diff --git a/notebooks/copasi_process_composer.ipynb b/notebooks/copasi_process_composer.ipynb index 004e449b5..e29c7784b 100644 --- a/notebooks/copasi_process_composer.ipynb +++ b/notebooks/copasi_process_composer.ipynb @@ -662,8 +662,8 @@ "metadata": { "collapsed": false, "ExecuteTime": { - "end_time": "2024-02-29T00:59:43.505897Z", - "start_time": "2024-02-29T00:59:42.826064Z" + "end_time": "2024-02-29T01:01:31.133824Z", + "start_time": "2024-02-29T01:01:30.435215Z" } }, "id": "1ecc10e496abe9cb", @@ -678,8 +678,8 @@ "metadata": { "collapsed": false, "ExecuteTime": { - "end_time": "2024-02-29T00:59:44.420975Z", - "start_time": "2024-02-29T00:59:44.390878Z" + "end_time": "2024-02-29T01:01:31.691792Z", + "start_time": "2024-02-29T01:01:31.687554Z" } }, "id": "35ea2649d0f98801", @@ -689,26 +689,329 @@ "cell_type": "code", "outputs": [ { - "data": { - "text/plain": "{'copasi_0': {'copasi_0': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.0}},\n 'parameter_changes': {'catp': {'initial_value': 1.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'copasi_1': {'copasi_1': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.0}},\n 'parameter_changes': {'catp': {'initial_value': 2.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_2': {'copasi_2': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 9.0}},\n 'parameter_changes': {'catp': {'initial_value': 1.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_3': {'copasi_3': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 27.0}},\n 'parameter_changes': {'catp': {'initial_value': 0.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_4': {'copasi_4': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 81.0}},\n 'parameter_changes': {'catp': {'initial_value': 1.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_5': {'copasi_5': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 243.0}},\n 'parameter_changes': {'catp': {'initial_value': -32.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_6': {'copasi_6': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 729.0}},\n 'parameter_changes': {'catp': {'initial_value': 729.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_7': {'copasi_7': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2187.0}},\n 'parameter_changes': {'catp': {'initial_value': -16384.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_8': {'copasi_8': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6561.0}},\n 'parameter_changes': {'catp': {'initial_value': 390625.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_9': {'copasi_9': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 19683.0}},\n 'parameter_changes': {'catp': {'initial_value': -10077696.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_10': {'copasi_10': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 59049.0}},\n 'parameter_changes': {'catp': {'initial_value': 282475249.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_11': {'copasi_11': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 177147.0}},\n 'parameter_changes': {'catp': {'initial_value': -8589934592.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_12': {'copasi_12': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 531441.0}},\n 'parameter_changes': {'catp': {'initial_value': 282429536481.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_13': {'copasi_13': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1594323.0}},\n 'parameter_changes': {'catp': {'initial_value': -10000000000000.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_14': {'copasi_14': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4782969.0}},\n 'parameter_changes': {'catp': {'initial_value': 379749833583241.0}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_15': {'copasi_15': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 14348907.0}},\n 'parameter_changes': {'catp': {'initial_value': -1.5407021574586368e+16}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_16': {'copasi_16': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 43046721.0}},\n 'parameter_changes': {'catp': {'initial_value': 6.654166091831799e+17}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_17': {'copasi_17': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 129140163.0}},\n 'parameter_changes': {'catp': {'initial_value': -3.0491346729331196e+19}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_18': {'copasi_18': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 387420489.0}},\n 'parameter_changes': {'catp': {'initial_value': 1.4778918800354003e+21}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_19': {'copasi_19': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1162261467.0}},\n 'parameter_changes': {'catp': {'initial_value': -7.555786372591432e+22}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_20': {'copasi_20': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3486784401.0}},\n 'parameter_changes': {'catp': {'initial_value': 4.0642314066475725e+24}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_21': {'copasi_21': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 10460353203.0}},\n 'parameter_changes': {'catp': {'initial_value': -2.2946825189512942e+26}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_22': {'copasi_22': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 31381059609.0}},\n 'parameter_changes': {'catp': {'initial_value': 1.356998041817409e+28}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_23': {'copasi_23': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 94143178827.0}},\n 'parameter_changes': {'catp': {'initial_value': -8.388608e+29}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_24': {'copasi_24': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 282429536481.0}},\n 'parameter_changes': {'catp': {'initial_value': 5.410819837727259e+31}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': 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{'initial_value': 1.7979538686803107e+146}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_79': {'copasi_79': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.926960980478197e+37}},\n 'parameter_changes': {'catp': {'initial_value': -3.8394922047207187e+148}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': 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'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_81': {'copasi_81': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.434264882430378e+38}},\n 'parameter_changes': {'catp': {'initial_value': -1.8182886086129776e+153}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 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'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.197251518256202e+40}},\n 'parameter_changes': {'catp': {'initial_value': 2.0546676624565614e+160}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_85': {'copasi_85': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.591754554768606e+40}},\n 'parameter_changes': {'catp': {'initial_value': -4.722559655150671e+162}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_86': {'copasi_86': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.0775263664305817e+41}},\n 'parameter_changes': {'catp': {'initial_value': 1.098287256145076e+165}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_87': {'copasi_87': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.2325790992917455e+41}},\n 'parameter_changes': {'catp': {'initial_value': -2.5840319990130316e+167}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_88': {'copasi_88': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 9.697737297875236e+41}},\n 'parameter_changes': {'catp': {'initial_value': 6.149863307533675e+169}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_89': {'copasi_89': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.909321189362571e+42}},\n 'parameter_changes': {'catp': {'initial_value': -1.4803423396265347e+172}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_90': {'copasi_90': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 8.727963568087712e+42}},\n 'parameter_changes': {'catp': {'initial_value': 3.603568116041181e+174}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_91': {'copasi_91': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.6183890704263137e+43}},\n 'parameter_changes': {'catp': {'initial_value': -8.869990724142571e+176}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_92': {'copasi_92': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.855167211278941e+43}},\n 'parameter_changes': {'catp': {'initial_value': 2.2073978302726454e+179}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_93': {'copasi_93': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.3565501633836824e+44}},\n 'parameter_changes': {'catp': {'initial_value': -5.55332867254366e+181}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_94': {'copasi_94': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.069650490151047e+44}},\n 'parameter_changes': {'catp': {'initial_value': 1.4121826718183249e+184}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_95': {'copasi_95': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.1208951470453142e+45}},\n 'parameter_changes': {'catp': {'initial_value': -3.629473232621766e+186}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_96': {'copasi_96': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6.362685441135942e+45}},\n 'parameter_changes': {'catp': {'initial_value': 9.426773259036049e+188}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_97': {'copasi_97': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.9088056323407826e+46}},\n 'parameter_changes': {'catp': {'initial_value': -2.4740119849691286e+191}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_98': {'copasi_98': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5.726416897022348e+46}},\n 'parameter_changes': {'catp': {'initial_value': 6.560143180425513e+193}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}},\n 'copasi_99': {'copasi_99': {'_type': 'process',\n 'address': 'local:copasi',\n 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.7179250691067045e+47}},\n 'parameter_changes': {'catp': {'initial_value': -1.7573249332135053e+196}},\n 'reaction_changes': None}},\n 'biomodel_id': 'BIOMD0000000051'},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'model_parameters': ['model_parameters_store'],\n 'time': ['time_store'],\n 'reactions': ['reactions_store']},\n 'outputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}},\n 'emitter': {'_type': 'step',\n 'address': 'local:ram-emitter',\n 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}},\n 'inputs': {'floating_species': ['floating_species_store'],\n 'time': ['time_store']}}}}" - }, - "execution_count": 3, - "metadata": {}, - "output_type": "execute_result" + "name": "stdout", + "output_type": "stream", + "text": [ + "NAME: copasi_0\n", + "CONFIG: {'copasi_0': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.0}}, 'parameter_changes': {'catp': {'initial_value': 1.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_1\n", + "CONFIG: {'copasi_1': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.0}}, 'parameter_changes': {'catp': {'initial_value': 2.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_2\n", + "CONFIG: {'copasi_2': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 9.0}}, 'parameter_changes': {'catp': {'initial_value': 1.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_3\n", + "CONFIG: {'copasi_3': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 27.0}}, 'parameter_changes': {'catp': {'initial_value': 0.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_4\n", + "CONFIG: {'copasi_4': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 81.0}}, 'parameter_changes': {'catp': {'initial_value': 1.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_5\n", + "CONFIG: {'copasi_5': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 243.0}}, 'parameter_changes': {'catp': {'initial_value': -32.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_6\n", + "CONFIG: {'copasi_6': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 729.0}}, 'parameter_changes': {'catp': {'initial_value': 729.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_7\n", + "CONFIG: {'copasi_7': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2187.0}}, 'parameter_changes': {'catp': {'initial_value': -16384.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_8\n", + "CONFIG: {'copasi_8': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6561.0}}, 'parameter_changes': {'catp': {'initial_value': 390625.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_9\n", + "CONFIG: {'copasi_9': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 19683.0}}, 'parameter_changes': {'catp': {'initial_value': -10077696.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_10\n", + "CONFIG: {'copasi_10': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 59049.0}}, 'parameter_changes': {'catp': {'initial_value': 282475249.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_11\n", + "CONFIG: {'copasi_11': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 177147.0}}, 'parameter_changes': {'catp': {'initial_value': -8589934592.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_12\n", + "CONFIG: {'copasi_12': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 531441.0}}, 'parameter_changes': {'catp': {'initial_value': 282429536481.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_13\n", + "CONFIG: {'copasi_13': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1594323.0}}, 'parameter_changes': {'catp': {'initial_value': -10000000000000.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_14\n", + "CONFIG: {'copasi_14': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4782969.0}}, 'parameter_changes': {'catp': {'initial_value': 379749833583241.0}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_15\n", + "CONFIG: {'copasi_15': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 14348907.0}}, 'parameter_changes': {'catp': {'initial_value': -1.5407021574586368e+16}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_16\n", + "CONFIG: {'copasi_16': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 43046721.0}}, 'parameter_changes': {'catp': {'initial_value': 6.654166091831799e+17}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_17\n", + "CONFIG: {'copasi_17': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 129140163.0}}, 'parameter_changes': {'catp': {'initial_value': -3.0491346729331196e+19}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_18\n", + "CONFIG: {'copasi_18': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 387420489.0}}, 'parameter_changes': {'catp': {'initial_value': 1.4778918800354003e+21}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_19\n", + "CONFIG: {'copasi_19': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1162261467.0}}, 'parameter_changes': {'catp': {'initial_value': -7.555786372591432e+22}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_20\n", + "CONFIG: {'copasi_20': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3486784401.0}}, 'parameter_changes': {'catp': {'initial_value': 4.0642314066475725e+24}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_21\n", + "CONFIG: {'copasi_21': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 10460353203.0}}, 'parameter_changes': {'catp': {'initial_value': -2.2946825189512942e+26}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_22\n", + "CONFIG: {'copasi_22': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 31381059609.0}}, 'parameter_changes': {'catp': {'initial_value': 1.356998041817409e+28}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_23\n", + "CONFIG: {'copasi_23': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 94143178827.0}}, 'parameter_changes': {'catp': {'initial_value': -8.388608e+29}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_24\n", + "CONFIG: {'copasi_24': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 282429536481.0}}, 'parameter_changes': {'catp': {'initial_value': 5.410819837727259e+31}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_25\n", + "CONFIG: {'copasi_25': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 847288609443.0}}, 'parameter_changes': {'catp': {'initial_value': -3.63552403817421e+33}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_26\n", + "CONFIG: {'copasi_26': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2541865828329.0}}, 'parameter_changes': {'catp': {'initial_value': 2.5405265415414954e+35}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_27\n", + "CONFIG: {'copasi_27': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7625597484987.0}}, 'parameter_changes': {'catp': {'initial_value': -1.8437563379178328e+37}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_28\n", + "CONFIG: {'copasi_28': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 22876792454961.0}}, 'parameter_changes': {'catp': {'initial_value': 1.3877787807814458e+39}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_29\n", + "CONFIG: {'copasi_29': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 68630377364883.0}}, 'parameter_changes': {'catp': {'initial_value': -1.08199957741721e+41}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_30\n", + "CONFIG: {'copasi_30': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 205891132094649.0}}, 'parameter_changes': {'catp': {'initial_value': 8.727963568087712e+42}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_31\n", + "CONFIG: {'copasi_31': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 617673396283947.0}}, 'parameter_changes': {'catp': {'initial_value': -7.276105233821381e+44}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_32\n", + "CONFIG: {'copasi_32': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1853020188851841.0}}, 'parameter_changes': {'catp': {'initial_value': 6.262329758944878e+46}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_33\n", + "CONFIG: {'copasi_33': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5559060566555523.0}}, 'parameter_changes': {'catp': {'initial_value': -5.559060566555523e+48}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_34\n", + "CONFIG: {'copasi_34': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.667718169966657e+16}}, 'parameter_changes': {'catp': {'initial_value': 5.085077665283759e+50}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_35\n", + "CONFIG: {'copasi_35': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5.0031545098999704e+16}}, 'parameter_changes': {'catp': {'initial_value': -4.789048565205903e+52}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_36\n", + "CONFIG: {'copasi_36': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.5009463529699914e+17}}, 'parameter_changes': {'catp': {'initial_value': 4.639827510633868e+54}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_37\n", + "CONFIG: {'copasi_37': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.502839058909974e+17}}, 'parameter_changes': {'catp': {'initial_value': -4.620829355366081e+56}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_38\n", + "CONFIG: {'copasi_38': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.350851717672992e+18}}, 'parameter_changes': {'catp': {'initial_value': 4.7270009034809127e+58}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_39\n", + "CONFIG: {'copasi_39': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.052555153018976e+18}}, 'parameter_changes': {'catp': {'initial_value': -4.963608617944918e+60}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_40\n", + "CONFIG: {'copasi_40': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.2157665459056929e+19}}, 'parameter_changes': {'catp': {'initial_value': 5.346492509150121e+62}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_41\n", + "CONFIG: {'copasi_41': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.647299637717079e+19}}, 'parameter_changes': {'catp': {'initial_value': -5.903743239824623e+64}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_42\n", + "CONFIG: {'copasi_42': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.0941898913151237e+20}}, 'parameter_changes': {'catp': {'initial_value': 6.6790315523026014e+66}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_43\n", + "CONFIG: {'copasi_43': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.2825696739453705e+20}}, 'parameter_changes': {'catp': {'initial_value': -7.737125245533627e+68}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_44\n", + "CONFIG: {'copasi_44': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 9.847709021836112e+20}}, 'parameter_changes': {'catp': {'initial_value': 9.172541718083714e+70}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_45\n", + "CONFIG: {'copasi_45': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.9543127065508336e+21}}, 'parameter_changes': {'catp': {'initial_value': -1.1122900900855932e+73}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_46\n", + "CONFIG: {'copasi_46': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 8.862938119652501e+21}}, 'parameter_changes': {'catp': {'initial_value': 1.3789513890924755e+75}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_47\n", + "CONFIG: {'copasi_47': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.65888143589575e+22}}, 'parameter_changes': {'catp': {'initial_value': -1.74693117386187e+77}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_48\n", + "CONFIG: {'copasi_48': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.976644307687251e+22}}, 'parameter_changes': {'catp': {'initial_value': 2.260479960062846e+79}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_49\n", + "CONFIG: {'copasi_49': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.3929932923061753e+23}}, 'parameter_changes': {'catp': {'initial_value': -2.9863021875341116e+81}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_50\n", + "CONFIG: {'copasi_50': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.178979876918526e+23}}, 'parameter_changes': {'catp': {'initial_value': 4.0261773080566945e+83}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_51\n", + "CONFIG: {'copasi_51': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.1536939630755577e+24}}, 'parameter_changes': {'catp': {'initial_value': -5.537364423931249e+85}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_52\n", + "CONFIG: {'copasi_52': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6.461081889226673e+24}}, 'parameter_changes': {'catp': {'initial_value': 7.765978099609044e+87}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_53\n", + "CONFIG: {'copasi_53': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.938324566768002e+25}}, 'parameter_changes': {'catp': {'initial_value': -1.1102230246251566e+90}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_54\n", + "CONFIG: {'copasi_54': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5.814973700304006e+25}}, 'parameter_changes': {'catp': {'initial_value': 1.6172959883211022e+92}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_55\n", + "CONFIG: {'copasi_55': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.7444921100912017e+26}}, 'parameter_changes': {'catp': {'initial_value': -2.3998489083985175e+94}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_56\n", + "CONFIG: {'copasi_56': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5.233476330273606e+26}}, 'parameter_changes': {'catp': {'initial_value': 3.6261744842640864e+96}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_57\n", + "CONFIG: {'copasi_57': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.5700428990820816e+27}}, 'parameter_changes': {'catp': {'initial_value': -5.577560758395552e+98}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_58\n", + "CONFIG: {'copasi_58': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.710128697246245e+27}}, 'parameter_changes': {'catp': {'initial_value': 8.73043715894886e+100}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_59\n", + "CONFIG: {'copasi_59': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.4130386091738735e+28}}, 'parameter_changes': {'catp': {'initial_value': -1.3902522075819006e+103}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_60\n", + "CONFIG: {'copasi_60': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.23911582752162e+28}}, 'parameter_changes': {'catp': {'initial_value': 2.2516005203233799e+105}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_61\n", + "CONFIG: {'copasi_61': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.271734748256486e+29}}, 'parameter_changes': {'catp': {'initial_value': -3.707725785982764e+107}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_62\n", + "CONFIG: {'copasi_62': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.8152042447694586e+29}}, 'parameter_changes': {'catp': {'initial_value': 6.2061850642980544e+109}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_63\n", + "CONFIG: {'copasi_63': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.1445612734308374e+30}}, 'parameter_changes': {'catp': {'initial_value': -1.055671444382888e+112}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_64\n", + "CONFIG: {'copasi_64': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.4336838202925124e+30}}, 'parameter_changes': {'catp': {'initial_value': 1.8243553755672408e+114}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_65\n", + "CONFIG: {'copasi_65': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.0301051460877538e+31}}, 'parameter_changes': {'catp': {'initial_value': -3.202283793178454e+116}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_66\n", + "CONFIG: {'copasi_66': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.090315438263261e+31}}, 'parameter_changes': {'catp': {'initial_value': 5.7078987919450065e+118}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_67\n", + "CONFIG: {'copasi_67': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 9.270946314789783e+31}}, 'parameter_changes': {'catp': {'initial_value': -1.0328999512347634e+121}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_68\n", + "CONFIG: {'copasi_68': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.7812838944369352e+32}}, 'parameter_changes': {'catp': {'initial_value': 1.8971787507474678e+123}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_69\n", + "CONFIG: {'copasi_69': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 8.343851683310805e+32}}, 'parameter_changes': {'catp': {'initial_value': -3.536157110771666e+125}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_70\n", + "CONFIG: {'copasi_70': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.5031555049932416e+33}}, 'parameter_changes': {'catp': {'initial_value': 6.687074921915309e+127}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_71\n", + "CONFIG: {'copasi_71': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.509466514979725e+33}}, 'parameter_changes': {'catp': {'initial_value': -1.282722764219853e+130}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_72\n", + "CONFIG: {'copasi_72': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.252839954493917e+34}}, 'parameter_changes': {'catp': {'initial_value': 2.4953676069084525e+132}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_73\n", + "CONFIG: {'copasi_73': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6.758519863481753e+34}}, 'parameter_changes': {'catp': {'initial_value': -4.922173535218487e+134}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_74\n", + "CONFIG: {'copasi_74': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.0275559590445257e+35}}, 'parameter_changes': {'catp': {'initial_value': 9.842780613983922e+136}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_75\n", + "CONFIG: {'copasi_75': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6.0826678771335774e+35}}, 'parameter_changes': {'catp': {'initial_value': -1.9949739648013772e+139}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_76\n", + "CONFIG: {'copasi_76': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.8248003631400732e+36}}, 'parameter_changes': {'catp': {'initial_value': 4.09767366999553e+141}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_77\n", + "CONFIG: {'copasi_77': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5.474401089420219e+36}}, 'parameter_changes': {'catp': {'initial_value': -8.527906287593991e+143}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_78\n", + "CONFIG: {'copasi_78': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.6423203268260657e+37}}, 'parameter_changes': {'catp': {'initial_value': 1.7979538686803107e+146}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_79\n", + "CONFIG: {'copasi_79': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.926960980478197e+37}}, 'parameter_changes': {'catp': {'initial_value': -3.8394922047207187e+148}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_80\n", + "CONFIG: {'copasi_80': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.4780882941434593e+38}}, 'parameter_changes': {'catp': {'initial_value': 8.303439272767327e+150}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_81\n", + "CONFIG: {'copasi_81': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 4.434264882430378e+38}}, 'parameter_changes': {'catp': {'initial_value': -1.8182886086129776e+153}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_82\n", + "CONFIG: {'copasi_82': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.3302794647291133e+39}}, 'parameter_changes': {'catp': {'initial_value': 4.031080637267739e+155}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_83\n", + "CONFIG: {'copasi_83': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.99083839418734e+39}}, 'parameter_changes': {'catp': {'initial_value': -9.046256971665328e+157}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_84\n", + "CONFIG: {'copasi_84': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.197251518256202e+40}}, 'parameter_changes': {'catp': {'initial_value': 2.0546676624565614e+160}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_85\n", + "CONFIG: {'copasi_85': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.591754554768606e+40}}, 'parameter_changes': {'catp': {'initial_value': -4.722559655150671e+162}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_86\n", + "CONFIG: {'copasi_86': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.0775263664305817e+41}}, 'parameter_changes': {'catp': {'initial_value': 1.098287256145076e+165}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_87\n", + "CONFIG: {'copasi_87': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 3.2325790992917455e+41}}, 'parameter_changes': {'catp': {'initial_value': -2.5840319990130316e+167}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_88\n", + "CONFIG: {'copasi_88': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 9.697737297875236e+41}}, 'parameter_changes': {'catp': {'initial_value': 6.149863307533675e+169}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_89\n", + "CONFIG: {'copasi_89': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.909321189362571e+42}}, 'parameter_changes': {'catp': {'initial_value': -1.4803423396265347e+172}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_90\n", + "CONFIG: {'copasi_90': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 8.727963568087712e+42}}, 'parameter_changes': {'catp': {'initial_value': 3.603568116041181e+174}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_91\n", + "CONFIG: {'copasi_91': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.6183890704263137e+43}}, 'parameter_changes': {'catp': {'initial_value': -8.869990724142571e+176}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_92\n", + "CONFIG: {'copasi_92': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.855167211278941e+43}}, 'parameter_changes': {'catp': {'initial_value': 2.2073978302726454e+179}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_93\n", + "CONFIG: {'copasi_93': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.3565501633836824e+44}}, 'parameter_changes': {'catp': {'initial_value': -5.55332867254366e+181}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_94\n", + "CONFIG: {'copasi_94': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 7.069650490151047e+44}}, 'parameter_changes': {'catp': {'initial_value': 1.4121826718183249e+184}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_95\n", + "CONFIG: {'copasi_95': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 2.1208951470453142e+45}}, 'parameter_changes': {'catp': {'initial_value': -3.629473232621766e+186}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_96\n", + "CONFIG: {'copasi_96': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 6.362685441135942e+45}}, 'parameter_changes': {'catp': {'initial_value': 9.426773259036049e+188}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_97\n", + "CONFIG: {'copasi_97': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.9088056323407826e+46}}, 'parameter_changes': {'catp': {'initial_value': -2.4740119849691286e+191}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_98\n", + "CONFIG: {'copasi_98': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 5.726416897022348e+46}}, 'parameter_changes': {'catp': {'initial_value': 6.560143180425513e+193}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: copasi_99\n", + "CONFIG: {'copasi_99': {'_type': 'process', 'address': 'local:copasi', 'config': {'model': {'model_changes': {'species_changes': {'Extracellular Glucose': {'initial_concentration': 1.7179250691067045e+47}}, 'parameter_changes': {'catp': {'initial_value': -1.7573249332135053e+196}}, 'reaction_changes': None}}, 'biomodel_id': 'BIOMD0000000051'}, 'inputs': {'floating_species': ['floating_species_store'], 'model_parameters': ['model_parameters_store'], 'time': ['time_store'], 'reactions': ['reactions_store']}, 'outputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}}\n", + "\n", + "NAME: emitter\n", + "CONFIG: {'_type': 'step', 'address': 'local:ram-emitter', 'config': {'emit': {'floating_species': 'tree[float]', 'time': 'float'}}, 'inputs': {'floating_species': ['floating_species_store'], 'time': ['time_store']}}\n" + ] } ], "source": [ - "parameter_scan_instance" + "for name, val in parameter_scan_instance.items():\n", + " print(f'NAME: {name}')\n", + " print(f'CONFIG: {val}')\n", + " print()" ], "metadata": { "collapsed": false, "ExecuteTime": { - "end_time": "2024-02-29T00:59:49.492245Z", - "start_time": "2024-02-29T00:59:49.487351Z" + "end_time": "2024-02-29T01:02:34.832479Z", + "start_time": "2024-02-29T01:02:34.824730Z" } }, "id": "ed3c8d517ac54852", - "execution_count": 3 + "execution_count": 5 }, { "cell_type": "code",