From 16c9fdbb8ee05e90d71a6f302eb93042fed49667 Mon Sep 17 00:00:00 2001 From: gatk-sv-bot <101641599+gatk-sv-bot@users.noreply.github.com> Date: Tue, 27 Aug 2024 20:37:04 +0000 Subject: [PATCH] Update docker images list, triggered by 6b27c39f --- inputs/values/dockers.json | 10 +++++----- inputs/values/dockers_azure.json | 10 +++++----- 2 files changed, 10 insertions(+), 10 deletions(-) diff --git a/inputs/values/dockers.json b/inputs/values/dockers.json index c170783b2..d1f5def70 100644 --- a/inputs/values/dockers.json +++ b/inputs/values/dockers.json @@ -1,6 +1,6 @@ { "name": "dockers", - "cnmops_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/cnmops:2024-06-04-v0.28.5-beta-a8dfecba", + "cnmops_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/cnmops:2024-08-27-v0.29-beta-6b27c39f", "condense_counts_docker": "us.gcr.io/broad-dsde-methods/tsharpe/gatk:4.2.6.1-57-g9e03432", "gatk_docker": "us.gcr.io/broad-dsde-methods/eph/gatk:2024-07-02-4.6.0.0-1-g4af2b49e9-NIGHTLY-SNAPSHOT", "gatk_docker_pesr_override": "us.gcr.io/broad-dsde-methods/tsharpe/gatk:4.2.6.1-57-g9e03432", @@ -10,10 +10,10 @@ "melt_docker": "us.gcr.io/talkowski-sv-gnomad/melt:a85c92f", "scramble_docker": "us.gcr.io/broad-dsde-methods/markw/scramble:mw-scramble-99af4c50", "samtools_cloud_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/samtools-cloud:2024-01-24-v0.28.4-beta-9debd6d7", - "sv_base_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-base:2024-01-24-v0.28.4-beta-9debd6d7", + "sv_base_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-base:2024-08-27-v0.29-beta-6b27c39f", "sv_base_mini_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-base-mini:2024-01-24-v0.28.4-beta-9debd6d7", - "sv_pipeline_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2024-08-19-v0.28.5-beta-84a0627d", - "sv_pipeline_qc_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2024-08-19-v0.28.5-beta-84a0627d", + "sv_pipeline_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2024-08-27-v0.29-beta-6b27c39f", + "sv_pipeline_qc_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/sv-pipeline:2024-08-27-v0.29-beta-6b27c39f", "wham_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/wham:2024-01-24-v0.28.4-beta-9debd6d7", "igv_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/igv:mw-xz-fixes-2-b1be6a9", "duphold_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/duphold:mw-xz-fixes-2-b1be6a9", @@ -28,5 +28,5 @@ "sv_utils_docker": "us.gcr.io/broad-dsde-methods/markw/sv-utils:mw-train-genotype-filtering-a9479501", "gq_recalibrator_docker": "us.gcr.io/broad-dsde-methods/markw/gatk:mw-tb-form-sv-filter-training-data-899360a", "str": "us.gcr.io/broad-dsde-methods/gatk-sv/str:2023-05-23-v0.27.3-beta-e537bdd6", - "denovo": "us.gcr.io/broad-dsde-methods/gatk-sv/denovo:2024-08-19-v0.28.5-beta-84a0627d" + "denovo": "us.gcr.io/broad-dsde-methods/gatk-sv/denovo:2024-08-27-v0.29-beta-6b27c39f" } \ No newline at end of file diff --git a/inputs/values/dockers_azure.json b/inputs/values/dockers_azure.json index 12498e0e3..8ede2fae2 100644 --- a/inputs/values/dockers_azure.json +++ b/inputs/values/dockers_azure.json @@ -1,6 +1,6 @@ { "name": "dockers", - "cnmops_docker": "vahid.azurecr.io/gatk-sv/cnmops:2024-06-04-v0.28.5-beta-a8dfecba", + "cnmops_docker": "vahid.azurecr.io/gatk-sv/cnmops:2024-08-27-v0.29-beta-6b27c39f", "condense_counts_docker": "vahid.azurecr.io/tsharpe/gatk:4.2.6.1-57-g9e03432", "gatk_docker": "vahid.azurecr.io/gatk-sv/gatk:2024-07-02-4.6.0.0-1-g4af2b49e9-NIGHTLY-SNAPSHOT", "gatk_docker_pesr_override": "vahid.azurecr.io/tsharpe/gatk:4.2.6.1-57-g9e03432", @@ -10,10 +10,10 @@ "melt_docker": "vahid.azurecr.io/melt:a85c92f", "scramble_docker": "vahid.azurecr.io/scramble:mw-scramble-99af4c50", "samtools_cloud_docker": "vahid.azurecr.io/gatk-sv/samtools-cloud:2024-01-24-v0.28.4-beta-9debd6d7", - "sv_base_docker": "vahid.azurecr.io/gatk-sv/sv-base:2024-01-24-v0.28.4-beta-9debd6d7", + "sv_base_docker": "vahid.azurecr.io/gatk-sv/sv-base:2024-08-27-v0.29-beta-6b27c39f", "sv_base_mini_docker": "vahid.azurecr.io/gatk-sv/sv-base-mini:2024-01-24-v0.28.4-beta-9debd6d7", - "sv_pipeline_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2024-08-19-v0.28.5-beta-84a0627d", - "sv_pipeline_qc_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2024-08-19-v0.28.5-beta-84a0627d", + "sv_pipeline_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2024-08-27-v0.29-beta-6b27c39f", + "sv_pipeline_qc_docker": "vahid.azurecr.io/gatk-sv/sv-pipeline:2024-08-27-v0.29-beta-6b27c39f", "wham_docker": "vahid.azurecr.io/gatk-sv/wham:2024-01-24-v0.28.4-beta-9debd6d7", "igv_docker": "vahid.azurecr.io/gatk-sv/igv:mw-xz-fixes-2-b1be6a9", "duphold_docker": "vahid.azurecr.io/gatk-sv/duphold:mw-xz-fixes-2-b1be6a9", @@ -28,5 +28,5 @@ "sv_utils_docker": "vahid.azurecr.io/gatk-sv/sv-utils:2024-01-24-v0.28.4-beta-9debd6d7", "gq_recalibrator_docker": "vahid.azurecr.io/markw/gatk:mw-tb-form-sv-filter-training-data-899360a", "str": "vahid.azurecr.io/gatk-sv/str:2023-05-23-v0.27.3-beta-e537bdd6", - "denovo": "vahid.azurecr.io/gatk-sv/denovo:2024-08-19-v0.28.5-beta-84a0627d" + "denovo": "vahid.azurecr.io/gatk-sv/denovo:2024-08-27-v0.29-beta-6b27c39f" } \ No newline at end of file