DeadCellsModule.conf.in

# Paolo Franchini 2020 - p.franchini@imperial.ac.uk

# - Configuration Metadata
#@description Chain pipeline using a single custom module
#@key_label   "name"
#@meta_label  "type"

# - Custom modules
# The "flreconstruct.plugins" section to tell flreconstruct what
# to load and from where.
[name="flreconstruct.plugins" type="flreconstruct::section"]
plugins : string[1] = "DeadCellsModule"
# Adjust this path if you put the lib elsewhere
DeadCellsModule.directory : string = "@PROJECT_BINARY_DIR@"

# - Pipeline configuration
# Must define "pipeline" as this is the module flreconstruct will use
# Make it use our custom module by setting the'type' key to the string we
# used as the second argument to the macro
# At present, it takes no configuration, so it suffices to define it
[name="pipeline" type="dpp::chain_module"]
modules : string[1] = "DeadCells"

# - Module configuration:
[name="DeadCells" type="DeadCellsModule"]
filename_out : string[1] = "test-output.brio"
random : boolean[1] = true			# 'false' if reading a file with a list of dead cells
N_dead_cells : integer[1] = 100			# number of dead cells to be randomly generated
dead_cells : string[1] = "list_shorts.txt"	# file with a list of dead cells (side, layer, column)