You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Thank you for developing this great tool!
I am using python 3.9.18 and trying to download reference genomes for a few species from PanPhlAn pangenome database following the Tutorial-3_0 (https://github.com/SegataLab/panphlan/wiki/Tutorial-3_0).
These are 8 bacteria I need and I was trying to download them with the following script. However, the process kept terminated during the "Extracting archive" step, as per the screenshot attached below
Hi,
Thank you for developing this great tool!
I am using python 3.9.18 and trying to download reference genomes for a few species from PanPhlAn pangenome database following the Tutorial-3_0 (https://github.com/SegataLab/panphlan/wiki/Tutorial-3_0).
These are 8 bacteria I need and I was trying to download them with the following script. However, the process kept terminated during the "Extracting archive" step, as per the screenshot attached below
panphlan_download_pangenome.py -i Lactobacillus_plantarum
panphlan_download_pangenome.py -i Bifidobacterium_longum
panphlan_download_pangenome.py -i Bifidobacterium_animalis
panphlan_download_pangenome.py -i Bifidobacterium_breve
panphlan_download_pangenome.py -i Lactobacillus_rhamnosus
panphlan_download_pangenome.py -i Lactobacillus_paracasei
panphlan_download_pangenome.py -i Lactobacillus_reuteri
panphlan_download_pangenome.py -i Streptococcus_thermophilus
Would you please advise what would be the possible cause of this problem and how can I go about it?
Thank you in advance!
Regards,
SC
The text was updated successfully, but these errors were encountered: