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Multiple AA changes from different transcripts #1080

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shashwatsahay opened this issue Jan 8, 2025 · 0 comments
Open

Multiple AA changes from different transcripts #1080

shashwatsahay opened this issue Jan 8, 2025 · 0 comments

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@shashwatsahay
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How to keep aaChange and choose the transcript to plot

For example when using annovar to annotate vcf we get AA change from multiple transcripts

'BUB1:ENST00000535254.1:exon5:c.C407T:p.A136V,BUB1:ENST00000302759.6:exon6:c.C467T:p.A156V,BUB1:ENST00000409311.1:exon6:c.C467T:p.A156V'

but upon converting it to annovar only the first is kept is there a way to keep all transcript and choose at the time of lollipop which one to plot this is specially true for MYD88 L256P which is a known driver AAchange but isnt displayed to the removal of it from the maf file?

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