Bugfix release - 1.9.4

Fixes #47

• Main method now detects failure in underlying section methods

Bugfix release - 1.9.3

• Bugfix to bed file reading in ignore segments file.

1.9.2 - Upgrade to htslib 1.3 - no patch needed

Resolves #45 so that a standard build of htslib is sufficient.

1.9.0 - No change to functionallity

Minor corrections to install methods and unused file cleanup

Feature Release - 1.8.0

• Takes readlength into account when calculating split sections

Bugfix release - 1.7.2

• RG lane id search no longer requires ID to be at the beginning of the RG line.

1.7.1 Bugfix release

Added header read to bam_access_get_by_position_counts method. Fixes #41

1.7.0 Feature release

• Added extra checking to result merging code to ensure all files are found. Avoids estep failures where file is not produced.

1.6.4 Bugfix Release

• Fixed bug where error thrown when no CN file, and should be using default. Fixes #37.
• Removed need for stack memory usage in array reading and writing. Fixes #38.
• Added -g flag to compile for easier debugging.

1.6.3 - Bugfix Release

• Added range 61-254 to map quality covariates. Fixes #36