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G_Plot_Plasticity.py
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from E_Synapses_Plasticity import *
# print('IO-IO')
# visualise(IO_synapse_Coupled_STDP)
# print('DCN-PC')
# visualise(DCN_PC_Synapse_Coupled_STDP)
# print('IO-DCN')
# visualise(IO_DCN_Synapse_Coupled_STDP)
# print('NOISE-DUMMY')
# visualise(copy_noise_Coupled)
# print('DUMMY-PC')
# visualise(S_N_PC_Coupled)
# print('IO-DUMMY')
# visualise(S_IO_N_Coupled)
# print('IO-PC')
# visualise(Synapse_IO_PC_Coupled_STDP)
freq = ['frequency ='+str(input_params[n_Noise*2]), 'frequency ='+str(input_params[n_Noise*2+1])]
print(freq)
if plotting == 'yes':
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Noise Sources', fontsize=16)
for ji in range(len(Noise_I)):
plot(Noise_extended_statemon.t/ms,Noise_extended_statemon.I[ji]/nA, color='C'+str(ji), label=('Noise_I_'+str(ji)))
xlabel('t (ms)')
ylabel('I (nA)')
legend();
show()
print('Plasticity')
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('I_Noise_PC', fontsize=16)
for pp in range(0,N_Cells_PC):
plot(PC_Statemon_Coupled_STDP.t/ms,PC_Statemon_Coupled_STDP.I_Noise[pp]/nA, ('C'+str(pp)), label=('I_Noise_PC'+str(1+pp)))
xlabel('t (ms)')
ylabel('I (nA)')
legend();
show()
print('Plasticity Coupled Scenario')
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Voltage IO Coupled Plasticity', fontsize=16)
for ii in range(0,N_Cells_IO):
plot(IO_Statemon_Coupled_STDP.t/msecond, IO_Statemon_Coupled_STDP.Vs[ii]/mvolt, ('C'+str(ii)), lw='1')
xlabel('Time (ms)')
ylabel('V (mV)')
show()
for pp in range(0,N_Cells_PC,1):
DCN_spikes_Coupled_STDP = DCN_Statemon_Coupled_STDP.v[:]
Times_DCN_Coupled_STDP = DCN_Spikemon_Coupled_STDP.values('t')[pp]/(dt)
print("Number of spikes DCN: %s"% np.size(Times_DCN_Coupled_STDP))
# for pp in range(0,N_Cells_PC,1):
# DCN_spikes_Coupled_STDP = DCN_Statemon_Coupled_STDP.v[:]
# Times_DCN_Coupled_STDP = DCN_Spikemon_Coupled_STDP.values('t')[pp]/(0.025*ms)
# print("Number of spikes DCN: %s"% np.size(Times_DCN_Coupled_STDP))
# for t in range(0,np.size(Times_DCN_Coupled_STDP),1):
# i = int(Times_DCN_Coupled_STDP[t])
# DCN_spikes_Coupled_STDP[pp][i] = 60*mV
# PC_spikes_Coupled_STDP = PC_Statemon_Coupled_STDP.v[:]
# Times_PC_Coupled_STDP = PC_Spikemon_Coupled_STDP.values('t')[pp]/(0.025*ms)
# print("Number of spikes PC: %s"% np.size(Times_PC_Coupled_STDP))
# for t in range(0,np.size(Times_PC_Coupled_STDP),1):
# i = int(Times_PC_Coupled_STDP[t])
# PC_spikes_Coupled_STDP[pp][i] = 50*mV
# figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
# title('Voltage Cells '+str(pp+1) + ' Coupled', fontsize=16)
# plot(PC_Statemon_Coupled_STDP.t/ms, PC_spikes_Coupled_STDP[pp]/mV, ('C'+str(2)), label=('PC'+' '+str(pp+1)))
# plot(IO_Statemon_Coupled_STDP.t/msecond, IO_Statemon_Coupled_STDP.Vs[pp]/mvolt, ('C'+str(3)), lw='4', label=('Vs'+' '+str(pp+1)))
# plot(DCN_Statemon_Coupled_STDP.t/ms, DCN_spikes_Coupled_STDP[pp]/mV, ('C'+str(4)), lw='1',label=('DCN'+' '+str(pp+1)))
# legend(loc='best')
# xlabel('Time (ms)')
# ylabel('V (mV)')
# legend();
# show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Voltage Cells DCN Coupled', fontsize=16)
for pp in range(0,N_Cells_DCN,1):
plot(DCN_Statemon_Coupled_STDP.t/ms, DCN_Statemon_Coupled_STDP.v[pp]/mV, ('C'+str(pp)), lw='1',label=('DCN'+' '+str(pp+1)))
legend(loc='best')
xlabel('Time (ms)')
ylabel('V (mV)')
legend();
show()
# for pp in range(0,N_Cells_IO,1):
# figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
# title('Voltage Cells IO '+str(pp+1) + ' Coupled', fontsize=16)
# plot(IO_Statemon_Coupled_STDP.t/msecond, IO_Statemon_Coupled_STDP.Vs[pp]/mvolt, ('C'+str(3)), lw='4', label=('Vs'+' '+str(pp+1)))
# legend(loc='best')
# xlabel('Time (ms)')
# ylabel('V (mV)')
# legend();
# show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Voltage IO Coupled', fontsize=16)
for ii in range(0,N_Cells_IO):
plot(IO_Statemon_Coupled_STDP.t/msecond, IO_Statemon_Coupled_STDP.Vs[ii]/mvolt, ('C'+str(ii)), lw='1')
xlabel('Time (ms)')
ylabel('V (mV)')
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('weight LTP', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.weight_PC[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.weight_PC[pp+10], ('C'+str(pp)), lw='2', color='red')
#plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.weight_PC[pp], ('C'+str(pp)), lw='2')
legend(['frequency input #1','#2'])
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('weight LTD', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.weight_IO[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.weight_IO[pp+10], ('C'+str(pp)), lw='2', color='red')
legend(['frequency input #1','#2'])
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Delta weight', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.delta_weight[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.delta_weight[pp+10], ('C'+str(pp)), lw='2', color='red')
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('New weight', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.new_weight[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Coupled.t/msecond, mon_N_PC_Coupled.new_weight[pp+10], ('C'+str(pp)), lw='2',color='red')
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()
print('Plasticity Uncoupled Scenario')
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Voltage IO Uncoupled Plasticity', fontsize=16)
for ii in range(0,N_Cells_IO):
plot(IO_Statemon_Uncoupled_STDP.t/msecond, IO_Statemon_Uncoupled_STDP.Vs[ii]/mvolt, ('C'+str(ii)), lw='1')
xlabel('Time (ms)')
ylabel('V (mV)')
show()
for pp in range(0,N_Cells_PC,1):
DCN_spikes_Uncoupled_STDP = DCN_Statemon_Uncoupled_STDP.v[:]
Times_DCN_Uncoupled_STDP = DCN_Spikemon_Uncoupled_STDP.values('t')[pp]/(dt)
print("Number of spikes DCN: %s"% np.size(Times_DCN_Uncoupled_STDP))
# for pp in range(0,N_Cells_PC,1):
# DCN_spikes_Uncoupled_STDP = DCN_Statemon_Uncoupled_STDP.v[:]
# Times_DCN_Uncoupled_STDP = DCN_Spikemon_Uncoupled_STDP.values('t')[pp]/(0.025*ms)
# print("Number of spikes DCN: %s"% np.size(Times_DCN_Uncoupled_STDP))
# for t in range(0,np.size(Times_DCN_Uncoupled_STDP),1):
# i = int(Times_DCN_Uncoupled_STDP[t])
# DCN_spikes_Uncoupled_STDP[pp][i] = 60*mV
# PC_spikes_Uncoupled_STDP = PC_Statemon_Uncoupled_STDP.v[:]
# Times_PC_Uncoupled_STDP = PC_Spikemon_Uncoupled_STDP.values('t')[pp]/(0.025*ms)
# print("Number of spikes PC: %s"% np.size(Times_PC_Uncoupled_STDP))
# for t in range(0,np.size(Times_PC_Uncoupled_STDP),1):
# i = int(Times_PC_Uncoupled_STDP[t])
# PC_spikes_Uncoupled_STDP[pp][i] = 50*mV
# figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
# title('Voltage Cells '+str(pp+1) + ' Uncoupled', fontsize=16)
# plot(PC_Statemon_Uncoupled_STDP.t/ms, PC_spikes_Uncoupled_STDP[pp]/mV, ('C'+str(2)), label=('PC'+' '+str(pp+1)))
# plot(IO_Statemon_Uncoupled_STDP.t/msecond, IO_Statemon_Uncoupled_STDP.Vs[pp]/mvolt, ('C'+str(3)), lw='4', label=('Vs'+' '+str(pp+1)))
# plot(DCN_Statemon_Uncoupled_STDP.t/ms, DCN_spikes_Uncoupled_STDP[pp]/mV, ('C'+str(4)), lw='1',label=('DCN'+' '+str(pp+1)))
# legend(loc='best')
# xlabel('Time (ms)')
# ylabel('V (mV)')
# legend();
# show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Voltage Cells DCN Uncoupled', fontsize=16)
for pp in range(0,N_Cells_DCN,1):
plot(DCN_Statemon_Uncoupled_STDP.t/ms, DCN_Statemon_Uncoupled_STDP.v[pp]/mV, ('C'+str(pp)), lw='1',label=('DCN'+' '+str(pp+1)))
legend(loc='best')
xlabel('Time (ms)')
ylabel('V (mV)')
legend();
show()
# for pp in range(0,N_Cells_IO,1):
# figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
# title('Voltage Cells IO'+str(pp+1) + ' Uncoupled', fontsize=16)
# plot(IO_Statemon_Uncoupled_STDP.t/msecond, IO_Statemon_Uncoupled_STDP.Vs[pp]/mvolt, ('C'+str(3)), lw='4', label=('Vs'+' '+str(pp+1)))
# legend(loc='best')
# xlabel('Time (ms)')
# ylabel('V (mV)')
# legend();
# show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('Voltage IO Uncoupled', fontsize=16)
for ii in range(0,N_Cells_IO):
plot(IO_Statemon_Uncoupled_STDP.t/msecond, IO_Statemon_Uncoupled_STDP.Vs[ii]/mvolt, ('C'+str(ii)), lw='1')
xlabel('Time (ms)')
ylabel('V (mV)')
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('weight LTP', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.weight_PC[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.weight_PC[pp+10], ('C'+str(pp)), lw='2',color='red')
legend(freq)
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('weight LTD', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.weight_IO[pp], ('C'+str(pp)), lw='2',color='red')
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.weight_IO[pp+10], ('C'+str(pp)), lw='2',color='black')
legend(freq)
xlabel('Time (ms)')
ylabel('V (mV)')
# legend();
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('delta_weight', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.delta_weight[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.delta_weight[pp+10], ('C'+str(pp)), lw='2',color='red')
legend(freq)
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()
figure(figsize=(15, 4), dpi= 80, facecolor='w', edgecolor='k')
title('new_weight', fontsize=16)
for pp in range(0,n_PC,1):
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.new_weight[pp], ('C'+str(pp)), lw='2',color='black')
plot(mon_N_PC_Uncoupled.t/msecond, mon_N_PC_Uncoupled.new_weight[pp+10], ('C'+str(pp)), lw='2',color='red')
xlabel('Time (ms)')
ylabel('V (mV)')
legend(freq);
show()