.travis.yml

# Neuroconductor Template no ANTs
language: r
sudo: false
cache: packages
warnings_are_errors: true
use_bioc: true
bioc_required: true
cran: http://cran.rstudio.com

addons:
  apt:
    packages:
    - libfftw3-dev
    - libgsl0-dev
    - libgsl0ldbl

os:
  - linux
  - osx
osx_image: xcode9 
dist: trusty

env:
  global: 
    - RGL_USE_NULL=TRUE
    - PROJECT_NAME=neuroconductor
    - DISPLAY=:99.0
r_check_args: --as-cran
# r_check_args: "--as-cran --install-args=--build"

before_install:
  - export PROJ_DIR=`basename $PWD`    
  - fname=travis_helpers.sh
  - wget -O ${fname} http://bit.ly/travis_helpers
  - cat ${fname}; source ${fname}; rm ${fname}  
  - cat DESCRIPTION
  - start_xvfb ;
  - no_open_mp ; 
  - Rscript -e 'source("https://install-github.me/mangothecat/callr")'
  - remove_neuroc_packages 
  - cat DESCRIPTION
  - install_remotes_no_dep
  - cat DESCRIPTION
  - export PACKAGE_NAME=`package_name`
  - if [[ "${PACKAGE_NAME}" == "waveslim" ]]; 
    then
      fftw_install ;
    fi
  - if [[ "${PACKAGE_NAME}" == "dti" ]]; 
    then
      gsl_install ;
    fi

after_success:
  # travis_wait 100 Rscript -e 'covr::coveralls(type = "all")' ;
  - if [[ "${TRAVIS_OS_NAME}" == "linux" ]]; 
    then
      Rscript -e 'covr::coveralls(type = "all")' ;
    fi  
  - cat ${PACKAGE_NAME}.Rcheck/00install.out
  - cat ${PACKAGE_NAME}.Rcheck/00check.log

after_failure:
  - cat ${PACKAGE_NAME}.Rcheck/00install.out
  - cat ${PACKAGE_NAME}.Rcheck/00check.log

# need this explicitly
# for naming convention
before_deploy:
  - travis_wait 100 R CMD INSTALL --build ${PKG_TARBALL}
  # so no overwrite of linux build
  - if [[ "${TRAVIS_OS_NAME}" = "osx" ]];
    then
      rm -f *.tar.gz;
    fi



# r:
#   - release
#   - devel

# matrix:
#   allow_failures:
#   - r: devel