) { // Left + const item = document.getElementById('Item'+itemIndex); + const elem = this.FindChildElement(item.parentNode.parentNode.id); + if (elem) elem.style.display = 'none'; + } else if (this.lastKey==27) { // Escape + e.stopPropagation(); + searchBox.CloseResultsWindow(); + document.getElementById("MSearchField").focus(); + } else if (this.lastKey==13) { // Enter + return true; } + return false; + } - this.NavChild = function(evt,itemIndex,childIndex) - { - var e = (evt) ? evt : window.event; // for IE - if (e.keyCode==13) return true; - if (!this.ProcessKeys(e)) return false; - - if (this.lastKey==38) // Up - { - if (childIndex>0) - { - var newIndex = childIndex-1; - document.getElementById('Item'+itemIndex+'_c'+newIndex).focus(); - } - else // already at first child, jump to parent - { - document.getElementById('Item'+itemIndex).focus(); - } - } - else if (this.lastKey==40) // Down - { - var newIndex = childIndex+1; - var elem = document.getElementById('Item'+itemIndex+'_c'+newIndex); - if (!elem) // last child, jump to parent next parent - { - elem = this.NavNext(itemIndex+1); - } - if (elem) - { - elem.focus(); - } - } - else if (this.lastKey==27) // Escape - { - searchBox.CloseResultsWindow(); - document.getElementById("MSearchField").focus(); - } - else if (this.lastKey==13) // Enter - { - return true; - } - return false; + this.NavChild = function(evt,itemIndex,childIndex) { + const e = (evt) ? evt : window.event; // for IE + if (e.keyCode==13) return true; + if (!this.ProcessKeys(e)) return false; + + if (this.lastKey==38) { // Up + if (childIndex>0) { + const newIndex = childIndex-1; + document.getElementById('Item'+itemIndex+'_c'+newIndex).focus(); + } else { // already at first child, jump to parent + document.getElementById('Item'+itemIndex).focus(); + } + } else if (this.lastKey==40) { // Down + const newIndex = childIndex+1; + let elem = document.getElementById('Item'+itemIndex+'_c'+newIndex); + if (!elem) { // last child, jump to parent next parent + elem = this.NavNext(itemIndex+1); + } + if (elem) { + elem.focus(); + } + } else if (this.lastKey==27) { // Escape + e.stopPropagation(); + searchBox.CloseResultsWindow(); + document.getElementById("MSearchField").focus(); + } else if (this.lastKey==13) { // Enter + return true; } + return false; + } } -function setKeyActions(elem,action) -{ - elem.setAttribute('onkeydown',action); - elem.setAttribute('onkeypress',action); - elem.setAttribute('onkeyup',action); -} +function createResults(resultsPath) { -function setClassAttr(elem,attr) -{ - elem.setAttribute('class',attr); - elem.setAttribute('className',attr); -} + function setKeyActions(elem,action) { + elem.setAttribute('onkeydown',action); + elem.setAttribute('onkeypress',action); + elem.setAttribute('onkeyup',action); + } + + function setClassAttr(elem,attr) { + elem.setAttribute('class',attr); + elem.setAttribute('className',attr); + } -function createResults(resultsPath) -{ - var results = document.getElementById("SRResults"); + const results = document.getElementById("SRResults"); results.innerHTML = ''; - for (var e=0; e { + const id = elem[0]; + const srResult = document.createElement('div'); srResult.setAttribute('id','SR_'+id); setClassAttr(srResult,'SRResult'); - var srEntry = document.createElement('div'); + const srEntry = document.createElement('div'); setClassAttr(srEntry,'SREntry'); - var srLink = document.createElement('a'); - srLink.setAttribute('id','Item'+e); - setKeyActions(srLink,'return searchResults.Nav(event,'+e+')'); + const srLink = document.createElement('a'); + srLink.setAttribute('id','Item'+index); + setKeyActions(srLink,'return searchResults.Nav(event,'+index+')'); setClassAttr(srLink,'SRSymbol'); - srLink.innerHTML = searchData[e][1][0]; + srLink.innerHTML = elem[1][0]; srEntry.appendChild(srLink); - if (searchData[e][1].length==2) // single result - { - srLink.setAttribute('href',resultsPath+searchData[e][1][1][0]); + if (elem[1].length==2) { // single result + srLink.setAttribute('href',resultsPath+elem[1][1][0]); srLink.setAttribute('onclick','searchBox.CloseResultsWindow()'); - if (searchData[e][1][1][1]) - { + if (elem[1][1][1]) { srLink.setAttribute('target','_parent'); - } - else - { + } else { srLink.setAttribute('target','_blank'); } - var srScope = document.createElement('span'); + const srScope = document.createElement('span'); setClassAttr(srScope,'SRScope'); - srScope.innerHTML = searchData[e][1][1][2]; + srScope.innerHTML = elem[1][1][2]; srEntry.appendChild(srScope); - } - else // multiple results - { + } else { // multiple results srLink.setAttribute('href','javascript:searchResults.Toggle("SR_'+id+'")'); - var srChildren = document.createElement('div'); + const srChildren = document.createElement('div'); setClassAttr(srChildren,'SRChildren'); - for (var c=0; c Logo -
     v1.3.25 +
     v1.3.26
    - + + + + +
    sorghum.cpp
    @@ -99,6 +111,7 @@
    5
    6
    7// SORGHUM PLANT
    +
    8uint CanopyGenerator::sorghum( const SorghumCanopyParameters &params, const vec3 &origin ) {
    9 // STAGE 1
    10 if (params.sorghum_stage ==1){
    @@ -534,7 +547,7 @@
    440
    441 int nodes_no = params.s3_number_of_leaves;
    442
    -
    443 float rotation_x1 = (context->randu(0, 360) * PI_F) / float(180);// inclination rotation, different for each plant
    +
    443 float rotation_x1 = (context->randu(0, 360) * PI_F) / float(180);// inclination rotation, different for each plant
    444 std::vector<std::vector<uint> > s3_UUID_leaf_plant;
    445
    446 for (int i = 1; i < (nodes_no + 1); i++) {
    @@ -653,12 +666,12 @@
    559 frac = 1;
    560 } else {
    561
    -
    562 frac = 1 - ((i - (context->randu() / float(2))) / float((nodes_no + 1)));
    +
    562 frac = 1 - ((i - (context->randu() / float(2))) / float((nodes_no + 1)));
    563 }
    564
    565 vec3 base = interpolateTube(node_stem, frac);
    -
    566 float rotation_1 = - (params.s3_mean_leaf_angle * PI_F / float(180)) - (context->randu(0, 5) * PI_F) / float(180);
    -
    567 float rotation_x2 = (context->randu(0, 45) * PI_F) / float(180);
    +
    566 float rotation_1 = - (params.s3_mean_leaf_angle * PI_F / float(180)) - (context->randu(0, 5) * PI_F) / float(180);
    +
    567 float rotation_x2 = (context->randu(0, 45) * PI_F) / float(180);
    568 float rotation_2 = rotation_x1 + rotation_x2;
    569 float rotation_3 = rotation_2 + PI_F; //
    570 vec3 translation(-params.s3_stem_radius * 2.8, -0.9 / (2 / float(params.s3_leaf_size.y)), 0); // adjustment
    @@ -814,7 +827,7 @@
    720
    721 int nodes_no = params.s4_number_of_leaves;
    722
    -
    723 float rotation_x1 = (context->randu(0, 360) * PI_F) / float(180);// inclination rotation, different for each plant
    +
    723 float rotation_x1 = (context->randu(0, 360) * PI_F) / float(180);// inclination rotation, different for each plant
    724 std::vector<std::vector<uint> > s4_UUID_leaf_plant;
    725
    726 for (int i = 1; i < (nodes_no + 1); i++) {
    @@ -933,12 +946,12 @@
    839 if (i == 1) {
    840 frac = 0.9;
    841 } else {
    -
    842 frac = (1 - ((i - (context->randu() / float(2))) / float((nodes_no + 1)*1.2))) - 0.15;
    +
    842 frac = (1 - ((i - (context->randu() / float(2))) / float((nodes_no + 1)*1.2))) - 0.15;
    843 }
    844
    845 vec3 base = interpolateTube(node_stem, frac);
    -
    846 float rotation_1 = - (params.s4_mean_leaf_angle * PI_F / float(180)) - (context->randu(0, 5) * PI_F) / float(180);
    -
    847 float rotation_x2 = (context->randu(0, 45) * PI_F) / float(180);
    +
    846 float rotation_1 = - (params.s4_mean_leaf_angle * PI_F / float(180)) - (context->randu(0, 5) * PI_F) / float(180);
    +
    847 float rotation_x2 = (context->randu(0, 45) * PI_F) / float(180);
    848 float rotation_2 = rotation_x1 + rotation_x2;
    849 float rotation_3 = rotation_2 + PI_F; //
    850 vec3 translation(-params.s4_stem_radius * 2, -0.9 / (2 / float(params.s4_leaf_size.y)), 0); // adjustment
    @@ -981,7 +994,7 @@
    887 float mid_height = params.s5_stem_length * 0.5;
    888 float nx = n * dx;
    889 float i = nx * (180 / float(params.s5_stem_length)) * PI_F / float(180);
    -
    890 float i_mid = (mid_height) * (180 / float(params.s5_stem_length)) * PI_F / float(180);
    +
    890 float i_mid = (mid_height) * (180 / float(params.s5_stem_length)) * PI_F / float(180);
    891 float x_mid = -params.s5_stem_bend * sin(i_mid);
    892 float x1, x;
    893 if (nx <= mid_height) {
    @@ -1126,7 +1139,7 @@
    1032 int nodes_no = params.s5_number_of_leaves;
    1033
    1034
    -
    1035 float rotation_x1 = (context->randu(0, 360) * PI_F) / float(180);// inclination rotation, different for each plant
    +
    1035 float rotation_x1 = (context->randu(0, 360) * PI_F) / float(180);// inclination rotation, different for each plant
    1036 std::vector<std::vector<uint> > s5_UUID_leaf_plant;
    1037
    1038 for (int i = 1; i < (nodes_no + 1); i++) {
    @@ -1229,12 +1242,12 @@
    1135 frac = 0.9;
    1136 } else {
    1137
    -
    1138 frac = (1 - ((i - (context->randu() / float(2))) / float((nodes_no + 1)*1.2))) - 0.15;
    +
    1138 frac = (1 - ((i - (context->randu() / float(2))) / float((nodes_no + 1)*1.2))) - 0.15;
    1139 }
    1140
    1141 vec3 base = interpolateTube(nodes_stem, frac);
    -
    1142 float rotation_1 = - (params.s5_mean_leaf_angle * PI_F / float(180)) - (context->randu(0, 10) * PI_F) / float(180);
    -
    1143 float rotation_x2 = (context->randu(0, 45) * PI_F) / float(180);
    +
    1142 float rotation_1 = - (params.s5_mean_leaf_angle * PI_F / float(180)) - (context->randu(0, 10) * PI_F) / float(180);
    +
    1143 float rotation_x2 = (context->randu(0, 45) * PI_F) / float(180);
    1144 float rotation_2 = rotation_x1 + rotation_x2;
    1145 float rotation_3 = rotation_2 + PI_F; //
    1146 vec3 translation(0, -0.9 / (2 / float(params.s5_leaf_size.y)), 0); // adjustment
    @@ -1254,7 +1267,7 @@
    1160
    1161 }
    1162
    -
    1163 float plant_rotation = (context->randu(0, 360) * PI_F) / float(180);
    +
    1163 float plant_rotation = (context->randu(0, 360) * PI_F) / float(180);
    1164
    1165 context->rotatePrimitive( s5_UUID_stem_plant,plant_rotation,origin, make_vec3(0,0,1));
    1166 context->rotatePrimitive( flatten(s5_UUID_panicle_plant),plant_rotation,origin, make_vec3(0,0,1));
    @@ -1272,91 +1285,93 @@
    1178 return UUID_leaf.size()-1;
    1179
    1180};
    +
    1181
    1182
    1183
    -
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition: CanopyGenerator.cpp:3251
    -
    CanopyGenerator::sorghum
    uint sorghum(const SorghumCanopyParameters &params, const helios::vec3 &origin)
    Function to add an individual sorghum plant.
    Definition: sorghum.cpp:8
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition: Context.cpp:1536
    -
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition: Context.cpp:1178
    -
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition: Context.cpp:1420
    -
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition: Context.cpp:1578
    -
    helios::Context::addDisk
    std::vector< uint > addDisk(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
    Add new Disk geometric primitive to the Context given its center, and size.
    Definition: Context.cpp:6356
    -
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition: Context.cpp:5930
    -
    helios::flatten
    std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
    Function to flatten a 2D int vector into a 1D vector.
    Definition: global.cpp:1943
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition: Context.cpp:1328
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition: helios_vector_types.h:954
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    SorghumCanopyParameters
    Parameters defining Sorghum plant canopy.
    Definition: CanopyGenerator.h:764
    -
    SorghumCanopyParameters::s5_stem_subdivisions
    int s5_stem_subdivisions
    Number of stem radial subdivisions for stage 5.
    Definition: CanopyGenerator.h:944
    -
    SorghumCanopyParameters::s1_leaf1_angle
    float s1_leaf1_angle
    Leaf1 vertical angle of rotation for stage 1.
    Definition: CanopyGenerator.h:810
    -
    SorghumCanopyParameters::s5_stem_length
    float s5_stem_length
    Length of the sorghum stem for stage 5.
    Definition: CanopyGenerator.h:935
    -
    SorghumCanopyParameters::s4_seed_texture_file
    std::string s4_seed_texture_file
    Texture map of the panicle for stage 4.
    Definition: CanopyGenerator.h:915
    -
    SorghumCanopyParameters::s5_number_of_leaves
    int s5_number_of_leaves
    Number of leaves for the sorghum plant, stage 5.
    Definition: CanopyGenerator.h:962
    -
    SorghumCanopyParameters::s5_mean_leaf_angle
    float s5_mean_leaf_angle
    Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 1...
    Definition: CanopyGenerator.h:965
    -
    SorghumCanopyParameters::s4_stem_length
    float s4_stem_length
    Length of the sorghum stem for stage 4.
    Definition: CanopyGenerator.h:900
    -
    SorghumCanopyParameters::s3_leaf_subdivisions
    helios::int2 s3_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
    Definition: CanopyGenerator.h:886
    -
    SorghumCanopyParameters::s1_leaf_texture_file
    std::string s1_leaf_texture_file
    Texture map for sorghum leaf1 for stage 1.
    Definition: CanopyGenerator.h:822
    -
    SorghumCanopyParameters::s1_leaf_size2
    helios::vec2 s1_leaf_size2
    Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
    Definition: CanopyGenerator.h:804
    -
    SorghumCanopyParameters::s4_stem_radius
    float s4_stem_radius
    Radius of the sorghum stem for stage 4.
    Definition: CanopyGenerator.h:903
    -
    SorghumCanopyParameters::s3_mean_leaf_angle
    float s3_mean_leaf_angle
    Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is ...
    Definition: CanopyGenerator.h:892
    -
    SorghumCanopyParameters::s4_stem_subdivisions
    float s4_stem_subdivisions
    Number of stem radial subdivisions for stage 4.
    Definition: CanopyGenerator.h:906
    -
    SorghumCanopyParameters::s2_leaf_texture_file
    std::string s2_leaf_texture_file
    Texture map for sorghum leaf for stage 2.
    Definition: CanopyGenerator.h:869
    -
    SorghumCanopyParameters::s5_panicle_subdivisions
    int s5_panicle_subdivisions
    Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
    Definition: CanopyGenerator.h:950
    -
    SorghumCanopyParameters::s4_mean_leaf_angle
    float s4_mean_leaf_angle
    Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5...
    Definition: CanopyGenerator.h:927
    -
    SorghumCanopyParameters::s2_leaf_subdivisions
    helios::int2 s2_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
    Definition: CanopyGenerator.h:866
    -
    SorghumCanopyParameters::s4_leaf_size
    helios::vec2 s4_leaf_size
    Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
    Definition: CanopyGenerator.h:918
    -
    SorghumCanopyParameters::s4_leaf_subdivisions
    helios::int2 s4_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
    Definition: CanopyGenerator.h:921
    -
    SorghumCanopyParameters::s2_stem_radius
    float s2_stem_radius
    Radius of the sorghum stem for stage 2.
    Definition: CanopyGenerator.h:830
    -
    SorghumCanopyParameters::s5_stem_bend
    float s5_stem_bend
    Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the i...
    Definition: CanopyGenerator.h:941
    -
    SorghumCanopyParameters::s1_leaf_size1
    helios::vec2 s1_leaf_size1
    Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
    Definition: CanopyGenerator.h:801
    -
    SorghumCanopyParameters::s5_stem_radius
    float s5_stem_radius
    Radius of the sorghum stem for stage 5.
    Definition: CanopyGenerator.h:938
    -
    SorghumCanopyParameters::s3_stem_radius
    float s3_stem_radius
    Radius of the sorghum stem for stage 3.
    Definition: CanopyGenerator.h:877
    -
    SorghumCanopyParameters::s5_leaf_texture_file
    std::string s5_leaf_texture_file
    Texture map for sorghum leaf, stage 5.
    Definition: CanopyGenerator.h:968
    -
    SorghumCanopyParameters::s5_leaf_subdivisions
    helios::int2 s5_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
    Definition: CanopyGenerator.h:959
    -
    SorghumCanopyParameters::s1_leaf_size3
    helios::vec2 s1_leaf_size3
    Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
    Definition: CanopyGenerator.h:807
    -
    SorghumCanopyParameters::s4_number_of_leaves
    int s4_number_of_leaves
    Number of leaves for the sorghum plant, stage 4.
    Definition: CanopyGenerator.h:924
    -
    SorghumCanopyParameters::s4_panicle_subdivisions
    int s4_panicle_subdivisions
    Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
    Definition: CanopyGenerator.h:912
    -
    SorghumCanopyParameters::s3_stem_length
    float s3_stem_length
    Length of the sorghum stem for stage 3.
    Definition: CanopyGenerator.h:874
    -
    SorghumCanopyParameters::s3_leaf_texture_file
    std::string s3_leaf_texture_file
    Texture map for sorghum leaf for stage 3.
    Definition: CanopyGenerator.h:895
    -
    SorghumCanopyParameters::s2_leaf_size3
    helios::vec2 s2_leaf_size3
    Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition: CanopyGenerator.h:842
    -
    SorghumCanopyParameters::s1_stem_radius
    float s1_stem_radius
    Radius of the sorghum stem for stage 1.
    Definition: CanopyGenerator.h:795
    -
    SorghumCanopyParameters::s5_panicle_size
    helios::vec2 s5_panicle_size
    Size of panicle in x- and y- directions for stage 5.
    Definition: CanopyGenerator.h:947
    -
    SorghumCanopyParameters::s3_number_of_leaves
    int s3_number_of_leaves
    Number of leaves along the stem for stage 3.
    Definition: CanopyGenerator.h:889
    -
    SorghumCanopyParameters::s2_leaf_size5
    helios::vec2 s2_leaf_size5
    Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition: CanopyGenerator.h:848
    -
    SorghumCanopyParameters::s5_leaf_size
    helios::vec2 s5_leaf_size
    Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
    Definition: CanopyGenerator.h:956
    -
    SorghumCanopyParameters::s1_stem_subdivisions
    float s1_stem_subdivisions
    Number of stem radial subdivisions for stage 1.
    Definition: CanopyGenerator.h:798
    -
    SorghumCanopyParameters::s2_leaf_size4
    helios::vec2 s2_leaf_size4
    Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition: CanopyGenerator.h:845
    -
    SorghumCanopyParameters::s1_leaf_subdivisions
    helios::int2 s1_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
    Definition: CanopyGenerator.h:819
    -
    SorghumCanopyParameters::s4_leaf_texture_file
    std::string s4_leaf_texture_file
    Texture map for sorghum leaf, stage 4.
    Definition: CanopyGenerator.h:930
    -
    SorghumCanopyParameters::s2_leaf_size2
    helios::vec2 s2_leaf_size2
    Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition: CanopyGenerator.h:839
    -
    SorghumCanopyParameters::s3_leaf_size
    helios::vec2 s3_leaf_size
    Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
    Definition: CanopyGenerator.h:883
    -
    SorghumCanopyParameters::s2_stem_length
    float s2_stem_length
    Length of the sorghum stem for stage 2.
    Definition: CanopyGenerator.h:827
    -
    SorghumCanopyParameters::s1_leaf2_angle
    float s1_leaf2_angle
    Leaf2 vertical angle of rotation for stage 1.
    Definition: CanopyGenerator.h:813
    -
    SorghumCanopyParameters::s3_stem_subdivisions
    float s3_stem_subdivisions
    Number of stem radial subdivisions for stage 3.
    Definition: CanopyGenerator.h:880
    -
    SorghumCanopyParameters::s1_stem_length
    float s1_stem_length
    Length of the sorghum stem for stage 1.
    Definition: CanopyGenerator.h:792
    -
    SorghumCanopyParameters::sorghum_stage
    int sorghum_stage
    Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation ...
    Definition: CanopyGenerator.h:787
    -
    SorghumCanopyParameters::s1_leaf3_angle
    float s1_leaf3_angle
    Leaf3 vertical angle of rotation for stage 1.
    Definition: CanopyGenerator.h:816
    -
    SorghumCanopyParameters::s2_leaf_size1
    helios::vec2 s2_leaf_size1
    Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition: CanopyGenerator.h:836
    -
    SorghumCanopyParameters::s5_seed_texture_file
    std::string s5_seed_texture_file
    Texture map of the panicle for stage 5.
    Definition: CanopyGenerator.h:953
    -
    SorghumCanopyParameters::s4_panicle_size
    helios::vec2 s4_panicle_size
    Size of panicle in x- and y- directions for stage 4.
    Definition: CanopyGenerator.h:909
    -
    helios::RGBcolor
    R-G-B color vector.
    Definition: helios_vector_types.h:844
    -
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition: helios_vector_types.h:1553
    -
    helios::int2::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:50
    -
    helios::int2::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:48
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec2::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:350
    -
    helios::vec2::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:352
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    +
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition CanopyGenerator.cpp:3251
    +
    CanopyGenerator::sorghum
    uint sorghum(const SorghumCanopyParameters &params, const helios::vec3 &origin)
    Function to add an individual sorghum plant.
    Definition sorghum.cpp:8
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition Context.cpp:1536
    +
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition Context.cpp:1178
    +
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition Context.cpp:1420
    +
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition Context.cpp:1578
    +
    helios::Context::addDisk
    std::vector< uint > addDisk(uint Ndivs, const helios::vec3 &center, const helios::vec2 &size)
    Add new Disk geometric primitive to the Context given its center, and size.
    Definition Context.cpp:6356
    +
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition Context.cpp:5930
    +
    helios::flatten
    std::vector< int > flatten(const std::vector< std::vector< int > > &vec)
    Function to flatten a 2D int vector into a 1D vector.
    Definition global.cpp:1943
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition Context.cpp:1328
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_RGBcolor
    RGBcolor make_RGBcolor(float r, float g, float b)
    Make an RGBcolor vector.
    Definition helios_vector_types.h:954
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    SorghumCanopyParameters
    Parameters defining Sorghum plant canopy.
    Definition CanopyGenerator.h:764
    +
    SorghumCanopyParameters::s5_stem_subdivisions
    int s5_stem_subdivisions
    Number of stem radial subdivisions for stage 5.
    Definition CanopyGenerator.h:944
    +
    SorghumCanopyParameters::s1_leaf1_angle
    float s1_leaf1_angle
    Leaf1 vertical angle of rotation for stage 1.
    Definition CanopyGenerator.h:810
    +
    SorghumCanopyParameters::s5_stem_length
    float s5_stem_length
    Length of the sorghum stem for stage 5.
    Definition CanopyGenerator.h:935
    +
    SorghumCanopyParameters::s4_seed_texture_file
    std::string s4_seed_texture_file
    Texture map of the panicle for stage 4.
    Definition CanopyGenerator.h:915
    +
    SorghumCanopyParameters::s5_number_of_leaves
    int s5_number_of_leaves
    Number of leaves for the sorghum plant, stage 5.
    Definition CanopyGenerator.h:962
    +
    SorghumCanopyParameters::s5_mean_leaf_angle
    float s5_mean_leaf_angle
    Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 1...
    Definition CanopyGenerator.h:965
    +
    SorghumCanopyParameters::s4_stem_length
    float s4_stem_length
    Length of the sorghum stem for stage 4.
    Definition CanopyGenerator.h:900
    +
    SorghumCanopyParameters::s3_leaf_subdivisions
    helios::int2 s3_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
    Definition CanopyGenerator.h:886
    +
    SorghumCanopyParameters::s1_leaf_texture_file
    std::string s1_leaf_texture_file
    Texture map for sorghum leaf1 for stage 1.
    Definition CanopyGenerator.h:822
    +
    SorghumCanopyParameters::s1_leaf_size2
    helios::vec2 s1_leaf_size2
    Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
    Definition CanopyGenerator.h:804
    +
    SorghumCanopyParameters::s4_stem_radius
    float s4_stem_radius
    Radius of the sorghum stem for stage 4.
    Definition CanopyGenerator.h:903
    +
    SorghumCanopyParameters::s3_mean_leaf_angle
    float s3_mean_leaf_angle
    Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is ...
    Definition CanopyGenerator.h:892
    +
    SorghumCanopyParameters::s4_stem_subdivisions
    float s4_stem_subdivisions
    Number of stem radial subdivisions for stage 4.
    Definition CanopyGenerator.h:906
    +
    SorghumCanopyParameters::s2_leaf_texture_file
    std::string s2_leaf_texture_file
    Texture map for sorghum leaf for stage 2.
    Definition CanopyGenerator.h:869
    +
    SorghumCanopyParameters::s5_panicle_subdivisions
    int s5_panicle_subdivisions
    Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
    Definition CanopyGenerator.h:950
    +
    SorghumCanopyParameters::s4_mean_leaf_angle
    float s4_mean_leaf_angle
    Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5...
    Definition CanopyGenerator.h:927
    +
    SorghumCanopyParameters::s2_leaf_subdivisions
    helios::int2 s2_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
    Definition CanopyGenerator.h:866
    +
    SorghumCanopyParameters::s4_leaf_size
    helios::vec2 s4_leaf_size
    Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
    Definition CanopyGenerator.h:918
    +
    SorghumCanopyParameters::s4_leaf_subdivisions
    helios::int2 s4_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
    Definition CanopyGenerator.h:921
    +
    SorghumCanopyParameters::s2_stem_radius
    float s2_stem_radius
    Radius of the sorghum stem for stage 2.
    Definition CanopyGenerator.h:830
    +
    SorghumCanopyParameters::s5_stem_bend
    float s5_stem_bend
    Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the i...
    Definition CanopyGenerator.h:941
    +
    SorghumCanopyParameters::s1_leaf_size1
    helios::vec2 s1_leaf_size1
    Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
    Definition CanopyGenerator.h:801
    +
    SorghumCanopyParameters::s5_stem_radius
    float s5_stem_radius
    Radius of the sorghum stem for stage 5.
    Definition CanopyGenerator.h:938
    +
    SorghumCanopyParameters::s3_stem_radius
    float s3_stem_radius
    Radius of the sorghum stem for stage 3.
    Definition CanopyGenerator.h:877
    +
    SorghumCanopyParameters::s5_leaf_texture_file
    std::string s5_leaf_texture_file
    Texture map for sorghum leaf, stage 5.
    Definition CanopyGenerator.h:968
    +
    SorghumCanopyParameters::s5_leaf_subdivisions
    helios::int2 s5_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
    Definition CanopyGenerator.h:959
    +
    SorghumCanopyParameters::s1_leaf_size3
    helios::vec2 s1_leaf_size3
    Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
    Definition CanopyGenerator.h:807
    +
    SorghumCanopyParameters::s4_number_of_leaves
    int s4_number_of_leaves
    Number of leaves for the sorghum plant, stage 4.
    Definition CanopyGenerator.h:924
    +
    SorghumCanopyParameters::s4_panicle_subdivisions
    int s4_panicle_subdivisions
    Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
    Definition CanopyGenerator.h:912
    +
    SorghumCanopyParameters::s3_stem_length
    float s3_stem_length
    Length of the sorghum stem for stage 3.
    Definition CanopyGenerator.h:874
    +
    SorghumCanopyParameters::s3_leaf_texture_file
    std::string s3_leaf_texture_file
    Texture map for sorghum leaf for stage 3.
    Definition CanopyGenerator.h:895
    +
    SorghumCanopyParameters::s2_leaf_size3
    helios::vec2 s2_leaf_size3
    Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition CanopyGenerator.h:842
    +
    SorghumCanopyParameters::s1_stem_radius
    float s1_stem_radius
    Radius of the sorghum stem for stage 1.
    Definition CanopyGenerator.h:795
    +
    SorghumCanopyParameters::s5_panicle_size
    helios::vec2 s5_panicle_size
    Size of panicle in x- and y- directions for stage 5.
    Definition CanopyGenerator.h:947
    +
    SorghumCanopyParameters::s3_number_of_leaves
    int s3_number_of_leaves
    Number of leaves along the stem for stage 3.
    Definition CanopyGenerator.h:889
    +
    SorghumCanopyParameters::s2_leaf_size5
    helios::vec2 s2_leaf_size5
    Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition CanopyGenerator.h:848
    +
    SorghumCanopyParameters::s5_leaf_size
    helios::vec2 s5_leaf_size
    Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
    Definition CanopyGenerator.h:956
    +
    SorghumCanopyParameters::s1_stem_subdivisions
    float s1_stem_subdivisions
    Number of stem radial subdivisions for stage 1.
    Definition CanopyGenerator.h:798
    +
    SorghumCanopyParameters::s2_leaf_size4
    helios::vec2 s2_leaf_size4
    Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition CanopyGenerator.h:845
    +
    SorghumCanopyParameters::s1_leaf_subdivisions
    helios::int2 s1_leaf_subdivisions
    Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
    Definition CanopyGenerator.h:819
    +
    SorghumCanopyParameters::s4_leaf_texture_file
    std::string s4_leaf_texture_file
    Texture map for sorghum leaf, stage 4.
    Definition CanopyGenerator.h:930
    +
    SorghumCanopyParameters::s2_leaf_size2
    helios::vec2 s2_leaf_size2
    Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition CanopyGenerator.h:839
    +
    SorghumCanopyParameters::s3_leaf_size
    helios::vec2 s3_leaf_size
    Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
    Definition CanopyGenerator.h:883
    +
    SorghumCanopyParameters::s2_stem_length
    float s2_stem_length
    Length of the sorghum stem for stage 2.
    Definition CanopyGenerator.h:827
    +
    SorghumCanopyParameters::s1_leaf2_angle
    float s1_leaf2_angle
    Leaf2 vertical angle of rotation for stage 1.
    Definition CanopyGenerator.h:813
    +
    SorghumCanopyParameters::s3_stem_subdivisions
    float s3_stem_subdivisions
    Number of stem radial subdivisions for stage 3.
    Definition CanopyGenerator.h:880
    +
    SorghumCanopyParameters::s1_stem_length
    float s1_stem_length
    Length of the sorghum stem for stage 1.
    Definition CanopyGenerator.h:792
    +
    SorghumCanopyParameters::sorghum_stage
    int sorghum_stage
    Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation ...
    Definition CanopyGenerator.h:787
    +
    SorghumCanopyParameters::s1_leaf3_angle
    float s1_leaf3_angle
    Leaf3 vertical angle of rotation for stage 1.
    Definition CanopyGenerator.h:816
    +
    SorghumCanopyParameters::s2_leaf_size1
    helios::vec2 s2_leaf_size1
    Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
    Definition CanopyGenerator.h:836
    +
    SorghumCanopyParameters::s5_seed_texture_file
    std::string s5_seed_texture_file
    Texture map of the panicle for stage 5.
    Definition CanopyGenerator.h:953
    +
    SorghumCanopyParameters::s4_panicle_size
    helios::vec2 s4_panicle_size
    Size of panicle in x- and y- directions for stage 4.
    Definition CanopyGenerator.h:909
    +
    helios::RGBcolor
    R-G-B color vector.
    Definition helios_vector_types.h:844
    +
    helios::SphericalCoord::zenith
    const float & zenith
    Zenithal angle (radians)
    Definition helios_vector_types.h:1553
    +
    helios::int2::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:50
    +
    helios::int2::x
    int x
    First element in vector.
    Definition helios_vector_types.h:48
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec2::x
    float x
    First element in vector.
    Definition helios_vector_types.h:350
    +
    helios::vec2::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:352
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
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    - + + + + +
    strawberry.cpp
    @@ -306,6 +318,7 @@
    212
    213}
    214
    +
    215uint CanopyGenerator::strawberry(const StrawberryParameters &params, const vec3 &origin ){
    216
    217 std::vector<std::vector<uint> > leaf_UUIDs;
    @@ -337,48 +350,50 @@
    243 return UUID_leaf.size()-1;
    244
    245}
    +
    -
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition: CanopyGenerator.cpp:3251
    -
    CanopyGenerator::strawberry
    uint strawberry(const StrawberryParameters &params, const helios::vec3 &origin)
    Function to add an individual strawberry plant.
    Definition: strawberry.cpp:215
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition: Context.cpp:1536
    -
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition: Context.cpp:1178
    -
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition: Context.cpp:1420
    -
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition: Context.cpp:1578
    -
    helios::Context::scalePrimitive
    void scalePrimitive(uint UUID, const helios::vec3 &S)
    Scale a primitive using its UUID relative to the origin (0,0,0)
    Definition: Context.cpp:1491
    -
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition: Context.cpp:5930
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition: global.cpp:617
    -
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition: Context.cpp:1328
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    StrawberryParameters
    Parameters defining the strawberry plant canopy.
    Definition: CanopyGenerator.h:626
    -
    StrawberryParameters::stem_subdivisions
    int stem_subdivisions
    Number of radial subdivisions for stem tubes.
    Definition: CanopyGenerator.h:661
    -
    StrawberryParameters::stems_per_plant
    int stems_per_plant
    Number of stems per plant.
    Definition: CanopyGenerator.h:664
    -
    StrawberryParameters::fruit_radius
    float fruit_radius
    Radius of strawberry fruit.
    Definition: CanopyGenerator.h:682
    -
    StrawberryParameters::fruit_subdivisions
    uint fruit_subdivisions
    Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
    Definition: CanopyGenerator.h:688
    -
    StrawberryParameters::plant_height
    float plant_height
    Height of the plant.
    Definition: CanopyGenerator.h:676
    -
    StrawberryParameters::leaf_subdivisions
    helios::int2 leaf_subdivisions
    Number of sub-division segments per leaf.
    Definition: CanopyGenerator.h:652
    -
    StrawberryParameters::fruit_texture_file
    std::string fruit_texture_file
    Texture map for strawberry fruit.
    Definition: CanopyGenerator.h:685
    -
    StrawberryParameters::clusters_per_stem
    float clusters_per_stem
    Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
    Definition: CanopyGenerator.h:691
    -
    StrawberryParameters::stem_radius
    float stem_radius
    Radius of stems.
    Definition: CanopyGenerator.h:667
    -
    StrawberryParameters::leaf_texture_file
    std::string leaf_texture_file
    Path to texture map file for leaves.
    Definition: CanopyGenerator.h:655
    -
    StrawberryParameters::stem_color
    helios::RGBcolor stem_color
    Color of stems.
    Definition: CanopyGenerator.h:658
    -
    StrawberryParameters::leaf_length
    float leaf_length
    Maximum width of leaves.
    Definition: CanopyGenerator.h:649
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::int2::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:50
    -
    helios::int2::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:48
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    +
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition CanopyGenerator.cpp:3251
    +
    CanopyGenerator::strawberry
    uint strawberry(const StrawberryParameters &params, const helios::vec3 &origin)
    Function to add an individual strawberry plant.
    Definition strawberry.cpp:215
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition Context.cpp:1536
    +
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition Context.cpp:1178
    +
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition Context.cpp:1420
    +
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition Context.cpp:1578
    +
    helios::Context::scalePrimitive
    void scalePrimitive(uint UUID, const helios::vec3 &S)
    Scale a primitive using its UUID relative to the origin (0,0,0)
    Definition Context.cpp:1491
    +
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition Context.cpp:5930
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition global.cpp:617
    +
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition Context.cpp:1328
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    StrawberryParameters
    Parameters defining the strawberry plant canopy.
    Definition CanopyGenerator.h:626
    +
    StrawberryParameters::stem_subdivisions
    int stem_subdivisions
    Number of radial subdivisions for stem tubes.
    Definition CanopyGenerator.h:661
    +
    StrawberryParameters::stems_per_plant
    int stems_per_plant
    Number of stems per plant.
    Definition CanopyGenerator.h:664
    +
    StrawberryParameters::fruit_radius
    float fruit_radius
    Radius of strawberry fruit.
    Definition CanopyGenerator.h:682
    +
    StrawberryParameters::fruit_subdivisions
    uint fruit_subdivisions
    Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
    Definition CanopyGenerator.h:688
    +
    StrawberryParameters::plant_height
    float plant_height
    Height of the plant.
    Definition CanopyGenerator.h:676
    +
    StrawberryParameters::leaf_subdivisions
    helios::int2 leaf_subdivisions
    Number of sub-division segments per leaf.
    Definition CanopyGenerator.h:652
    +
    StrawberryParameters::fruit_texture_file
    std::string fruit_texture_file
    Texture map for strawberry fruit.
    Definition CanopyGenerator.h:685
    +
    StrawberryParameters::clusters_per_stem
    float clusters_per_stem
    Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
    Definition CanopyGenerator.h:691
    +
    StrawberryParameters::stem_radius
    float stem_radius
    Radius of stems.
    Definition CanopyGenerator.h:667
    +
    StrawberryParameters::leaf_texture_file
    std::string leaf_texture_file
    Path to texture map file for leaves.
    Definition CanopyGenerator.h:655
    +
    StrawberryParameters::stem_color
    helios::RGBcolor stem_color
    Color of stems.
    Definition CanopyGenerator.h:658
    +
    StrawberryParameters::leaf_length
    float leaf_length
    Maximum width of leaves.
    Definition CanopyGenerator.h:649
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::int2::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:50
    +
    helios::int2::x
    int x
    First element in vector.
    Definition helios_vector_types.h:48
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    + diff --git a/doc/html/struct_aerial_hit_point.html b/doc/html/struct_aerial_hit_point.html index b4eb7f9e9..cbc1f3712 100644 --- a/doc/html/struct_aerial_hit_point.html +++ b/doc/html/struct_aerial_hit_point.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,28 +105,28 @@

    Structure containing metadata for an aerial hit point. - More...

    + More...

    #include <AerialLiDAR.h>

    - +

    Public Member Functions

     AerialHitPoint (int __scanID, helios::vec3 __position, helios::SphericalCoord __direction, helios::int2 __row_column, helios::RGBcolor __color, std::map< std::string, float > __data)
     AerialHitPoint (int __scanID, helios::vec3 __position, helios::SphericalCoord __direction, helios::int2 __row_column, helios::RGBcolor __color, std::map< std::string, float > __data)
     
    - + - + - + - + - + - +

    Data Fields

    helios::vec3 position
    helios::vec3 position
     
    helios::SphericalCoord direction
    helios::SphericalCoord direction
     
    helios::RGBcolor color
    helios::RGBcolor color
     
    std::map< std::string, float > data
    std::map< std::string, float > data
     
    helios::int3 gridcell
    helios::int3 gridcell
     
    int scanID
    int scanID
     

    Detailed Description

    @@ -134,8 +146,7 @@

    AerialHitPoint::AerialHitPoint ( - void  - ) + void ) @@ -162,43 +173,32 @@

    AerialHitPoint::AerialHitPoint ( - int  - __scanID, + int __scanID, - helios::vec3  - __position, + helios::vec3 __position, - helios::SphericalCoord  - __direction, + helios::SphericalCoord __direction, - helios::int2  - __row_column, + helios::int2 __row_column, - helios::RGBcolor  - __color, + helios::RGBcolor __color, - std::map< std::string, float >  - __data  - - - - ) - + std::map< std::string, float > __data ) @@ -315,7 +315,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_aerial_scan_metadata.html b/doc/html/struct_aerial_scan_metadata.html index 872532bde..0be530d0e 100644 --- a/doc/html/struct_aerial_scan_metadata.html +++ b/doc/html/struct_aerial_scan_metadata.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,37 +105,37 @@

    Structure containing metadata for an aerial scan. - More...

    + More...

    #include <AerialLiDAR.h>

    - +

    Public Member Functions

     AerialScanMetadata (const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence)
     AerialScanMetadata (const helios::vec3 __center, const helios::vec2 __extent, const float __coneangle, const float __scandensity, const float __exitDiameter, const float __beamDivergence)
     Create an aerial LiDAR scan data structure.
     
    - + - + - + - + - + - + - +

    Data Fields

    std::size_t Nrays
    std::size_t Nrays
     Number of laser pulses in scan.
     
    helios::vec3 center
    helios::vec3 center
     (x,y,z) position of scan surface center
     
    helios::vec2 extent
    helios::vec2 extent
     (x,y) size/extent of scan surface
     
    float coneangle
    float coneangle
     Width of scan cone in degrees.
     
    float scandensity
    float scandensity
     Scan density in points/m^2.
     
    float exitDiameter
    float exitDiameter
     Diameter of laser pulse at exit from the scanner.
     
    float beamDivergence
    float beamDivergence
     Divergence angle of the laser beam in radians.
     
    @@ -142,43 +154,32 @@

    AerialScanMetadata::AerialScanMetadata ( - const helios::vec3  - __center, + const helios::vec3 __center, - const helios::vec2  - __extent, + const helios::vec2 __extent, - const float  - __coneangle, + const float __coneangle, - const float  - __scandensity, + const float __scandensity, - const float  - __exitDiameter, + const float __exitDiameter, - const float  - __beamDivergence  - - - - ) - + const float __beamDivergence )

    @@ -333,7 +334,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_axis_rotation.html b/doc/html/struct_axis_rotation.html index d9f5aeb2a..bf4f03d02 100644 --- a/doc/html/struct_axis_rotation.html +++ b/doc/html/struct_axis_rotation.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -95,25 +107,25 @@ - + - + - +

    Public Member Functions

     AxisRotation (float a_pitch, float a_yaw, float a_roll)
     AxisRotation (float a_pitch, float a_yaw, float a_roll)
     
    AxisRotation operator+ (const AxisRotation &a) const
    AxisRotation operator+ (const AxisRotation &a) const
     
    AxisRotation operator- (const AxisRotation &a) const
    AxisRotation operator- (const AxisRotation &a) const
     
    - + - + - +

    Data Fields

    float pitch
    float pitch
     
    float yaw
    float yaw
     
    float roll
    float roll
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const AxisRotation &rot)
    std::ostream & operator<< (std::ostream &os, const AxisRotation &rot)
     

    Detailed Description

    @@ -132,7 +144,7 @@

    AxisRotation::AxisRotation ( - ) + ) @@ -159,25 +171,17 @@

    AxisRotation::AxisRotation ( - float  - a_pitch, + float a_pitch, - float  - a_yaw, + float a_yaw, - float  - a_roll  - - - - ) - + float a_roll ) @@ -204,8 +208,7 @@

    AxisRotation AxisRotation::operator+ ( - const AxisRotation &  - a) + const AxisRotation & a) const @@ -232,8 +235,7 @@

    AxisRotation AxisRotation::operator- ( - const AxisRotation &  - a) + const AxisRotation & a) const @@ -248,7 +250,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -261,19 +263,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const AxisRotation &  - rot  - - - - ) - + const AxisRotation & rot ) @@ -342,7 +337,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_b_b_lcoefficients.html b/doc/html/struct_b_b_lcoefficients.html index 1e7ecf2e0..759fa9b3b 100644 --- a/doc/html/struct_b_b_lcoefficients.html +++ b/doc/html/struct_b_b_lcoefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -92,17 +104,17 @@

    Coefficients for Ball, Berry, Leuning (Leuning 1990, 1995) stomatal conductance model. - More...

    + More...

    #include <StomatalConductanceModel.h>

    - + - + - +

    Data Fields

    float gs0
    float gs0
     
    float a1
    float a1
     
    float D0
    float D0
     

    Detailed Description

    @@ -122,7 +134,7 @@

    BBLcoefficients::BBLcoefficients ( - ) + ) @@ -192,7 +204,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_b_bcoefficients.html b/doc/html/struct_b_bcoefficients.html index 9ad60fa2b..dc2152c3c 100644 --- a/doc/html/struct_b_bcoefficients.html +++ b/doc/html/struct_b_bcoefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -92,21 +104,21 @@

    Coefficients for simplified Bailey stomatal conductance model. - More...

    + More...

    #include <StomatalConductanceModel.h>

    - + - + - + - + - +

    Data Fields

    float pi_0
    float pi_0
     
    float pi_m
    float pi_m
     
    float theta
    float theta
     
    float sigma
    float sigma
     
    float chi
    float chi
     

    Detailed Description

    @@ -126,7 +138,7 @@

    BBcoefficients::BBcoefficients ( - ) + ) @@ -228,7 +240,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_b_m_fcoefficients.html b/doc/html/struct_b_m_fcoefficients.html index ff14ba069..ed4eec88d 100644 --- a/doc/html/struct_b_m_fcoefficients.html +++ b/doc/html/struct_b_m_fcoefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -92,19 +104,19 @@

    Coefficients for simplified Buckley, Mott, & Farquhar stomatal conductance model. - More...

    + More...

    #include <StomatalConductanceModel.h>

    - + - + - + - +

    Data Fields

    float Em
    float Em
     
    float i0
    float i0
     
    float k
    float k
     
    float b
    float b
     

    Detailed Description

    @@ -124,7 +136,7 @@

    BMFcoefficients::BMFcoefficients ( - ) + ) @@ -210,7 +222,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_b_w_bcoefficients.html b/doc/html/struct_b_w_bcoefficients.html index c7e5b6726..043804d7e 100644 --- a/doc/html/struct_b_w_bcoefficients.html +++ b/doc/html/struct_b_w_bcoefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -92,15 +104,15 @@

    Coefficients for original Ball, Woodrow, Berry (1987) stomatal conductance model. - More...

    + More...

    #include <StomatalConductanceModel.h>

    - + - +

    Data Fields

    float gs0
    float gs0
     
    float a1
    float a1
     

    Detailed Description

    @@ -120,7 +132,7 @@

    BWBcoefficients::BWBcoefficients ( - ) + ) @@ -174,7 +186,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_base_canopy_parameters.html b/doc/html/struct_base_canopy_parameters.html index 38e491011..e608f2cfe 100644 --- a/doc/html/struct_base_canopy_parameters.html +++ b/doc/html/struct_base_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Base struct class for Canopy parameters. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -117,27 +129,27 @@ - + - + - + - + - +

    Public Member Functions

     BaseCanopyParameters ()
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - +

    Data Fields

    helios::vec3 canopy_origin
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -155,7 +167,7 @@

    BaseCanopyParameters::BaseCanopyParameters ( - ) + ) @@ -176,8 +188,7 @@

    BaseCanopyParameters::BaseCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -206,8 +217,7 @@

    virtual void BaseCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -220,7 +230,7 @@

    HomogeneousCanopyParameters, SphericalCrownsCanopyParameters, ConicalCrownsCanopyParameters, BaseGrapeVineParameters, VSPGrapevineParameters, SplitGrapevineParameters, UnilateralGrapevineParameters, GobletGrapevineParameters, WhiteSpruceCanopyParameters, TomatoParameters, StrawberryParameters, WalnutCanopyParameters, SorghumCanopyParameters, and BeanParameters.

    +

    Implemented in BaseGrapeVineParameters, BeanParameters, ConicalCrownsCanopyParameters, GobletGrapevineParameters, HomogeneousCanopyParameters, SorghumCanopyParameters, SphericalCrownsCanopyParameters, SplitGrapevineParameters, StrawberryParameters, TomatoParameters, UnilateralGrapevineParameters, VSPGrapevineParameters, WalnutCanopyParameters, and WhiteSpruceCanopyParameters.

    @@ -236,19 +246,12 @@

    virtual void BaseCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -260,7 +263,7 @@

    HomogeneousCanopyParameters, SphericalCrownsCanopyParameters, ConicalCrownsCanopyParameters, BaseGrapeVineParameters, VSPGrapevineParameters, SplitGrapevineParameters, UnilateralGrapevineParameters, GobletGrapevineParameters, WhiteSpruceCanopyParameters, TomatoParameters, StrawberryParameters, WalnutCanopyParameters, SorghumCanopyParameters, and BeanParameters.

    +

    Implemented in BaseGrapeVineParameters, BeanParameters, ConicalCrownsCanopyParameters, GobletGrapevineParameters, HomogeneousCanopyParameters, SorghumCanopyParameters, SphericalCrownsCanopyParameters, SplitGrapevineParameters, StrawberryParameters, TomatoParameters, UnilateralGrapevineParameters, VSPGrapevineParameters, WalnutCanopyParameters, and WhiteSpruceCanopyParameters.

    @@ -273,8 +276,7 @@

    void BaseCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -336,7 +338,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_base_canopy_parameters.png b/doc/html/struct_base_canopy_parameters.png index 7bda8ecd5c3b1a1ac71f10ef0805400b4c5ad6db..686fe937ebc7fdbc2884a223258bf21a8f5a1e39 100644 GIT binary patch delta 21 dcmeCs?9iNG$MxXBga7~ko1P6@veCmq1OR#-3n2gi delta 21 dcmeCs?9iNG$93Sqf&c&i2T!`ZVxxzH2mp7J3nc&m diff --git a/doc/html/struct_base_grape_vine_parameters.html b/doc/html/struct_base_grape_vine_parameters.html index 37f14fcdc..949fe0ff0 100644 --- a/doc/html/struct_base_grape_vine_parameters.html +++ b/doc/html/struct_base_grape_vine_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -107,171 +119,165 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     BaseGrapeVineParameters ()
     BaseGrapeVineParameters ()
     Default constructor.
     
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float leaf_width
    float leaf_width
     Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is the width at the base of the shoot.
     
    float leaf_width_spread
    float leaf_width_spread
     Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf width would be between leaf_width - leaf_width_spread and leaf_width + leaf_width_spread.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for trunks/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for trunk/cordon/shoot tubes.
     
    int wood_subdivisions_spread
    int wood_subdivisions_spread
     Spread value for the number of wood subdivisions. With any new canopy or plant generation, the maximum number of wood subdivisions would be between wood_subdivisions - wood_subdivisions_spread and wood_subdivisions + wood_subdivisions_spread.
     
    float dead_probability
    float dead_probability
     Probability for a plant to be dead, i.e. without any leaves or grapes.
     
    float missing_plant_probability
    float missing_plant_probability
     Probability for a plant to be missing.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float plant_spacing_spread
    float plant_spacing_spread
     Spread value for the plant spacing. The spacing between adjacent plants along a row would vary between plant_spacing - plant_spacing_spread and plant_spacing + plant_spacing_spread.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float row_spacing_spread
    float row_spacing_spread
     Spread value for the row spacing. This allows to vary the alignment of plants along a row. The spacing between two plants of adjacent rows would be between row_spacing - row_spacing_spread and row_spacing + row_spacing_spread.
     
    float trunk_height
    float trunk_height
     Distance between the ground and top of trunks.
     
    float trunk_height_spread
    float trunk_height_spread
     Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be between trunk_height - trunk_height_spread and trunk_height + trunk_height_spread.
     
    float trunk_radius
    float trunk_radius
     Radius of the trunk at the widest point.
     
    float trunk_radius_spread
    float trunk_radius_spread
     Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be between trunk_radius - trunk_radius_spread and trunk_radius + trunk_radius_spread.
     
    float cordon_length
    float cordon_length
     Length of the cordons. By default, half the plant spacing.
     
    float cordon_length_spread
    float cordon_length_spread
     Spread value for the cordon length. With any new canopy or plant generation, the cordon length would be between cordon_length - cordon_length_spread and cordon_length + cordon_length_spread.
     
    float cordon_height
    float cordon_height
     Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
     
    float cordon_height_spread
    float cordon_height_spread
     Spread value for the cordon height. With any new canopy or plant generation, the cordon height would be between cordon_height - cordon_height_spread and cordon_height + cordon_height_spread.
     
    float cordon_radius
    float cordon_radius
     Radius of cordon branches.
     
    float cordon_radius_spread
    float cordon_radius_spread
     Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would be between cordon_radius - cordon_radius_spread and cordon_radius + cordon_radius_spread.
     
    float shoot_length
    float shoot_length
     Length of shoots.
     
    float shoot_length_spread
    float shoot_length_spread
     Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be between shoot_length - shoot_length_spread and shoot_length + shoot_length_spread.
     
    float shoot_radius
    float shoot_radius
     Radius of shoot branches.
     
    float shoot_radius_spread
    float shoot_radius_spread
     Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be between shoot_radius - shoot_radius_spread and shoot_radius + shoot_radius_spread.
     
    uint shoots_per_cordon
    uint shoots_per_cordon
     Number of shoots on each cordon.
     
    uint shoots_per_cordon_spread
    uint shoots_per_cordon_spread
     Spread value for the number of shoots per cordon. With any new canopy or plant generation, the number of shoots per cordon would be between shoots_per_cordon - shoots_per_cordon_spread and shoots_per_cordon + shoots_per_cordon_spread.
     
    float leaf_spacing_fraction
    float leaf_spacing_fraction
     Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = 1 would give a leaf spacing equal to the leaf width.
     
    float leaf_spacing_fraction_spread
    float leaf_spacing_fraction_spread
     Spread value for the leaf spacing fraction. With any new canopy or plant generation, the leaf spacing fraction would be between leaf_spacing_fraction - leaf_spacing_fraction_spread and leaf_spacing_fraction + leaf_spacing_fraction_spread.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float grape_radius
    float grape_radius
     Radius of grape berries.
     
    float grape_radius_spread
    float grape_radius_spread
     Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be between grape_radius - grape_radius_spread and grape_radius + grape_radius_spread.
     
    float cluster_radius
    float cluster_radius
     Maximum horizontal radius of grape clusters.
     
    float cluster_radius_spread
    float cluster_radius_spread
     Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius would be between cluster_radius - cluster_radius_spread and cluster_radius + cluster_radius_spread.
     
    float cluster_height_max
    float cluster_height_max
     Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
     
    float cluster_height_max_spread
    float cluster_height_max_spread
     Spread value for the cluster height. With any new canopy or plant generation, the cluster height would be between cluster_height - cluster_height_spread and cluster_height + cluster_height_spread.
     
    helios::RGBcolor grape_color
    helios::RGBcolor grape_color
     Color of grapes.
     
    uint grape_subdivisions
    uint grape_subdivisions
     Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subdivisions)^2 triangles per grape berry)
     
    uint grape_subdivisions_spread
    uint grape_subdivisions_spread
     Spread value for the number of grape subdivisions. With any new canopy or plant generation, the number of grape subdivisions would be between grape_subdivisions - grape_subdivisions_spread and grape_subdivisions + grape_subdivisions_spread.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    float canopy_rotation_spread
    float canopy_rotation_spread
     Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotation would be between canopy_rotation - canopy_rotation_spread and canopy_rotation + canopy_rotation_spread.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -288,7 +294,7 @@

    BaseGrapeVineParameters::BaseGrapeVineParameters ( - ) + ) @@ -309,8 +315,7 @@

    BaseGrapeVineParameters::BaseGrapeVineParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -339,8 +344,7 @@

    void BaseGrapeVineParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -355,7 +359,7 @@

    BaseCanopyParameters.

    -

    Reimplemented in VSPGrapevineParameters, SplitGrapevineParameters, UnilateralGrapevineParameters, and GobletGrapevineParameters.

    +

    Reimplemented in GobletGrapevineParameters, SplitGrapevineParameters, UnilateralGrapevineParameters, and VSPGrapevineParameters.

    Definition at line 616 of file CanopyGenerator.cpp.

    @@ -373,19 +377,12 @@

    void BaseGrapeVineParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -399,7 +396,7 @@

    BaseCanopyParameters.

    -

    Reimplemented in VSPGrapevineParameters, SplitGrapevineParameters, UnilateralGrapevineParameters, and GobletGrapevineParameters.

    +

    Reimplemented in GobletGrapevineParameters, SplitGrapevineParameters, UnilateralGrapevineParameters, and VSPGrapevineParameters.

    Definition at line 612 of file CanopyGenerator.cpp.

    @@ -414,8 +411,7 @@

    void BaseGrapeVineParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -1214,7 +1210,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_base_grape_vine_parameters.png b/doc/html/struct_base_grape_vine_parameters.png index da9eeb75595d4de6de3c2744ed7a44436f075ff4..0da0a298e2b87bfa2d7b53313dcc4f3a8ba067c4 100644 GIT binary patch delta 21 dcmZ1|uux!v9oK^g5B~rEZ+bRt$wrTx>;QXp3#|YE delta 21 dcmZ1|uux!v9oK;a2mb&6A3W*uij5vO*#UU!3$XwI diff --git a/doc/html/struct_bean_parameters.html b/doc/html/struct_bean_parameters.html index 81a59f79c..2792da552 100644 --- a/doc/html/struct_bean_parameters.html +++ b/doc/html/struct_bean_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the bean plant canopy. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,88 +120,82 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     BeanParameters ()
     BeanParameters ()
     Default constructor.
     
     BeanParameters (const pugi::xml_node canopy_node)
     BeanParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float leaf_length
    float leaf_length
     Maximum width of leaves.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    helios::RGBcolor shoot_color
    helios::RGBcolor shoot_color
     Color of shoots.
     
    int shoot_subdivisions
    int shoot_subdivisions
     Number of radial subdivisions for shoot tubes.
     
    float stem_radius
    float stem_radius
     Radius of main stem at base.
     
    float stem_length
    float stem_length
     Length of stems before splitting to leaflets.
     
    float leaflet_length
    float leaflet_length
     Length of the leaflet from base to tip leaf.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float germination_probability
    float germination_probability
     Probability that a plant in the canopy germinated.
     
    float pod_length
    float pod_length
     Length of bean pods.
     
    helios::RGBcolor pod_color
    helios::RGBcolor pod_color
     Color of bean pods.
     
    uint pod_subdivisions
    uint pod_subdivisions
     Number of lengthwise subdivisions making up pods.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -207,7 +213,7 @@

    BeanParameters::BeanParameters ( - ) + ) @@ -228,8 +234,7 @@

    BeanParameters::BeanParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -258,8 +263,7 @@

    void BeanParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -290,19 +294,12 @@

    void BeanParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -329,8 +326,7 @@

    void BeanParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -626,7 +622,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_bean_parameters.png b/doc/html/struct_bean_parameters.png index 157662f4f5e0b668aa7151894c1f73d90f1615bd..8fbf13c2b263f14f2d878d3121547d64c843b742 100644 GIT binary patch delta 21 dcmeBW?PZ-{$MxXBga7~ko1P6@veCnp2>^A53f2Gs delta 21 dcmeBW?PZ-{$93Sqf&c&i2T!`ZVxxyE6997i3fcew diff --git a/doc/html/struct_camera_calibration.html b/doc/html/struct_camera_calibration.html index 78d561b64..fc12b056e 100644 --- a/doc/html/struct_camera_calibration.html +++ b/doc/html/struct_camera_calibration.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Structures | @@ -94,7 +106,7 @@

    Camera calibration structure used for camera calibration tasks. - More...

    + More...

    #include <CameraCalibration.h>

    @@ -106,55 +118,55 @@
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     CameraCalibration (helios::Context *context)
     CameraCalibration (helios::Context *context)
     
    std::vector< uint > addCheckerboard (const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation, const helios::vec3 &rotationrad, bool firstblack=true)
    std::vector< uint > addCheckerboard (const helios::int2 &boardsidesize, const float &patchsize, const helios::vec3 &centrelocation, const helios::vec3 &rotationrad, bool firstblack=true)
     Add checker board geometry into context.
     
    std::vector< uint > addDefaultCheckerboard (const helios::vec3 &centrelocation, const helios::vec3 &rotationrad)
    std::vector< uint > addDefaultCheckerboard (const helios::vec3 &centrelocation, const helios::vec3 &rotationrad)
     Add default checker board geometry into context.
     
    std::vector< uint > addColorboard (const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector< std::vector< helios::RGBcolor > > &colorassignment={}, const std::vector< std::vector< std::string > > &spectrumassignment={})
    std::vector< uint > addColorboard (const helios::vec3 &centrelocation, float patchsize, const helios::vec3 &rotationrad, const std::vector< std::vector< helios::RGBcolor > > &colorassignment={}, const std::vector< std::vector< std::string > > &spectrumassignment={})
     Add color board geometry into context.
     
    std::vector< uint > addDefaultColorboard (const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
    std::vector< uint > addDefaultColorboard (const helios::vec3 &centrelocation, float patchsize=0.5, const helios::vec3 &rotationrad=helios::make_vec3(0, 0, 0))
     Set reflectivity for a specific UUID.
     
    std::vector< uint > getColorBoardUUIDs ()
    std::vector< uint > getColorBoardUUIDs ()
     
    bool writeSpectralXMLfile (const std::string &filename, const std::string &note, const std::string &label, std::vector< helios::vec2 > *spectrum)
    bool writeSpectralXMLfile (const std::string &filename, const std::string &note, const std::string &label, std::vector< helios::vec2 > *spectrum)
     Write XML file from spectral vectors containing both wavelengths and spectral values.
     
    bool loadXMLlabeldata (const std::string &filename, const std::string &labelname, std::vector< helios::vec2 > &spectraldata)
    bool loadXMLlabeldata (const std::string &filename, const std::string &labelname, std::vector< helios::vec2 > &spectraldata)
     Load XML file and save data in spectral vectors containing both wavelengths and spectral values.
     
    float GradientDescent (std::vector< std::vector< float > > *expandedcameraspectra, const std::vector< std::vector< float > > &expandedconstinput, const float &learningrate, const std::vector< std::vector< float > > &truevalues)
    float GradientDescent (std::vector< std::vector< float > > *expandedcameraspectra, const std::vector< std::vector< float > > &expandedconstinput, const float &learningrate, const std::vector< std::vector< float > > &truevalues)
     Reduce calibration error based on gradient descent.
     
    std::vector< float > updateCameraResponseSpectra (const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
    std::vector< float > updateCameraResponseSpectra (const std::vector< std::string > &camerareponselabels, const std::string &label, const std::map< uint, std::vector< helios::vec2 > > &simulatedinputspectra, const std::vector< std::vector< float > > &truevalues)
     Update camera response spectra.
     
    void preprocessSpectra (const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
    void preprocessSpectra (const std::vector< std::string > &sourcelabels, const std::vector< std::string > &cameralabels, std::vector< std::string > &objectlabels, helios::vec2 &wavelengthrange, const std::string &targetlabel="")
     Preprocess all spectra for modelling.
     
    void distortImage (const std::string &cameralabel, const std::vector< std::string > &bandlabels, const helios::vec2 &focalxy, std::vector< double > &distCoeffs, helios::int2 camerareoslution)
    void distortImage (const std::string &cameralabel, const std::vector< std::string > &bandlabels, const helios::vec2 &focalxy, std::vector< double > &distCoeffs, helios::int2 camerareoslution)
     Get distorted image.
     
    float getCameraResponseScale (const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
    float getCameraResponseScale (const std::string &cameralabel, const helios::int2 cameraresolution, const std::vector< std::string > &bandlabels, const std::vector< std::vector< float > > &truevalues)
     Get camera spectral response scale.
     
    std::vector< uint > readROMCCanopy ()
    std::vector< uint > readROMCCanopy ()
     Read ROMC canopy file (Used for self test).
     
    void writeCalibratedCameraResponses (const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
    void writeCalibratedCameraResponses (const std::vector< std::string > &camerareponselabels, const std::string &calibratemark, float scale)
     Write calibrated camera response spectra.
     
    - + - +

    Data Fields

    GradientDescentParameters responseupdateparameters
    GradientDescentParameters responseupdateparameters
     
    std::map< std::string, std::map< std::string, std::vector< helios::vec2 > > > processedspectra
    std::map< std::string, std::map< std::string, std::vector< helios::vec2 > > > processedspectra
     

    Detailed Description

    @@ -174,8 +186,7 @@

    CameraCalibration::CameraCalibration ( - helios::Context *  - context) + helios::Context * context) @@ -200,37 +211,27 @@

    std::vector< uint > CameraCalibration::addCheckerboard ( - const helios::int2 &  - boardsidesize, + const helios::int2 & boardsidesize, - const float &  - patchsize, + const float & patchsize, - const helios::vec3 &  - centrelocation, + const helios::vec3 & centrelocation, - const helios::vec3 &  - rotationrad, + const helios::vec3 & rotationrad, - bool  - firstblack = true  - - - - ) - + bool firstblack = true )

    @@ -260,37 +261,27 @@

    std::vector< uint > CameraCalibration::addColorboard ( - const helios::vec3 &  - centrelocation, + const helios::vec3 & centrelocation, - float  - patchsize, + float patchsize, - const helios::vec3 &  - rotationrad, + const helios::vec3 & rotationrad, - const std::vector< std::vector< helios::RGBcolor > > &  - colorassignment = {}, + const std::vector< std::vector< helios::RGBcolor > > & colorassignment = {}, - const std::vector< std::vector< std::string > > &  - spectrumassignment = {}  - - - - ) - + const std::vector< std::vector< std::string > > & spectrumassignment = {} )

    @@ -320,19 +311,12 @@

    std::vector< uint > CameraCalibration::addDefaultCheckerboard ( - const helios::vec3 &  - centrelocation, + const helios::vec3 & centrelocation, - const helios::vec3 &  - rotationrad  - - - - ) - + const helios::vec3 & rotationrad )

    @@ -359,25 +343,17 @@

    std::vector< uint > CameraCalibration::addDefaultColorboard ( - const helios::vec3 &  - centrelocation, + const helios::vec3 & centrelocation, - float  - patchsize = 0.5, + float patchsize = 0.5, - const helios::vec3 &  - rotationrad = helios::make_vec3(0,0,0)  - - - - ) - + const helios::vec3 & rotationrad = helios::make_vec3(0,0,0) )

    @@ -409,37 +385,27 @@

    void CameraCalibration::distortImage ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const helios::vec2 &  - focalxy, + const helios::vec2 & focalxy, - std::vector< double > &  - distCoeffs, + std::vector< double > & distCoeffs, - helios::int2  - camerareoslution  - - - - ) - + helios::int2 camerareoslution )

    @@ -470,31 +436,22 @@

    float CameraCalibration::getCameraResponseScale ( - const std::string &  - cameralabel, + const std::string & cameralabel, - const helios::int2  - cameraresolution, + const helios::int2 cameraresolution, - const std::vector< std::string > &  - bandlabels, + const std::vector< std::string > & bandlabels, - const std::vector< std::vector< float > > &  - truevalues  - - - - ) - + const std::vector< std::vector< float > > & truevalues )

    @@ -523,7 +480,7 @@

    std::vector< uint > CameraCalibration::getColorBoardUUIDs ( - ) + ) @@ -542,31 +499,22 @@

    float CameraCalibration::GradientDescent ( - std::vector< std::vector< float > > *  - expandedcameraspectra, + std::vector< std::vector< float > > * expandedcameraspectra, - const std::vector< std::vector< float > > &  - expandedconstinput, + const std::vector< std::vector< float > > & expandedconstinput, - const float &  - learningrate, + const float & learningrate, - const std::vector< std::vector< float > > &  - truevalues  - - - - ) - + const std::vector< std::vector< float > > & truevalues )

    @@ -596,25 +544,17 @@

    bool CameraCalibration::loadXMLlabeldata ( - const std::string &  - filename, + const std::string & filename, - const std::string &  - labelname, + const std::string & labelname, - std::vector< helios::vec2 > &  - spectraldata  - - - - ) - + std::vector< helios::vec2 > & spectraldata )

    @@ -642,37 +582,27 @@

    void CameraCalibration::preprocessSpectra ( - const std::vector< std::string > &  - sourcelabels, + const std::vector< std::string > & sourcelabels, - const std::vector< std::string > &  - cameralabels, + const std::vector< std::string > & cameralabels, - std::vector< std::string > &  - objectlabels, + std::vector< std::string > & objectlabels, - helios::vec2 &  - wavelengthrange, + helios::vec2 & wavelengthrange, - const std::string &  - targetlabel = ""  - - - - ) - + const std::string & targetlabel = "" )

    @@ -703,7 +633,7 @@

    std::vector< uint > CameraCalibration::readROMCCanopy ( - ) + ) @@ -725,31 +655,22 @@

    std::vector< float > CameraCalibration::updateCameraResponseSpectra ( - const std::vector< std::string > &  - camerareponselabels, + const std::vector< std::string > & camerareponselabels, - const std::string &  - label, + const std::string & label, - const std::map< uint, std::vector< helios::vec2 > > &  - simulatedinputspectra, + const std::map< uint, std::vector< helios::vec2 > > & simulatedinputspectra, - const std::vector< std::vector< float > > &  - truevalues  - - - - ) - + const std::vector< std::vector< float > > & truevalues )

    @@ -781,25 +702,17 @@

    void CameraCalibration::writeCalibratedCameraResponses ( - const std::vector< std::string > &  - camerareponselabels, + const std::vector< std::string > & camerareponselabels, - const std::string &  - calibratemark, + const std::string & calibratemark, - float  - scale  - - - - ) - + float scale )

    @@ -827,31 +740,22 @@

    bool CameraCalibration::writeSpectralXMLfile ( - const std::string &  - filename, + const std::string & filename, - const std::string &  - note, + const std::string & note, - const std::string &  - label, + const std::string & label, - std::vector< helios::vec2 > *  - spectrum  - - - - ) - + std::vector< helios::vec2 > * spectrum )

    @@ -911,7 +815,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_camera_calibration_1_1_gradient_descent_parameters.html b/doc/html/struct_camera_calibration_1_1_gradient_descent_parameters.html index e1f2c6d58..64493ba6c 100644 --- a/doc/html/struct_camera_calibration_1_1_gradient_descent_parameters.html +++ b/doc/html/struct_camera_calibration_1_1_gradient_descent_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -96,19 +108,19 @@

    Parameter struct for gradient descent. - More...

    + More...

    #include <CameraCalibration.h>

    - + - + - + - +

    Data Fields

    float learningrate =0.000001
    float learningrate =0.000001
     
    int maxiteration = 500
    int maxiteration = 500
     
    float minloss = 0.01
    float minloss = 0.01
     
    std::vector< float > camerarescales = {1,1,1}
    std::vector< float > camerarescales = {1,1,1}
     

    Detailed Description

    @@ -186,7 +198,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_camera_properties.html b/doc/html/struct_camera_properties.html index d67cb3044..b611c9273 100644 --- a/doc/html/struct_camera_properties.html +++ b/doc/html/struct_camera_properties.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,32 +105,32 @@

    Properties defining a radiation camera. - More...

    + More...

    #include <RadiationModel.h>

    - + - +

    Public Member Functions

    bool operator!= (const CameraProperties &rhs) const
    bool operator!= (const CameraProperties &rhs) const
     
    bool operator== (const CameraProperties &rhs) const
    bool operator== (const CameraProperties &rhs) const
     
    - + - + - + - + - +

    Data Fields

    helios::int2 camera_resolution
    helios::int2 camera_resolution
     Camera sensor resolution (number of pixels) in the horizontal (.x) and vertical (.y) directions.
     
    float focal_plane_distance
    float focal_plane_distance
     Distance from the viewing plane to the focal plane.
     
    float lens_diameter = 0.05
    float lens_diameter = 0.05
     Diameter of the camera lens (lens_diameter = 0 gives a 'pinhole' camera with everything in focus)
     
    float HFOV = 20.f
    float HFOV = 20.f
     Camera horizontal field of view in degrees.
     
    float FOV_aspect_ratio = 1.f
    float FOV_aspect_ratio = 1.f
     Physical dimensions of the pixel array sensor in the horizontal (.x) and vertical (.y) directions.
     
    @@ -139,7 +151,7 @@

    CameraProperties::CameraProperties ( - ) + ) @@ -167,8 +179,7 @@

    bool CameraProperties::operator!= ( - const CameraProperties &  - rhs) + const CameraProperties & rhs) const @@ -195,8 +206,7 @@

    bool CameraProperties::operator== ( - const CameraProperties &  - rhs) + const CameraProperties & rhs) const @@ -308,7 +318,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_colormap.html b/doc/html/struct_colormap.html index b9fed4163..6f6d26a7e 100644 --- a/doc/html/struct_colormap.html +++ b/doc/html/struct_colormap.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions
    @@ -92,31 +104,31 @@

    RGB color map. - More...

    + More...

    #include <Visualizer.h>

    - + - + - + - + - + - + - +

    Public Member Functions

     Colormap (const std::vector< helios::RGBcolor > &ctable, const std::vector< float > &clocs, int size, float minval_, float maxval_)
     Colormap (const std::vector< helios::RGBcolor > &ctable, const std::vector< float > &clocs, int size, float minval_, float maxval_)
     
    void set (const std::vector< helios::RGBcolor > &ctable, const std::vector< float > &clocs, int size, float minval_, float maxval_)
    void set (const std::vector< helios::RGBcolor > &ctable, const std::vector< float > &clocs, int size, float minval_, float maxval_)
     
    helios::RGBcolor query (float x) const
    helios::RGBcolor query (float x) const
     
    void setRange (float min, float max)
    void setRange (float min, float max)
     
    helios::vec2 getRange () const
    helios::vec2 getRange () const
     
    float getLowerLimit () const
    float getLowerLimit () const
     
    float getUpperLimit () const
    float getUpperLimit () const
     

    Detailed Description

    RGB color map.

    -

    Definition at line 165 of file Visualizer.h.

    +

    Definition at line 175 of file Visualizer.h.

    Constructor & Destructor Documentation

    ◆ Colormap() [1/2]

    @@ -130,7 +142,7 @@

    Colormap::Colormap ( - ) + ) @@ -141,7 +153,7 @@

    -

    Definition at line 168 of file Visualizer.h.

    +

    Definition at line 178 of file Visualizer.h.

    @@ -157,37 +169,27 @@

    Colormap::Colormap ( - const std::vector< helios::RGBcolor > &  - ctable, + const std::vector< helios::RGBcolor > & ctable, - const std::vector< float > &  - clocs, + const std::vector< float > & clocs, - int  - size, + int size, - float  - minval_, + float minval_, - float  - maxval_  - - - - ) - + float maxval_ ) @@ -197,7 +199,7 @@

    -

    Definition at line 170 of file Visualizer.h.

    +

    Definition at line 180 of file Visualizer.h.

    @@ -214,7 +216,7 @@

    float Colormap::getLowerLimit ( - ) + ) const @@ -225,7 +227,7 @@

    -

    Definition at line 248 of file Visualizer.h.

    +

    Definition at line 258 of file Visualizer.h.

    @@ -241,7 +243,7 @@

    helios::vec2 Colormap::getRange ( - ) + ) const @@ -252,7 +254,7 @@

    -

    Definition at line 244 of file Visualizer.h.

    +

    Definition at line 254 of file Visualizer.h.

    @@ -268,7 +270,7 @@

    float Colormap::getUpperLimit ( - ) + ) const @@ -279,7 +281,7 @@

    -

    Definition at line 252 of file Visualizer.h.

    +

    Definition at line 262 of file Visualizer.h.

    @@ -295,8 +297,7 @@

    helios::RGBcolor Colormap::query ( - float  - x) + float x) const @@ -307,7 +308,7 @@

    -

    Definition at line 216 of file Visualizer.h.

    +

    Definition at line 226 of file Visualizer.h.

    @@ -323,37 +324,27 @@

    void Colormap::set ( - const std::vector< helios::RGBcolor > &  - ctable, + const std::vector< helios::RGBcolor > & ctable, - const std::vector< float > &  - clocs, + const std::vector< float > & clocs, - int  - size, + int size, - float  - minval_, + float minval_, - float  - maxval_  - - - - ) - + float maxval_ ) @@ -363,7 +354,7 @@

    -

    Definition at line 176 of file Visualizer.h.

    +

    Definition at line 186 of file Visualizer.h.

    @@ -379,19 +370,12 @@

    void Colormap::setRange ( - float  - min, + float min, - float  - max  - - - - ) - + float max ) @@ -401,7 +385,7 @@

    -

    Definition at line 239 of file Visualizer.h.

    +

    Definition at line 249 of file Visualizer.h.

    @@ -411,7 +395,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_conical_crowns_canopy_parameters.html b/doc/html/struct_conical_crowns_canopy_parameters.html index 14143643a..0ec43ec06 100644 --- a/doc/html/struct_conical_crowns_canopy_parameters.html +++ b/doc/html/struct_conical_crowns_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the canopy with conical crowns. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,78 +120,72 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     ConicalCrownsCanopyParameters ()
     ConicalCrownsCanopyParameters ()
     Default constructor.
     
     ConicalCrownsCanopyParameters (const pugi::xml_node canopy_node)
     ConicalCrownsCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    helios::vec2 leaf_size
    helios::vec2 leaf_size
     Length of leaf in x- and y- directions (prior to rotation)
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves. If left empty, no texture will be used.
     
    helios::RGBcolor leaf_color
    helios::RGBcolor leaf_color
     Leaf color if no texture map file is provided.
     
    std::string leaf_angle_distribution
    std::string leaf_angle_distribution
     Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile", "plagiophile", "extremophile".
     
    float leaf_area_density
    float leaf_area_density
     One-sided leaf area density within spherical crowns.
     
    float crown_radius
    float crown_radius
     Radius of the conical crowns at the base.
     
    float crown_height
    float crown_height
     Height of the conical crowns.
     
    std::string canopy_configuration
    std::string canopy_configuration
     Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arranged canopy with non-overlapping crowns (canopy_configuration="random").
     
    helios::vec2 plant_spacing
    helios::vec2 plant_spacing
     Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random' this is the average spacing.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -197,7 +203,7 @@

    ConicalCrownsCanopyParameters::ConicalCrownsCanopyParameters ( - ) + ) @@ -218,8 +224,7 @@

    ConicalCrownsCanopyParameters::ConicalCrownsCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -248,8 +253,7 @@

    void ConicalCrownsCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -280,19 +284,12 @@

    void ConicalCrownsCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -319,8 +316,7 @@

    void ConicalCrownsCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -560,7 +556,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_conical_crowns_canopy_parameters.png b/doc/html/struct_conical_crowns_canopy_parameters.png index 02441dca1eeaf965eaf54a2b26d4f531401d67be..c35fb6b5527a259bfc7f3565a11fe495d18b2940 100644 GIT binary patch delta 21 dcmZ3&wuEhh9oK^g5B~rEZ+bRt$wrSmOaOXv3!MM} delta 21 dcmZ3&wuEhh9oK;a2mb&6A3W*uij5w3m;iU@3!wl2 diff --git a/doc/html/struct_dupex.html b/doc/html/struct_dupex.html index aaa5e81e1..675d20de4 100644 --- a/doc/html/struct_dupex.html +++ b/doc/html/struct_dupex.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,22 +106,22 @@ - + - + - + - +

    Public Member Functions

     Dupex (float a, float b)
     Dupex (float a, float b)
     
     Dupex (float a, float b, int x)
     Dupex (float a, float b, int x)
     
     Dupex (const Dupex &p)
     Dupex (const Dupex &p)
     
    Dupex & operator= (const Dupex &p)
    Dupex & operator= (const Dupex &p)
     
    - + - + - +

    Data Fields

    int id
    int id
     
    float r
    float r
     
    float c
    float c
     

    Detailed Description

    @@ -128,7 +140,7 @@

    Dupex::Dupex ( - ) + ) @@ -155,19 +167,12 @@

    Dupex::Dupex ( - float  - a, + float a, - float  - b  - - - - ) - + float b ) @@ -193,25 +198,17 @@

    Dupex::Dupex ( - float  - a, + float a, - float  - b, + float b, - int  - x  - - - - ) - + int x ) @@ -237,8 +234,7 @@

    Dupex::Dupex ( - const Dupex &  - p) + const Dupex & p) @@ -266,8 +262,7 @@

    Dupex & Dupex::operator= ( - const Dupex &  - p) + const Dupex & p) @@ -337,7 +332,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_empirical_model_coefficients.html b/doc/html/struct_empirical_model_coefficients.html index 9547c9de8..109ff3316 100644 --- a/doc/html/struct_empirical_model_coefficients.html +++ b/doc/html/struct_empirical_model_coefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -93,25 +105,25 @@ - + - + - + - + - + - + - + - + - + - +

    Data Fields

    float Tref
    float Tref
     
    float Ci_ref
    float Ci_ref
     
    float Asat
    float Asat
     
    float theta
    float theta
     
    float Tmin
    float Tmin
     
    float Topt
    float Topt
     
    float q
    float q
     
    float R
    float R
     
    float ER
    float ER
     
    float kC
    float kC
     

    Detailed Description

    @@ -130,7 +142,7 @@

    EmpiricalModelCoefficients::EmpiricalModelCoefficients ( - ) + ) @@ -312,7 +324,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_farquhar_model_coefficients.html b/doc/html/struct_farquhar_model_coefficients.html index 7cd46cd2c..b4ebd8b8a 100644 --- a/doc/html/struct_farquhar_model_coefficients.html +++ b/doc/html/struct_farquhar_model_coefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -95,73 +107,73 @@ - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

    void setVcmax (float Vcmax_25C, float rate_of_increase_dHa=65.33f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
    void setVcmax (float Vcmax_25C, float rate_of_increase_dHa=65.33f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
     
    void setJmax (float Jmax_25C, float rate_of_increase_dHa=46.36f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
    void setJmax (float Jmax_25C, float rate_of_increase_dHa=46.36f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
     
    void setTPU (float TPU_25C, float rate_of_increase_dHa=46.0f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
    void setTPU (float TPU_25C, float rate_of_increase_dHa=46.0f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
     
    void setRd (float Rd_25C, float rate_of_increase_dHa=46.39f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
    void setRd (float Rd_25C, float rate_of_increase_dHa=46.39f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
     
    void setQuantumEfficiency_alpha (float alpha_25C, float rate_of_increase_dHa=0.f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
    void setQuantumEfficiency_alpha (float alpha_25C, float rate_of_increase_dHa=0.f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
     
    void setLightResponseCurvature_theta (float theta_25C, float rate_of_increase_dHa=0.f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
    void setLightResponseCurvature_theta (float theta_25C, float rate_of_increase_dHa=0.f, float optimum_temperature_in_C=10000.f, float rate_of_decrease_dHd=1000.f)
     
    PhotosyntheticTemperatureResponseParameters getVcmaxTempResponse ()
    PhotosyntheticTemperatureResponseParameters getVcmaxTempResponse ()
     
    PhotosyntheticTemperatureResponseParameters getJmaxTempResponse ()
    PhotosyntheticTemperatureResponseParameters getJmaxTempResponse ()
     
    PhotosyntheticTemperatureResponseParameters getTPUTempResponse ()
    PhotosyntheticTemperatureResponseParameters getTPUTempResponse ()
     
    PhotosyntheticTemperatureResponseParameters getRdTempResponse ()
    PhotosyntheticTemperatureResponseParameters getRdTempResponse ()
     
    PhotosyntheticTemperatureResponseParameters getQuantumEfficiencyTempResponse ()
    PhotosyntheticTemperatureResponseParameters getQuantumEfficiencyTempResponse ()
     
    PhotosyntheticTemperatureResponseParameters getLightResponseCurvatureTempResponse ()
    PhotosyntheticTemperatureResponseParameters getLightResponseCurvatureTempResponse ()
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    int TPU_flag
    int TPU_flag
     
    float Vcmax
    float Vcmax
     
    float Jmax
    float Jmax
     
    float Rd
    float Rd
     
    float alpha
    float alpha
     
    float O
    float O
     
    float c_Rd
    float c_Rd
     
    float c_Vcmax
    float c_Vcmax
     
    float c_Jmax
    float c_Jmax
     
    float c_Gamma
    float c_Gamma
     
    float c_Kc
    float c_Kc
     
    float c_Ko
    float c_Ko
     
    float dH_Rd
    float dH_Rd
     
    float dH_Vcmax
    float dH_Vcmax
     
    float dH_Jmax
    float dH_Jmax
     
    float dH_Gamma
    float dH_Gamma
     
    float dH_Kc
    float dH_Kc
     
    float dH_Ko
    float dH_Ko
     
    - +

    Friends

    class PhotosynthesisModel
    class PhotosynthesisModel
     

    Detailed Description

    @@ -180,7 +192,7 @@

    FarquharModelCoefficients::FarquharModelCoefficients ( - ) + ) @@ -208,7 +220,7 @@

    PhotosyntheticTemperatureResponseParameters FarquharModelCoefficients::getJmaxTempResponse ( - ) + ) @@ -235,7 +247,7 @@

    PhotosyntheticTemperatureResponseParameters FarquharModelCoefficients::getLightResponseCurvatureTempResponse ( - ) + ) @@ -262,7 +274,7 @@

    PhotosyntheticTemperatureResponseParameters FarquharModelCoefficients::getQuantumEfficiencyTempResponse ( - ) + ) @@ -289,7 +301,7 @@

    PhotosyntheticTemperatureResponseParameters FarquharModelCoefficients::getRdTempResponse ( - ) + ) @@ -316,7 +328,7 @@

    PhotosyntheticTemperatureResponseParameters FarquharModelCoefficients::getTPUTempResponse ( - ) + ) @@ -343,7 +355,7 @@

    PhotosyntheticTemperatureResponseParameters FarquharModelCoefficients::getVcmaxTempResponse ( - ) + ) @@ -370,31 +382,22 @@

    void FarquharModelCoefficients::setJmax ( - float  - Jmax_25C, + float Jmax_25C, - float  - rate_of_increase_dHa = 46.36f, + float rate_of_increase_dHa = 46.36f, - float  - optimum_temperature_in_C = 10000.f, + float optimum_temperature_in_C = 10000.f, - float  - rate_of_decrease_dHd = 1000.f  - - - - ) - + float rate_of_decrease_dHd = 1000.f ) @@ -420,31 +423,22 @@

    void FarquharModelCoefficients::setLightResponseCurvature_theta ( - float  - theta_25C, + float theta_25C, - float  - rate_of_increase_dHa = 0.f, + float rate_of_increase_dHa = 0.f, - float  - optimum_temperature_in_C = 10000.f, + float optimum_temperature_in_C = 10000.f, - float  - rate_of_decrease_dHd = 1000.f  - - - - ) - + float rate_of_decrease_dHd = 1000.f ) @@ -470,31 +464,22 @@

    void FarquharModelCoefficients::setQuantumEfficiency_alpha ( - float  - alpha_25C, + float alpha_25C, - float  - rate_of_increase_dHa = 0.f, + float rate_of_increase_dHa = 0.f, - float  - optimum_temperature_in_C = 10000.f, + float optimum_temperature_in_C = 10000.f, - float  - rate_of_decrease_dHd = 1000.f  - - - - ) - + float rate_of_decrease_dHd = 1000.f ) @@ -520,31 +505,22 @@

    void FarquharModelCoefficients::setRd ( - float  - Rd_25C, + float Rd_25C, - float  - rate_of_increase_dHa = 46.39f, + float rate_of_increase_dHa = 46.39f, - float  - optimum_temperature_in_C = 10000.f, + float optimum_temperature_in_C = 10000.f, - float  - rate_of_decrease_dHd = 1000.f  - - - - ) - + float rate_of_decrease_dHd = 1000.f ) @@ -570,31 +546,22 @@

    void FarquharModelCoefficients::setTPU ( - float  - TPU_25C, + float TPU_25C, - float  - rate_of_increase_dHa = 46.0f, + float rate_of_increase_dHa = 46.0f, - float  - optimum_temperature_in_C = 10000.f, + float optimum_temperature_in_C = 10000.f, - float  - rate_of_decrease_dHd = 1000.f  - - - - ) - + float rate_of_decrease_dHd = 1000.f ) @@ -620,31 +587,22 @@

    void FarquharModelCoefficients::setVcmax ( - float  - Vcmax_25C, + float Vcmax_25C, - float  - rate_of_increase_dHa = 65.33f, + float rate_of_increase_dHa = 65.33f, - float  - optimum_temperature_in_C = 10000.f, + float optimum_temperature_in_C = 10000.f, - float  - rate_of_decrease_dHd = 1000.f  - - - - ) - + float rate_of_decrease_dHd = 1000.f ) @@ -658,7 +616,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ PhotosynthesisModel

    @@ -978,7 +936,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_floral_bud.html b/doc/html/struct_floral_bud.html index 044f12ee3..4ba038b25 100644 --- a/doc/html/struct_floral_bud.html +++ b/doc/html/struct_floral_bud.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -93,31 +105,31 @@ - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    BudState state = BUD_DORMANT
    BudState state = BUD_DORMANT
     
    float time_counter = 0
    float time_counter = 0
     
    bool isterminal = false
    bool isterminal = false
     
    uint parent_index = 0
    uint parent_index = 0
     
    uint bud_index = 0
    uint bud_index = 0
     
    float current_fruit_scale_factor = 1
    float current_fruit_scale_factor = 1
     
    float previous_fruit_scale_factor = 0
    float previous_fruit_scale_factor = 0
     
    helios::vec3 base_position
    helios::vec3 base_position
     
    AxisRotation base_rotation
    AxisRotation base_rotation
     
    helios::vec3 bending_axis
    helios::vec3 bending_axis
     
    std::vector< helios::vec3 > inflorescence_bases
    std::vector< helios::vec3 > inflorescence_bases
     
    std::vector< uint > peduncle_objIDs
    std::vector< uint > peduncle_objIDs
     
    std::vector< uint > inflorescence_objIDs
    std::vector< uint > inflorescence_objIDs
     

    Detailed Description

    @@ -338,7 +350,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_goblet_grapevine_parameters.html b/doc/html/struct_goblet_grapevine_parameters.html index 8a4418bf3..cd45837c9 100644 --- a/doc/html/struct_goblet_grapevine_parameters.html +++ b/doc/html/struct_goblet_grapevine_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions
    @@ -92,7 +104,7 @@

    Parameters defining the grapevine canopy with goblet (vent a taille) trellis. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,187 +120,175 @@ - + - + - + - + - + - - + + - + - + - - - - - - - - + + - + - + - - - - - -

    Public Member Functions

     GobletGrapevineParameters ()
     GobletGrapevineParameters ()
     Default constructor.
     
     GobletGrapevineParameters (const pugi::xml_node canopy_node)
     GobletGrapevineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
     Default constructor.
     
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Additional Inherited Members

    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
     Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is the width at the base of the shoot.
     
    float leaf_width_spread
    float leaf_width_spread
     Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf width would be between leaf_width - leaf_width_spread and leaf_width + leaf_width_spread.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for trunks/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for trunk/cordon/shoot tubes.
     
    int wood_subdivisions_spread
    int wood_subdivisions_spread
     Spread value for the number of wood subdivisions. With any new canopy or plant generation, the maximum number of wood subdivisions would be between wood_subdivisions - wood_subdivisions_spread and wood_subdivisions + wood_subdivisions_spread.
     
    float dead_probability
    float dead_probability
     Probability for a plant to be dead, i.e. without any leaves or grapes.
     
    float missing_plant_probability
    float missing_plant_probability
     Probability for a plant to be missing.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float plant_spacing_spread
    float plant_spacing_spread
     Spread value for the plant spacing. The spacing between adjacent plants along a row would vary between plant_spacing - plant_spacing_spread and plant_spacing + plant_spacing_spread.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float row_spacing_spread
    float row_spacing_spread
     Spread value for the row spacing. This allows to vary the alignment of plants along a row. The spacing between two plants of adjacent rows would be between row_spacing - row_spacing_spread and row_spacing + row_spacing_spread.
     
    float trunk_height
    float trunk_height
     Distance between the ground and top of trunks.
     
    float trunk_height_spread
    float trunk_height_spread
     Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be between trunk_height - trunk_height_spread and trunk_height + trunk_height_spread.
     
    float trunk_radius
    float trunk_radius
     Radius of the trunk at the widest point.
     
    float trunk_radius_spread
    float trunk_radius_spread
     Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be between trunk_radius - trunk_radius_spread and trunk_radius + trunk_radius_spread.
     
    float cordon_length
    float cordon_length
     Length of the cordons. By default, half the plant spacing.
     
    float cordon_length_spread
    float cordon_length_spread
     Spread value for the cordon length. With any new canopy or plant generation, the cordon length would be between cordon_length - cordon_length_spread and cordon_length + cordon_length_spread.
     
    float cordon_height
    float cordon_height
     Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
     
    float cordon_height_spread
    float cordon_height_spread
     Spread value for the cordon height. With any new canopy or plant generation, the cordon height would be between cordon_height - cordon_height_spread and cordon_height + cordon_height_spread.
     
    float cordon_radius
    float cordon_radius
     Radius of cordon branches.
     
    float cordon_radius_spread
    float cordon_radius_spread
     Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would be between cordon_radius - cordon_radius_spread and cordon_radius + cordon_radius_spread.
     
    float shoot_length
    float shoot_length
     Length of shoots.
     
    float shoot_length_spread
    float shoot_length_spread
     Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be between shoot_length - shoot_length_spread and shoot_length + shoot_length_spread.
     
    float shoot_radius
    float shoot_radius
     Radius of shoot branches.
     
    float shoot_radius_spread
    float shoot_radius_spread
     Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be between shoot_radius - shoot_radius_spread and shoot_radius + shoot_radius_spread.
     
    uint shoots_per_cordon
    uint shoots_per_cordon
     Number of shoots on each cordon.
     
    uint shoots_per_cordon_spread
    uint shoots_per_cordon_spread
     Spread value for the number of shoots per cordon. With any new canopy or plant generation, the number of shoots per cordon would be between shoots_per_cordon - shoots_per_cordon_spread and shoots_per_cordon + shoots_per_cordon_spread.
     
    float leaf_spacing_fraction
    float leaf_spacing_fraction
     Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = 1 would give a leaf spacing equal to the leaf width.
     
    float leaf_spacing_fraction_spread
    float leaf_spacing_fraction_spread
     Spread value for the leaf spacing fraction. With any new canopy or plant generation, the leaf spacing fraction would be between leaf_spacing_fraction - leaf_spacing_fraction_spread and leaf_spacing_fraction + leaf_spacing_fraction_spread.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float grape_radius
    float grape_radius
     Radius of grape berries.
     
    float grape_radius_spread
    float grape_radius_spread
     Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be between grape_radius - grape_radius_spread and grape_radius + grape_radius_spread.
     
    float cluster_radius
    float cluster_radius
     Maximum horizontal radius of grape clusters.
     
    float cluster_radius_spread
    float cluster_radius_spread
     Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius would be between cluster_radius - cluster_radius_spread and cluster_radius + cluster_radius_spread.
     
    float cluster_height_max
    float cluster_height_max
     Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
     
    float cluster_height_max_spread
    float cluster_height_max_spread
     Spread value for the cluster height. With any new canopy or plant generation, the cluster height would be between cluster_height - cluster_height_spread and cluster_height + cluster_height_spread.
     
    helios::RGBcolor grape_color
    helios::RGBcolor grape_color
     Color of grapes.
     
    uint grape_subdivisions
    uint grape_subdivisions
     Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subdivisions)^2 triangles per grape berry)
     
    uint grape_subdivisions_spread
    uint grape_subdivisions_spread
     Spread value for the number of grape subdivisions. With any new canopy or plant generation, the number of grape subdivisions would be between grape_subdivisions - grape_subdivisions_spread and grape_subdivisions + grape_subdivisions_spread.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    float canopy_rotation_spread
    float canopy_rotation_spread
     Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotation would be between canopy_rotation - canopy_rotation_spread and canopy_rotation + canopy_rotation_spread.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -306,7 +306,7 @@

    GobletGrapevineParameters::GobletGrapevineParameters ( - ) + ) @@ -327,8 +327,7 @@

    GobletGrapevineParameters::GobletGrapevineParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -357,8 +356,7 @@

    void GobletGrapevineParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -389,19 +387,12 @@

    void GobletGrapevineParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -428,8 +419,7 @@

    void GobletGrapevineParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -454,7 +444,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_goblet_grapevine_parameters.png b/doc/html/struct_goblet_grapevine_parameters.png index d2f36441950f31c3814c8c9844a94d655a32013b..dc74d88278df82db11bbfde4e8280c592ccb221f 100644 GIT binary patch delta 21 dcmdnav7KXr9oK^g5B~rEZ+bRt$wrU&%m97e3)=ty delta 21 dcmdnav7KXr9oK;a2mb&6A3W*uij5xcnE`uJ3*P_$ diff --git a/doc/html/struct_grid_cell.html b/doc/html/struct_grid_cell.html index 01692c386..fcb760359 100644 --- a/doc/html/struct_grid_cell.html +++ b/doc/html/struct_grid_cell.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,34 +106,34 @@ - +

    Public Member Functions

     GridCell (helios::vec3 __center, helios::vec3 __global_anchor, helios::vec3 __size, helios::vec3 __global_size, float __azimuthal_rotation, helios::int3 __global_ijk, helios::int3 __global_count)
     GridCell (helios::vec3 __center, helios::vec3 __global_anchor, helios::vec3 __size, helios::vec3 __global_size, float __azimuthal_rotation, helios::int3 __global_ijk, helios::int3 __global_count)
     
    - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    helios::vec3 center
    helios::vec3 center
     
    helios::vec3 global_anchor
    helios::vec3 global_anchor
     
    helios::vec3 size
    helios::vec3 size
     
    helios::vec3 global_size
    helios::vec3 global_size
     
    helios::int3 global_ijk
    helios::int3 global_ijk
     
    helios::int3 global_count
    helios::int3 global_count
     
    float azimuthal_rotation
    float azimuthal_rotation
     
    float leaf_area
    float leaf_area
     
    float Gtheta
    float Gtheta
     
    float ground_height
    float ground_height
     
    float vegetation_height
    float vegetation_height
     
    float maximum_height
    float maximum_height
     

    Detailed Description

    @@ -140,49 +152,37 @@

    GridCell::GridCell ( - helios::vec3  - __center, + helios::vec3 __center, - helios::vec3  - __global_anchor, + helios::vec3 __global_anchor, - helios::vec3  - __size, + helios::vec3 __size, - helios::vec3  - __global_size, + helios::vec3 __global_size, - float  - __azimuthal_rotation, + float __azimuthal_rotation, - helios::int3  - __global_ijk, + helios::int3 __global_ijk, - helios::int3  - __global_count  - - - - ) - + helios::int3 __global_count ) @@ -395,7 +395,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_hit_point.html b/doc/html/struct_hit_point.html index a2df29a84..bc5e741be 100644 --- a/doc/html/struct_hit_point.html +++ b/doc/html/struct_hit_point.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,24 +106,24 @@ - +

    Public Member Functions

     HitPoint (int __scanID, helios::vec3 __position, helios::SphericalCoord __direction, helios::int2 __row_column, helios::RGBcolor __color, std::map< std::string, double > __data)
     HitPoint (int __scanID, helios::vec3 __position, helios::SphericalCoord __direction, helios::int2 __row_column, helios::RGBcolor __color, std::map< std::string, double > __data)
     
    - + - + - + - + - + - + - +

    Data Fields

    helios::vec3 position
    helios::vec3 position
     
    helios::SphericalCoord direction
    helios::SphericalCoord direction
     
    helios::int2 row_column
    helios::int2 row_column
     
    helios::RGBcolor color
    helios::RGBcolor color
     
    std::map< std::string, double > data
    std::map< std::string, double > data
     
    int gridcell
    int gridcell
     
    int scanID
    int scanID
     

    Detailed Description

    @@ -130,8 +142,7 @@

    HitPoint::HitPoint ( - void  - ) + void ) @@ -158,43 +169,32 @@

    HitPoint::HitPoint ( - int  - __scanID, + int __scanID, - helios::vec3  - __position, + helios::vec3 __position, - helios::SphericalCoord  - __direction, + helios::SphericalCoord __direction, - helios::int2  - __row_column, + helios::int2 __row_column, - helios::RGBcolor  - __color, + helios::RGBcolor __color, - std::map< std::string, double >  - __data  - - - - ) - + std::map< std::string, double > __data ) @@ -327,7 +327,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_homogeneous_canopy_parameters.html b/doc/html/struct_homogeneous_canopy_parameters.html index 25445be3a..010c885d6 100644 --- a/doc/html/struct_homogeneous_canopy_parameters.html +++ b/doc/html/struct_homogeneous_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the homogeneous canopy. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,72 +120,66 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     HomogeneousCanopyParameters ()
     HomogeneousCanopyParameters ()
     Default constructor.
     
     HomogeneousCanopyParameters (const pugi::xml_node canopy_node)
     HomogeneousCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    helios::vec2 leaf_size
    helios::vec2 leaf_size
     Length of leaf in x- and y- directions (prior to rotation)
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves. If left empty, no texture will be used.
     
    helios::RGBcolor leaf_color
    helios::RGBcolor leaf_color
     Leaf color if no texture map file is provided.
     
    std::string leaf_angle_distribution
    std::string leaf_angle_distribution
     Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile", "plagiophile", "extremophile".
     
    float leaf_area_index
    float leaf_area_index
     One-sided leaf area index of the canopy.
     
    float canopy_height
    float canopy_height
     Height of the canopy.
     
    helios::vec2 canopy_extent
    helios::vec2 canopy_extent
     Horizontal extent of the canopy in the x- and y-directions.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    std::string buffer
    std::string buffer
     String specifying whether leaves should be placed so that leaf edges do not fall outside the specified canopy dimensions ("z", "xyz", or "none")
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -191,7 +197,7 @@

    HomogeneousCanopyParameters::HomogeneousCanopyParameters ( - ) + ) @@ -212,8 +218,7 @@

    HomogeneousCanopyParameters::HomogeneousCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -242,8 +247,7 @@

    void HomogeneousCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -274,19 +278,12 @@

    void HomogeneousCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -313,8 +310,7 @@

    void HomogeneousCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -518,7 +514,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_homogeneous_canopy_parameters.png b/doc/html/struct_homogeneous_canopy_parameters.png index 86efbaf0ef6026faf394eb47559df63f5502911f..bb1b9e67f0e0069345cf72d56f843f60c04bc988 100644 GIT binary patch delta 21 dcmbQnHjQn99oK^g5B~rEZ+bRt$wrTJOaOQ$3v&Pf delta 21 dcmbQnHjQn99oK;a2mb&6A3W*uij5xUm;iN~3wHnj diff --git a/doc/html/struct_leaf_optics_properties.html b/doc/html/struct_leaf_optics_properties.html index c796a44ea..a43088466 100644 --- a/doc/html/struct_leaf_optics_properties.html +++ b/doc/html/struct_leaf_optics_properties.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,34 +105,34 @@

    LeafOptics model class. - More...

    + More...

    #include <LeafOptics.h>

    - +

    Public Member Functions

     LeafOpticsProperties (float chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float watermass, float drymass, float protein, float carbonconstituents)
     LeafOpticsProperties (float chlorophyllcontent, float carotenoidcontent, float anthocyancontent, float watermass, float drymass, float protein, float carbonconstituents)
     
    - + - + - + - + - + - + - + - + - +

    Data Fields

    float numberlayers = 1.5
    float numberlayers = 1.5
     
    float brownpigments = 0.f
    float brownpigments = 0.f
     
    float chlorophyllcontent = 30.f
    float chlorophyllcontent = 30.f
     
    float carotenoidcontent = 7.f
    float carotenoidcontent = 7.f
     
    float anthocyancontent = 1
    float anthocyancontent = 1
     
    float watermass = 0.015f
    float watermass = 0.015f
     
    float drymass = 0.09f
    float drymass = 0.09f
     
    float protein = 0.f
    float protein = 0.f
     
    float carbonconstituents = 0.f
    float carbonconstituents = 0.f
     

    Detailed Description

    @@ -141,7 +153,7 @@

    LeafOpticsProperties::LeafOpticsProperties ( - ) + ) @@ -168,49 +180,37 @@

    LeafOpticsProperties::LeafOpticsProperties ( - float  - chlorophyllcontent, + float chlorophyllcontent, - float  - carotenoidcontent, + float carotenoidcontent, - float  - anthocyancontent, + float anthocyancontent, - float  - watermass, + float watermass, - float  - drymass, + float drymass, - float  - protein, + float protein, - float  - carbonconstituents  - - - - ) - + float carbonconstituents ) @@ -375,7 +375,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_leaf_prototype.html b/doc/html/struct_leaf_prototype.html index 1dfe07007..102c80382 100644 --- a/doc/html/struct_leaf_prototype.html +++ b/doc/html/struct_leaf_prototype.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,70 +106,70 @@ - + - + - + - + - +

    Public Member Functions

     LeafPrototype (std::minstd_rand0 *generator)
     LeafPrototype (std::minstd_rand0 *generator)
     Constructor - sets random number generator.
     
     LeafPrototype ()
     LeafPrototype ()
     Constructor - does not set random number generator.
     
    void duplicate (const LeafPrototype &a)
    void duplicate (const LeafPrototype &a)
     
    LeafPrototype & operator= (const LeafPrototype &a)
    LeafPrototype & operator= (const LeafPrototype &a)
     Assignment operator.
     
    void sampleIdentifier ()
    void sampleIdentifier ()
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    uint(* prototype_function )(helios::Context *, LeafPrototype *prototype_parameters, int compound_leaf_index) = nullptr
    uint(* prototype_function )(helios::Context *, LeafPrototype *prototype_parameters, int compound_leaf_index) = nullptr
     Custom prototype function for creating leaf prototypes.
     
    std::string OBJ_model_file
    std::string OBJ_model_file
     OBJ model file to load for the leaf.
     
    std::map< int, std::string > leaf_texture_file
    std::map< int, std::string > leaf_texture_file
     Image texture file for the leaf.
     
    RandomParameter_float leaf_aspect_ratio
    RandomParameter_float leaf_aspect_ratio
     
    RandomParameter_float midrib_fold_fraction
    RandomParameter_float midrib_fold_fraction
     Fraction of folding along the leaf midrib. =0 means leaf is flat, =1 means leaf is completely folded in half along midrib.
     
    RandomParameter_float longitudinal_curvature
    RandomParameter_float longitudinal_curvature
     Leaf curvature factor along the longitudinal/length (x-direction). (+curves upward, -curved downward)
     
    RandomParameter_float lateral_curvature
    RandomParameter_float lateral_curvature
     Leaf curvature factor along the lateral/width (y-direction). (+curves upward, -curved downward)
     
    RandomParameter_float petiole_roll
    RandomParameter_float petiole_roll
     Creates a rolling at the leaf where the petiole attaches to the leaf blade.
     
    RandomParameter_float wave_period
    RandomParameter_float wave_period
     Period factor of leaf waves (sets how many waves there are along the leaf length)
     
    RandomParameter_float wave_amplitude
    RandomParameter_float wave_amplitude
     Amplitude of leaf waves (sets the height of leaf waves)
     
    RandomParameter_float leaf_buckle_length
    RandomParameter_float leaf_buckle_length
     Fraction of the leaf length where the leaf buckles under its weight.
     
    RandomParameter_float leaf_buckle_angle
    RandomParameter_float leaf_buckle_angle
     Angle of the leaf buckle (degrees)
     
    helios::vec3 leaf_offset
    helios::vec3 leaf_offset
     Amount to shift the leaf.
     
    uint subdivisions
    uint subdivisions
     Leaf subdivision count in each direction.
     
    uint unique_prototypes
    uint unique_prototypes
     Number of unique prototypes to generate.
     
    bool build_petiolule
    bool build_petiolule
     Add a petiolule to the base of the leaflet.
     
    uint unique_prototype_identifier = 0
    uint unique_prototype_identifier = 0
     

    Detailed Description

    @@ -176,8 +188,7 @@

    LeafPrototype::LeafPrototype ( - std::minstd_rand0 *  - generator) + std::minstd_rand0 * generator) @@ -206,7 +217,7 @@

    LeafPrototype::LeafPrototype ( - ) + ) @@ -236,8 +247,7 @@

    void LeafPrototype::duplicate ( - const LeafPrototype &  - a) + const LeafPrototype & a) @@ -264,8 +274,7 @@

    LeafPrototype & LeafPrototype::operator= ( - const LeafPrototype &  - a) + const LeafPrototype & a) @@ -294,7 +303,7 @@

    void LeafPrototype::sampleIdentifier ( - ) + ) @@ -621,7 +630,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_m_o_p_tcoefficients.html b/doc/html/struct_m_o_p_tcoefficients.html index 003425df7..ed85c6950 100644 --- a/doc/html/struct_m_o_p_tcoefficients.html +++ b/doc/html/struct_m_o_p_tcoefficients.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -92,15 +104,15 @@

    Coefficients for optimality-based Medlyn et al. (2011) stomatal conductance model. - More...

    + More...

    #include <StomatalConductanceModel.h>

    - + - +

    Data Fields

    float gs0
    float gs0
     
    float g1
    float g1
     

    Detailed Description

    @@ -120,7 +132,7 @@

    MOPTcoefficients::MOPTcoefficients ( - ) + ) @@ -174,7 +186,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_per_ray_data.html b/doc/html/struct_per_ray_data.html index b74df49c4..cadeba755 100644 --- a/doc/html/struct_per_ray_data.html +++ b/doc/html/struct_per_ray_data.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -95,25 +107,25 @@ - + - + - + - + - + - + - +

    Data Fields

    double strength
    double strength
     "strength" or amount of energy associated with the ray.
     
    uint origin_UUID
    uint origin_UUID
     UUID of primitive from which ray originated.
     
    bool face
    bool face
     Face of primitive from which ray was launched (true=top, false=bottom)
     
    float area
    float area
     Area of primitive (note for voxels, this is area density)
     
    uint seed
    uint seed
     Seed for curand random number generator.
     
    unsigned char periodic_depth
    unsigned char periodic_depth
     Number of periodic boundary intersections for ray.
     
    unsigned char source_ID
    unsigned char source_ID
     Numerical identifier for radiation source corresponding to each ray.
     
    @@ -255,7 +267,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_photosynthetic_temperature_response_parameters.html b/doc/html/struct_photosynthetic_temperature_response_parameters.html index 91f7041e7..d4c2588bb 100644 --- a/doc/html/struct_photosynthetic_temperature_response_parameters.html +++ b/doc/html/struct_photosynthetic_temperature_response_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,24 +106,24 @@ - + - + - + - +

    Public Member Functions

     PhotosyntheticTemperatureResponseParameters (float value_at_25C)
     PhotosyntheticTemperatureResponseParameters (float value_at_25C)
     
     PhotosyntheticTemperatureResponseParameters (float value_at_25C, float rate_of_increase_dHa)
     PhotosyntheticTemperatureResponseParameters (float value_at_25C, float rate_of_increase_dHa)
     
     PhotosyntheticTemperatureResponseParameters (float value_at_25C, float rate_of_increase_dHa, float optimum_temperature_in_C)
     PhotosyntheticTemperatureResponseParameters (float value_at_25C, float rate_of_increase_dHa, float optimum_temperature_in_C)
     
     PhotosyntheticTemperatureResponseParameters (float value_at_25C, float rate_of_increase_dHa, float optimum_temperature_in_C, float rate_of_decrease_dHd)
     PhotosyntheticTemperatureResponseParameters (float value_at_25C, float rate_of_increase_dHa, float optimum_temperature_in_C, float rate_of_decrease_dHd)
     
    - + - + - + - +

    Data Fields

    float value_at_25C
    float value_at_25C
     
    float dHa
    float dHa
     
    float dHd
    float dHd
     
    float Topt
    float Topt
     

    Detailed Description

    @@ -130,7 +142,7 @@

    PhotosyntheticTemperatureResponseParameters::PhotosyntheticTemperatureResponseParameters ( - ) + ) @@ -157,8 +169,7 @@

    PhotosyntheticTemperatureResponseParameters::PhotosyntheticTemperatureResponseParameters ( - float  - value_at_25C) + float value_at_25C) @@ -185,19 +196,12 @@

    PhotosyntheticTemperatureResponseParameters::PhotosyntheticTemperatureResponseParameters ( - float  - value_at_25C, + float value_at_25C, - float  - rate_of_increase_dHa  - - - - ) - + float rate_of_increase_dHa ) @@ -223,25 +227,17 @@

    PhotosyntheticTemperatureResponseParameters::PhotosyntheticTemperatureResponseParameters ( - float  - value_at_25C, + float value_at_25C, - float  - rate_of_increase_dHa, + float rate_of_increase_dHa, - float  - optimum_temperature_in_C  - - - - ) - + float optimum_temperature_in_C ) @@ -267,31 +263,22 @@

    PhotosyntheticTemperatureResponseParameters::PhotosyntheticTemperatureResponseParameters ( - float  - value_at_25C, + float value_at_25C, - float  - rate_of_increase_dHa, + float rate_of_increase_dHa, - float  - optimum_temperature_in_C, + float optimum_temperature_in_C, - float  - rate_of_decrease_dHd  - - - - ) - + float rate_of_decrease_dHd ) @@ -376,7 +363,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_phytomer.html b/doc/html/struct_phytomer.html index 25d85b6b7..ce703013d 100644 --- a/doc/html/struct_phytomer.html +++ b/doc/html/struct_phytomer.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -96,154 +108,154 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     Phytomer (const PhytomerParameters &params, Shoot *parent_shoot, uint phytomer_index, const helios::vec3 &parent_internode_axis, const helios::vec3 &parent_petiole_axis, helios::vec3 internode_base_origin, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, uint rank, PlantArchitecture *plantarchitecture_ptr, helios::Context *context_ptr)
     Phytomer (const PhytomerParameters &params, Shoot *parent_shoot, uint phytomer_index, const helios::vec3 &parent_internode_axis, const helios::vec3 &parent_petiole_axis, helios::vec3 internode_base_origin, const AxisRotation &shoot_base_rotation, float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, uint rank, PlantArchitecture *plantarchitecture_ptr, helios::Context *context_ptr)
     
    std::vector< helios::vec3 > getInternodeNodePositions () const
    std::vector< helios::vec3 > getInternodeNodePositions () const
     
    std::vector< float > getInternodeNodeRadii () const
    std::vector< float > getInternodeNodeRadii () const
     
    helios::vec3 getInternodeAxisVector (float stem_fraction) const
    helios::vec3 getInternodeAxisVector (float stem_fraction) const
     
    helios::vec3 getPetioleAxisVector (float stem_fraction, uint petiole_index) const
    helios::vec3 getPetioleAxisVector (float stem_fraction, uint petiole_index) const
     
    float getInternodeLength () const
    float getInternodeLength () const
     
    float getInternodeRadius () const
    float getInternodeRadius () const
     
    float getPetioleLength () const
    float getPetioleLength () const
     
    float getInternodeRadius (float stem_fraction) const
    float getInternodeRadius (float stem_fraction) const
     
    float getLeafArea () const
    float getLeafArea () const
     
    bool hasLeaf () const
    bool hasLeaf () const
     
    float calculateDownstreamLeafArea () const
    float calculateDownstreamLeafArea () const
     
    void setInternodeLengthScaleFraction (float internode_scale_factor_fraction, bool update_context_geometry)
    void setInternodeLengthScaleFraction (float internode_scale_factor_fraction, bool update_context_geometry)
     
    void scaleInternodeMaxLength (float scale_factor)
    void scaleInternodeMaxLength (float scale_factor)
     Scale the fully-elongated (maximum) internode length as a fraction of its current fully-elongated length.
     
    void setInternodeMaxLength (float internode_length_max_new)
    void setInternodeMaxLength (float internode_length_max_new)
     Set the fully-elongated (maximum) internode length.
     
    void setInternodeMaxRadius (float internode_radius_max_new)
    void setInternodeMaxRadius (float internode_radius_max_new)
     Set the maximum radius of the internode.
     
    void setLeafScaleFraction (float leaf_scale_factor_fraction)
    void setLeafScaleFraction (float leaf_scale_factor_fraction)
     Set the leaf scale as a fraction of its total fully-elongated scale factor. Value is uniformly applied for all leaves/leaflets and petioles in the phytomer.
     
    void setLeafPrototypeScale (float leaf_prototype_scale)
    void setLeafPrototypeScale (float leaf_prototype_scale)
     Set the fully-elongated (maximum) leaf prototype scale. Value is uniformly applied for all leaves/leaflets in the phytomer.
     
    void scaleLeafPrototypeScale (float scale_factor)
    void scaleLeafPrototypeScale (float scale_factor)
     
    void setInflorescenceScaleFraction (FloralBud &fbud, float inflorescence_scale_factor_fraction)
    void setInflorescenceScaleFraction (FloralBud &fbud, float inflorescence_scale_factor_fraction)
     
    void setPetioleBase (const helios::vec3 &base_position)
    void setPetioleBase (const helios::vec3 &base_position)
     
    void rotateLeaf (uint petiole_index, uint leaf_index, const AxisRotation &rotation)
    void rotateLeaf (uint petiole_index, uint leaf_index, const AxisRotation &rotation)
     
    void setVegetativeBudState (BudState state)
    void setVegetativeBudState (BudState state)
     
    void setVegetativeBudState (BudState state, uint petiole_index, uint bud_index)
    void setVegetativeBudState (BudState state, uint petiole_index, uint bud_index)
     
    void setVegetativeBudState (BudState state, VegetativeBud &vbud)
    void setVegetativeBudState (BudState state, VegetativeBud &vbud)
     
    void setFloralBudState (BudState state)
    void setFloralBudState (BudState state)
     
    void setFloralBudState (BudState state, uint petiole_index, uint bud_index)
    void setFloralBudState (BudState state, uint petiole_index, uint bud_index)
     
    void setFloralBudState (BudState state, FloralBud &fbud)
    void setFloralBudState (BudState state, FloralBud &fbud)
     
    float calculateFruitConstructionCosts (const FloralBud &fbud)
    float calculateFruitConstructionCosts (const FloralBud &fbud)
     
    void removeLeaf ()
    void removeLeaf ()
     
    - +

    Static Public Member Functions

    static helios::vec3 getAxisVector (float stem_fraction, const std::vector< helios::vec3 > &axis_vertices)
    static helios::vec3 getAxisVector (float stem_fraction, const std::vector< helios::vec3 > &axis_vertices)
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    float phytomer_carbohydrate_cost_molC = 0
    float phytomer_carbohydrate_cost_molC = 0
     
    std::vector< std::vector< helios::vec3 > > petiole_vertices
    std::vector< std::vector< helios::vec3 > > petiole_vertices
     Coordinates of internode tube segments. Index is tube segment within internode.
     
    std::vector< std::vector< helios::vec3 > > leaf_bases
    std::vector< std::vector< helios::vec3 > > leaf_bases
     
    float internode_pitch
    float internode_pitch
     
    float internode_phyllotactic_angle
    float internode_phyllotactic_angle
     
    std::vector< std::vector< float > > petiole_radii
    std::vector< std::vector< float > > petiole_radii
     
    std::vector< float > petiole_length
    std::vector< float > petiole_length
     
    float petiole_pitch
    float petiole_pitch
     
    float petiole_curvature
    float petiole_curvature
     
    std::vector< std::vector< float > > leaf_size_max
    std::vector< std::vector< float > > leaf_size_max
     
    std::vector< std::vector< AxisRotation > > leaf_rotation
    std::vector< std::vector< AxisRotation > > leaf_rotation
     
    std::vector< helios::RGBcolor > internode_colors
    std::vector< helios::RGBcolor > internode_colors
     
    std::vector< helios::RGBcolor > petiole_colors
    std::vector< helios::RGBcolor > petiole_colors
     
    std::vector< std::vector< uint > > petiole_objIDs
    std::vector< std::vector< uint > > petiole_objIDs
     
    std::vector< std::vector< uint > > leaf_objIDs
    std::vector< std::vector< uint > > leaf_objIDs
     
    PhytomerParameters phytomer_parameters
    PhytomerParameters phytomer_parameters
     
    uint rank
    uint rank
     
    helios::int3 shoot_index
    helios::int3 shoot_index
     .x = index of phytomer along shoot, .y = current number of phytomers on parent shoot, .z = maximum number of phytomers on parent shoot
     
    uint plantID
    uint plantID
     
    uint parent_shoot_ID
    uint parent_shoot_ID
     
    Shoot * parent_shoot_ptr
    Shoot * parent_shoot_ptr
     
    float age = 0
    float age = 0
     Time since the phytomer was created.
     
    bool isdormant = false
    bool isdormant = false
     
    float current_internode_scale_factor = 1
    float current_internode_scale_factor = 1
     
    float current_leaf_scale_factor = 1
    float current_leaf_scale_factor = 1
     
    float downstream_leaf_area = 0
    float downstream_leaf_area = 0
     
    std::vector< std::vector< VegetativeBud > > axillary_vegetative_buds
    std::vector< std::vector< VegetativeBud > > axillary_vegetative_buds
     
    std::vector< std::vector< FloralBud > > floral_buds
    std::vector< std::vector< FloralBud > > floral_buds
     
    float internode_radius_initial
    float internode_radius_initial
     
    float internode_radius_max
    float internode_radius_max
     
    float internode_length_max
    float internode_length_max
     
    bool build_context_geometry_petiole = true
    bool build_context_geometry_petiole = true
     
    bool build_context_geometry_peduncle = true
    bool build_context_geometry_peduncle = true
     
    - + - +

    Friends

    struct Shoot
    struct Shoot
     
    class PlantArchitecture
    class PlantArchitecture
     

    Detailed Description

    @@ -259,91 +271,72 @@

    Phytomer::Phytomer ( - const PhytomerParameters &  - params, + const PhytomerParameters & params, - Shoot *  - parent_shoot, + Shoot * parent_shoot, - uint  - phytomer_index, + uint phytomer_index, - const helios::vec3 &  - parent_internode_axis, + const helios::vec3 & parent_internode_axis, - const helios::vec3 &  - parent_petiole_axis, + const helios::vec3 & parent_petiole_axis, - helios::vec3  - internode_base_origin, + helios::vec3 internode_base_origin, - const AxisRotation &  - shoot_base_rotation, + const AxisRotation & shoot_base_rotation, - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - uint  - rank, + uint rank, - PlantArchitecture *  - plantarchitecture_ptr, + PlantArchitecture * plantarchitecture_ptr, - helios::Context *  - context_ptr  - - - - ) - + helios::Context * context_ptr )

    @@ -362,7 +355,7 @@

    float Phytomer::calculateDownstreamLeafArea ( - ) + ) const @@ -381,8 +374,7 @@

    float Phytomer::calculateFruitConstructionCosts ( - const FloralBud &  - fbud) + const FloralBud & fbud) @@ -404,19 +396,12 @@

    helios::vec3 Phytomer::getAxisVector ( - float  - stem_fraction, + float stem_fraction, - const std::vector< helios::vec3 > &  - axis_vertices  - - - - ) - + const std::vector< helios::vec3 > & axis_vertices ) @@ -439,8 +424,7 @@

    helios::vec3 Phytomer::getInternodeAxisVector ( - float  - stem_fraction) + float stem_fraction) const @@ -459,7 +443,7 @@

    float Phytomer::getInternodeLength ( - ) + ) const @@ -478,7 +462,7 @@

    std::vector< helios::vec3 > Phytomer::getInternodeNodePositions ( - ) + ) const @@ -497,7 +481,7 @@

    std::vector< float > Phytomer::getInternodeNodeRadii ( - ) + ) const @@ -516,7 +500,7 @@

    float Phytomer::getInternodeRadius ( - ) + ) const @@ -535,8 +519,7 @@

    float Phytomer::getInternodeRadius ( - float  - stem_fraction) + float stem_fraction) const @@ -555,7 +538,7 @@

    float Phytomer::getLeafArea ( - ) + ) const @@ -574,19 +557,12 @@

    helios::vec3 Phytomer::getPetioleAxisVector ( - float  - stem_fraction, + float stem_fraction, - uint  - petiole_index  - - - - ) - const + uint petiole_index ) const

    @@ -604,7 +580,7 @@

    float Phytomer::getPetioleLength ( - ) + ) const @@ -623,7 +599,7 @@

    bool Phytomer::hasLeaf ( - ) + ) const @@ -642,7 +618,7 @@

    void Phytomer::removeLeaf ( - ) + ) @@ -661,25 +637,17 @@

    void Phytomer::rotateLeaf ( - uint  - petiole_index, + uint petiole_index, - uint  - leaf_index, + uint leaf_index, - const AxisRotation &  - rotation  - - - - ) - + const AxisRotation & rotation )

    @@ -697,8 +665,7 @@

    void Phytomer::scaleInternodeMaxLength ( - float  - scale_factor) + float scale_factor) @@ -725,8 +692,7 @@

    void Phytomer::scaleLeafPrototypeScale ( - float  - scale_factor) + float scale_factor) @@ -745,8 +711,7 @@

    void Phytomer::setFloralBudState ( - BudState  - state) + BudState state) @@ -765,19 +730,12 @@

    void Phytomer::setFloralBudState ( - BudState  - state, + BudState state, - FloralBud &  - fbud  - - - - ) - + FloralBud & fbud )

    @@ -795,25 +753,17 @@

    void Phytomer::setFloralBudState ( - BudState  - state, + BudState state, - uint  - petiole_index, + uint petiole_index, - uint  - bud_index  - - - - ) - + uint bud_index )

    @@ -831,19 +781,12 @@

    void Phytomer::setInflorescenceScaleFraction ( - FloralBud &  - fbud, + FloralBud & fbud, - float  - inflorescence_scale_factor_fraction  - - - - ) - + float inflorescence_scale_factor_fraction )

    @@ -861,19 +804,12 @@

    void Phytomer::setInternodeLengthScaleFraction ( - float  - internode_scale_factor_fraction, + float internode_scale_factor_fraction, - bool  - update_context_geometry  - - - - ) - + bool update_context_geometry )

    @@ -891,8 +827,7 @@

    void Phytomer::setInternodeMaxLength ( - float  - internode_length_max_new) + float internode_length_max_new) @@ -919,8 +854,7 @@

    void Phytomer::setInternodeMaxRadius ( - float  - internode_radius_max_new) + float internode_radius_max_new) @@ -947,8 +881,7 @@

    void Phytomer::setLeafPrototypeScale ( - float  - leaf_prototype_scale) + float leaf_prototype_scale) @@ -975,8 +908,7 @@

    void Phytomer::setLeafScaleFraction ( - float  - leaf_scale_factor_fraction) + float leaf_scale_factor_fraction) @@ -1003,8 +935,7 @@

    void Phytomer::setPetioleBase ( - const helios::vec3 &  - base_position) + const helios::vec3 & base_position) @@ -1023,8 +954,7 @@

    void Phytomer::setVegetativeBudState ( - BudState  - state) + BudState state) @@ -1043,25 +973,17 @@

    void Phytomer::setVegetativeBudState ( - BudState  - state, + BudState state, - uint  - petiole_index, + uint petiole_index, - uint  - bud_index  - - - - ) - + uint bud_index )

    @@ -1079,19 +1001,12 @@

    void Phytomer::setVegetativeBudState ( - BudState  - state, + BudState state, - VegetativeBud &  - vbud  - - - - ) - + VegetativeBud & vbud )

    @@ -1100,7 +1015,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ PlantArchitecture

    @@ -1692,7 +1607,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_phytomer_parameters.html b/doc/html/struct_phytomer_parameters.html index 3055f3c15..2e693218f 100644 --- a/doc/html/struct_phytomer_parameters.html +++ b/doc/html/struct_phytomer_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    -Data Structures | Public Member Functions | Data Fields | Friends
    @@ -96,37 +107,37 @@ - + - +

    Public Member Functions

     PhytomerParameters ()
     PhytomerParameters ()
     Default constructor - does not set random number generator.
     
     PhytomerParameters (std::minstd_rand0 *generator)
     PhytomerParameters (std::minstd_rand0 *generator)
     Constructor - sets random number generator.
     
    - + - + - + - + - + - + - +

    Data Fields

    InternodeParameters internode
    InternodeParameters internode
     
    PetioleParameters petiole
    PetioleParameters petiole
     
    LeafParameters leaf
    LeafParameters leaf
     
    PeduncleParameters peduncle
    PeduncleParameters peduncle
     
    InflorescenceParameters inflorescence
    InflorescenceParameters inflorescence
     
    void(* phytomer_creation_function )(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age) = nullptr
    void(* phytomer_creation_function )(std::shared_ptr< Phytomer > phytomer_ptr, uint shoot_node_index, uint parent_shoot_node_index, uint shoot_max_nodes, float plant_age) = nullptr
     
    void(* phytomer_callback_function )(std::shared_ptr< Phytomer > phytomer_ptr) = nullptr
    void(* phytomer_callback_function )(std::shared_ptr< Phytomer > phytomer_ptr) = nullptr
     
    - + - + - +

    Friends

    class PlantArchitecture
    class PlantArchitecture
     
    struct Phytomer
    struct Phytomer
     
    struct Shoot
    struct Shoot
     

    Detailed Description

    @@ -142,7 +153,7 @@

    PhytomerParameters::PhytomerParameters ( - ) + ) @@ -166,8 +177,7 @@

    PhytomerParameters::PhytomerParameters ( - std::minstd_rand0 *  - generator) + std::minstd_rand0 * generator) @@ -184,7 +194,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ Phytomer

    @@ -393,7 +403,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_plant_instance.html b/doc/html/struct_plant_instance.html index 13d1df08a..cac30c78d 100644 --- a/doc/html/struct_plant_instance.html +++ b/doc/html/struct_plant_instance.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,40 +106,40 @@ - +

    Public Member Functions

     PlantInstance (const helios::vec3 &a_base_position, float a_current_age, helios::Context *a_context_ptr)
     PlantInstance (const helios::vec3 &a_base_position, float a_current_age, helios::Context *a_context_ptr)
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    std::vector< std::shared_ptr< Shoot > > shoot_tree
    std::vector< std::shared_ptr< Shoot > > shoot_tree
     
    helios::vec3 base_position
    helios::vec3 base_position
     
    float current_age
    float current_age
     
    float time_since_dormancy = 0
    float time_since_dormancy = 0
     
    helios::Context * context_ptr
    helios::Context * context_ptr
     
    std::pair< std::string, float > epicormic_shoot_probability_perlength_per_day
    std::pair< std::string, float > epicormic_shoot_probability_perlength_per_day
     
    float dd_to_dormancy_break = 0
    float dd_to_dormancy_break = 0
     
    float dd_to_flower_initiation = 0
    float dd_to_flower_initiation = 0
     
    float dd_to_flower_opening = 0
    float dd_to_flower_opening = 0
     
    float dd_to_fruit_set = 0
    float dd_to_fruit_set = 0
     
    float dd_to_fruit_maturity = 0
    float dd_to_fruit_maturity = 0
     
    float dd_to_dormancy = 0
    float dd_to_dormancy = 0
     
    float max_leaf_lifespan = 1e6
    float max_leaf_lifespan = 1e6
     
    bool is_evergreen = false
    bool is_evergreen = false
     
    float max_age = 999
    float max_age = 999
     

    Detailed Description

    @@ -146,25 +158,17 @@

    PlantInstance::PlantInstance ( - const helios::vec3 &  - a_base_position, + const helios::vec3 & a_base_position, - float  - a_current_age, + float a_current_age, - helios::Context *  - a_context_ptr  - - - - ) - + helios::Context * a_context_ptr ) @@ -425,7 +429,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_radiation_band.html b/doc/html/struct_radiation_band.html index 511547130..66c5aab5f 100644 --- a/doc/html/struct_radiation_band.html +++ b/doc/html/struct_radiation_band.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,55 +105,55 @@

    Properties defining a radiation band. - More...

    + More...

    #include <RadiationModel.h>

    - +

    Public Member Functions

     RadiationBand (std::string a_label, size_t directRayCount_default, size_t diffuseRayCount_default, float diffuseFlux_default, uint scatteringDepth_default, float minScatterEnergy_default)
     RadiationBand (std::string a_label, size_t directRayCount_default, size_t diffuseRayCount_default, float diffuseFlux_default, uint scatteringDepth_default, float minScatterEnergy_default)
     Constructor.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    std::string label
    std::string label
     Label for band.
     
    size_t directRayCount
    size_t directRayCount
     Number of direct rays launched per element.
     
    size_t diffuseRayCount
    size_t diffuseRayCount
     Number of diffuse rays launched per element.
     
    float diffuseFlux
    float diffuseFlux
     Diffuse component of radiation flux integrated over wave band.
     
    float diffuseExtinction
    float diffuseExtinction
     Distribution coefficient of ambient diffuse radiation for wave band.
     
    helios::vec3 diffusePeakDir
    helios::vec3 diffusePeakDir
     Direction of peak in ambient diffuse radiation.
     
    float diffuseDistNorm
    float diffuseDistNorm
     Diffuse distribution normalization factor.
     
    std::vector< helios::vec2 > diffuse_spectrum
    std::vector< helios::vec2 > diffuse_spectrum
     Spectral distribution of diffuse radiation flux for wave band.
     
    uint scatteringDepth
    uint scatteringDepth
     Scattering depth for wave band.
     
    float minScatterEnergy
    float minScatterEnergy
     Minimum energy for scattering for wave band.
     
    bool emissionFlag
    bool emissionFlag
     Flag that determines if emission calculations are performed for wave band.
     
    helios::vec2 wavebandBounds
    helios::vec2 wavebandBounds
     Waveband range of band.
     
    bool radiativepropertiesinitialized
    bool radiativepropertiesinitialized
     Flag to indicate whether radiative bands have been initialized for this band.
     
    @@ -162,43 +174,32 @@

    RadiationBand::RadiationBand ( - std::string  - a_label, + std::string a_label, - size_t  - directRayCount_default, + size_t directRayCount_default, - size_t  - diffuseRayCount_default, + size_t diffuseRayCount_default, - float  - diffuseFlux_default, + float diffuseFlux_default, - uint  - scatteringDepth_default, + uint scatteringDepth_default, - float  - minScatterEnergy_default  - - - - ) - + float minScatterEnergy_default ) @@ -455,7 +456,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_radiation_camera.html b/doc/html/struct_radiation_camera.html index 2eb4f3564..b0849bcc6 100644 --- a/doc/html/struct_radiation_camera.html +++ b/doc/html/struct_radiation_camera.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,44 +105,44 @@

    Data object for a radiation camera. - More...

    + More...

    #include <RadiationModel.h>

    - +

    Public Member Functions

     RadiationCamera (std::string initlabel, const std::vector< std::string > &band_label, const helios::vec3 &initposition, const helios::vec3 &initlookat, const helios::int2 &initresolution, float initlens_diameter, float initfocal_length, float intitHFOV_degrees, float initFOV_aspect_ratio, uint initantialiasing_samples)
     RadiationCamera (std::string initlabel, const std::vector< std::string > &band_label, const helios::vec3 &initposition, const helios::vec3 &initlookat, const helios::int2 &initresolution, float initlens_diameter, float initfocal_length, float intitHFOV_degrees, float initFOV_aspect_ratio, uint initantialiasing_samples)
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    std::string label
    std::string label
     
    helios::vec3 position
    helios::vec3 position
     
    helios::vec3 lookat
    helios::vec3 lookat
     
    float lens_diameter
    float lens_diameter
     
    helios::int2 resolution
    helios::int2 resolution
     
    float focal_length
    float focal_length
     
    float HFOV_degrees
    float HFOV_degrees
     
    float FOV_aspect_ratio
    float FOV_aspect_ratio
     
    uint antialiasing_samples
    uint antialiasing_samples
     
    std::vector< std::string > band_labels
    std::vector< std::string > band_labels
     
    std::map< std::string, std::string > band_spectral_response
    std::map< std::string, std::string > band_spectral_response
     
    std::map< std::string, std::vector< float > > pixel_data
    std::map< std::string, std::vector< float > > pixel_data
     
    std::vector< uint > pixel_label_UUID
    std::vector< uint > pixel_label_UUID
     
    std::vector< float > pixel_depth
    std::vector< float > pixel_depth
     

    Detailed Description

    @@ -150,67 +162,52 @@

    RadiationCamera::RadiationCamera ( - std::string  - initlabel, + std::string initlabel, - const std::vector< std::string > &  - band_label, + const std::vector< std::string > & band_label, - const helios::vec3 &  - initposition, + const helios::vec3 & initposition, - const helios::vec3 &  - initlookat, + const helios::vec3 & initlookat, - const helios::int2 &  - initresolution, + const helios::int2 & initresolution, - float  - initlens_diameter, + float initlens_diameter, - float  - initfocal_length, + float initfocal_length, - float  - intitHFOV_degrees, + float intitHFOV_degrees, - float  - initFOV_aspect_ratio, + float initFOV_aspect_ratio, - uint  - initantialiasing_samples  - - - - ) - + uint initantialiasing_samples ) @@ -455,7 +452,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_radiation_source.html b/doc/html/struct_radiation_source.html index ed2e0ab21..1c430e480 100644 --- a/doc/html/struct_radiation_source.html +++ b/doc/html/struct_radiation_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,54 +105,54 @@

    Radiation source data object. - More...

    + More...

    #include <RadiationModel.h>

    - + - + - + - + - +

    Public Member Functions

     RadiationSource (const helios::vec3 &position)
     RadiationSource (const helios::vec3 &position)
     Constructor for collimated radiation source.
     
     RadiationSource (const helios::vec3 &position, float width)
     RadiationSource (const helios::vec3 &position, float width)
     Constructor for spherical radiation source.
     
     RadiationSource (const helios::vec3 &position, float position_scaling_factor, float width, float flux_scaling_factor)
     RadiationSource (const helios::vec3 &position, float position_scaling_factor, float width, float flux_scaling_factor)
     Constructor for sun sphere radiation source.
     
     RadiationSource (const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
     RadiationSource (const helios::vec3 &position, const helios::vec2 &size, const helios::vec3 &rotation)
     Constructor for rectangular radiation source.
     
     RadiationSource (const helios::vec3 &position, float width, const helios::vec3 &rotation)
     RadiationSource (const helios::vec3 &position, float width, const helios::vec3 &rotation)
     Constructor for disk radiation source.
     
    - + - + - + - + - + - + - + - + - +

    Data Fields

    helios::vec3 source_position
    helios::vec3 source_position
     Positions of radiation source.
     
    float source_position_scaling_factor
    float source_position_scaling_factor
     Source position factors used to scale position in case of a sun sphere source.
     
    std::vector< helios::vec2 > source_spectrum
    std::vector< helios::vec2 > source_spectrum
     Spectral distribution of radiation source. Each element of the vector is a wavelength band, where .x is the wavelength in nm and .y is the spectral flux in W/m^2/nm.
     
    std::string source_spectrum_label = "none"
    std::string source_spectrum_label = "none"
     
    helios::vec2 source_width
    helios::vec2 source_width
     Widths for each radiation source (N/A for collimated sources)
     
    helios::vec3 source_rotation
    helios::vec3 source_rotation
     Rotation (rx,ry,rz) for radiation source (area sources only)
     
    float source_flux_scaling_factor
    float source_flux_scaling_factor
     Source flux factors used to scale flux in case of a sun sphere source.
     
    RadiationSourceType source_type
    RadiationSourceType source_type
     Types of all radiation sources.
     
    std::map< std::string, float > source_fluxes
    std::map< std::string, float > source_fluxes
     Fluxes of radiation source for all bands.
     
    @@ -161,8 +173,7 @@

    RadiationSource::RadiationSource ( - const helios::vec3 &  - position) + const helios::vec3 & position) @@ -191,19 +202,12 @@

    RadiationSource::RadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - float  - width  - - - - ) - + float width ) @@ -231,31 +235,22 @@

    RadiationSource::RadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - float  - position_scaling_factor, + float position_scaling_factor, - float  - width, + float width, - float  - flux_scaling_factor  - - - - ) - + float flux_scaling_factor ) @@ -283,25 +278,17 @@

    RadiationSource::RadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - const helios::vec2 &  - size, + const helios::vec2 & size, - const helios::vec3 &  - rotation  - - - - ) - + const helios::vec3 & rotation ) @@ -329,25 +316,17 @@

    RadiationSource::RadiationSource ( - const helios::vec3 &  - position, + const helios::vec3 & position, - float  - width, + float width, - const helios::vec3 &  - rotation  - - - - ) - + const helios::vec3 & rotation ) @@ -530,7 +509,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_random_parameter__float.html b/doc/html/struct_random_parameter__float.html index 6cc1d78fe..27addcb28 100644 --- a/doc/html/struct_random_parameter__float.html +++ b/doc/html/struct_random_parameter__float.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,37 +106,37 @@ - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     RandomParameter_float ()
     RandomParameter_float ()
     Constructor initializing to a constant default value of 0.
     
     RandomParameter_float (float val)
     RandomParameter_float (float val)
     Constructor initializing to a constant value.
     
     RandomParameter_float (std::minstd_rand0 *rand_generator)
     RandomParameter_float (std::minstd_rand0 *rand_generator)
     Constructor initializing the random number generator.
     
    void initialize (float a_val, std::minstd_rand0 *rand_generator)
    void initialize (float a_val, std::minstd_rand0 *rand_generator)
     
    void initialize (std::minstd_rand0 *rand_generator)
    void initialize (std::minstd_rand0 *rand_generator)
     
    RandomParameter_float & operator= (float a)
    RandomParameter_float & operator= (float a)
     
    void uniformDistribution (float minval, float maxval)
    void uniformDistribution (float minval, float maxval)
     
    void normalDistribution (float mean, float std_dev)
    void normalDistribution (float mean, float std_dev)
     
    void weibullDistribution (float shape, float scale)
    void weibullDistribution (float shape, float scale)
     
    float val ()
    float val ()
     
    float resample ()
    float resample ()
     
    - + - +

    Data Fields

    std::string distribution
    std::string distribution
     
    std::vector< float > distribution_parameters
    std::vector< float > distribution_parameters
     

    Detailed Description

    @@ -143,7 +155,7 @@

    RandomParameter_float::RandomParameter_float ( - ) + ) @@ -173,8 +185,7 @@

    RandomParameter_float::RandomParameter_float ( - float  - val) + float val) @@ -204,8 +215,7 @@

    RandomParameter_float::RandomParameter_float ( - std::minstd_rand0 *  - rand_generator) + std::minstd_rand0 * rand_generator) @@ -241,19 +251,12 @@

    void RandomParameter_float::initialize ( - float  - a_val, + float a_val, - std::minstd_rand0 *  - rand_generator  - - - - ) - + std::minstd_rand0 * rand_generator ) @@ -279,8 +282,7 @@

    void RandomParameter_float::initialize ( - std::minstd_rand0 *  - rand_generator) + std::minstd_rand0 * rand_generator) @@ -307,19 +309,12 @@

    void RandomParameter_float::normalDistribution ( - float  - mean, + float mean, - float  - std_dev  - - - - ) - + float std_dev ) @@ -345,8 +340,7 @@

    RandomParameter_float & RandomParameter_float::operator= ( - float  - a) + float a) @@ -373,7 +367,7 @@

    float RandomParameter_float::resample ( - ) + ) @@ -400,19 +394,12 @@

    void RandomParameter_float::uniformDistribution ( - float  - minval, + float minval, - float  - maxval  - - - - ) - + float maxval ) @@ -438,7 +425,7 @@

    float RandomParameter_float::val ( - ) + ) @@ -465,19 +452,12 @@

    void RandomParameter_float::weibullDistribution ( - float  - shape, + float shape, - float  - scale  - - - - ) - + float scale ) @@ -530,7 +510,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_random_parameter__int.html b/doc/html/struct_random_parameter__int.html index c592d8f08..a0a502f17 100644 --- a/doc/html/struct_random_parameter__int.html +++ b/doc/html/struct_random_parameter__int.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions
    @@ -93,19 +105,19 @@ - + - + - + - + - + - + - +

    Public Member Functions

    void initialize (int a_val, std::minstd_rand0 *rand_generator)
    void initialize (int a_val, std::minstd_rand0 *rand_generator)
     
    void initialize (std::minstd_rand0 *rand_generator)
    void initialize (std::minstd_rand0 *rand_generator)
     
    RandomParameter_int & operator= (int a)
    RandomParameter_int & operator= (int a)
     
    void uniformDistribution (int minval, int maxval)
    void uniformDistribution (int minval, int maxval)
     
    void discreteValues (const std::vector< int > &values)
    void discreteValues (const std::vector< int > &values)
     
    int val ()
    int val ()
     
    int resample ()
    int resample ()
     

    Detailed Description

    @@ -124,7 +136,7 @@

    RandomParameter_int::RandomParameter_int ( - ) + ) @@ -152,8 +164,7 @@

    void RandomParameter_int::discreteValues ( - const std::vector< int > &  - values) + const std::vector< int > & values) @@ -180,19 +191,12 @@

    void RandomParameter_int::initialize ( - int  - a_val, + int a_val, - std::minstd_rand0 *  - rand_generator  - - - - ) - + std::minstd_rand0 * rand_generator ) @@ -218,8 +222,7 @@

    void RandomParameter_int::initialize ( - std::minstd_rand0 *  - rand_generator) + std::minstd_rand0 * rand_generator) @@ -246,8 +249,7 @@

    RandomParameter_int & RandomParameter_int::operator= ( - int  - a) + int a) @@ -274,7 +276,7 @@

    int RandomParameter_int::resample ( - ) + ) @@ -301,19 +303,12 @@

    void RandomParameter_int::uniformDistribution ( - int  - minval, + int minval, - int  - maxval  - - - - ) - + int maxval ) @@ -339,7 +334,7 @@

    int RandomParameter_int::val ( - ) + ) @@ -360,7 +355,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_scan_metadata.html b/doc/html/struct_scan_metadata.html index 6b47a4751..a2fa744b2 100644 --- a/doc/html/struct_scan_metadata.html +++ b/doc/html/struct_scan_metadata.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,65 +105,65 @@

    Structure containing metadata for a terrestrial scan. - More...

    + More...

    #include <LiDAR.h>

    - + - + - + - +

    Public Member Functions

     ScanMetadata ()
     ScanMetadata ()
     Default LiDAR scan data structure.
     
     ScanMetadata (const helios::vec3 &a_origin, uint a_Ntheta, float a_thetaMin, float a_thetaMax, uint a_Nphi, float a_phiMin, float a_phiMax, float a_exitDiameter, float a_beamDivergence, const std::vector< std::string > &a_columnFormat)
     ScanMetadata (const helios::vec3 &a_origin, uint a_Ntheta, float a_thetaMin, float a_thetaMax, uint a_Nphi, float a_phiMin, float a_phiMax, float a_exitDiameter, float a_beamDivergence, const std::vector< std::string > &a_columnFormat)
     Create a LiDAR scan data structure.
     
    helios::SphericalCoord rc2direction (uint row, uint column) const
    helios::SphericalCoord rc2direction (uint row, uint column) const
     Convert the (row,column) of hit point in a scan to a direction vector.
     
    helios::int2 direction2rc (const helios::SphericalCoord &direction) const
    helios::int2 direction2rc (const helios::SphericalCoord &direction) const
     Convert the scan ray direction into (row,column) table index.
     
    - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    std::string data_file
    std::string data_file
     File containing hit point data.
     
    uint Ntheta
    uint Ntheta
     Number of zenithal angles in scan (rows)
     
    float thetaMin
    float thetaMin
     Minimum zenithal angle of scan in radians

     
    float thetaMax
    float thetaMax
     Maximum zenithal angle of scan in radians.
     
    uint Nphi
    uint Nphi
     Number of azimuthal angles in scan (columns)
     
    float phiMin
    float phiMin
     Minimum azimuthal angle of scan in radians.
     
    float phiMax
    float phiMax
     Maximum azimuthal angle of scan in radians.
     
    helios::vec3 origin
    helios::vec3 origin
     (x,y,z) coordinate of scanner location
     
    float exitDiameter
    float exitDiameter
     Diameter of laser pulse at exit from the scanner.
     
    float beamDivergence
    float beamDivergence
     Divergence angle of the laser beam in radians.
     
    std::vector< std::string > columnFormat
    std::vector< std::string > columnFormat
     Vector of strings specifying the columns of the scan ASCII file for input/output.
     

    Detailed Description

    Structure containing metadata for a terrestrial scan.

    -

    A scan is initialized by providing 1) the origin of the scan (see origin), 2) the number of zenithal scan directions (see Ntheta), 3) the range of zenithal scan angles (see thetaMin, thetaMax), 4) the number of azimuthal scan directions (see Nphi), 5) the range of azimuthal scan angles (see phiMin, phiMax). This creates a grid of Ntheta x Nphi scan points which are all initialized as misses. Points are set as hits using the addHitPoint() function. There are various functions to query the scan data.

    +

    A scan is initialized by providing 1) the origin of the scan (see origin), 2) the number of zenithal scan directions (see Ntheta), 3) the range of zenithal scan angles (see thetaMin, thetaMax), 4) the number of azimuthal scan directions (see Nphi), 5) the range of azimuthal scan angles (see phiMin, phiMax). This creates a grid of Ntheta x Nphi scan points which are all initialized as misses. Points are set as hits using the addHitPoint() function. There are various functions to query the scan data.

    Definition at line 188 of file LiDAR.h.

    Constructor & Destructor Documentation

    @@ -164,7 +176,7 @@

    ScanMetadata::ScanMetadata ( - ) + ) @@ -185,67 +197,52 @@

    ScanMetadata::ScanMetadata ( - const helios::vec3 &  - a_origin, + const helios::vec3 & a_origin, - uint  - a_Ntheta, + uint a_Ntheta, - float  - a_thetaMin, + float a_thetaMin, - float  - a_thetaMax, + float a_thetaMax, - uint  - a_Nphi, + uint a_Nphi, - float  - a_phiMin, + float a_phiMin, - float  - a_phiMax, + float a_phiMax, - float  - a_exitDiameter, + float a_exitDiameter, - float  - a_beamDivergence, + float a_beamDivergence, - const std::vector< std::string > &  - a_columnFormat  - - - - ) - + const std::vector< std::string > & a_columnFormat )

    @@ -276,8 +273,7 @@

    helios::int2 ScanMetadata::direction2rc ( - const helios::SphericalCoord &  - direction) + const helios::SphericalCoord & direction) const @@ -305,19 +301,12 @@

    helios::SphericalCoord ScanMetadata::rc2direction ( - uint  - row, + uint row, - uint  - column  - - - - ) - const + uint column ) const

    @@ -549,7 +538,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_shader.html b/doc/html/struct_shader.html index 9355d5b37..aa711c6f6 100644 --- a/doc/html/struct_shader.html +++ b/doc/html/struct_shader.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,79 +105,79 @@

    OpenGL Shader data structure. - More...

    + More...

    #include <Visualizer.h>

    - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

    void disableTextures () const
    void disableTextures () const
     Disable texture maps and color fragments by interpolating vertex colors.
     
    void setTextureMap (const char *texture_file, uint &textureID, helios::int2 &texture_size)
    void setTextureMap (const char *texture_file, uint &textureID, helios::int2 &texture_size)
     Color fragments using an RGB texture map.
     
    void enableTextureMaps () const
    void enableTextureMaps () const
     Enable texture maps and color fragments using an RGB texture map.
     
    void setTextureMask (const Glyph *glyph, uint &textureID)
    void setTextureMask (const Glyph *glyph, uint &textureID)
     Set fragment opacity using a Glyph (red channel)
     
    void setTextureMask (const char *texture_file, uint &textureID, helios::int2 &texture_size)
    void setTextureMask (const char *texture_file, uint &textureID, helios::int2 &texture_size)
     Set fragment opacity using a texture map file (red channel)
     
    void enableTextureMasks () const
    void enableTextureMasks () const
     Enable texture masks and color fragments by interpolating vertex colors.
     
    void setTransformationMatrix (const glm::mat4 &matrix) const
    void setTransformationMatrix (const glm::mat4 &matrix) const
     Set the shader transformation matrix, i.e., the Affine transformation applied to all vertices.
     
    void setDepthBiasMatrix (const glm::mat4 &matrix) const
    void setDepthBiasMatrix (const glm::mat4 &matrix) const
     Set the depth bias matrix for shadows.
     
    void setLightDirection (const helios::vec3 &direction) const
    void setLightDirection (const helios::vec3 &direction) const
     Set the direction of the light (sun)
     
    void setLightingModel (uint lightingmodel) const
    void setLightingModel (uint lightingmodel) const
     Set the lighting model.
     
    void setLightIntensity (float lightintensity) const
    void setLightIntensity (float lightintensity) const
     Set the intensity of the light source.
     
    void useShader () const
    void useShader () const
     Set shader as current.
     
    void initialize (const char *vertex_shader_file, const char *fragment_shader_file)
    void initialize (const char *vertex_shader_file, const char *fragment_shader_file)
     Initialize the shader.
     
    - + - + - + - + - + - + - + - + - + - +

    Data Fields

    uint shaderID
    uint shaderID
     
    uint textureUniform
    uint textureUniform
     
    uint shadowmapUniform
    uint shadowmapUniform
     
    uint transformMatrixUniform
    uint transformMatrixUniform
     
    uint depthBiasUniform
    uint depthBiasUniform
     
    uint lightDirectionUniform
    uint lightDirectionUniform
     
    uint lightingModelUniform
    uint lightingModelUniform
     
    uint RboundUniform
    uint RboundUniform
     
    float lightIntensityUniform
    float lightIntensityUniform
     
    uint VertexArrayID
    uint VertexArrayID
     

    Detailed Description

    OpenGL Shader data structure.

    -

    Definition at line 80 of file Visualizer.h.

    +

    Definition at line 90 of file Visualizer.h.

    Constructor & Destructor Documentation

    ◆ ~Shader()

    @@ -176,14 +188,13 @@

    Shader::~Shader ( - void  - ) + void )

    -

    Definition at line 4071 of file Visualizer.cpp.

    +

    Definition at line 4082 of file Visualizer.cpp.

    @@ -197,7 +208,7 @@

    void Shader::disableTextures ( - ) + ) const @@ -205,7 +216,7 @@

    Definition at line 4076 of file Visualizer.cpp.

    +

    Definition at line 4087 of file Visualizer.cpp.

    @@ -218,7 +229,7 @@

    void Shader::enableTextureMaps ( - ) + ) const @@ -226,7 +237,7 @@

    Definition at line 4160 of file Visualizer.cpp.

    +

    Definition at line 4171 of file Visualizer.cpp.

    @@ -239,7 +250,7 @@

    void Shader::enableTextureMasks ( - ) + ) const @@ -247,7 +258,7 @@

    Definition at line 4280 of file Visualizer.cpp.

    +

    Definition at line 4291 of file Visualizer.cpp.

    @@ -260,19 +271,12 @@

    void Shader::initialize ( - const char *  - vertex_shader_file, + const char * vertex_shader_file, - const char *  - fragment_shader_file  - - - - ) - + const char * fragment_shader_file )

    @@ -286,7 +290,7 @@

    Definition at line 3920 of file Visualizer.cpp.

    +

    Definition at line 3931 of file Visualizer.cpp.

    @@ -299,8 +303,7 @@

    void Shader::setDepthBiasMatrix ( - const glm::mat4 &  - matrix) + const glm::mat4 & matrix) const @@ -308,7 +311,7 @@

    Definition at line 4299 of file Visualizer.cpp.

    +

    Definition at line 4310 of file Visualizer.cpp.

    @@ -321,8 +324,7 @@

    void Shader::setLightDirection ( - const helios::vec3 &  - direction) + const helios::vec3 & direction) const @@ -330,7 +332,7 @@

    Definition at line 4303 of file Visualizer.cpp.

    +

    Definition at line 4314 of file Visualizer.cpp.

    @@ -343,8 +345,7 @@

    void Shader::setLightingModel ( - uint  - lightingmodel) + uint lightingmodel) const @@ -352,7 +353,7 @@

    Definition at line 4307 of file Visualizer.cpp.

    +

    Definition at line 4318 of file Visualizer.cpp.

    @@ -365,8 +366,7 @@

    void Shader::setLightIntensity ( - float  - lightintensity) + float lightintensity) const @@ -374,7 +374,7 @@

    Definition at line 4311 of file Visualizer.cpp.

    +

    Definition at line 4322 of file Visualizer.cpp.

    @@ -387,25 +387,17 @@

    void Shader::setTextureMap ( - const char *  - texture_file, + const char * texture_file, - uint &  - textureID, + uint & textureID, - helios::int2 &  - texture_size  - - - - ) - + helios::int2 & texture_size )

    @@ -420,7 +412,7 @@

    Definition at line 4081 of file Visualizer.cpp.

    +

    Definition at line 4092 of file Visualizer.cpp.

    @@ -433,25 +425,17 @@

    void Shader::setTextureMask ( - const char *  - texture_file, + const char * texture_file, - uint &  - textureID, + uint & textureID, - helios::int2 &  - texture_size  - - - - ) - + helios::int2 & texture_size )

    @@ -466,7 +450,7 @@

    Definition at line 4220 of file Visualizer.cpp.

    +

    Definition at line 4231 of file Visualizer.cpp.

    @@ -479,19 +463,12 @@

    void Shader::setTextureMask ( - const Glyph *  - glyph, + const Glyph * glyph, - uint &  - textureID  - - - - ) - + uint & textureID )

    @@ -505,7 +482,7 @@

    Definition at line 4176 of file Visualizer.cpp.

    +

    Definition at line 4187 of file Visualizer.cpp.

    @@ -518,8 +495,7 @@

    void Shader::setTransformationMatrix ( - const glm::mat4 &  - matrix) + const glm::mat4 & matrix) const @@ -527,7 +503,7 @@

    Definition at line 4295 of file Visualizer.cpp.

    +

    Definition at line 4306 of file Visualizer.cpp.

    @@ -540,7 +516,7 @@

    void Shader::useShader ( - ) + ) const @@ -548,7 +524,7 @@

    Definition at line 4315 of file Visualizer.cpp.

    +

    Definition at line 4326 of file Visualizer.cpp.

    @@ -565,7 +541,7 @@

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    Definition at line 147 of file Visualizer.h.

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    Definition at line 149 of file Visualizer.h.

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    Definition at line 151 of file Visualizer.h.

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    Definition at line 152 of file Visualizer.h.

    +

    Definition at line 162 of file Visualizer.h.

    @@ -720,7 +696,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_shoot.html b/doc/html/struct_shoot.html index a7610b8b2..df8ed3cdc 100644 --- a/doc/html/struct_shoot.html +++ b/doc/html/struct_shoot.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,111 +106,111 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     Shoot (uint plant_ID, int shoot_ID, int parent_shoot_ID, uint parent_node, uint parent_petiole_index, uint rank, const helios::vec3 &shoot_base_position, const AxisRotation &shoot_base_rotation, uint current_node_number, float internode_length_shoot_initial, ShootParameters &shoot_params, std::string shoot_type_label, PlantArchitecture *plant_architecture_ptr)
     Shoot (uint plant_ID, int shoot_ID, int parent_shoot_ID, uint parent_node, uint parent_petiole_index, uint rank, const helios::vec3 &shoot_base_position, const AxisRotation &shoot_base_rotation, uint current_node_number, float internode_length_shoot_initial, ShootParameters &shoot_params, std::string shoot_type_label, PlantArchitecture *plant_architecture_ptr)
     
    void buildShootPhytomers (float internode_radius, float internode_length, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper)
    void buildShootPhytomers (float internode_radius, float internode_length, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, float radius_taper)
     
    int appendPhytomer (float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters)
    int appendPhytomer (float internode_radius, float internode_length_max, float internode_length_scale_factor_fraction, float leaf_scale_factor_fraction, const PhytomerParameters &phytomer_parameters)
     Append a phytomer at the shoot apex.
     
    std::string sampleChildShootType () const
    std::string sampleChildShootType () const
     Randomly sample the type of a child shoot based on the probabilities defined in the shoot parameters.
     
    bool sampleVegetativeBudBreak (uint node_index) const
    bool sampleVegetativeBudBreak (uint node_index) const
     Randomly sample whether a vegetative bud should break into a new shoot.
     
    uint sampleEpicormicShoot (float dt, std::vector< float > &epicormic_positions_fraction)
    uint sampleEpicormicShoot (float dt, std::vector< float > &epicormic_positions_fraction)
     Randomly sample whether the shoot should produce an epicormic shoot (water sprout) over timestep.
     
    void terminateApicalBud ()
    void terminateApicalBud ()
     
    void terminateAxillaryVegetativeBuds ()
    void terminateAxillaryVegetativeBuds ()
     
    void addTerminalFloralBud ()
    void addTerminalFloralBud ()
     
    float calculateShootInternodeVolume () const
    float calculateShootInternodeVolume () const
     
    float calculateShootLength () const
    float calculateShootLength () const
     
    void updateShootNodes (bool update_context_geometry=true)
    void updateShootNodes (bool update_context_geometry=true)
     Recalculate and apply the shoot's origin position and shift all downstream shoots.
     
    helios::vec3 getShootAxisVector (float shoot_fraction) const
    helios::vec3 getShootAxisVector (float shoot_fraction) const
     
    float sumShootLeafArea (uint start_node_index=0) const
    float sumShootLeafArea (uint start_node_index=0) const
     
    void propagateDownstreamLeafArea (Shoot *shoot, uint node_index, float leaf_area)
    void propagateDownstreamLeafArea (Shoot *shoot, uint node_index, float leaf_area)
     
    void breakDormancy ()
    void breakDormancy ()
     
    void makeDormant ()
    void makeDormant ()
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    uint current_node_number = 0
    uint current_node_number = 0
     
    uint nodes_this_season = 0
    uint nodes_this_season = 0
     
    helios::vec3 base_position
    helios::vec3 base_position
     
    AxisRotation base_rotation
    AxisRotation base_rotation
     
    helios::vec3 radial_outward_axis
    helios::vec3 radial_outward_axis
     
    const int ID
    const int ID
     
    const int parent_shoot_ID
    const int parent_shoot_ID
     
    const uint plantID
    const uint plantID
     
    const uint parent_node_index
    const uint parent_node_index
     
    const uint rank
    const uint rank
     
    const uint parent_petiole_index
    const uint parent_petiole_index
     
    float carbohydrate_pool_molC = 0.01
    float carbohydrate_pool_molC = 0.01
     
    float old_shoot_volume = 0
    float old_shoot_volume = 0
     
    uint days_with_negative_carbon_balance = 0
    uint days_with_negative_carbon_balance = 0
     
    bool isdormant
    bool isdormant
     
    uint dormancy_cycles = 0
    uint dormancy_cycles = 0
     
    bool meristem_is_alive = true
    bool meristem_is_alive = true
     
    float phyllochron_counter = 0
    float phyllochron_counter = 0
     
    float curvature_perturbation = 0
    float curvature_perturbation = 0
     
    float yaw_perturbation = 0
    float yaw_perturbation = 0
     
    float gravitropic_curvature = 0
    float gravitropic_curvature = 0
     
    const float internode_length_max_shoot_initial
    const float internode_length_max_shoot_initial
     
    uint internode_tube_objID = 4294967294
    uint internode_tube_objID = 4294967294
     
    std::vector< std::vector< helios::vec3 > > shoot_internode_vertices
    std::vector< std::vector< helios::vec3 > > shoot_internode_vertices
     
    std::vector< std::vector< float > > shoot_internode_radii
    std::vector< std::vector< float > > shoot_internode_radii
     
    bool build_context_geometry_internode = true
    bool build_context_geometry_internode = true
     
    std::map< int, std::vector< int > > childIDs
    std::map< int, std::vector< int > > childIDs
     
    ShootParameters shoot_parameters
    ShootParameters shoot_parameters
     
    std::string shoot_type_label
    std::string shoot_type_label
     
    std::vector< std::shared_ptr< Phytomer > > phytomers
    std::vector< std::shared_ptr< Phytomer > > phytomers
     
    PlantArchitecture * plantarchitecture_ptr
    PlantArchitecture * plantarchitecture_ptr
     
    helios::Context * context_ptr
    helios::Context * context_ptr
     

    Detailed Description

    @@ -214,85 +226,67 @@

    Shoot::Shoot ( - uint  - plant_ID, + uint plant_ID, - int  - shoot_ID, + int shoot_ID, - int  - parent_shoot_ID, + int parent_shoot_ID, - uint  - parent_node, + uint parent_node, - uint  - parent_petiole_index, + uint parent_petiole_index, - uint  - rank, + uint rank, - const helios::vec3 &  - shoot_base_position, + const helios::vec3 & shoot_base_position, - const AxisRotation &  - shoot_base_rotation, + const AxisRotation & shoot_base_rotation, - uint  - current_node_number, + uint current_node_number, - float  - internode_length_shoot_initial, + float internode_length_shoot_initial, - ShootParameters &  - shoot_params, + ShootParameters & shoot_params, - std::string  - shoot_type_label, + std::string shoot_type_label, - PlantArchitecture *  - plant_architecture_ptr  - - - - ) - + PlantArchitecture * plant_architecture_ptr )

    @@ -311,7 +305,7 @@

    void Shoot::addTerminalFloralBud ( - ) + ) @@ -330,37 +324,27 @@

    int Shoot::appendPhytomer ( - float  - internode_radius, + float internode_radius, - float  - internode_length_max, + float internode_length_max, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - const PhytomerParameters &  - phytomer_parameters  - - - - ) - + const PhytomerParameters & phytomer_parameters )

    @@ -390,7 +374,7 @@

    void Shoot::breakDormancy ( - ) + ) @@ -409,37 +393,27 @@

    void Shoot::buildShootPhytomers ( - float  - internode_radius, + float internode_radius, - float  - internode_length, + float internode_length, - float  - internode_length_scale_factor_fraction, + float internode_length_scale_factor_fraction, - float  - leaf_scale_factor_fraction, + float leaf_scale_factor_fraction, - float  - radius_taper  - - - - ) - + float radius_taper )

    @@ -457,7 +431,7 @@

    float Shoot::calculateShootInternodeVolume ( - ) + ) const @@ -476,7 +450,7 @@

    float Shoot::calculateShootLength ( - ) + ) const @@ -495,8 +469,7 @@

    helios::vec3 Shoot::getShootAxisVector ( - float  - shoot_fraction) + float shoot_fraction) const @@ -515,7 +488,7 @@

    void Shoot::makeDormant ( - ) + ) @@ -534,25 +507,17 @@

    void Shoot::propagateDownstreamLeafArea ( - Shoot *  - shoot, + Shoot * shoot, - uint  - node_index, + uint node_index, - float  - leaf_area  - - - - ) - + float leaf_area )

    @@ -570,7 +535,7 @@

    std::string Shoot::sampleChildShootType ( - ) + ) const @@ -592,19 +557,12 @@

    uint Shoot::sampleEpicormicShoot ( - float  - dt, + float dt, - std::vector< float > &  - epicormic_positions_fraction  - - - - ) - + std::vector< float > & epicormic_positions_fraction )

    @@ -632,8 +590,7 @@

    bool Shoot::sampleVegetativeBudBreak ( - uint  - node_index) + uint node_index) const @@ -661,8 +618,7 @@

    float Shoot::sumShootLeafArea ( - uint  - start_node_index = 0) + uint start_node_index = 0) const @@ -681,7 +637,7 @@

    void Shoot::terminateApicalBud ( - ) + ) @@ -700,7 +656,7 @@

    void Shoot::terminateAxillaryVegetativeBuds ( - ) + ) @@ -719,8 +675,7 @@

    void Shoot::updateShootNodes ( - bool  - update_context_geometry = true) + bool update_context_geometry = true) @@ -1252,7 +1207,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_shoot_parameters.html b/doc/html/struct_shoot_parameters.html index bc5240c90..b0bf6b815 100644 --- a/doc/html/struct_shoot_parameters.html +++ b/doc/html/struct_shoot_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -95,73 +107,73 @@ - + - + - + - +

    Public Member Functions

     ShootParameters ()
     ShootParameters ()
     Default constructor - does not set random number generator.
     
     ShootParameters (std::minstd_rand0 *generator)
     ShootParameters (std::minstd_rand0 *generator)
     Constructor - sets random number generator.
     
    void defineChildShootTypes (const std::vector< std::string > &child_shoot_type_labels, const std::vector< float > &child_shoot_type_probabilities)
    void defineChildShootTypes (const std::vector< std::string > &child_shoot_type_labels, const std::vector< float > &child_shoot_type_probabilities)
     
    ShootParameters & operator= (const ShootParameters &a)
    ShootParameters & operator= (const ShootParameters &a)
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    PhytomerParameters phytomer_parameters
    PhytomerParameters phytomer_parameters
     
    RandomParameter_int max_nodes
    RandomParameter_int max_nodes
     
    RandomParameter_int max_nodes_per_season
    RandomParameter_int max_nodes_per_season
     
    RandomParameter_float girth_area_factor
    RandomParameter_float girth_area_factor
     
    RandomParameter_float insertion_angle_tip
    RandomParameter_float insertion_angle_tip
     
    RandomParameter_float insertion_angle_decay_rate
    RandomParameter_float insertion_angle_decay_rate
     
    RandomParameter_float internode_length_max
    RandomParameter_float internode_length_max
     
    RandomParameter_float internode_length_min
    RandomParameter_float internode_length_min
     
    RandomParameter_float internode_length_decay_rate
    RandomParameter_float internode_length_decay_rate
     
    RandomParameter_float base_roll
    RandomParameter_float base_roll
     
    RandomParameter_float base_yaw
    RandomParameter_float base_yaw
     
    RandomParameter_float gravitropic_curvature
    RandomParameter_float gravitropic_curvature
     
    RandomParameter_float tortuosity
    RandomParameter_float tortuosity
     
    RandomParameter_float phyllochron_min
    RandomParameter_float phyllochron_min
     
    RandomParameter_float elongation_rate
    RandomParameter_float elongation_rate
     
    RandomParameter_float vegetative_bud_break_probability_min
    RandomParameter_float vegetative_bud_break_probability_min
     
    RandomParameter_float vegetative_bud_break_probability_decay_rate
    RandomParameter_float vegetative_bud_break_probability_decay_rate
     
    RandomParameter_int max_terminal_floral_buds
    RandomParameter_int max_terminal_floral_buds
     
    RandomParameter_float flower_bud_break_probability
    RandomParameter_float flower_bud_break_probability
     
    RandomParameter_float fruit_set_probability
    RandomParameter_float fruit_set_probability
     
    RandomParameter_float vegetative_bud_break_time
    RandomParameter_float vegetative_bud_break_time
     
    bool flowers_require_dormancy
    bool flowers_require_dormancy
     
    bool growth_requires_dormancy
    bool growth_requires_dormancy
     
    bool determinate_shoot_growth
    bool determinate_shoot_growth
     
    - + - +

    Friends

    class PlantArchitecture
    class PlantArchitecture
     
    struct Shoot
    struct Shoot
     

    Detailed Description

    @@ -177,7 +189,7 @@

    ShootParameters::ShootParameters ( - ) + ) @@ -201,8 +213,7 @@

    ShootParameters::ShootParameters ( - std::minstd_rand0 *  - generator) + std::minstd_rand0 * generator) @@ -229,19 +240,12 @@

    void ShootParameters::defineChildShootTypes ( - const std::vector< std::string > &  - child_shoot_type_labels, + const std::vector< std::string > & child_shoot_type_labels, - const std::vector< float > &  - child_shoot_type_probabilities  - - - - ) - + const std::vector< float > & child_shoot_type_probabilities )

    @@ -262,8 +266,7 @@

    ShootParameters & ShootParameters::operator= ( - const ShootParameters &  - a) + const ShootParameters & a) @@ -278,7 +281,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ PlantArchitecture

    @@ -720,7 +723,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_shx.html b/doc/html/struct_shx.html index 117752e16..7de360608 100644 --- a/doc/html/struct_shx.html +++ b/doc/html/struct_shx.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,30 +106,30 @@ - + - + - + - +

    Public Member Functions

     Shx (float a, float b)
     Shx (float a, float b)
     
     Shx (float a, float b, float x)
     Shx (float a, float b, float x)
     
     Shx (const Shx &p)
     Shx (const Shx &p)
     
    Shx & operator= (const Shx &p)
    Shx & operator= (const Shx &p)
     
    - + - + - + - + - + - + - +

    Data Fields

    int id
    int id
     
    int trid
    int trid
     
    float r
    float r
     
    float c
    float c
     
    float tr
    float tr
     
    float tc
    float tc
     
    float ro
    float ro
     

    Detailed Description

    @@ -136,7 +148,7 @@

    Shx::Shx ( - ) + ) @@ -163,19 +175,12 @@

    Shx::Shx ( - float  - a, + float a, - float  - b  - - - - ) - + float b ) @@ -201,25 +206,17 @@

    Shx::Shx ( - float  - a, + float a, - float  - b, + float b, - float  - x  - - - - ) - + float x ) @@ -245,8 +242,7 @@

    Shx::Shx ( - const Shx &  - p) + const Shx & p) @@ -274,8 +270,7 @@

    Shx & Shx::operator= ( - const Shx &  - p) + const Shx & p) @@ -409,7 +404,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_sorghum_canopy_parameters.html b/doc/html/struct_sorghum_canopy_parameters.html index 9e2e02eff..248168a52 100644 --- a/doc/html/struct_sorghum_canopy_parameters.html +++ b/doc/html/struct_sorghum_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining Sorghum plant canopy. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,226 +120,220 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     SorghumCanopyParameters ()
     SorghumCanopyParameters ()
     Default constructor.
     
     SorghumCanopyParameters (const pugi::xml_node canopy_node)
     SorghumCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    int sorghum_stage
    int sorghum_stage
     Sorghum categorized into 5 stages; 1 - Three leaf stage, 2 - Five leaf stage, 3 - Panicle initiation and flag leaf emergency, 4 - Booting, and flowering, 5 - Maturity; Input of a value other than 1-5 will output stage 5.
     
    float s1_stem_length
    float s1_stem_length
     Length of the sorghum stem for stage 1.
     
    float s1_stem_radius
    float s1_stem_radius
     Radius of the sorghum stem for stage 1.
     
    float s1_stem_subdivisions
    float s1_stem_subdivisions
     Number of stem radial subdivisions for stage 1.
     
    helios::vec2 s1_leaf_size1
    helios::vec2 s1_leaf_size1
     Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
     
    helios::vec2 s1_leaf_size2
    helios::vec2 s1_leaf_size2
     Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
     
    helios::vec2 s1_leaf_size3
    helios::vec2 s1_leaf_size3
     Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 1.
     
    float s1_leaf1_angle
    float s1_leaf1_angle
     Leaf1 vertical angle of rotation for stage 1.
     
    float s1_leaf2_angle
    float s1_leaf2_angle
     Leaf2 vertical angle of rotation for stage 1.
     
    float s1_leaf3_angle
    float s1_leaf3_angle
     Leaf3 vertical angle of rotation for stage 1.
     
    helios::int2 s1_leaf_subdivisions
    helios::int2 s1_leaf_subdivisions
     Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 1.
     
    std::string s1_leaf_texture_file
    std::string s1_leaf_texture_file
     Texture map for sorghum leaf1 for stage 1.
     
    float s2_stem_length
    float s2_stem_length
     Length of the sorghum stem for stage 2.
     
    float s2_stem_radius
    float s2_stem_radius
     Radius of the sorghum stem for stage 2.
     
    float s2_stem_subdivisions
    float s2_stem_subdivisions
     Number of stem radial subdivisions for stage 2.
     
    helios::vec2 s2_leaf_size1
    helios::vec2 s2_leaf_size1
     Length of leaf1 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
     
    helios::vec2 s2_leaf_size2
    helios::vec2 s2_leaf_size2
     Length of leaf2 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
     
    helios::vec2 s2_leaf_size3
    helios::vec2 s2_leaf_size3
     Length of leaf3 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
     
    helios::vec2 s2_leaf_size4
    helios::vec2 s2_leaf_size4
     Length of leaf4 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
     
    helios::vec2 s2_leaf_size5
    helios::vec2 s2_leaf_size5
     Length of leaf5 in x- (length) and y- (width) directions (prior to rotation) for stage 2.
     
    float s2_leaf1_angle
    float s2_leaf1_angle
     Leaf1 vertical angle of rotation for stage 2.
     
    float s2_leaf2_angle
    float s2_leaf2_angle
     Leaf2 vertical angle of rotation for stage 2.
     
    float s2_leaf3_angle
    float s2_leaf3_angle
     Leaf3 vertical angle of rotation for stage 2.
     
    float s2_leaf4_angle
    float s2_leaf4_angle
     Leaf4 vertical angle of rotation for stage 2.
     
    float s2_leaf5_angle
    float s2_leaf5_angle
     Leaf5 vertical angle of rotation for stage 2.
     
    helios::int2 s2_leaf_subdivisions
    helios::int2 s2_leaf_subdivisions
     Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 2.
     
    std::string s2_leaf_texture_file
    std::string s2_leaf_texture_file
     Texture map for sorghum leaf for stage 2.
     
    float s3_stem_length
    float s3_stem_length
     Length of the sorghum stem for stage 3.
     
    float s3_stem_radius
    float s3_stem_radius
     Radius of the sorghum stem for stage 3.
     
    float s3_stem_subdivisions
    float s3_stem_subdivisions
     Number of stem radial subdivisions for stage 3.
     
    helios::vec2 s3_leaf_size
    helios::vec2 s3_leaf_size
     Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 3.
     
    helios::int2 s3_leaf_subdivisions
    helios::int2 s3_leaf_subdivisions
     Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 3.
     
    int s3_number_of_leaves
    int s3_number_of_leaves
     Number of leaves along the stem for stage 3.
     
    float s3_mean_leaf_angle
    float s3_mean_leaf_angle
     Mean vertical angle of rotation of leaf for stage 3 in degrees; Standard deviation for the leaves is 5 degrees.
     
    std::string s3_leaf_texture_file
    std::string s3_leaf_texture_file
     Texture map for sorghum leaf for stage 3.
     
    float s4_stem_length
    float s4_stem_length
     Length of the sorghum stem for stage 4.
     
    float s4_stem_radius
    float s4_stem_radius
     Radius of the sorghum stem for stage 4.
     
    float s4_stem_subdivisions
    float s4_stem_subdivisions
     Number of stem radial subdivisions for stage 4.
     
    helios::vec2 s4_panicle_size
    helios::vec2 s4_panicle_size
     Size of panicle in x- and y- directions for stage 4.
     
    int s4_panicle_subdivisions
    int s4_panicle_subdivisions
     Number of panicle subdivisions for each grain sphere within a panicle, stage 4.
     
    std::string s4_seed_texture_file
    std::string s4_seed_texture_file
     Texture map of the panicle for stage 4.
     
    helios::vec2 s4_leaf_size
    helios::vec2 s4_leaf_size
     Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 4.
     
    helios::int2 s4_leaf_subdivisions
    helios::int2 s4_leaf_subdivisions
     Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 4.
     
    int s4_number_of_leaves
    int s4_number_of_leaves
     Number of leaves for the sorghum plant, stage 4.
     
    float s4_mean_leaf_angle
    float s4_mean_leaf_angle
     Mean vertical angle of rotation of leaf for stage 4 in degrees; Standard deviation for the angle is 5 degrees.
     
    std::string s4_leaf_texture_file
    std::string s4_leaf_texture_file
     Texture map for sorghum leaf, stage 4.
     
    float s5_stem_length
    float s5_stem_length
     Length of the sorghum stem for stage 5.
     
    float s5_stem_radius
    float s5_stem_radius
     Radius of the sorghum stem for stage 5.
     
    float s5_stem_bend
    float s5_stem_bend
     Bend of the stem from mid-section for stage 5. The distance from the mid-section of the stem to the imaginary perpendicular along the origin. i.e stem bend = 0 outputs a straight stem.
     
    int s5_stem_subdivisions
    int s5_stem_subdivisions
     Number of stem radial subdivisions for stage 5.
     
    helios::vec2 s5_panicle_size
    helios::vec2 s5_panicle_size
     Size of panicle in x- and y- directions for stage 5.
     
    int s5_panicle_subdivisions
    int s5_panicle_subdivisions
     Number of panicle subdivisions for each grain sphere within a panicle, stage 5.
     
    std::string s5_seed_texture_file
    std::string s5_seed_texture_file
     Texture map of the panicle for stage 5.
     
    helios::vec2 s5_leaf_size
    helios::vec2 s5_leaf_size
     Length of leaf in x- (length) and y- (width) directions (prior to rotation) for stage 5.
     
    helios::int2 s5_leaf_subdivisions
    helios::int2 s5_leaf_subdivisions
     Number of sub-division segments of leaf in the x- (length) and y- (width) direction for stage 5.
     
    int s5_number_of_leaves
    int s5_number_of_leaves
     Number of leaves for the sorghum plant, stage 5.
     
    float s5_mean_leaf_angle
    float s5_mean_leaf_angle
     Mean vertical angle of rotation of leaf for stage 5 in degrees; Standard deviation for the angle is 10 degrees.
     
    std::string s5_leaf_texture_file
    std::string s5_leaf_texture_file
     Texture map for sorghum leaf, stage 5.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -345,7 +351,7 @@

    SorghumCanopyParameters::SorghumCanopyParameters ( - ) + ) @@ -366,8 +372,7 @@

    SorghumCanopyParameters::SorghumCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -396,8 +401,7 @@

    void SorghumCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -428,19 +432,12 @@

    void SorghumCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -467,8 +464,7 @@

    void SorghumCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -1592,7 +1588,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_sorghum_canopy_parameters.png b/doc/html/struct_sorghum_canopy_parameters.png index 9df781c67952f1d49ad93047c2e4278e88aefb69..295e6f9816b5c17a2276d711d9edcf8f2e424126 100644 GIT binary patch delta 21 dcmeBT>tdT=$MxXBga7~ko1P6@veDxZ699HD3r_$5 delta 21 dcmeBT>tdT=$93Sqf&c&i2T!`ZVxz|)CIEAz3sV39 diff --git a/doc/html/struct_spherical_crowns_canopy_parameters.html b/doc/html/struct_spherical_crowns_canopy_parameters.html index 322fd8825..399b05b8f 100644 --- a/doc/html/struct_spherical_crowns_canopy_parameters.html +++ b/doc/html/struct_spherical_crowns_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the canopy with spherical crowns. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,75 +120,69 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     SphericalCrownsCanopyParameters ()
     SphericalCrownsCanopyParameters ()
     Default constructor.
     
     SphericalCrownsCanopyParameters (const pugi::xml_node canopy_node)
     SphericalCrownsCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    helios::vec2 leaf_size
    helios::vec2 leaf_size
     Length of leaf in x- and y- directions (prior to rotation)
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves. If left empty, no texture will be used.
     
    helios::RGBcolor leaf_color
    helios::RGBcolor leaf_color
     Leaf color if no texture map file is provided.
     
    std::string leaf_angle_distribution
    std::string leaf_angle_distribution
     Leaf angle distribution - one of "spherical", "uniform", "erectophile", "planophile", "plagiophile", "extremophile".
     
    float leaf_area_density
    float leaf_area_density
     One-sided leaf area density within spherical crowns.
     
    helios::vec3 crown_radius
    helios::vec3 crown_radius
     Radius of the spherical crowns.
     
    std::string canopy_configuration
    std::string canopy_configuration
     Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arranged canopy with non-overlapping crowns (canopy_configuration="random").
     
    helios::vec2 plant_spacing
    helios::vec2 plant_spacing
     Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random' this is the average spacing.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -194,7 +200,7 @@

    SphericalCrownsCanopyParameters::SphericalCrownsCanopyParameters ( - ) + ) @@ -215,8 +221,7 @@

    SphericalCrownsCanopyParameters::SphericalCrownsCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -245,8 +250,7 @@

    void SphericalCrownsCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -277,19 +281,12 @@

    void SphericalCrownsCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -316,8 +313,7 @@

    void SphericalCrownsCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -539,7 +535,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_spherical_crowns_canopy_parameters.png b/doc/html/struct_spherical_crowns_canopy_parameters.png index ffa7153495cb659b40ae5ec31acafbcc66485bb0..65a3ea3bf3fed89559cf17d2c4c5aa1c730656ed 100644 GIT binary patch delta 21 dcmdnTwvTOs9oK^g5B~rEZ+bRt$wrTFOaOki3+n&? delta 21 dcmdnTwvTOs9oK;a2mb&6A3W*uij5xMm;ih$3-15` diff --git a/doc/html/struct_split_grapevine_parameters.html b/doc/html/struct_split_grapevine_parameters.html index 9edf1e234..672d1376d 100644 --- a/doc/html/struct_split_grapevine_parameters.html +++ b/doc/html/struct_split_grapevine_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the grapevine canopy with a split (quad) trellis. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -109,205 +121,193 @@ - + - + - + - + - + - - + + - + - + - - - - - - - - + + - + - + - - - - - -

    Public Member Functions

     SplitGrapevineParameters ()
     SplitGrapevineParameters ()
     Default constructor.
     
     SplitGrapevineParameters (const pugi::xml_node canopy_node)
     SplitGrapevineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
     Default constructor.
     
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float cordon_spacing
    float cordon_spacing
     Spacing between two opposite cordons.
     
    float cordon_spacing_spread
    float cordon_spacing_spread
     Spread value for the cordon spacing. With any new canopy or plant generation, the cordon spacing would be between cordon_spacing - cordon_spacing_spread and cordon_spacing + cordon_spacing_spread.
     
    float shoot_angle_base
    float shoot_angle_base
     Average angle of the shoot at the base (shoot_angle_base=0 points shoots upward; shoot_angle_base=M_PI points shoots downward and makes a Geneva Double Curtain)
     
    float shoot_angle_base_spread
    float shoot_angle_base_spread
     Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle would be between shoot_angle_base - shoot_angle_base_spread and shoot_angle_base + shoot_angle_base_spread.
     
    float shoot_angle_tip
    float shoot_angle_tip
     Average angle of the shoot at the tip (shoot_angle=0 is a completely vertical shoot; shoot_angle=M_PI is a downward-pointing shoot)
     
    float shoot_angle_tip_spread
    float shoot_angle_tip_spread
     Spread value for the base shoot angle. With any new canopy or plant generation, the base shoot angle would be between shoot_angle_tip - shoot_angle_tip_spread and shoot_angle_tip + shoot_angle_tip_spread.
     
    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
     Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is the width at the base of the shoot.
     
    float leaf_width_spread
    float leaf_width_spread
     Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf width would be between leaf_width - leaf_width_spread and leaf_width + leaf_width_spread.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for trunks/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for trunk/cordon/shoot tubes.
     
    int wood_subdivisions_spread
    int wood_subdivisions_spread
     Spread value for the number of wood subdivisions. With any new canopy or plant generation, the maximum number of wood subdivisions would be between wood_subdivisions - wood_subdivisions_spread and wood_subdivisions + wood_subdivisions_spread.
     
    float dead_probability
    float dead_probability
     Probability for a plant to be dead, i.e. without any leaves or grapes.
     
    float missing_plant_probability
    float missing_plant_probability
     Probability for a plant to be missing.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float plant_spacing_spread
    float plant_spacing_spread
     Spread value for the plant spacing. The spacing between adjacent plants along a row would vary between plant_spacing - plant_spacing_spread and plant_spacing + plant_spacing_spread.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float row_spacing_spread
    float row_spacing_spread
     Spread value for the row spacing. This allows to vary the alignment of plants along a row. The spacing between two plants of adjacent rows would be between row_spacing - row_spacing_spread and row_spacing + row_spacing_spread.
     
    float trunk_height
    float trunk_height
     Distance between the ground and top of trunks.
     
    float trunk_height_spread
    float trunk_height_spread
     Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be between trunk_height - trunk_height_spread and trunk_height + trunk_height_spread.
     
    float trunk_radius
    float trunk_radius
     Radius of the trunk at the widest point.
     
    float trunk_radius_spread
    float trunk_radius_spread
     Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be between trunk_radius - trunk_radius_spread and trunk_radius + trunk_radius_spread.
     
    float cordon_length
    float cordon_length
     Length of the cordons. By default, half the plant spacing.
     
    float cordon_length_spread
    float cordon_length_spread
     Spread value for the cordon length. With any new canopy or plant generation, the cordon length would be between cordon_length - cordon_length_spread and cordon_length + cordon_length_spread.
     
    float cordon_height
    float cordon_height
     Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
     
    float cordon_height_spread
    float cordon_height_spread
     Spread value for the cordon height. With any new canopy or plant generation, the cordon height would be between cordon_height - cordon_height_spread and cordon_height + cordon_height_spread.
     
    float cordon_radius
    float cordon_radius
     Radius of cordon branches.
     
    float cordon_radius_spread
    float cordon_radius_spread
     Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would be between cordon_radius - cordon_radius_spread and cordon_radius + cordon_radius_spread.
     
    float shoot_length
    float shoot_length
     Length of shoots.
     
    float shoot_length_spread
    float shoot_length_spread
     Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be between shoot_length - shoot_length_spread and shoot_length + shoot_length_spread.
     
    float shoot_radius
    float shoot_radius
     Radius of shoot branches.
     
    float shoot_radius_spread
    float shoot_radius_spread
     Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be between shoot_radius - shoot_radius_spread and shoot_radius + shoot_radius_spread.
     
    uint shoots_per_cordon
    uint shoots_per_cordon
     Number of shoots on each cordon.
     
    uint shoots_per_cordon_spread
    uint shoots_per_cordon_spread
     Spread value for the number of shoots per cordon. With any new canopy or plant generation, the number of shoots per cordon would be between shoots_per_cordon - shoots_per_cordon_spread and shoots_per_cordon + shoots_per_cordon_spread.
     
    float leaf_spacing_fraction
    float leaf_spacing_fraction
     Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = 1 would give a leaf spacing equal to the leaf width.
     
    float leaf_spacing_fraction_spread
    float leaf_spacing_fraction_spread
     Spread value for the leaf spacing fraction. With any new canopy or plant generation, the leaf spacing fraction would be between leaf_spacing_fraction - leaf_spacing_fraction_spread and leaf_spacing_fraction + leaf_spacing_fraction_spread.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float grape_radius
    float grape_radius
     Radius of grape berries.
     
    float grape_radius_spread
    float grape_radius_spread
     Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be between grape_radius - grape_radius_spread and grape_radius + grape_radius_spread.
     
    float cluster_radius
    float cluster_radius
     Maximum horizontal radius of grape clusters.
     
    float cluster_radius_spread
    float cluster_radius_spread
     Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius would be between cluster_radius - cluster_radius_spread and cluster_radius + cluster_radius_spread.
     
    float cluster_height_max
    float cluster_height_max
     Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
     
    float cluster_height_max_spread
    float cluster_height_max_spread
     Spread value for the cluster height. With any new canopy or plant generation, the cluster height would be between cluster_height - cluster_height_spread and cluster_height + cluster_height_spread.
     
    helios::RGBcolor grape_color
    helios::RGBcolor grape_color
     Color of grapes.
     
    uint grape_subdivisions
    uint grape_subdivisions
     Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subdivisions)^2 triangles per grape berry)
     
    uint grape_subdivisions_spread
    uint grape_subdivisions_spread
     Spread value for the number of grape subdivisions. With any new canopy or plant generation, the number of grape subdivisions would be between grape_subdivisions - grape_subdivisions_spread and grape_subdivisions + grape_subdivisions_spread.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    float canopy_rotation_spread
    float canopy_rotation_spread
     Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotation would be between canopy_rotation - canopy_rotation_spread and canopy_rotation + canopy_rotation_spread.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -325,7 +325,7 @@

    SplitGrapevineParameters::SplitGrapevineParameters ( - ) + ) @@ -346,8 +346,7 @@

    SplitGrapevineParameters::SplitGrapevineParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -376,8 +375,7 @@

    void SplitGrapevineParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -408,19 +406,12 @@

    void SplitGrapevineParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -447,8 +438,7 @@

    void SplitGrapevineParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -582,7 +572,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_split_grapevine_parameters.png b/doc/html/struct_split_grapevine_parameters.png index f4ee5ed557a3af35dd3e8c8238f54139e2e72603..7320ac96ba6e8371cd380b2018d3f2611f46f9dd 100644 GIT binary patch delta 21 dcmdnSv5jMb9oK^g5B~rEZ+bRt$wrTN%m96}3)lbv delta 21 dcmdnSv5jMb9oK;a2mb&6A3W*uij5xcm;rkz3)}zz diff --git a/doc/html/struct_strawberry_parameters.html b/doc/html/struct_strawberry_parameters.html index a1473586f..83eb3fc4c 100644 --- a/doc/html/struct_strawberry_parameters.html +++ b/doc/html/struct_strawberry_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the strawberry plant canopy. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,88 +120,82 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     StrawberryParameters ()
     StrawberryParameters ()
     Default constructor.
     
     StrawberryParameters (const pugi::xml_node canopy_node)
     StrawberryParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float leaf_length
    float leaf_length
     Maximum width of leaves.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    helios::RGBcolor stem_color
    helios::RGBcolor stem_color
     Color of stems.
     
    int stem_subdivisions
    int stem_subdivisions
     Number of radial subdivisions for stem tubes.
     
    int stems_per_plant
    int stems_per_plant
     Number of stems per plant.
     
    float stem_radius
    float stem_radius
     Radius of stems.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float plant_height
    float plant_height
     Height of the plant.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float fruit_radius
    float fruit_radius
     Radius of strawberry fruit.
     
    std::string fruit_texture_file
    std::string fruit_texture_file
     Texture map for strawberry fruit.
     
    uint fruit_subdivisions
    uint fruit_subdivisions
     Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisions^2 triangles per fruit)
     
    float clusters_per_stem
    float clusters_per_stem
     Number of strawberry clusters per plant stem. Clusters randomly have 1, 2, or 3 berries.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -207,7 +213,7 @@

    StrawberryParameters::StrawberryParameters ( - ) + ) @@ -228,8 +234,7 @@

    StrawberryParameters::StrawberryParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -258,8 +263,7 @@

    void StrawberryParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -290,19 +294,12 @@

    void StrawberryParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -329,8 +326,7 @@

    void StrawberryParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -626,7 +622,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_strawberry_parameters.png b/doc/html/struct_strawberry_parameters.png index 66c5347f71af24bf5c088b39e2ddb52f0926ab63..fac0f6d55c9c9e5d191b70a724f2a18e04439e91 100644 GIT binary patch delta 21 dcmX@YdW3a?9oK^g5B~rEZ+bRt$wrSFCIEhn3wr Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the tomato plant canopy. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,79 +120,73 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     TomatoParameters ()
     TomatoParameters ()
     Default constructor.
     
     TomatoParameters (const pugi::xml_node canopy_node)
     TomatoParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float leaf_length
    float leaf_length
     Maximum width of leaves.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    helios::RGBcolor shoot_color
    helios::RGBcolor shoot_color
     Color of shoots.
     
    int shoot_subdivisions
    int shoot_subdivisions
     Number of radial subdivisions for shoot tubes.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float plant_height
    float plant_height
     Height of the plant.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float fruit_radius
    float fruit_radius
     Radius of tomato fruit.
     
    helios::RGBcolor fruit_color
    helios::RGBcolor fruit_color
     Color of tomato fruit.
     
    uint fruit_subdivisions
    uint fruit_subdivisions
     Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisions^2 triangles per fruit)
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -198,7 +204,7 @@

    TomatoParameters::TomatoParameters ( - ) + ) @@ -219,8 +225,7 @@

    TomatoParameters::TomatoParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -249,8 +254,7 @@

    void TomatoParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -281,19 +285,12 @@

    void TomatoParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -320,8 +317,7 @@

    void TomatoParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -563,7 +559,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_tomato_parameters.png b/doc/html/struct_tomato_parameters.png index 290d9fccdf937d96030c8e98bd5ec97e71050d1b..633a1884afc4bbe76c01b3d2839672ae51090536 100644 GIT binary patch delta 21 dcmeBY?Pr}}$MxXBga7~ko1P6@veCnx2>^B43fuqy delta 21 dcmeBY?Pr}}$93Sqf&c&i2T!`ZVxxyU6998h3g7?$ diff --git a/doc/html/struct_triad.html b/doc/html/struct_triad.html index e5f6f6d38..8b2a70630 100644 --- a/doc/html/struct_triad.html +++ b/doc/html/struct_triad.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,34 +106,34 @@ - + - + - + - +

    Public Member Functions

     Triad (int x, int y)
     Triad (int x, int y)
     
     Triad (int x, int y, int z)
     Triad (int x, int y, int z)
     
     Triad (const Triad &p)
     Triad (const Triad &p)
     
    Triad & operator= (const Triad &p)
    Triad & operator= (const Triad &p)
     
    - + - + - + - + - + - + - + - + - +

    Data Fields

    int a
    int a
     
    int b
    int b
     
    int c
    int c
     
    int ab
    int ab
     
    int bc
    int bc
     
    int ac
    int ac
     
    float ro
    float ro
     
    float R
    float R
     
    float C
    float C
     

    Detailed Description

    @@ -140,7 +152,7 @@

    Triad::Triad ( - ) + ) @@ -167,19 +179,12 @@

    Triad::Triad ( - int  - x, + int x, - int  - y  - - - - ) - + int y ) @@ -205,25 +210,17 @@

    Triad::Triad ( - int  - x, + int x, - int  - y, + int y, - int  - z  - - - - ) - + int z ) @@ -249,8 +246,7 @@

    Triad::Triad ( - const Triad &  - p) + const Triad & p) @@ -278,8 +274,7 @@

    Triad & Triad::operator= ( - const Triad &  - p) + const Triad & p) @@ -375,35 +370,35 @@

    -

    ◆ c

    + +

    ◆ C

    - +
    int Triad::cfloat Triad::C
    -

    Definition at line 35 of file s_hull_pro.h.

    +

    Definition at line 37 of file s_hull_pro.h.

    - -

    ◆ C

    + +

    ◆ c

    - +
    float Triad::Cint Triad::c
    -

    Definition at line 37 of file s_hull_pro.h.

    +

    Definition at line 35 of file s_hull_pro.h.

    @@ -445,7 +440,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_triangulation.html b/doc/html/struct_triangulation.html index d5f453f9f..f8db1d90e 100644 --- a/doc/html/struct_triangulation.html +++ b/doc/html/struct_triangulation.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -94,30 +106,30 @@ - +

    Public Member Functions

     Triangulation (int __scanID, helios::vec3 __vertex0, helios::vec3 __vertex1, helios::vec3 __vertex2, int __ID0, int __ID1, int __ID2, helios::RGBcolor __color, int __gridcell)
     Triangulation (int __scanID, helios::vec3 __vertex0, helios::vec3 __vertex1, helios::vec3 __vertex2, int __ID0, int __ID1, int __ID2, helios::RGBcolor __color, int __gridcell)
     
    - + - + - + - + - + - + - + - + - + - +

    Data Fields

    helios::vec3 vertex0
    helios::vec3 vertex0
     
    helios::vec3 vertex1
    helios::vec3 vertex1
     
    helios::vec3 vertex2
    helios::vec3 vertex2
     
    int ID0
    int ID0
     
    int ID1
    int ID1
     
    int ID2
    int ID2
     
    int scanID
    int scanID
     
    int gridcell
    int gridcell
     
    helios::RGBcolor color
    helios::RGBcolor color
     
    float area
    float area
     

    Detailed Description

    @@ -136,8 +148,7 @@

    Triangulation::Triangulation ( - void  - ) + void ) @@ -164,61 +175,47 @@

    Triangulation::Triangulation ( - int  - __scanID, + int __scanID, - helios::vec3  - __vertex0, + helios::vec3 __vertex0, - helios::vec3  - __vertex1, + helios::vec3 __vertex1, - helios::vec3  - __vertex2, + helios::vec3 __vertex2, - int  - __ID0, + int __ID0, - int  - __ID1, + int __ID1, - int  - __ID2, + int __ID2, - helios::RGBcolor  - __color, + helios::RGBcolor __color, - int  - __gridcell  - - - - ) - + int __gridcell ) @@ -399,7 +396,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_unilateral_grapevine_parameters.html b/doc/html/struct_unilateral_grapevine_parameters.html index 8cdcf0942..8b994ff5c 100644 --- a/doc/html/struct_unilateral_grapevine_parameters.html +++ b/doc/html/struct_unilateral_grapevine_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions
    @@ -92,7 +104,7 @@

    Parameters defining the grapevine canopy with unilateral trellis. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,187 +120,175 @@ - + - + - + - + - + - - + + - + - + - - - - - - - - + + - + - + - - - - - -

    Public Member Functions

     UnilateralGrapevineParameters ()
     UnilateralGrapevineParameters ()
     Default constructor.
     
     UnilateralGrapevineParameters (const pugi::xml_node canopy_node)
     UnilateralGrapevineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
     Default constructor.
     
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Additional Inherited Members

    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
     Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is the width at the base of the shoot.
     
    float leaf_width_spread
    float leaf_width_spread
     Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf width would be between leaf_width - leaf_width_spread and leaf_width + leaf_width_spread.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for trunks/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for trunk/cordon/shoot tubes.
     
    int wood_subdivisions_spread
    int wood_subdivisions_spread
     Spread value for the number of wood subdivisions. With any new canopy or plant generation, the maximum number of wood subdivisions would be between wood_subdivisions - wood_subdivisions_spread and wood_subdivisions + wood_subdivisions_spread.
     
    float dead_probability
    float dead_probability
     Probability for a plant to be dead, i.e. without any leaves or grapes.
     
    float missing_plant_probability
    float missing_plant_probability
     Probability for a plant to be missing.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float plant_spacing_spread
    float plant_spacing_spread
     Spread value for the plant spacing. The spacing between adjacent plants along a row would vary between plant_spacing - plant_spacing_spread and plant_spacing + plant_spacing_spread.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float row_spacing_spread
    float row_spacing_spread
     Spread value for the row spacing. This allows to vary the alignment of plants along a row. The spacing between two plants of adjacent rows would be between row_spacing - row_spacing_spread and row_spacing + row_spacing_spread.
     
    float trunk_height
    float trunk_height
     Distance between the ground and top of trunks.
     
    float trunk_height_spread
    float trunk_height_spread
     Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be between trunk_height - trunk_height_spread and trunk_height + trunk_height_spread.
     
    float trunk_radius
    float trunk_radius
     Radius of the trunk at the widest point.
     
    float trunk_radius_spread
    float trunk_radius_spread
     Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be between trunk_radius - trunk_radius_spread and trunk_radius + trunk_radius_spread.
     
    float cordon_length
    float cordon_length
     Length of the cordons. By default, half the plant spacing.
     
    float cordon_length_spread
    float cordon_length_spread
     Spread value for the cordon length. With any new canopy or plant generation, the cordon length would be between cordon_length - cordon_length_spread and cordon_length + cordon_length_spread.
     
    float cordon_height
    float cordon_height
     Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
     
    float cordon_height_spread
    float cordon_height_spread
     Spread value for the cordon height. With any new canopy or plant generation, the cordon height would be between cordon_height - cordon_height_spread and cordon_height + cordon_height_spread.
     
    float cordon_radius
    float cordon_radius
     Radius of cordon branches.
     
    float cordon_radius_spread
    float cordon_radius_spread
     Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would be between cordon_radius - cordon_radius_spread and cordon_radius + cordon_radius_spread.
     
    float shoot_length
    float shoot_length
     Length of shoots.
     
    float shoot_length_spread
    float shoot_length_spread
     Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be between shoot_length - shoot_length_spread and shoot_length + shoot_length_spread.
     
    float shoot_radius
    float shoot_radius
     Radius of shoot branches.
     
    float shoot_radius_spread
    float shoot_radius_spread
     Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be between shoot_radius - shoot_radius_spread and shoot_radius + shoot_radius_spread.
     
    uint shoots_per_cordon
    uint shoots_per_cordon
     Number of shoots on each cordon.
     
    uint shoots_per_cordon_spread
    uint shoots_per_cordon_spread
     Spread value for the number of shoots per cordon. With any new canopy or plant generation, the number of shoots per cordon would be between shoots_per_cordon - shoots_per_cordon_spread and shoots_per_cordon + shoots_per_cordon_spread.
     
    float leaf_spacing_fraction
    float leaf_spacing_fraction
     Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = 1 would give a leaf spacing equal to the leaf width.
     
    float leaf_spacing_fraction_spread
    float leaf_spacing_fraction_spread
     Spread value for the leaf spacing fraction. With any new canopy or plant generation, the leaf spacing fraction would be between leaf_spacing_fraction - leaf_spacing_fraction_spread and leaf_spacing_fraction + leaf_spacing_fraction_spread.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float grape_radius
    float grape_radius
     Radius of grape berries.
     
    float grape_radius_spread
    float grape_radius_spread
     Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be between grape_radius - grape_radius_spread and grape_radius + grape_radius_spread.
     
    float cluster_radius
    float cluster_radius
     Maximum horizontal radius of grape clusters.
     
    float cluster_radius_spread
    float cluster_radius_spread
     Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius would be between cluster_radius - cluster_radius_spread and cluster_radius + cluster_radius_spread.
     
    float cluster_height_max
    float cluster_height_max
     Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
     
    float cluster_height_max_spread
    float cluster_height_max_spread
     Spread value for the cluster height. With any new canopy or plant generation, the cluster height would be between cluster_height - cluster_height_spread and cluster_height + cluster_height_spread.
     
    helios::RGBcolor grape_color
    helios::RGBcolor grape_color
     Color of grapes.
     
    uint grape_subdivisions
    uint grape_subdivisions
     Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subdivisions)^2 triangles per grape berry)
     
    uint grape_subdivisions_spread
    uint grape_subdivisions_spread
     Spread value for the number of grape subdivisions. With any new canopy or plant generation, the number of grape subdivisions would be between grape_subdivisions - grape_subdivisions_spread and grape_subdivisions + grape_subdivisions_spread.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    float canopy_rotation_spread
    float canopy_rotation_spread
     Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotation would be between canopy_rotation - canopy_rotation_spread and canopy_rotation + canopy_rotation_spread.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -306,7 +306,7 @@

    UnilateralGrapevineParameters::UnilateralGrapevineParameters ( - ) + ) @@ -327,8 +327,7 @@

    UnilateralGrapevineParameters::UnilateralGrapevineParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -357,8 +356,7 @@

    void UnilateralGrapevineParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -389,19 +387,12 @@

    void UnilateralGrapevineParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -428,8 +419,7 @@

    void UnilateralGrapevineParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -454,7 +444,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_unilateral_grapevine_parameters.png b/doc/html/struct_unilateral_grapevine_parameters.png index 11b01f8d8af8af3b5c294cd19ad3edf4b7402d89..ae7ea8379ee322cba418e47f1c4a0849ca95b6ba 100644 GIT binary patch delta 21 dcmX@dagJkx9oK^g5B~rEZ+bRt$wm)0765;w3n2gi delta 21 dcmX@dagJkx9oK;a2mb&6A3W*uij5v@EC78O3nc&m diff --git a/doc/html/struct_v_s_p_grapevine_parameters.html b/doc/html/struct_v_s_p_grapevine_parameters.html index e32f5ca5e..144be6f2c 100644 --- a/doc/html/struct_v_s_p_grapevine_parameters.html +++ b/doc/html/struct_v_s_p_grapevine_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions
    @@ -92,7 +104,7 @@

    Parameters defining the grapevine canopy with vertical shoot positioned (VSP) trellis. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,187 +120,175 @@ - + - + - + - + - + - - + + - + - + - - - - - - - - + + - + - + - - - - - -

    Public Member Functions

     VSPGrapevineParameters ()
     VSPGrapevineParameters ()
     Default constructor.
     
     VSPGrapevineParameters (const pugi::xml_node canopy_node)
     VSPGrapevineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
    - Public Member Functions inherited from BaseGrapeVineParameters
     BaseGrapeVineParameters ()
     Default constructor.
     
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     BaseGrapeVineParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - - + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Additional Inherited Members

    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
    - Data Fields inherited from BaseGrapeVineParameters
    float leaf_width
     Maximum width of leaves. Leaf width increases logarithmically from the shoot tip, so leaf_width is the width at the base of the shoot.
     
    float leaf_width_spread
    float leaf_width_spread
     Spread value for the maximum leaf width. With any new canopy or plant generation, the maximum leaf width would be between leaf_width - leaf_width_spread and leaf_width + leaf_width_spread.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for trunks/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for trunk/cordon/shoot tubes.
     
    int wood_subdivisions_spread
    int wood_subdivisions_spread
     Spread value for the number of wood subdivisions. With any new canopy or plant generation, the maximum number of wood subdivisions would be between wood_subdivisions - wood_subdivisions_spread and wood_subdivisions + wood_subdivisions_spread.
     
    float dead_probability
    float dead_probability
     Probability for a plant to be dead, i.e. without any leaves or grapes.
     
    float missing_plant_probability
    float missing_plant_probability
     Probability for a plant to be missing.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float plant_spacing_spread
    float plant_spacing_spread
     Spread value for the plant spacing. The spacing between adjacent plants along a row would vary between plant_spacing - plant_spacing_spread and plant_spacing + plant_spacing_spread.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float row_spacing_spread
    float row_spacing_spread
     Spread value for the row spacing. This allows to vary the alignment of plants along a row. The spacing between two plants of adjacent rows would be between row_spacing - row_spacing_spread and row_spacing + row_spacing_spread.
     
    float trunk_height
    float trunk_height
     Distance between the ground and top of trunks.
     
    float trunk_height_spread
    float trunk_height_spread
     Spread value for the trunk height. With any new canopy or plant generation, the trunk height would be between trunk_height - trunk_height_spread and trunk_height + trunk_height_spread.
     
    float trunk_radius
    float trunk_radius
     Radius of the trunk at the widest point.
     
    float trunk_radius_spread
    float trunk_radius_spread
     Spread value for the trunk radius. With any new canopy or plant generation, the trunk radius would be between trunk_radius - trunk_radius_spread and trunk_radius + trunk_radius_spread.
     
    float cordon_length
    float cordon_length
     Length of the cordons. By default, half the plant spacing.
     
    float cordon_length_spread
    float cordon_length_spread
     Spread value for the cordon length. With any new canopy or plant generation, the cordon length would be between cordon_length - cordon_length_spread and cordon_length + cordon_length_spread.
     
    float cordon_height
    float cordon_height
     Distance between the ground and cordon. Note - must be greater than or equal to the trunk height.
     
    float cordon_height_spread
    float cordon_height_spread
     Spread value for the cordon height. With any new canopy or plant generation, the cordon height would be between cordon_height - cordon_height_spread and cordon_height + cordon_height_spread.
     
    float cordon_radius
    float cordon_radius
     Radius of cordon branches.
     
    float cordon_radius_spread
    float cordon_radius_spread
     Spread value for the cordon radius. With any new canopy or plant generation, the cordon radius would be between cordon_radius - cordon_radius_spread and cordon_radius + cordon_radius_spread.
     
    float shoot_length
    float shoot_length
     Length of shoots.
     
    float shoot_length_spread
    float shoot_length_spread
     Spread value for the shoot length. With any new canopy or plant generation, the shoot length would be between shoot_length - shoot_length_spread and shoot_length + shoot_length_spread.
     
    float shoot_radius
    float shoot_radius
     Radius of shoot branches.
     
    float shoot_radius_spread
    float shoot_radius_spread
     Spread value for the shoot radius. With any new canopy or plant generation, the shoot radius would be between shoot_radius - shoot_radius_spread and shoot_radius + shoot_radius_spread.
     
    uint shoots_per_cordon
    uint shoots_per_cordon
     Number of shoots on each cordon.
     
    uint shoots_per_cordon_spread
    uint shoots_per_cordon_spread
     Spread value for the number of shoots per cordon. With any new canopy or plant generation, the number of shoots per cordon would be between shoots_per_cordon - shoots_per_cordon_spread and shoots_per_cordon + shoots_per_cordon_spread.
     
    float leaf_spacing_fraction
    float leaf_spacing_fraction
     Spacing between adjacent leaves as a fraction of the local leaf width. E.g., leaf_spacing_fraction = 1 would give a leaf spacing equal to the leaf width.
     
    float leaf_spacing_fraction_spread
    float leaf_spacing_fraction_spread
     Spread value for the leaf spacing fraction. With any new canopy or plant generation, the leaf spacing fraction would be between leaf_spacing_fraction - leaf_spacing_fraction_spread and leaf_spacing_fraction + leaf_spacing_fraction_spread.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    float grape_radius
    float grape_radius
     Radius of grape berries.
     
    float grape_radius_spread
    float grape_radius_spread
     Spread value for the grape radius. With any new canopy or plant generation, the grape radius would be between grape_radius - grape_radius_spread and grape_radius + grape_radius_spread.
     
    float cluster_radius
    float cluster_radius
     Maximum horizontal radius of grape clusters.
     
    float cluster_radius_spread
    float cluster_radius_spread
     Spread value for the cluster radius. With any new canopy or plant generation, the cluster radius would be between cluster_radius - cluster_radius_spread and cluster_radius + cluster_radius_spread.
     
    float cluster_height_max
    float cluster_height_max
     Maximum height of grape clusters along the shoot as a fraction of the total shoot length.
     
    float cluster_height_max_spread
    float cluster_height_max_spread
     Spread value for the cluster height. With any new canopy or plant generation, the cluster height would be between cluster_height - cluster_height_spread and cluster_height + cluster_height_spread.
     
    helios::RGBcolor grape_color
    helios::RGBcolor grape_color
     Color of grapes.
     
    uint grape_subdivisions
    uint grape_subdivisions
     Number of azimuthal and zenithal subdivisions making up berries (will result in roughly 2*(grape_subdivisions)^2 triangles per grape berry)
     
    uint grape_subdivisions_spread
    uint grape_subdivisions_spread
     Spread value for the number of grape subdivisions. With any new canopy or plant generation, the number of grape subdivisions would be between grape_subdivisions - grape_subdivisions_spread and grape_subdivisions + grape_subdivisions_spread.
     
    std::vector< float > leaf_angle_PDF
    std::vector< float > leaf_angle_PDF
     
    float canopy_rotation_spread
    float canopy_rotation_spread
     Spread value for the canopy rotation. With any new canopy or plant generation, the canopy/plant rotation would be between canopy_rotation - canopy_rotation_spread and canopy_rotation + canopy_rotation_spread.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -306,7 +306,7 @@

    VSPGrapevineParameters::VSPGrapevineParameters ( - ) + ) @@ -327,8 +327,7 @@

    VSPGrapevineParameters::VSPGrapevineParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -357,8 +356,7 @@

    void VSPGrapevineParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -389,19 +387,12 @@

    void VSPGrapevineParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -428,8 +419,7 @@

    void VSPGrapevineParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -454,7 +444,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_v_s_p_grapevine_parameters.png b/doc/html/struct_v_s_p_grapevine_parameters.png index f4a46823536a08f2373c2fe6edda5c9add3189ca..f7b0f0c85163011b988bb28659c4fd0b323b2ad2 100644 GIT binary patch delta 21 dcmdnav7KXr9oK^g5B~rEZ+bRt$wrU&%m97e3)=ty delta 21 dcmdnav7KXr9oK;a2mb&6A3W*uij5xcnE`uJ3*P_$ diff --git a/doc/html/struct_vegetative_bud.html b/doc/html/struct_vegetative_bud.html index 8df439972..f7495a8db 100644 --- a/doc/html/struct_vegetative_bud.html +++ b/doc/html/struct_vegetative_bud.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -93,11 +105,11 @@ - + - + - +

    Data Fields

    BudState state = BUD_DORMANT
    BudState state = BUD_DORMANT
     
    std::string shoot_type_label
    std::string shoot_type_label
     
    uint shoot_ID = -1
    uint shoot_ID = -1
     

    Detailed Description

    @@ -158,7 +170,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_walnut_canopy_parameters.html b/doc/html/struct_walnut_canopy_parameters.html index 88fa4ae5d..643faf11d 100644 --- a/doc/html/struct_walnut_canopy_parameters.html +++ b/doc/html/struct_walnut_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the walnut tree canopy. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,85 +120,79 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     WalnutCanopyParameters ()
     WalnutCanopyParameters ()
     Default constructor.
     
     WalnutCanopyParameters (const pugi::xml_node canopy_node)
     WalnutCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float leaf_length
    float leaf_length
     Maximum length of leaves along midrib.
     
    helios::int2 leaf_subdivisions
    helios::int2 leaf_subdivisions
     Number of sub-division segments per leaf.
     
    std::string leaf_texture_file
    std::string leaf_texture_file
     Path to texture map file for leaves.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for wood/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for branch tubes.
     
    float trunk_radius
    float trunk_radius
     Radius of trunk.
     
    float trunk_height
    float trunk_height
     Height of the trunk.
     
    helios::vec3 branch_length
    helios::vec3 branch_length
     Average length of branches in each recursive branch level. For example, the first (.x) value is the length of branches emanating from the trunk, the second (.y) is the the length of branches emanating from the first branching level.
     
    float plant_spacing
    float plant_spacing
     Spacing between adjacent plants along the row direction.
     
    float row_spacing
    float row_spacing
     Spacing between plant rows.
     
    float fruit_radius
    float fruit_radius
     Radius of walnuts.
     
    std::string fruit_texture_file
    std::string fruit_texture_file
     Texture map for walnut fruit.
     
    uint fruit_subdivisions
    uint fruit_subdivisions
     Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisions^2 triangles per fruit)
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -204,7 +210,7 @@

    WalnutCanopyParameters::WalnutCanopyParameters ( - ) + ) @@ -225,8 +231,7 @@

    WalnutCanopyParameters::WalnutCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -255,8 +260,7 @@

    void WalnutCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -287,19 +291,12 @@

    void WalnutCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -326,8 +323,7 @@

    void WalnutCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -605,7 +601,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_walnut_canopy_parameters.png b/doc/html/struct_walnut_canopy_parameters.png index 3961a131c398d82aa9085a822d68b992d7de5af5..edcd088f86d722f42489d7d9c785a75290a9fcb3 100644 GIT binary patch delta 21 dcmcb?dV_U>9oK^g5B~rEZ+bRt$wrR}OaOt@3%39O delta 21 dcmcb?dV_U>9oK;a2mb&6A3W*uij5u Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Data Fields
    @@ -93,87 +105,87 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    std::string label
    std::string label
     
    int Shape
    int Shape
     
    float BaseSize
    float BaseSize
     
    float BaseSizeV
    float BaseSizeV
     
    uint BaseSplits
    uint BaseSplits
     
    uint BaseSplitsV
    uint BaseSplitsV
     
    float BaseSplitSize
    float BaseSplitSize
     
    float BaseSplitSizeV
    float BaseSplitSizeV
     
    float Scale
    float Scale
     
    float ScaleV
    float ScaleV
     
    float ZScale
    float ZScale
     
    float ZScaleV
    float ZScaleV
     
    float Ratio
    float Ratio
     
    float RatioPower
    float RatioPower
     
    int Lobes
    int Lobes
     
    float LobeDepth
    float LobeDepth
     
    float Flare
    float Flare
     
    int Levels
    int Levels
     
    std::vector< float > nSegSplits
    std::vector< float > nSegSplits
     
    std::vector< float > nSplitAngle
    std::vector< float > nSplitAngle
     
    std::vector< float > nSplitAngleV
    std::vector< float > nSplitAngleV
     
    std::vector< int > nCurveRes
    std::vector< int > nCurveRes
     
    std::vector< float > nCurve
    std::vector< float > nCurve
     
    std::vector< float > nCurveV
    std::vector< float > nCurveV
     
    std::vector< float > nCurveBack
    std::vector< float > nCurveBack
     
    std::vector< float > nLength
    std::vector< float > nLength
     
    std::vector< float > nLengthV
    std::vector< float > nLengthV
     
    std::vector< float > nTaper
    std::vector< float > nTaper
     
    std::vector< float > nDownAngle
    std::vector< float > nDownAngle
     
    std::vector< float > nDownAngleV
    std::vector< float > nDownAngleV
     
    std::vector< float > nRotate
    std::vector< float > nRotate
     
    std::vector< float > nRotateV
    std::vector< float > nRotateV
     
    std::vector< int > nBranches
    std::vector< int > nBranches
     
    std::string LeafFile
    std::string LeafFile
     
    int Leaves
    int Leaves
     
    int LeafShape
    int LeafShape
     
    float LeafScale
    float LeafScale
     
    float LeafScaleX
    float LeafScaleX
     
    helios::RGBcolor WoodColor
    helios::RGBcolor WoodColor
     
    std::string WoodFile
    std::string WoodFile
     
    std::vector< float > leafAngleCDF
    std::vector< float > leafAngleCDF
     

    Detailed Description

    @@ -842,7 +854,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_white_spruce_canopy_parameters.html b/doc/html/struct_white_spruce_canopy_parameters.html index aed886fe0..c7e410165 100644 --- a/doc/html/struct_white_spruce_canopy_parameters.html +++ b/doc/html/struct_white_spruce_canopy_parameters.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -93,7 +105,7 @@

    Parameters defining the white spruce. - More...

    + More...

    #include <CanopyGenerator.h>

    @@ -108,94 +120,88 @@ - + - + - + - + - + - - + + - + - + - - - - - -

    Public Member Functions

     WhiteSpruceCanopyParameters ()
     WhiteSpruceCanopyParameters ()
     Default constructor.
     
     WhiteSpruceCanopyParameters (const pugi::xml_node canopy_node)
     WhiteSpruceCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
    void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin) override
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    void buildCanopy (CanopyGenerator &canopy_generator) override
    void buildCanopy (CanopyGenerator &canopy_generator) override
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
    - Public Member Functions inherited from BaseCanopyParameters
     BaseCanopyParameters ()
     Default constructor.
     
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     BaseCanopyParameters (const pugi::xml_node canopy_node)
     
    void readParametersFromXML (const pugi::xml_node canopy_node)
    void readParametersFromXML (const pugi::xml_node canopy_node)
     Sets canopy parameters from the given XML node.
     
    virtual void buildPlant (CanopyGenerator &canopy_generator, helios::vec3 origin)=0
     Makes the given Canopy generator build a single plant of our canopy type with our parameters at the given position.
     
    virtual void buildCanopy (CanopyGenerator &canopy_generator)=0
     Makes the given Canopy generator build a canopy of our type with our parameters.
     
    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - + + - +

    Data Fields

    float needle_width
    float needle_width
     Width of needles.
     
    float needle_length
    float needle_length
     Length of needles.
     
    helios::int2 needle_subdivisions
    helios::int2 needle_subdivisions
     Number of sub-division segments per needle.
     
    helios::RGBcolor needle_color
    helios::RGBcolor needle_color
     Color of needles.
     
    std::string wood_texture_file
    std::string wood_texture_file
     Path to texture map file for trunks/branches.
     
    int wood_subdivisions
    int wood_subdivisions
     Number of radial subdivisions for trunk/cordon/shoot tubes.
     
    float trunk_height
    float trunk_height
     Distance between the ground and top of trunks.
     
    float trunk_radius
    float trunk_radius
     Radius of the trunk at the base.
     
    float base_height
    float base_height
     Height at which branches start.
     
    float crown_radius
    float crown_radius
     Radius of the crown at the base.
     
    float shoot_radius
    float shoot_radius
     Radius of shoot branches.
     
    float level_spacing
    float level_spacing
     Vertical spacing between branching levels.
     
    int branches_per_level
    int branches_per_level
     Number of primary branches on the bottom level.
     
    float shoot_angle
    float shoot_angle
     Maximum shoot angle.
     
    std::string canopy_configuration
    std::string canopy_configuration
     Specifies whether to use a uniformly spaced canopy (canopy_configuration="uniform") or a randomly arranged canopy with non-overlapping crowns (canopy_configuration="random").
     
    helios::vec2 plant_spacing
    helios::vec2 plant_spacing
     Spacing between adjacent crowns in the x- and y-directions. Note that if canopy_configuration='random' this is the average spacing.
     
    helios::int2 plant_count
    helios::int2 plant_count
     Number of crowns/plants in the x- and y-directions.
     
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
    - Data Fields inherited from BaseCanopyParameters
    helios::vec3 canopy_origin
     Cartesian (x,y,z) coordinate of the bottom center point of the canopy (i.e., specifying z=0 places the bottom surface of the canopy at z=0).
     
    float canopy_rotation
    float canopy_rotation
     Azimuthal rotation of the canopy about the canopy origin. Note that if canopy_rotation is not equal to zero, the plant_spacing and plant_count parameters are defined in the x- and y-directions before rotation.
     
    @@ -213,7 +219,7 @@

    WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters ( - ) + ) @@ -234,8 +240,7 @@

    WhiteSpruceCanopyParameters::WhiteSpruceCanopyParameters ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -264,8 +269,7 @@

    void WhiteSpruceCanopyParameters::buildCanopy ( - CanopyGenerator &  - canopy_generator) + CanopyGenerator & canopy_generator) @@ -296,19 +300,12 @@

    void WhiteSpruceCanopyParameters::buildPlant ( - CanopyGenerator &  - canopy_generator, + CanopyGenerator & canopy_generator, - helios::vec3  - origin  - - - - ) - + helios::vec3 origin ) @@ -335,8 +332,7 @@

    void WhiteSpruceCanopyParameters::readParametersFromXML ( - const pugi::xml_node  - canopy_node) + const pugi::xml_node canopy_node) @@ -668,7 +664,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/struct_white_spruce_canopy_parameters.png b/doc/html/struct_white_spruce_canopy_parameters.png index c671a48f49bc665844a5906664e774d15c6a9d38..dc2ee3ddf37261ccde6e14e41da239fb1d647e3e 100644 GIT binary patch delta 21 dcmbQqHj{0F9oK^g5B~rEZ+bRt$wrThOaOSK3w!_o delta 21 dcmbQqHj{0F9oK;a2mb&6A3W*uij5u@nE-Yf3xEIs diff --git a/doc/html/structhelios_1_1_date.html b/doc/html/structhelios_1_1_date.html index 540af1e45..871b3748c 100644 --- a/doc/html/structhelios_1_1_date.html +++ b/doc/html/structhelios_1_1_date.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,49 +110,49 @@

    Date vector. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - +

    Public Member Functions

     Date ()
     Date ()
     Default constructor.
     
     Date (int day, int month, int year)
     Date (int day, int month, int year)
     Day/Month/Year constructor.
     
    int JulianDay () const
    int JulianDay () const
     Convert to Julian day.
     
    void incrementDay ()
    void incrementDay ()
     Increment Date vector by one day.
     
    bool isLeapYear () const
    bool isLeapYear () const
     Check whether it is a leap year.
     
    bool operator== (const helios::Date &c) const
    bool operator== (const helios::Date &c) const
     check for equality of two dates
     
    bool operator!= (const helios::Date &c) const
    bool operator!= (const helios::Date &c) const
     check for inequality of two Dates
     
    - + - + - +

    Data Fields

    int day
    int day
     Day of month.
     
    int month
    int month
     Month of year.
     
    int year
    int year
     Year in YYYY format.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, helios::Date const &d)
    std::ostream & operator<< (std::ostream &os, helios::Date const &d)
     Write Date to output stream.
     
    @@ -162,7 +174,7 @@

    helios::Date::Date ( - ) + ) @@ -191,25 +203,17 @@

    helios::Date::Date ( - int  - day, + int day, - int  - month, + int month, - int  - year  - - - - ) - + int year ) @@ -243,7 +247,7 @@

    void helios::Date::incrementDay ( - ) + ) @@ -260,14 +264,22 @@

    + + + + + +
    - +
    bool helios::Date::isLeapYear ()) const
    +     		+nodiscard

    Check whether it is a leap year.

    @@ -282,14 +294,22 @@

    + + + + + +
    - +
    int helios::Date::JulianDay ()) const
    +     		+nodiscard

    Convert to Julian day.

    @@ -311,8 +331,7 @@

    bool helios::Date::operator!= ( - const helios::Date &  - c) + const helios::Date & c) const @@ -341,8 +360,7 @@

    bool helios::Date::operator== ( - const helios::Date &  - c) + const helios::Date & c) const @@ -359,7 +377,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -372,19 +390,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - helios::Date const &  - d  - - - - ) - + helios::Date const & d ) @@ -462,7 +473,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_global_data.html b/doc/html/structhelios_1_1_global_data.html index 43ca59a73..c98e9623f 100644 --- a/doc/html/structhelios_1_1_global_data.html +++ b/doc/html/structhelios_1_1_global_data.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +

    +
    Data Fields
    @@ -96,39 +108,39 @@

    Structure for Global Data Entities. - More...

    + More...

    #include <Context.h>

    - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Data Fields

    std::vector< int > global_data_int
    std::vector< int > global_data_int
     
    std::vector< uint > global_data_uint
    std::vector< uint > global_data_uint
     
    std::vector< float > global_data_float
    std::vector< float > global_data_float
     
    std::vector< double > global_data_double
    std::vector< double > global_data_double
     
    std::vector< vec2 > global_data_vec2
    std::vector< vec2 > global_data_vec2
     
    std::vector< vec3 > global_data_vec3
    std::vector< vec3 > global_data_vec3
     
    std::vector< vec4 > global_data_vec4
    std::vector< vec4 > global_data_vec4
     
    std::vector< int2 > global_data_int2
    std::vector< int2 > global_data_int2
     
    std::vector< int3 > global_data_int3
    std::vector< int3 > global_data_int3
     
    std::vector< int4 > global_data_int4
    std::vector< int4 > global_data_int4
     
    std::vector< std::string > global_data_string
    std::vector< std::string > global_data_string
     
    std::vector< bool > global_data_bool
    std::vector< bool > global_data_bool
     
    size_t size
    size_t size
     
    HeliosDataType type
    HeliosDataType type
     

    Detailed Description

    @@ -366,7 +378,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_location.html b/doc/html/structhelios_1_1_location.html index 58fadc062..51e3ee6b2 100644 --- a/doc/html/structhelios_1_1_location.html +++ b/doc/html/structhelios_1_1_location.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,40 +110,40 @@

    Location vector. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - +

    Public Member Functions

     Location ()
     Location ()
     Default constructor.
     
     Location (float latitude_deg, float longitude_deg, float UTC_offset)
     Location (float latitude_deg, float longitude_deg, float UTC_offset)
     latitude/longitude/UTC constructor
     
    bool operator== (const helios::Location &c) const
    bool operator== (const helios::Location &c) const
     check for equality of two locations
     
    bool operator!= (const helios::Location &c) const
    bool operator!= (const helios::Location &c) const
     check for inequality of two locations
     
    - + - + - +

    Data Fields

    float latitude_deg
    float latitude_deg
     Latitude in degrees (+northern hemisphere, -southern hemisphere)
     
    float longitude_deg
    float longitude_deg
     Longitude in degrees (+western hemisphere, -eastern hemisphere)
     
    float UTC_offset
    float UTC_offset
     Offset from UTC in hours (+moving West)
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, helios::Location const &t)
    std::ostream & operator<< (std::ostream &os, helios::Location const &t)
     Write Location to output stream.
     
    @@ -152,7 +164,7 @@

    helios::Location::Location ( - ) + ) @@ -181,25 +193,17 @@

    helios::Location::Location ( - float  - latitude_deg, + float latitude_deg, - float  - longitude_deg, + float longitude_deg, - float  - UTC_offset  - - - - ) - + float UTC_offset ) @@ -235,8 +239,7 @@

    bool helios::Location::operator!= ( - const helios::Location &  - c) + const helios::Location & c) const @@ -265,8 +268,7 @@

    bool helios::Location::operator== ( - const helios::Location &  - c) + const helios::Location & c) const @@ -283,7 +285,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -296,19 +298,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - helios::Location const &  - t  - - - - ) - + helios::Location const & t ) @@ -385,7 +380,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_r_g_b_acolor.html b/doc/html/structhelios_1_1_r_g_b_acolor.html index fe75de278..905c558c9 100644 --- a/doc/html/structhelios_1_1_r_g_b_acolor.html +++ b/doc/html/structhelios_1_1_r_g_b_acolor.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,53 +110,53 @@

    R-G-B-A color vector. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - +

    Public Member Functions

     RGBAcolor ()
     RGBAcolor ()
     Default constructor - initializes color to black.
     
     RGBAcolor (float r, float g, float b, float a)
     RGBAcolor (float r, float g, float b, float a)
     Constructor given three floats denoting R-G-B components.
     
     RGBAcolor (const float C[4])
     RGBAcolor (const float C[4])
     Constructor given an array of three floats denoting R-G-B-A components.
     
     RGBAcolor (const std::vector< float > &C)
     RGBAcolor (const std::vector< float > &C)
     Constructor given a vector of three floats denoting R-G-B-A components.
     
    void scale (float scale_factor)
    void scale (float scale_factor)
     Scale RGBAcolor by some factor.
     
    bool operator== (const helios::RGBAcolor &c) const
    bool operator== (const helios::RGBAcolor &c) const
     check for equality of two RGBA colors
     
    bool operator!= (const helios::RGBAcolor &c) const
    bool operator!= (const helios::RGBAcolor &c) const
     check for inequality of two RGBA colors
     
    - + - + - + - +

    Data Fields

    float r
    float r
     Red color component.
     
    float g
    float g
     Green color component.

     
    float b
    float b
     Blue color component.
     
    float a
    float a
     Alpha (transparency) component.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::RGBAcolor &c)
    std::ostream & operator<< (std::ostream &os, const helios::RGBAcolor &c)
     write RGBAcolor to output stream
     
    @@ -165,7 +177,7 @@

    helios::RGBAcolor::RGBAcolor ( - ) + ) @@ -194,31 +206,22 @@

    helios::RGBAcolor::RGBAcolor ( - float  - r, + float r, - float  - g, + float g, - float  - b, + float b, - float  - a  - - - - ) - + float a ) @@ -256,8 +259,7 @@

    helios::RGBAcolor::RGBAcolor ( - const float  - C[4]) + const float C[4]) @@ -293,8 +295,7 @@

    helios::RGBAcolor::RGBAcolor ( - const std::vector< float > &  - C) + const std::vector< float > & C) @@ -331,8 +332,7 @@

    bool helios::RGBAcolor::operator!= ( - const helios::RGBAcolor &  - c) + const helios::RGBAcolor & c) const @@ -361,8 +361,7 @@

    bool helios::RGBAcolor::operator== ( - const helios::RGBAcolor &  - c) + const helios::RGBAcolor & c) const @@ -391,8 +390,7 @@

    void helios::RGBAcolor::scale ( - float  - scale_factor) + float scale_factor) @@ -415,7 +413,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -428,19 +426,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::RGBAcolor &  - c  - - - - ) - + const helios::RGBAcolor & c ) @@ -540,7 +531,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_r_g_bcolor.html b/doc/html/structhelios_1_1_r_g_bcolor.html index e38b1e4c7..26738cdc5 100644 --- a/doc/html/structhelios_1_1_r_g_bcolor.html +++ b/doc/html/structhelios_1_1_r_g_bcolor.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,53 +110,53 @@

    R-G-B color vector. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - +

    Public Member Functions

     RGBcolor ()
     RGBcolor ()
     Default constructor - initializes color to black.
     
     RGBcolor (float r, float g, float b)
     RGBcolor (float r, float g, float b)
     Constructor given three floats denoting R-G-B components.
     
     RGBcolor (const float C[3])
     RGBcolor (const float C[3])
     Constructor given an array of three floats denoting R-G-B components.
     
     RGBcolor (const std::vector< float > &C)
     RGBcolor (const std::vector< float > &C)
     Constructor given a vector of three floats denoting R-G-B components.
     
     RGBcolor (const vec3 &C)
     RGBcolor (const vec3 &C)
     Constructor given a vec3 denoting R-G-B components.
     
    void scale (float scale_factor)
    void scale (float scale_factor)
     Scale RGBcolor by some factor.
     
    bool operator== (const RGBcolor &c) const
    bool operator== (const RGBcolor &c) const
     check for equality of two RGB colors
     
    bool operator!= (const RGBcolor &c) const
    bool operator!= (const RGBcolor &c) const
     check for inequality of two RGB colors
     
    - + - + - +

    Data Fields

    float r
    float r
     Red color component.
     
    float g
    float g
     Green color component.

     
    float b
    float b
     Blue color component.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::RGBcolor &c)
    std::ostream & operator<< (std::ostream &os, const helios::RGBcolor &c)
     write RGBcolor to output stream
     
    @@ -165,7 +177,7 @@

    helios::RGBcolor::RGBcolor ( - ) + ) @@ -194,25 +206,17 @@

    helios::RGBcolor::RGBcolor ( - float  - r, + float r, - float  - g, + float g, - float  - b  - - - - ) - + float b ) @@ -249,8 +253,7 @@

    helios::RGBcolor::RGBcolor ( - const float  - C[3]) + const float C[3]) @@ -286,8 +289,7 @@

    helios::RGBcolor::RGBcolor ( - const std::vector< float > &  - C) + const std::vector< float > & C) @@ -323,8 +325,7 @@

    helios::RGBcolor::RGBcolor ( - const vec3 &  - C) + const vec3 & C) @@ -361,8 +362,7 @@

    bool helios::RGBcolor::operator!= ( - const RGBcolor &  - c) + const RGBcolor & c) const @@ -391,8 +391,7 @@

    bool helios::RGBcolor::operator== ( - const RGBcolor &  - c) + const RGBcolor & c) const @@ -421,8 +420,7 @@

    void helios::RGBcolor::scale ( - float  - scale_factor) + float scale_factor) @@ -445,7 +443,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -458,19 +456,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::RGBcolor &  - c  - - - - ) - + const helios::RGBcolor & c ) @@ -551,7 +542,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_spherical_coord.html b/doc/html/structhelios_1_1_spherical_coord.html index 0152c4dd0..00a92ed5f 100644 --- a/doc/html/structhelios_1_1_spherical_coord.html +++ b/doc/html/structhelios_1_1_spherical_coord.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,49 +110,49 @@

    Vector of spherical coordinates (elevation,azimuth) - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - +

    Public Member Functions

     SphericalCoord ()
     SphericalCoord ()
     Default constructor.
     
     SphericalCoord (float radius, float elevation_radians, float azimuth_radians)
     SphericalCoord (float radius, float elevation_radians, float azimuth_radians)
     Initialize SphericalCoord by specifying radius, elevation, and azimuth.
     
     SphericalCoord (const SphericalCoord &c)
     SphericalCoord (const SphericalCoord &c)
     Copy constructor.
     
    SphericalCoord & operator= (const SphericalCoord &c)
    SphericalCoord & operator= (const SphericalCoord &c)
     Assignment operator.
     
    bool operator== (const helios::SphericalCoord &c) const
    bool operator== (const helios::SphericalCoord &c) const
     check for equality of two spherical coordinates
     
    bool operator!= (const helios::SphericalCoord &c) const
    bool operator!= (const helios::SphericalCoord &c) const
     check for inequality of two spherical coordinates
     
    - + - + - + - +

    Data Fields

    float radius
    float radius
     Radius.
     
    const float & elevation
    const float & elevation
     Elevation angle (radians)
     
    const float & zenith
    const float & zenith
     Zenithal angle (radians)
     
    float azimuth
    float azimuth
     Azimuthal angle (radians)
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, helios::SphericalCoord const &coord)
    std::ostream & operator<< (std::ostream &os, helios::SphericalCoord const &coord)
     Write SphericalCoord to output stream.
     
    @@ -161,7 +173,7 @@

    helios::SphericalCoord::SphericalCoord ( - ) + ) @@ -191,25 +203,17 @@

    helios::SphericalCoord::SphericalCoord ( - float  - radius, + float radius, - float  - elevation_radians, + float elevation_radians, - float  - azimuth_radians  - - - - ) - + float azimuth_radians ) @@ -245,8 +249,7 @@

    helios::SphericalCoord::SphericalCoord ( - const SphericalCoord &  - c) + const SphericalCoord & c) @@ -276,8 +279,7 @@

    bool helios::SphericalCoord::operator!= ( - const helios::SphericalCoord &  - c) + const helios::SphericalCoord & c) const @@ -306,8 +308,7 @@

    SphericalCoord & helios::SphericalCoord::operator= ( - const SphericalCoord &  - c) + const SphericalCoord & c) @@ -336,8 +337,7 @@

    bool helios::SphericalCoord::operator== ( - const helios::SphericalCoord &  - c) + const helios::SphericalCoord & c) const @@ -354,7 +354,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -367,19 +367,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - helios::SphericalCoord const &  - coord  - - - - ) - + helios::SphericalCoord const & coord ) @@ -474,7 +467,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_time.html b/doc/html/structhelios_1_1_time.html index 1c2858260..9f009a14c 100644 --- a/doc/html/structhelios_1_1_time.html +++ b/doc/html/structhelios_1_1_time.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,43 +110,43 @@

    Time vector. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - +

    Public Member Functions

     Time ()
     Time ()
     Default constructor.
     
     Time (int hour, int minute)
     Time (int hour, int minute)
     second/minute/hour constructor
     
     Time (int hour, int minute, int second)
     Time (int hour, int minute, int second)
     minute/hour constructor
     
    bool operator== (const helios::Time &c) const
    bool operator== (const helios::Time &c) const
     check for equality of two times
     
    bool operator!= (const helios::Time &c) const
    bool operator!= (const helios::Time &c) const
     check for inequality of two times
     
    - + - + - +

    Data Fields

    int second
    int second
     Second of minute.
     
    int minute
    int minute
     Minute of hour.
     
    int hour
    int hour
     Hour of day.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, helios::Time const &t)
    std::ostream & operator<< (std::ostream &os, helios::Time const &t)
     Write Time to output stream.
     
    @@ -156,7 +168,7 @@

    helios::Time::Time ( - ) + ) @@ -185,19 +197,12 @@

    helios::Time::Time ( - int  - hour, + int hour, - int  - minute  - - - - ) - + int minute ) @@ -232,25 +237,17 @@

    helios::Time::Time ( - int  - hour, + int hour, - int  - minute, + int minute, - int  - second  - - - - ) - + int second ) @@ -287,8 +284,7 @@

    bool helios::Time::operator!= ( - const helios::Time &  - c) + const helios::Time & c) const @@ -317,8 +313,7 @@

    bool helios::Time::operator== ( - const helios::Time &  - c) + const helios::Time & c) const @@ -335,7 +330,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -348,19 +343,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - helios::Time const &  - t  - - - - ) - + helios::Time const & t ) @@ -437,7 +425,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1_timer.html b/doc/html/structhelios_1_1_timer.html index 3c96503c7..6c63dcc57 100644 --- a/doc/html/structhelios_1_1_timer.html +++ b/doc/html/structhelios_1_1_timer.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions
    @@ -95,25 +107,25 @@
    -

    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration. - More...

    +

    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration. + More...

    #include <global.h>

    - + - + - +

    Public Member Functions

    void tic ()
    void tic ()
     Start timer.
     
    double toc () const
    double toc () const
     Stop timer and print elapsed time.
     
    double toc (const char *message) const
    double toc (const char *message) const
     Stop timer and print elapsed time and a user-defined message.
     

    Detailed Description

    -

    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration.

    +

    MATLAB-style timer. Call tic() to start timer, call toc() to stop timer and print duration.

    Definition at line 619 of file global.h.

    Constructor & Destructor Documentation

    @@ -129,7 +141,7 @@

    helios::Timer::Timer ( - ) + ) @@ -157,7 +169,7 @@

    void helios::Timer::tic ( - ) + ) @@ -186,7 +198,7 @@

    double helios::Timer::toc ( - ) + ) const @@ -215,8 +227,7 @@

    double helios::Timer::toc ( - const char *  - message) + const char * message) const @@ -240,7 +251,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1int2.html b/doc/html/structhelios_1_1int2.html index 08b622e12..bd91e0019 100644 --- a/doc/html/structhelios_1_1int2.html +++ b/doc/html/structhelios_1_1int2.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,58 +110,58 @@

    Vector of two elements of type 'int'. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     int2 ()
     int2 ()
     Default constructor.
     
     int2 (const std::vector< int > &v)
     int2 (const std::vector< int > &v)
     Construct int2 from a vector of ints.
     
     int2 (const int v[2])
     int2 (const int v[2])
     Construct int2 from an array of ints.
     
     int2 (int v0, int v1)
     int2 (int v0, int v1)
     Construct int2 from two ints.
     
    int2 operator+ (const int2 &a) const
    int2 operator+ (const int2 &a) const
     Add two int2 vectors.
     
    int2 & operator+= (const int2 &a)
    int2 & operator+= (const int2 &a)
     Increment int2 vector.
     
    int2 & operator-= (const int2 &a)
    int2 & operator-= (const int2 &a)
     Deccrement int2 vector.
     
    int2 operator- (const int2 &a) const
    int2 operator- (const int2 &a) const
     Subtract two int2 vectors.
     
    bool operator== (const int2 &a) const
    bool operator== (const int2 &a) const
     Equality for all elements.
     
    bool operator!= (const int2 &a) const
    bool operator!= (const int2 &a) const
     Inequality for all elements.
     
    int2 operator- () const
    int2 operator- () const
     Multiply each element by -1.
     
    - + - +

    Data Fields

    int x
    int x
     First element in vector.
     
    int y
    int y
     Second element in vector.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::int2 &vec)
    std::ostream & operator<< (std::ostream &os, const helios::int2 &vec)
     Write int2 to output stream.
     
    @@ -170,7 +182,7 @@

    helios::int2::int2 ( - ) + ) @@ -199,8 +211,7 @@

    helios::int2::int2 ( - const std::vector< int > &  - v) + const std::vector< int > & v) @@ -229,8 +240,7 @@

    helios::int2::int2 ( - const int  - v[2]) + const int v[2]) @@ -259,19 +269,12 @@

    helios::int2::int2 ( - int  - v0, + int v0, - int  - v1  - - - - ) - + int v1 ) @@ -300,8 +303,7 @@

    bool helios::int2::operator!= ( - const int2 &  - a) + const int2 & a) const @@ -330,8 +332,7 @@

    int2 helios::int2::operator+ ( - const int2 &  - a) + const int2 & a) const @@ -360,8 +361,7 @@

    int2 & helios::int2::operator+= ( - const int2 &  - a) + const int2 & a) @@ -390,7 +390,7 @@

    int2 helios::int2::operator- ( - ) + ) const @@ -419,8 +419,7 @@

    int2 helios::int2::operator- ( - const int2 &  - a) + const int2 & a) const @@ -449,8 +448,7 @@

    int2 & helios::int2::operator-= ( - const int2 &  - a) + const int2 & a) @@ -479,8 +477,7 @@

    bool helios::int2::operator== ( - const int2 &  - a) + const int2 & a) const @@ -497,7 +494,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -510,19 +507,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::int2 &  - vec  - - - - ) - + const helios::int2 & vec ) @@ -581,7 +571,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1int3.html b/doc/html/structhelios_1_1int3.html index 97e20b230..16185faf2 100644 --- a/doc/html/structhelios_1_1int3.html +++ b/doc/html/structhelios_1_1int3.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,61 +110,61 @@

    Vector of three elements of type 'int'. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     int3 ()
     int3 ()
     Default constructor.
     
     int3 (const std::vector< int > &v)
     int3 (const std::vector< int > &v)
     Construct int3 from a vector of ints.
     
     int3 (const int v[3])
     int3 (const int v[3])
     Construct int3 from an array of ints.
     
     int3 (int v0, int v1, int v2)
     int3 (int v0, int v1, int v2)
     Construct int3 from three ints.
     
    int3 operator+ (const int3 &a) const
    int3 operator+ (const int3 &a) const
     Add two int3 vectors.
     
    int3 & operator+= (const int3 &a)
    int3 & operator+= (const int3 &a)
     Increment int3 vector.
     
    int3 & operator-= (const int3 &a)
    int3 & operator-= (const int3 &a)
     Decrement int3 vector.
     
    int3 operator- (const int3 &a) const
    int3 operator- (const int3 &a) const
     Subtract two int3 vectors.
     
    bool operator== (const int3 &a) const
    bool operator== (const int3 &a) const
     Equality for all elements.
     
    bool operator!= (const int3 &a) const
    bool operator!= (const int3 &a) const
     Inequality for all elements.
     
    int3 operator- () const
    int3 operator- () const
     Multiply each element by -1.
     
    - + - + - +

    Data Fields

    int x
    int x
     First element in vector.
     
    int y
    int y
     Second element in vector.
     
    int z
    int z
     Third element in vector.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::int3 &vec)
    std::ostream & operator<< (std::ostream &os, const helios::int3 &vec)
     Write int3 to output stream.
     
    @@ -173,7 +185,7 @@

    helios::int3::int3 ( - ) + ) @@ -202,8 +214,7 @@

    helios::int3::int3 ( - const std::vector< int > &  - v) + const std::vector< int > & v) @@ -232,8 +243,7 @@

    helios::int3::int3 ( - const int  - v[3]) + const int v[3]) @@ -262,25 +272,17 @@

    helios::int3::int3 ( - int  - v0, + int v0, - int  - v1, + int v1, - int  - v2  - - - - ) - + int v2 ) @@ -309,8 +311,7 @@

    bool helios::int3::operator!= ( - const int3 &  - a) + const int3 & a) const @@ -339,8 +340,7 @@

    int3 helios::int3::operator+ ( - const int3 &  - a) + const int3 & a) const @@ -369,8 +369,7 @@

    int3 & helios::int3::operator+= ( - const int3 &  - a) + const int3 & a) @@ -399,7 +398,7 @@

    int3 helios::int3::operator- ( - ) + ) const @@ -428,8 +427,7 @@

    int3 helios::int3::operator- ( - const int3 &  - a) + const int3 & a) const @@ -458,8 +456,7 @@

    int3 & helios::int3::operator-= ( - const int3 &  - a) + const int3 & a) @@ -488,8 +485,7 @@

    bool helios::int3::operator== ( - const int3 &  - a) + const int3 & a) const @@ -506,7 +502,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -519,19 +515,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::int3 &  - vec  - - - - ) - + const helios::int3 & vec ) @@ -608,7 +597,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1int4.html b/doc/html/structhelios_1_1int4.html index fe322e8df..26e2763da 100644 --- a/doc/html/structhelios_1_1int4.html +++ b/doc/html/structhelios_1_1int4.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,64 +110,64 @@

    Vector of four elements of type 'int'. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

     int4 ()
     int4 ()
     Default constructor.
     
     int4 (const std::vector< int > &v)
     int4 (const std::vector< int > &v)
     Construct int3 from a vector of ints.
     
     int4 (const int v[3])
     int4 (const int v[3])
     Construct int4 from an array of ints.
     
     int4 (int v0, int v1, int v2, int v3)
     int4 (int v0, int v1, int v2, int v3)
     Construct int4 from four ints.
     
    int4 operator+ (const int4 &a) const
    int4 operator+ (const int4 &a) const
     Add two int4 vectors.
     
    int4 & operator+= (const int4 &a)
    int4 & operator+= (const int4 &a)
     Increment int4 vector.
     
    int4 & operator-= (const int4 &a)
    int4 & operator-= (const int4 &a)
     Decrement int4 vector.
     
    int4 operator- (const int4 &a) const
    int4 operator- (const int4 &a) const
     Subtract two int4 vectors.
     
    bool operator== (const int4 &a) const
    bool operator== (const int4 &a) const
     Equality for all elements.
     
    bool operator!= (const int4 &a) const
    bool operator!= (const int4 &a) const
     Inequality for all elements.
     
    int4 operator- () const
    int4 operator- () const
     Multiply each element by -1.
     
    - + - + - + - +

    Data Fields

    int x
    int x
     First element in vector.
     
    int y
    int y
     Second element in vector.
     
    int z
    int z
     Third element in vector.
     
    int w
    int w
     Fourth element in vector.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::int4 &vec)
    std::ostream & operator<< (std::ostream &os, const helios::int4 &vec)
     Write int4 to output stream.
     
    @@ -176,7 +188,7 @@

    helios::int4::int4 ( - ) + ) @@ -205,8 +217,7 @@

    helios::int4::int4 ( - const std::vector< int > &  - v) + const std::vector< int > & v) @@ -235,8 +246,7 @@

    helios::int4::int4 ( - const int  - v[3]) + const int v[3]) @@ -265,31 +275,22 @@

    helios::int4::int4 ( - int  - v0, + int v0, - int  - v1, + int v1, - int  - v2, + int v2, - int  - v3  - - - - ) - + int v3 ) @@ -318,8 +319,7 @@

    bool helios::int4::operator!= ( - const int4 &  - a) + const int4 & a) const @@ -348,8 +348,7 @@

    int4 helios::int4::operator+ ( - const int4 &  - a) + const int4 & a) const @@ -378,8 +377,7 @@

    int4 & helios::int4::operator+= ( - const int4 &  - a) + const int4 & a) @@ -408,7 +406,7 @@

    int4 helios::int4::operator- ( - ) + ) const @@ -437,8 +435,7 @@

    int4 helios::int4::operator- ( - const int4 &  - a) + const int4 & a) const @@ -467,8 +464,7 @@

    int4 & helios::int4::operator-= ( - const int4 &  - a) + const int4 & a) @@ -497,8 +493,7 @@

    bool helios::int4::operator== ( - const int4 &  - a) + const int4 & a) const @@ -515,7 +510,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -528,19 +523,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::int4 &  - vec  - - - - ) - + const helios::int4 & vec ) @@ -635,7 +623,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1vec2.html b/doc/html/structhelios_1_1vec2.html index e68c7c282..6029ffebc 100644 --- a/doc/html/structhelios_1_1vec2.html +++ b/doc/html/structhelios_1_1vec2.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,79 +110,79 @@

    Vector of two elements of type 'float'. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

    vec2 normalize ()
    vec2 normalize ()
     Normalize vector components such that the magnitude is unity.
     
    float magnitude () const
    float magnitude () const
     Compute the vector magnitude.
     
     vec2 ()
     vec2 ()
     Default constructor.
     
     vec2 (const std::vector< float > &v)
     vec2 (const std::vector< float > &v)
     Initialize vec2 using a vector of floats.
     
     vec2 (const float v[2])
     vec2 (const float v[2])
     Initialize vec2 using an array of floats.
     
     vec2 (float v0, float v1)
     vec2 (float v0, float v1)
     Initialize vec2 using two floats.
     
    float operator* (const vec2 &a) const
    float operator* (const vec2 &a) const
     Dot (scalar) product of two vec2 vectors.
     
    vec2 operator+ (const vec2 &a) const
    vec2 operator+ (const vec2 &a) const
     Sum of two vec2 vectors.
     
    vec2 & operator+= (const vec2 &a)
    vec2 & operator+= (const vec2 &a)
     Increment vec2 vector.
     
    vec2 & operator-= (const vec2 &a)
    vec2 & operator-= (const vec2 &a)
     Decrement vec2 vector.
     
    vec2 operator- (const vec2 &a) const
    vec2 operator- (const vec2 &a) const
     Difference of two vec2 vectors.
     
    vec2 operator* (float a) const
    vec2 operator* (float a) const
     Multiply each element by scalar (scalar is multiplied on right: vec2*a)
     
    vec2 operator/ (float a) const
    vec2 operator/ (float a) const
     Divide each element by scalar (scalar is divided on right: vec2/a)
     
    vec2 operator+ (float a) const
    vec2 operator+ (float a) const
     Add a scalar to each element (scalar is added on right: vec2+a)
     
    vec2 operator- (float a) const
    vec2 operator- (float a) const
     Subtract a scalar from each element (scalar is subtracted on right: vec2-a)
     
    bool operator== (const vec2 &a) const
    bool operator== (const vec2 &a) const
     check for equality of two vec2 vectors
     
    bool operator!= (const vec2 &a) const
    bool operator!= (const vec2 &a) const
     check for inequality of two vec2 vectors
     
    vec2 operator- () const
    vec2 operator- () const
     Multiply each element by -1.
     
    - + - +

    Data Fields

    float x
    float x
     First element in vector.
     
    float y
    float y
     Second element in vector.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::vec2 &vec)
    std::ostream & operator<< (std::ostream &os, const helios::vec2 &vec)
     Write vec2 to output stream.
     
    @@ -191,7 +203,7 @@

    helios::vec2::vec2 ( - ) + ) @@ -221,8 +233,7 @@

    helios::vec2::vec2 ( - const std::vector< float > &  - v) + const std::vector< float > & v) @@ -251,8 +262,7 @@

    helios::vec2::vec2 ( - const float  - v[2]) + const float v[2]) @@ -281,19 +291,12 @@

    helios::vec2::vec2 ( - float  - v0, + float v0, - float  - v1  - - - - ) - + float v1 ) @@ -322,13 +325,13 @@

    float helios::vec2::magnitude ( - ) + ) const -inline +inlinenodiscard

    @@ -352,7 +355,7 @@

    vec2 helios::vec2::normalize ( - ) + ) @@ -381,8 +384,7 @@

    bool helios::vec2::operator!= ( - const vec2 &  - a) + const vec2 & a) const @@ -411,8 +413,7 @@

    float helios::vec2::operator* ( - const vec2 &  - a) + const vec2 & a) const @@ -441,8 +442,7 @@

    vec2 helios::vec2::operator* ( - float  - a) + float a) const @@ -471,8 +471,7 @@

    vec2 helios::vec2::operator+ ( - const vec2 &  - a) + const vec2 & a) const @@ -501,8 +500,7 @@

    vec2 helios::vec2::operator+ ( - float  - a) + float a) const @@ -531,8 +529,7 @@

    vec2 & helios::vec2::operator+= ( - const vec2 &  - a) + const vec2 & a) @@ -561,7 +558,7 @@

    vec2 helios::vec2::operator- ( - ) + ) const @@ -590,8 +587,7 @@

    vec2 helios::vec2::operator- ( - const vec2 &  - a) + const vec2 & a) const @@ -620,8 +616,7 @@

    vec2 helios::vec2::operator- ( - float  - a) + float a) const @@ -650,8 +645,7 @@

    vec2 & helios::vec2::operator-= ( - const vec2 &  - a) + const vec2 & a) @@ -680,8 +674,7 @@

    vec2 helios::vec2::operator/ ( - float  - a) + float a) const @@ -710,8 +703,7 @@

    bool helios::vec2::operator== ( - const vec2 &  - a) + const vec2 & a) const @@ -728,7 +720,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -741,19 +733,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::vec2 &  - vec  - - - - ) - + const helios::vec2 & vec ) @@ -812,7 +797,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
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    diff --git a/doc/html/structhelios_1_1vec3.html b/doc/html/structhelios_1_1vec3.html index 9591964dc..53ffff7f1 100644 --- a/doc/html/structhelios_1_1vec3.html +++ b/doc/html/structhelios_1_1vec3.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,82 +110,82 @@

    Vector of three elements of type 'float'. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

    vec3 normalize ()
    vec3 normalize ()
     Normalize vector components such that the magnitude is unity.
     
    float magnitude () const
    float magnitude () const
     Compute the vector magnitude.
     
     vec3 ()
     vec3 ()
     Default constructor.
     
     vec3 (const std::vector< float > &v)
     vec3 (const std::vector< float > &v)
     Initialize vec3 using a vector of floats.
     
     vec3 (const float v[3])
     vec3 (const float v[3])
     Initialize vec3 using an array of floats.
     
     vec3 (float v0, float v1, float v2)
     vec3 (float v0, float v1, float v2)
     Initialize vec3 using three floats.
     
    float operator* (const vec3 &a) const
    float operator* (const vec3 &a) const
     Dot (scalar) product of two vec3 vectors.
     
    vec3 operator+ (const vec3 &a) const
    vec3 operator+ (const vec3 &a) const
     Sum of two vec3 vectors.
     
    vec3 & operator+= (const vec3 &a)
    vec3 & operator+= (const vec3 &a)
     Increment vec3 vector.
     
    vec3 & operator-= (const vec3 &a)
    vec3 & operator-= (const vec3 &a)
     Decrement vec3 vector.
     
    vec3 operator- (const vec3 &a) const
    vec3 operator- (const vec3 &a) const
     Difference of two vec3 vectors.
     
    vec3 operator* (float a) const
    vec3 operator* (float a) const
     Multiply each element by scalar (scalar is multiplied on right: vec3*a)
     
    vec3 operator/ (float a) const
    vec3 operator/ (float a) const
     Divide each element by scalar (scalar is divided on right: vec3/a)
     
    vec3 operator+ (float a) const
    vec3 operator+ (float a) const
     Add a scalar to each element (scalar is added on right: vec3+a)
     
    vec3 operator- (float a) const
    vec3 operator- (float a) const
     Subtract a scalar from each element (scalar is subtracted on right: vec3-a)
     
    bool operator== (const vec3 &a) const
    bool operator== (const vec3 &a) const
     check for equality of two vec3 vectors
     
    bool operator!= (const vec3 &a) const
    bool operator!= (const vec3 &a) const
     check for inequality of two vec3 vectors
     
    vec3 operator- () const
    vec3 operator- () const
     Multiply vector by -1.
     
    - + - + - +

    Data Fields

    float x
    float x
     First element in vector.
     
    float y
    float y
     Second element in vector.
     
    float z
    float z
     Third element in vector.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::vec3 &vec)
    std::ostream & operator<< (std::ostream &os, const helios::vec3 &vec)
     Write vec3 to output stream.
     
    @@ -194,7 +206,7 @@

    helios::vec3::vec3 ( - ) + ) @@ -224,8 +236,7 @@

    helios::vec3::vec3 ( - const std::vector< float > &  - v) + const std::vector< float > & v) @@ -254,8 +265,7 @@

    helios::vec3::vec3 ( - const float  - v[3]) + const float v[3]) @@ -284,25 +294,17 @@

    helios::vec3::vec3 ( - float  - v0, + float v0, - float  - v1, + float v1, - float  - v2  - - - - ) - + float v2 ) @@ -331,13 +333,13 @@

    float helios::vec3::magnitude ( - ) + ) const -inline +inlinenodiscard

    @@ -361,7 +363,7 @@

    vec3 helios::vec3::normalize ( - ) + ) @@ -390,8 +392,7 @@

    bool helios::vec3::operator!= ( - const vec3 &  - a) + const vec3 & a) const @@ -420,8 +421,7 @@

    float helios::vec3::operator* ( - const vec3 &  - a) + const vec3 & a) const @@ -450,8 +450,7 @@

    vec3 helios::vec3::operator* ( - float  - a) + float a) const @@ -480,8 +479,7 @@

    vec3 helios::vec3::operator+ ( - const vec3 &  - a) + const vec3 & a) const @@ -510,8 +508,7 @@

    vec3 helios::vec3::operator+ ( - float  - a) + float a) const @@ -540,8 +537,7 @@

    vec3 & helios::vec3::operator+= ( - const vec3 &  - a) + const vec3 & a) @@ -570,7 +566,7 @@

    vec3 helios::vec3::operator- ( - ) + ) const @@ -599,8 +595,7 @@

    vec3 helios::vec3::operator- ( - const vec3 &  - a) + const vec3 & a) const @@ -629,8 +624,7 @@

    vec3 helios::vec3::operator- ( - float  - a) + float a) const @@ -659,8 +653,7 @@

    vec3 & helios::vec3::operator-= ( - const vec3 &  - a) + const vec3 & a) @@ -689,8 +682,7 @@

    vec3 helios::vec3::operator/ ( - float  - a) + float a) const @@ -719,8 +711,7 @@

    bool helios::vec3::operator== ( - const vec3 &  - a) + const vec3 & a) const @@ -737,7 +728,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -750,19 +741,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::vec3 &  - vec  - - - - ) - + const helios::vec3 & vec ) @@ -839,7 +823,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structhelios_1_1vec4.html b/doc/html/structhelios_1_1vec4.html index e79ffffa2..7e2301ddf 100644 --- a/doc/html/structhelios_1_1vec4.html +++ b/doc/html/structhelios_1_1vec4.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    Public Member Functions | @@ -98,85 +110,85 @@

    Vector of four elements of type 'float'. - More...

    + More...

    #include <helios_vector_types.h>

    - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - +

    Public Member Functions

    vec4 normalize ()
    vec4 normalize ()
     Normalize vector components such that the magnitude is unity.
     
    float magnitude () const
    float magnitude () const
     Compute the vector magnitude.
     
     vec4 ()
     vec4 ()
     Default constructor.
     
     vec4 (const std::vector< float > &v)
     vec4 (const std::vector< float > &v)
     Initialize vec4 using a vector of floats.
     
     vec4 (const float v[4])
     vec4 (const float v[4])
     Initialize vec3 using an array of floats.
     
     vec4 (float v0, float v1, float v2, float v3)
     vec4 (float v0, float v1, float v2, float v3)
     Initialize vec4 using four floats.
     
    float operator* (const vec4 &a) const
    float operator* (const vec4 &a) const
     Dot (scalar) product of two vec4 vectors.
     
    vec4 operator+ (const vec4 &a) const
    vec4 operator+ (const vec4 &a) const
     Sum of two vec4 vectors.
     
    vec4 & operator+= (const vec4 &a)
    vec4 & operator+= (const vec4 &a)
     Increment vec4 vector.
     
    vec4 & operator-= (const vec4 &a)
    vec4 & operator-= (const vec4 &a)
     Decrement vec4 vector.
     
    vec4 operator- (const vec4 &a) const
    vec4 operator- (const vec4 &a) const
     Difference of two vec4 vectors.
     
    vec4 operator* (float a) const
    vec4 operator* (float a) const
     Multiply each element by scalar (scalar is multiplied on right: vec4*a)
     
    vec4 operator/ (float a) const
    vec4 operator/ (float a) const
     Divide each element by scalar (scalar is divided on right: vec4/a)
     
    vec4 operator+ (float a) const
    vec4 operator+ (float a) const
     Add a scalar to each element (scalar is added on right: vec4+a)
     
    vec4 operator- (float a) const
    vec4 operator- (float a) const
     Subtract a scalar from each element (scalar is subtracted on right: vec4-a)
     
    bool operator== (const vec4 &a) const
    bool operator== (const vec4 &a) const
     check for equality of two vec4 vectors
     
    bool operator!= (const vec4 &a) const
    bool operator!= (const vec4 &a) const
     check for equality of two vec4 vectors
     
    vec4 operator- () const
    vec4 operator- () const
     Multiply each element by -1.
     
    - + - + - + - +

    Data Fields

    float x
    float x
     First element in vector.
     
    float y
    float y
     Second element in vector.
     
    float z
    float z
     Third element in vector.
     
    float w
    float w
     Fourth element in vector.
     
    - +

    Friends

    std::ostream & operator<< (std::ostream &os, const helios::vec4 &vec)
    std::ostream & operator<< (std::ostream &os, const helios::vec4 &vec)
     Write vec4 to output stream.
     
    @@ -197,7 +209,7 @@

    helios::vec4::vec4 ( - ) + ) @@ -227,8 +239,7 @@

    helios::vec4::vec4 ( - const std::vector< float > &  - v) + const std::vector< float > & v) @@ -257,8 +268,7 @@

    helios::vec4::vec4 ( - const float  - v[4]) + const float v[4]) @@ -287,31 +297,22 @@

    helios::vec4::vec4 ( - float  - v0, + float v0, - float  - v1, + float v1, - float  - v2, + float v2, - float  - v3  - - - - ) - + float v3 ) @@ -340,13 +341,13 @@

    float helios::vec4::magnitude ( - ) + ) const -inline +inlinenodiscard

    @@ -370,7 +371,7 @@

    vec4 helios::vec4::normalize ( - ) + ) @@ -399,8 +400,7 @@

    bool helios::vec4::operator!= ( - const vec4 &  - a) + const vec4 & a) const @@ -429,8 +429,7 @@

    float helios::vec4::operator* ( - const vec4 &  - a) + const vec4 & a) const @@ -459,8 +458,7 @@

    vec4 helios::vec4::operator* ( - float  - a) + float a) const @@ -489,8 +487,7 @@

    vec4 helios::vec4::operator+ ( - const vec4 &  - a) + const vec4 & a) const @@ -519,8 +516,7 @@

    vec4 helios::vec4::operator+ ( - float  - a) + float a) const @@ -549,8 +545,7 @@

    vec4 & helios::vec4::operator+= ( - const vec4 &  - a) + const vec4 & a) @@ -579,7 +574,7 @@

    vec4 helios::vec4::operator- ( - ) + ) const @@ -608,8 +603,7 @@

    vec4 helios::vec4::operator- ( - const vec4 &  - a) + const vec4 & a) const @@ -638,8 +632,7 @@

    vec4 helios::vec4::operator- ( - float  - a) + float a) const @@ -668,8 +661,7 @@

    vec4 & helios::vec4::operator-= ( - const vec4 &  - a) + const vec4 & a) @@ -698,8 +690,7 @@

    vec4 helios::vec4::operator/ ( - float  - a) + float a) const @@ -728,8 +719,7 @@

    bool helios::vec4::operator== ( - const vec4 &  - a) + const vec4 & a) const @@ -746,7 +736,7 @@

    Friends And Related Function Documentation

    +

    Friends And Related Symbol Documentation

    ◆ operator<<

    @@ -759,19 +749,12 @@

    std::ostream & operator<< ( - std::ostream &  - os, + std::ostream & os, - const helios::vec4 &  - vec  - - - - ) - + const helios::vec4 & vec ) @@ -866,7 +849,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +

    diff --git a/doc/html/structjpg__error__mgr.html b/doc/html/structjpg__error__mgr.html index 39a82dcb4..eda44a86c 100644 --- a/doc/html/structjpg__error__mgr.html +++ b/doc/html/structjpg__error__mgr.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
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    Data Fields
    @@ -93,9 +105,9 @@ - + - +

    Data Fields

    struct jpeg_error_mgr pub
    struct jpeg_error_mgr pub
     
    jmp_buf setjmp_buffer
    jmp_buf setjmp_buffer
     

    Detailed Description

    @@ -140,7 +152,8 @@

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    diff --git a/doc/html/structmy__error__mgr.html b/doc/html/structmy__error__mgr.html index 2ce3cd8ed..565f50583 100644 --- a/doc/html/structmy__error__mgr.html +++ b/doc/html/structmy__error__mgr.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
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    struct jpeg_error_mgr pub
     
    jmp_buf setjmp_buffer
    jmp_buf setjmp_buffer
     

    Detailed Description

    @@ -140,7 +152,8 @@

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a{padding:10px 20px}.sm-dox.sm-vertical ul a:hover,.sm-dox.sm-vertical ul a:focus,.sm-dox.sm-vertical ul a:active,.sm-dox.sm-vertical ul a.highlighted{background:#eee}.sm-dox.sm-vertical ul a.disabled{background:white}} diff --git a/doc/html/tomato_8cpp_source.html b/doc/html/tomato_8cpp_source.html index e516d7f44..f11efd07e 100644 --- a/doc/html/tomato_8cpp_source.html +++ b/doc/html/tomato_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    tomato.cpp
    @@ -230,6 +242,7 @@
    136
    137}
    138
    +
    139uint CanopyGenerator::tomato(const TomatoParameters &params, const vec3 &origin ){
    140
    141 std::vector<std::vector<uint> > leaf_UUIDs;
    @@ -302,40 +315,42 @@
    208 return UUID_leaf.size()-1;
    209
    210}
    +
    -
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition: CanopyGenerator.cpp:3251
    -
    CanopyGenerator::tomato
    uint tomato(const TomatoParameters &params, const helios::vec3 &origin)
    Function to add an individual tomato plant.
    Definition: tomato.cpp:139
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition: Context.cpp:1178
    -
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition: Context.cpp:1420
    -
    helios::Context::addSphere
    std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
    Add a spherical compound object to the Context.
    Definition: Context.cpp:5646
    -
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition: Context.cpp:5930
    -
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition: Context.cpp:5809
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition: global.cpp:617
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    TomatoParameters
    Parameters defining the tomato plant canopy.
    Definition: CanopyGenerator.h:565
    -
    TomatoParameters::shoot_subdivisions
    int shoot_subdivisions
    Number of radial subdivisions for shoot tubes.
    Definition: CanopyGenerator.h:600
    -
    TomatoParameters::leaf_length
    float leaf_length
    Maximum width of leaves.
    Definition: CanopyGenerator.h:588
    -
    TomatoParameters::fruit_color
    helios::RGBcolor fruit_color
    Color of tomato fruit.
    Definition: CanopyGenerator.h:618
    -
    TomatoParameters::leaf_subdivisions
    helios::int2 leaf_subdivisions
    Number of sub-division segments per leaf.
    Definition: CanopyGenerator.h:591
    -
    TomatoParameters::fruit_subdivisions
    uint fruit_subdivisions
    Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
    Definition: CanopyGenerator.h:621
    -
    TomatoParameters::shoot_color
    helios::RGBcolor shoot_color
    Color of shoots.
    Definition: CanopyGenerator.h:597
    -
    TomatoParameters::leaf_texture_file
    std::string leaf_texture_file
    Path to texture map file for leaves.
    Definition: CanopyGenerator.h:594
    -
    TomatoParameters::plant_height
    float plant_height
    Height of the plant.
    Definition: CanopyGenerator.h:609
    -
    TomatoParameters::fruit_radius
    float fruit_radius
    Radius of tomato fruit.
    Definition: CanopyGenerator.h:615
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    +
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition CanopyGenerator.cpp:3251
    +
    CanopyGenerator::tomato
    uint tomato(const TomatoParameters &params, const helios::vec3 &origin)
    Function to add an individual tomato plant.
    Definition tomato.cpp:139
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::randu
    float randu()
    Draw a random number from a uniform distribution between 0 and 1.
    Definition Context.cpp:1178
    +
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition Context.cpp:1420
    +
    helios::Context::addSphere
    std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
    Add a spherical compound object to the Context.
    Definition Context.cpp:5646
    +
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition Context.cpp:5930
    +
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition Context.cpp:5809
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::sphere2cart
    vec3 sphere2cart(const SphericalCoord &Spherical)
    Convert Spherical coordinates to Cartesian coordinates.
    Definition global.cpp:617
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    TomatoParameters
    Parameters defining the tomato plant canopy.
    Definition CanopyGenerator.h:565
    +
    TomatoParameters::shoot_subdivisions
    int shoot_subdivisions
    Number of radial subdivisions for shoot tubes.
    Definition CanopyGenerator.h:600
    +
    TomatoParameters::leaf_length
    float leaf_length
    Maximum width of leaves.
    Definition CanopyGenerator.h:588
    +
    TomatoParameters::fruit_color
    helios::RGBcolor fruit_color
    Color of tomato fruit.
    Definition CanopyGenerator.h:618
    +
    TomatoParameters::leaf_subdivisions
    helios::int2 leaf_subdivisions
    Number of sub-division segments per leaf.
    Definition CanopyGenerator.h:591
    +
    TomatoParameters::fruit_subdivisions
    uint fruit_subdivisions
    Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
    Definition CanopyGenerator.h:621
    +
    TomatoParameters::shoot_color
    helios::RGBcolor shoot_color
    Color of shoots.
    Definition CanopyGenerator.h:597
    +
    TomatoParameters::leaf_texture_file
    std::string leaf_texture_file
    Path to texture map file for leaves.
    Definition CanopyGenerator.h:594
    +
    TomatoParameters::plant_height
    float plant_height
    Height of the plant.
    Definition CanopyGenerator.h:609
    +
    TomatoParameters::fruit_radius
    float fruit_radius
    Radius of tomato fruit.
    Definition CanopyGenerator.h:615
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/usergroup0.html b/doc/html/usergroup0.html index cc9b87b51..b77bdceb2 100644 --- a/doc/html/usergroup0.html +++ b/doc/html/usergroup0.html @@ -38,31 +38,43 @@ Logo -
     v1.3.25 +
     v1.3.26
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    diff --git a/doc/html/visualizer_basics.html b/doc/html/visualizer_basics.html index 9abb6e3ce..e75deb631 100644 --- a/doc/html/visualizer_basics.html +++ b/doc/html/visualizer_basics.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    -
    Tutorial 7: Visualizer Basics
    +
    Tutorial 7: Visualizer Basics

    In this tutorial, we will explain in more depth the use of the Visualizer plug-in functions that were shown in previous tutorials. Users are strongly encouraged to read through the detailed Visualizer Plugin Documentation.

    @@ -172,7 +184,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/visualizer_pdata.html b/doc/html/visualizer_pdata.html index 5c6fd26e6..b6e9ae0fb 100644 --- a/doc/html/visualizer_pdata.html +++ b/doc/html/visualizer_pdata.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    -
    Tutorial 8: Visualizing primitive data values
    +
    Tutorial 8: Visualizing primitive data values

    This tutorial will illustrate how to use the Helios visualizer to visualize primitive data based on a pseudocolor mapping. The code below gives a main.cpp file that loads in a 3D model, sets primitive data for each primitive in the model, and creates a pseudocolor mapping to visualize the primitive data distribution.

    @@ -143,7 +155,8 @@

    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/walnut_8cpp_source.html b/doc/html/walnut_8cpp_source.html index 3c665aba9..acddc98dc 100644 --- a/doc/html/walnut_8cpp_source.html +++ b/doc/html/walnut_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
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    walnut.cpp
    @@ -424,6 +436,7 @@
    330
    331
    332
    +
    333uint CanopyGenerator::walnut(const WalnutCanopyParameters &params, const vec3 &origin ){
    334
    335 std::vector<uint> leaf_prototype = leafPrototype( params, generator, context );
    @@ -460,55 +473,57 @@
    366 return UUID_leaf.size()-1;
    367
    368}
    +
    -
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition: CanopyGenerator.cpp:3251
    -
    getVariation
    float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
    Draw a random number (float) from a uniform distribution between -V and V.
    Definition: CanopyGenerator.cpp:3004
    -
    CanopyGenerator::walnut
    uint walnut(const WalnutCanopyParameters &params, const helios::vec3 &origin)
    Function to add an individual walnut tree.
    Definition: walnut.cpp:333
    -
    helios::CompoundObject::getPrimitiveUUIDs
    std::vector< uint > getPrimitiveUUIDs() const
    Get the UUIDs for all primitives contained in the object.
    Definition: Context.cpp:2256
    -
    helios::Context
    Stores the state associated with simulation.
    Definition: Context.h:1882
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition: Context.cpp:1536
    -
    helios::Context::getObjectPointer
    CompoundObject * getObjectPointer(uint ObjID) const
    Get a pointer to a Compound Object.
    Definition: Context.cpp:2574
    -
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition: Context.cpp:1420
    -
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition: Context.cpp:1578
    -
    helios::Context::scalePrimitive
    void scalePrimitive(uint UUID, const helios::vec3 &S)
    Scale a primitive using its UUID relative to the origin (0,0,0)
    Definition: Context.cpp:1491
    -
    helios::Context::getTubeObjectPointer
    Tube * getTubeObjectPointer(uint ObjID) const
    Get a pointer to a Tube Compound Object.
    Definition: Context.cpp:3486
    -
    helios::Tube::getNodeRadii
    std::vector< float > getNodeRadii() const
    Get the radius at each of the tube object nodes.
    Definition: Context.cpp:3508
    -
    helios::Tube::getNodes
    std::vector< helios::vec3 > getNodes() const
    Get the Cartesian coordinates of each of the tube object nodes.
    Definition: Context.cpp:3493
    -
    helios::rotatePointAboutLine
    vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    Rotate a 3D vector about an arbitrary line.
    Definition: global.cpp:140
    -
    helios::Context::addTubeObject
    uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition: Context.cpp:4728
    -
    helios::Context::addSphere
    std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
    Add a spherical compound object to the Context.
    Definition: Context.cpp:5646
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition: global.cpp:2768
    -
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition: Context.cpp:1328
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition: helios_vector_types.h:599
    -
    WalnutCanopyParameters
    Parameters defining the walnut tree canopy.
    Definition: CanopyGenerator.h:696
    -
    WalnutCanopyParameters::wood_subdivisions
    int wood_subdivisions
    Number of radial subdivisions for branch tubes.
    Definition: CanopyGenerator.h:731
    -
    WalnutCanopyParameters::fruit_texture_file
    std::string fruit_texture_file
    Texture map for walnut fruit.
    Definition: CanopyGenerator.h:753
    -
    WalnutCanopyParameters::leaf_subdivisions
    helios::int2 leaf_subdivisions
    Number of sub-division segments per leaf.
    Definition: CanopyGenerator.h:722
    -
    WalnutCanopyParameters::fruit_subdivisions
    uint fruit_subdivisions
    Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
    Definition: CanopyGenerator.h:756
    -
    WalnutCanopyParameters::trunk_radius
    float trunk_radius
    Radius of trunk.
    Definition: CanopyGenerator.h:734
    -
    WalnutCanopyParameters::fruit_radius
    float fruit_radius
    Radius of walnuts.
    Definition: CanopyGenerator.h:750
    -
    WalnutCanopyParameters::leaf_texture_file
    std::string leaf_texture_file
    Path to texture map file for leaves.
    Definition: CanopyGenerator.h:725
    -
    WalnutCanopyParameters::leaf_length
    float leaf_length
    Maximum length of leaves along midrib.
    Definition: CanopyGenerator.h:719
    -
    WalnutCanopyParameters::wood_texture_file
    std::string wood_texture_file
    Path to texture map file for wood/branches.
    Definition: CanopyGenerator.h:728
    -
    WalnutCanopyParameters::branch_length
    helios::vec3 branch_length
    Average length of branches in each recursive branch level. For example, the first (....
    Definition: CanopyGenerator.h:740
    -
    WalnutCanopyParameters::trunk_height
    float trunk_height
    Height of the trunk.
    Definition: CanopyGenerator.h:737
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::int2::y
    int y
    Second element in vector.
    Definition: helios_vector_types.h:50
    -
    helios::int2::x
    int x
    First element in vector.
    Definition: helios_vector_types.h:48
    -
    helios::vec2
    Vector of two elements of type 'float'.
    Definition: helios_vector_types.h:346
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    -
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition: helios_vector_types.h:514
    -
    helios::vec3::x
    float x
    First element in vector.
    Definition: helios_vector_types.h:507
    -
    helios::vec3::z
    float z
    Third element in vector.
    Definition: helios_vector_types.h:511
    -
    helios::vec3::y
    float y
    Second element in vector.
    Definition: helios_vector_types.h:509
    +
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition CanopyGenerator.cpp:3251
    +
    getVariation
    float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
    Draw a random number (float) from a uniform distribution between -V and V.
    Definition CanopyGenerator.cpp:3004
    +
    CanopyGenerator::walnut
    uint walnut(const WalnutCanopyParameters &params, const helios::vec3 &origin)
    Function to add an individual walnut tree.
    Definition walnut.cpp:333
    +
    helios::CompoundObject::getPrimitiveUUIDs
    std::vector< uint > getPrimitiveUUIDs() const
    Get the UUIDs for all primitives contained in the object.
    Definition Context.cpp:2256
    +
    helios::Context
    Stores the state associated with simulation.
    Definition Context.h:1882
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::deletePrimitive
    void deletePrimitive(uint UUID)
    Delete a single primitive from the context.
    Definition Context.cpp:1536
    +
    helios::Context::getObjectPointer
    CompoundObject * getObjectPointer(uint ObjID) const
    Get a pointer to a Compound Object.
    Definition Context.cpp:2574
    +
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition Context.cpp:1420
    +
    helios::Context::copyPrimitive
    uint copyPrimitive(uint UUID)
    Make a copy of a primitive from the context.
    Definition Context.cpp:1578
    +
    helios::Context::scalePrimitive
    void scalePrimitive(uint UUID, const helios::vec3 &S)
    Scale a primitive using its UUID relative to the origin (0,0,0)
    Definition Context.cpp:1491
    +
    helios::Context::getTubeObjectPointer
    Tube * getTubeObjectPointer(uint ObjID) const
    Get a pointer to a Tube Compound Object.
    Definition Context.cpp:3486
    +
    helios::Tube::getNodeRadii
    std::vector< float > getNodeRadii() const
    Get the radius at each of the tube object nodes.
    Definition Context.cpp:3508
    +
    helios::Tube::getNodes
    std::vector< helios::vec3 > getNodes() const
    Get the Cartesian coordinates of each of the tube object nodes.
    Definition Context.cpp:3493
    +
    helios::rotatePointAboutLine
    vec3 rotatePointAboutLine(const vec3 &point, const vec3 &line_base, const vec3 &line_direction, float theta)
    Rotate a 3D vector about an arbitrary line.
    Definition global.cpp:140
    +
    helios::Context::addTubeObject
    uint addTubeObject(uint radial_subdivisions, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition Context.cpp:4728
    +
    helios::Context::addSphere
    std::vector< uint > addSphere(uint Ndivs, const vec3 &center, float radius)
    Add a spherical compound object to the Context.
    Definition Context.cpp:5646
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::spline_interp3
    helios::vec3 spline_interp3(float u, const vec3 &x_start, const vec3 &tan_start, const vec3 &x_end, const vec3 &tan_end)
    Function to perform cubic Hermite spline interpolation.
    Definition global.cpp:2768
    +
    helios::Context::addTriangle
    uint addTriangle(const helios::vec3 &vertex0, const helios::vec3 &vertex1, const helios::vec3 &vertex2)
    Add new Triangle geometric primitive.
    Definition Context.cpp:1328
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::cross
    vec3 cross(const vec3 &a, const vec3 &b)
    Cross product of two vec3 vectors.
    Definition helios_vector_types.h:599
    +
    WalnutCanopyParameters
    Parameters defining the walnut tree canopy.
    Definition CanopyGenerator.h:696
    +
    WalnutCanopyParameters::wood_subdivisions
    int wood_subdivisions
    Number of radial subdivisions for branch tubes.
    Definition CanopyGenerator.h:731
    +
    WalnutCanopyParameters::fruit_texture_file
    std::string fruit_texture_file
    Texture map for walnut fruit.
    Definition CanopyGenerator.h:753
    +
    WalnutCanopyParameters::leaf_subdivisions
    helios::int2 leaf_subdivisions
    Number of sub-division segments per leaf.
    Definition CanopyGenerator.h:722
    +
    WalnutCanopyParameters::fruit_subdivisions
    uint fruit_subdivisions
    Number of azimuthal and zenithal subdivisions making up fruit (will result in roughly fruit_subdivisi...
    Definition CanopyGenerator.h:756
    +
    WalnutCanopyParameters::trunk_radius
    float trunk_radius
    Radius of trunk.
    Definition CanopyGenerator.h:734
    +
    WalnutCanopyParameters::fruit_radius
    float fruit_radius
    Radius of walnuts.
    Definition CanopyGenerator.h:750
    +
    WalnutCanopyParameters::leaf_texture_file
    std::string leaf_texture_file
    Path to texture map file for leaves.
    Definition CanopyGenerator.h:725
    +
    WalnutCanopyParameters::leaf_length
    float leaf_length
    Maximum length of leaves along midrib.
    Definition CanopyGenerator.h:719
    +
    WalnutCanopyParameters::wood_texture_file
    std::string wood_texture_file
    Path to texture map file for wood/branches.
    Definition CanopyGenerator.h:728
    +
    WalnutCanopyParameters::branch_length
    helios::vec3 branch_length
    Average length of branches in each recursive branch level. For example, the first (....
    Definition CanopyGenerator.h:740
    +
    WalnutCanopyParameters::trunk_height
    float trunk_height
    Height of the trunk.
    Definition CanopyGenerator.h:737
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::int2::y
    int y
    Second element in vector.
    Definition helios_vector_types.h:50
    +
    helios::int2::x
    int x
    First element in vector.
    Definition helios_vector_types.h:48
    +
    helios::vec2
    Vector of two elements of type 'float'.
    Definition helios_vector_types.h:346
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    +
    helios::vec3::normalize
    vec3 normalize()
    Normalize vector components such that the magnitude is unity.
    Definition helios_vector_types.h:514
    +
    helios::vec3::x
    float x
    First element in vector.
    Definition helios_vector_types.h:507
    +
    helios::vec3::z
    float z
    Third element in vector.
    Definition helios_vector_types.h:511
    +
    helios::vec3::y
    float y
    Second element in vector.
    Definition helios_vector_types.h:509
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/doc/html/whitespruce_8cpp_source.html b/doc/html/whitespruce_8cpp_source.html index 74ba2bc76..5b3813983 100644 --- a/doc/html/whitespruce_8cpp_source.html +++ b/doc/html/whitespruce_8cpp_source.html @@ -38,30 +38,41 @@ Logo -
     v1.3.25 +
     v1.3.26
    - + + + +
    +
    whitespruce.cpp
    @@ -97,6 +109,7 @@
    3using namespace helios;
    4using namespace std;
    5
    +
    6uint CanopyGenerator::whitespruce(const WhiteSpruceCanopyParameters &params, const vec3 &origin ){
    7
    8 vector<uint> U;
    @@ -243,39 +256,41 @@
    149 return UUID_leaf.size()-1;
    150
    151}
    +
    -
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition: CanopyGenerator.cpp:3251
    -
    getVariation
    float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
    Draw a random number (float) from a uniform distribution between -V and V.
    Definition: CanopyGenerator.cpp:3004
    -
    CanopyGenerator::whitespruce
    uint whitespruce(const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
    Function to add an individual white spruce tree.
    Definition: whitespruce.cpp:6
    -
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition: Context.cpp:1406
    -
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition: Context.cpp:1420
    -
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition: Context.cpp:5930
    -
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition: Context.cpp:5809
    -
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition: global.cpp:610
    -
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition: helios_vector_types.h:433
    -
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition: helios_vector_types.h:589
    -
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition: helios_vector_types.h:1602
    -
    WhiteSpruceCanopyParameters
    Parameters defining the white spruce.
    Definition: CanopyGenerator.h:489
    -
    WhiteSpruceCanopyParameters::needle_subdivisions
    helios::int2 needle_subdivisions
    Number of sub-division segments per needle.
    Definition: CanopyGenerator.h:518
    -
    WhiteSpruceCanopyParameters::wood_texture_file
    std::string wood_texture_file
    Path to texture map file for trunks/branches.
    Definition: CanopyGenerator.h:524
    -
    WhiteSpruceCanopyParameters::needle_length
    float needle_length
    Length of needles.
    Definition: CanopyGenerator.h:515
    -
    WhiteSpruceCanopyParameters::trunk_height
    float trunk_height
    Distance between the ground and top of trunks.
    Definition: CanopyGenerator.h:530
    -
    WhiteSpruceCanopyParameters::level_spacing
    float level_spacing
    Vertical spacing between branching levels.
    Definition: CanopyGenerator.h:545
    -
    WhiteSpruceCanopyParameters::shoot_radius
    float shoot_radius
    Radius of shoot branches.
    Definition: CanopyGenerator.h:542
    -
    WhiteSpruceCanopyParameters::wood_subdivisions
    int wood_subdivisions
    Number of radial subdivisions for trunk/cordon/shoot tubes.
    Definition: CanopyGenerator.h:527
    -
    WhiteSpruceCanopyParameters::base_height
    float base_height
    Height at which branches start.
    Definition: CanopyGenerator.h:536
    -
    WhiteSpruceCanopyParameters::crown_radius
    float crown_radius
    Radius of the crown at the base.
    Definition: CanopyGenerator.h:539
    -
    WhiteSpruceCanopyParameters::needle_color
    helios::RGBcolor needle_color
    Color of needles.
    Definition: CanopyGenerator.h:521
    -
    WhiteSpruceCanopyParameters::trunk_radius
    float trunk_radius
    Radius of the trunk at the base.
    Definition: CanopyGenerator.h:533
    -
    WhiteSpruceCanopyParameters::branches_per_level
    int branches_per_level
    Number of primary branches on the bottom level.
    Definition: CanopyGenerator.h:548
    -
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition: helios_vector_types.h:1534
    -
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition: helios_vector_types.h:1548
    -
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition: helios_vector_types.h:1555
    -
    helios::vec3
    Vector of three elements of type 'float'.
    Definition: helios_vector_types.h:503
    +
    interpolateTube
    helios::vec3 interpolateTube(const std::vector< helios::vec3 > &P, float frac)
    Interpolate the position of a point along a tube.
    Definition CanopyGenerator.cpp:3251
    +
    getVariation
    float getVariation(float V, std::minstd_rand0 &generator, bool positive=false)
    Draw a random number (float) from a uniform distribution between -V and V.
    Definition CanopyGenerator.cpp:3004
    +
    CanopyGenerator::whitespruce
    uint whitespruce(const WhiteSpruceCanopyParameters &params, const helios::vec3 &origin)
    Function to add an individual white spruce tree.
    Definition whitespruce.cpp:6
    +
    helios::Context::translatePrimitive
    void translatePrimitive(uint UUID, const vec3 &shift)
    Translate a primitive using its UUID.
    Definition Context.cpp:1406
    +
    helios::Context::rotatePrimitive
    void rotatePrimitive(uint UUID, float rot, const char *axis)
    Rotate a primitive about the x, y, or z axis using its UUID.
    Definition Context.cpp:1420
    +
    helios::Context::addTube
    std::vector< uint > addTube(uint Ndivs, const std::vector< vec3 > &nodes, const std::vector< float > &radius)
    Add a 3D tube compound object to the Context.
    Definition Context.cpp:5930
    +
    helios::Context::addTile
    std::vector< uint > addTile(const vec3 &center, const vec2 &size, const SphericalCoord &rotation, const int2 &subdiv)
    Add a patch that is subdivided into a regular grid of sub-patches (tiled)
    Definition Context.cpp:5809
    +
    helios::cart2sphere
    SphericalCoord cart2sphere(const vec3 &Cartesian)
    Convert Cartesian coordinates to spherical coordinates.
    Definition global.cpp:610
    +
    helios::make_vec2
    vec2 make_vec2(float x, float y)
    Make a vec2 from two floats.
    Definition helios_vector_types.h:433
    +
    helios::make_vec3
    vec3 make_vec3(float x, float y, float z)
    Make a vec3 from three floats.
    Definition helios_vector_types.h:589
    +
    helios::make_SphericalCoord
    SphericalCoord make_SphericalCoord(float elevation_radians, float azimuth_radians)
    Make a SphericalCoord by specifying elevation and azimuth.
    Definition helios_vector_types.h:1602
    +
    WhiteSpruceCanopyParameters
    Parameters defining the white spruce.
    Definition CanopyGenerator.h:489
    +
    WhiteSpruceCanopyParameters::needle_subdivisions
    helios::int2 needle_subdivisions
    Number of sub-division segments per needle.
    Definition CanopyGenerator.h:518
    +
    WhiteSpruceCanopyParameters::wood_texture_file
    std::string wood_texture_file
    Path to texture map file for trunks/branches.
    Definition CanopyGenerator.h:524
    +
    WhiteSpruceCanopyParameters::needle_length
    float needle_length
    Length of needles.
    Definition CanopyGenerator.h:515
    +
    WhiteSpruceCanopyParameters::trunk_height
    float trunk_height
    Distance between the ground and top of trunks.
    Definition CanopyGenerator.h:530
    +
    WhiteSpruceCanopyParameters::level_spacing
    float level_spacing
    Vertical spacing between branching levels.
    Definition CanopyGenerator.h:545
    +
    WhiteSpruceCanopyParameters::shoot_radius
    float shoot_radius
    Radius of shoot branches.
    Definition CanopyGenerator.h:542
    +
    WhiteSpruceCanopyParameters::wood_subdivisions
    int wood_subdivisions
    Number of radial subdivisions for trunk/cordon/shoot tubes.
    Definition CanopyGenerator.h:527
    +
    WhiteSpruceCanopyParameters::base_height
    float base_height
    Height at which branches start.
    Definition CanopyGenerator.h:536
    +
    WhiteSpruceCanopyParameters::crown_radius
    float crown_radius
    Radius of the crown at the base.
    Definition CanopyGenerator.h:539
    +
    WhiteSpruceCanopyParameters::needle_color
    helios::RGBcolor needle_color
    Color of needles.
    Definition CanopyGenerator.h:521
    +
    WhiteSpruceCanopyParameters::trunk_radius
    float trunk_radius
    Radius of the trunk at the base.
    Definition CanopyGenerator.h:533
    +
    WhiteSpruceCanopyParameters::branches_per_level
    int branches_per_level
    Number of primary branches on the bottom level.
    Definition CanopyGenerator.h:548
    +
    helios::SphericalCoord
    Vector of spherical coordinates (elevation,azimuth)
    Definition helios_vector_types.h:1534
    +
    helios::SphericalCoord::elevation
    const float & elevation
    Elevation angle (radians)
    Definition helios_vector_types.h:1548
    +
    helios::SphericalCoord::azimuth
    float azimuth
    Azimuthal angle (radians)
    Definition helios_vector_types.h:1555
    +
    helios::vec3
    Vector of three elements of type 'float'.
    Definition helios_vector_types.h:503
    -Generated by doxygen 1.9.6 +Generated by doxygen 1.12.0
    +
    diff --git a/plugins/plantarchitecture/doc/PlantArchitecture.dox b/plugins/plantarchitecture/doc/PlantArchitecture.dox index a4f00ac80..9155a8f48 100755 --- a/plugins/plantarchitecture/doc/PlantArchitecture.dox +++ b/plugins/plantarchitecture/doc/PlantArchitecture.dox @@ -303,7 +303,7 @@ The table below lists the parameters that define the geometry of the phytomer, a | --- **internode** --- |||| | pitch | RandomParameter_float | degrees | Angle of the phytomer internode with respect to the previous phytomer along the shoot. Setting this >0 creates a zig-zag shoot. | | phyllotactic_angle | RandomParameter_float | degrees | Angle between the petioles/buds of two successive phytomers along the shoot. See this page for more information on phyllotaxis. | -| radius_initial | RandomParameter_float | 0.001 | meters | Initial radius of the internode when it is created. | +| radius_initial | RandomParameter_float | meters | Initial radius of the internode when it is created. | | max_vegetative_buds_per_petiole | RandomParameter_int | - | Maximum number of possible vegetative nodes per petiole. Some of these buds may not break depending on the vegetative bud break probability. | | max_floral_buds_per_petiole | RandomParameter_int | - | Maximum number of possible floral nodes per petiole. Some of these buds may not break depending on the flower bud break probability. | | color | helios::RGBcolor | - | Diffuse color of the internode tube. | diff --git a/plugins/plantarchitecture/include/PlantArchitecture.h b/plugins/plantarchitecture/include/PlantArchitecture.h index 85fc82d14..cabadd5db 100644 --- a/plugins/plantarchitecture/include/PlantArchitecture.h +++ b/plugins/plantarchitecture/include/PlantArchitecture.h @@ -1409,6 +1409,43 @@ class PlantArchitecture{ */ float sumPlantLeafArea(uint plantID) const; + //! Calculate the height of the last internode on the base stem/shoot + /** + * \param[in] plantID ID of the plant instance. + * \return Height of the last internode on the base stem/shoot. + */ + float getPlantStemHeight(uint plantID) const; + + //! Calculate the height of the highest element in the plant + /** + * \param[in] plantID ID of the plant instance. + * \return Height of the highest element in the plant. + */ + float getPlantHeight(uint plantID) const; + + //! Calculate the leaf angle distribution of all leaves in the plant. + /** + * \param[in] plantID ID of the plant instance. + * \param[in] Nbins Number of bins for the histogram. + * \param[in] normalize [OPTIONAL] Normalize the histogram to integrate to 1. + * \return Histogram of leaf inclination angles. Bins are evenly spaced between 0 and 90 degrees. + */ + std::vector getPlantLeafInclinationAngleDistribution(uint plantID, uint Nbins, bool normalize=false) const; + + //! Get the total number of leaves on the plant + /** + * \param[in] plantID ID of the plant instance. + * \return Total number of leaves on the plant. + */ + uint getPlantLeafCount(uint plantID) const; + + //! Write all vertices in the plant to a file for external processing (e.g., bounding volume, convex hull) + /** + * \param[in] plantID ID of the plant instance. + * \param[in] filename Name/path of the output file. + */ + void writePlantMeshVertices(uint plantID, const std::string &filename) const; + //! Get object IDs for all organs objects for a given plant /** * \param[in] plantID ID of the plant instance. diff --git a/plugins/plantarchitecture/src/PlantArchitecture.cpp b/plugins/plantarchitecture/src/PlantArchitecture.cpp index e610c0bdc..35b109a5d 100644 --- a/plugins/plantarchitecture/src/PlantArchitecture.cpp +++ b/plugins/plantarchitecture/src/PlantArchitecture.cpp @@ -2237,7 +2237,7 @@ helios::vec3 PlantArchitecture::getPlantBasePosition(uint plantID) const{ float PlantArchitecture::sumPlantLeafArea(uint plantID) const{ - if( plantID>=plant_instances.size() ){ + if( plant_instances.find(plantID) == plant_instances.end() ){ helios_runtime_error("ERROR (PlantArchitecture::sumPlantLeafArea): Plant with ID of " + std::to_string(plantID) + " does not exist."); } @@ -2251,6 +2251,123 @@ float PlantArchitecture::sumPlantLeafArea(uint plantID) const{ return area; } +float PlantArchitecture::getPlantStemHeight(uint plantID) const { + + if( plant_instances.find(plantID) == plant_instances.end() ){ + helios_runtime_error("ERROR (PlantArchitecture::getPlantStemHeight): Plant with ID of " + std::to_string(plantID) + " does not exist."); + } + + auto base_shoot_ptr = plant_instances.at(plantID).shoot_tree.front(); + + std::vector stem_objID{base_shoot_ptr->internode_tube_objID}; + + if( !context_ptr->doesObjectExist(stem_objID.front()) ){ + helios_runtime_error("ERROR (PlantArchitecture::getPlantStemHeight): The plant does not contain any geometry."); + } + + //check if there was an appended shoot on this same shoot + if ( base_shoot_ptr->childIDs.find(base_shoot_ptr->current_node_number-1) != base_shoot_ptr->childIDs.end() ) { + auto terminal_children = base_shoot_ptr->childIDs.at(base_shoot_ptr->current_node_number-1); + for ( uint childID : terminal_children ) { + auto child_shoot_ptr = plant_instances.at(plantID).shoot_tree.at(childID); + if ( child_shoot_ptr->rank == base_shoot_ptr->rank ) { + if ( context_ptr->doesObjectExist(child_shoot_ptr->internode_tube_objID)) { + stem_objID.push_back(child_shoot_ptr->internode_tube_objID); + } + } + } + + } + + vec3 min_box; + vec3 max_box; + context_ptr->getObjectBoundingBox( stem_objID, min_box, max_box); + + return max_box.z - min_box.z; + +} + + +float PlantArchitecture::getPlantHeight(uint plantID) const{ + + if( plant_instances.find(plantID) == plant_instances.end() ) { + helios_runtime_error("ERROR (PlantArchitecture::getPlantHeight): Plant with ID of " + std::to_string(plantID) + " does not exist."); + } + + vec3 min_box; + vec3 max_box; + context_ptr->getObjectBoundingBox(getAllPlantObjectIDs(plantID), min_box, max_box); + + return max_box.z - min_box.z; + +} + +std::vector PlantArchitecture::getPlantLeafInclinationAngleDistribution(uint plantID, uint Nbins, bool normalize) const { + + if( plant_instances.find(plantID) == plant_instances.end() ){ + helios_runtime_error("ERROR (PlantArchitecture::getPlantLeafInclinationAngleDistribution): Plant with ID of " + std::to_string(plantID) + " does not exist."); + } + + std::vector leaf_objIDs = getPlantLeafObjectIDs(plantID); + std::vector leaf_UUIDs = context_ptr->getObjectPrimitiveUUIDs(leaf_objIDs); + + std::vector leaf_inclination_angles(Nbins); + float dtheta = 0.5f * PI_F / float(Nbins); + for( uint UUID : leaf_UUIDs ){ + vec3 normal = context_ptr->getPrimitiveNormal(UUID); + float theta = acos_safe(fabs(normal.z)); + uint bin = uint( std::floor(theta / dtheta) ); + leaf_inclination_angles.at(bin)++; + } + + if( normalize ){ + float sum = helios::sum(leaf_inclination_angles); + for( float &angle : leaf_inclination_angles ){ + angle /= sum; + } + } + + return leaf_inclination_angles; + +} + + +uint PlantArchitecture::getPlantLeafCount(uint plantID) const { + + if( plant_instances.find(plantID) == plant_instances.end() ){ + helios_runtime_error("ERROR (PlantArchitecture::getPlantLeafCount): Plant with ID of " + std::to_string(plantID) + " does not exist."); + } + + return getPlantLeafObjectIDs(plantID).size(); + +} + +void PlantArchitecture::writePlantMeshVertices(uint plantID, const std::string &filename) const{ + + if( plant_instances.find(plantID) == plant_instances.end() ){ + helios_runtime_error("ERROR (PlantArchitecture::writePlantMeshVertices): Plant with ID of " + std::to_string(plantID) + " does not exist."); + } + + std::vector plant_UUIDs = getAllPlantUUIDs(plantID); + + std::ofstream file; + file.open(filename); + + if( !file.is_open() ){ + helios_runtime_error("ERROR (PlantArchitecture::writePlantMeshVertices): Could not open file " + filename + " for writing."); + } + + for( uint UUID : plant_UUIDs ){ + std::vector vertex = context_ptr->getPrimitiveVertices(UUID); + for( vec3 &v : vertex ){ + file << v.x << " " << v.y << " " << v.z << std::endl; + } + } + + file.close(); + +} + void PlantArchitecture::setPlantAge(uint plantID, float a_current_age) { //\todo // this->current_age = current_age; diff --git a/plugins/radiation/doc/Radiation.dox b/plugins/radiation/doc/Radiation.dox index bb4153177..bae827a71 100755 --- a/plugins/radiation/doc/Radiation.dox +++ b/plugins/radiation/doc/Radiation.dox @@ -273,7 +273,7 @@ If you are using a PC, it is likely you will need to increase the GPU timeout in context.setPrimitiveData( UUID, "transmissivity_spectrum", "grape_leaf_transmissivity_0000" ); // Declare the radiation model - %RadiationModel radiationmodel(&context); + RadiationModel radiationmodel(&context); // Add a band with explicit wavelength bounds (400-700nm) radiationmodel.addRadiationBand( "PAR", 400, 700 ); diff --git a/plugins/visualizer/doc/Visualizer.dox b/plugins/visualizer/doc/Visualizer.dox index 24773113b..6fe359dd6 100755 --- a/plugins/visualizer/doc/Visualizer.dox +++ b/plugins/visualizer/doc/Visualizer.dox @@ -65,13 +65,13 @@ The class associated with the visualization is called Visualizer. The class constructor takes one or two arguments that specifies the size of the graphics window. If only one argument is provided (see \ref Visualizer( uint Wdisplay )), the argument is an integer that specifies the width of the diplay window in pixels, with the hight of the window specified according to the default aspect ratio. If two arguments are provided (see \ref Visualizer( uint Wdisplay, uint Hdisplay )), the two arguments correspond respectively to the width and height of the display window in pixels. Below is an example program: -
    - 
     #include "Visualizer.h"
+  ~~~~~~{.cpp}
+  #include "Visualizer.h"
 	
-  int main( void ){
-      %Visualizer vis( 1200 ); //Opens a graphics window of width 1200 pixels with default aspect ratio
-  }
    -
    + int main(){ + Visualizer vis( 1200 ); //Opens a graphics window of width 1200 pixels with default aspect ratio + } + ~~~~~~ \section UseVis Using the Visualizer Plug-in @@ -99,16 +99,16 @@ Below is an example of opening a window (blank), exporting its contents to file, then closing the window: -
    - 
     #include "Visualizer.h"
+  ~~~~~~{.cpp}
+   #include "Visualizer.h"
 	
-   int main( void ){
-      %Visualizer vis( 1200 );
+   int main(){
+      Visualizer vis( 1200 );
       vis.plotUpdate(); //we have not added geometry, so window is blank
       vis.printWindow("blank_window.jpg");
       vis.closeWindow();
-    }
    -
    + } + ~~~~~~