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share folder.md

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Share folder

Here is a checklist for the share folder results.

${BASEDIR}/data/share
├── amico
│   ├── noddi_roi                      
│   └── a figure and html file for each scan
├── ciftify                        
│   └── qc_recon_all
├── enigmaDTI                   
│   ├── ADskel_qc_index.html
│   ├── FAskel_qc_index.html
│   ├── group_engimaDTI_nvoxels.csv
│   ├── group_enigmaDTI_AD.csv
│   ├── group_enigmaDTI_FA.csv
│   ├── group_enigmaDTI_MD.csv
│   ├── group_enigmaDTI_RD.csv
│   ├── MDskel_qc_index.html
│   ├── RDskel_qc_index.html
│   └── each subject files
├── ENIGMA_extract
│   ├── CorticalMeasuresENIGMA_SurfAvg.csv
│   ├── CorticalMeasuresENIGMA_ThickAvg.csv
│   └── LandRvolumes.csv
├── fmriprep/23.2.3
│   └── qc images and meta data for each scan
├── smriprep/23.2.3
│   └── qc images and meta data for each scan
├── freesurfer_group
│   └── freesurfer group analysis tsv files, including thickness, euler and aseg
├── mriqc/24.0.0
│   ├── dataset_description.json
│   ├── group_bold.tsv
│   ├── group_T1w.tsv
│   └── group_T2w.tsv
├── qsiprep/0.22.0
│   ├── qsiprep_metrics.csv
│   └── qc images and meta data for each scan
├── tractify
│   └── connectivity.mat file           
├── xcp-d/0.7.3
│   └── qc images and meta data for each scan
└── xcp-noGSR/0.7.3
    └── qc images and meta data for each scan