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This repository has been archived by the owner on Feb 17, 2020. It is now read-only.
Add text or link about the filtering, i.e., all variants are in the result file but the user should filter out the ones with PASS.
Link to GATK best-practice v3 http://www.broadinstitute.org/gatk/guide/topic?name=best-practices where the filtering strategies are presented.
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