Error rescoring sage and ddaPASEF file

[bsphinney]

Hi All, any idea how to fix this error ? I'm using the sage output tsv and a .d directory file. If you need the files happy to upload them :)

Cheers

Brett

Reading PSMs from PSM file (1/1): 'F:/sage/sage-v0.14.0_tdf_ms1_beta_rc1-x86_64-pc-windows-msvc/sage-v0.14.0_tdf_ms1_beta_rc1-x86_64-pc-windows-msvc/results.sage.tsv'...
Removed 0 PSMs with rank >= 10.
Removed 3 PSMs with invalid amino acids.
Found 191049 PSMs, of which 22.61% are decoys.
Found 101505 identified PSMs with rank <= 1 at 0.01 FDR before rescoring.
Parsing missing retention time and/or ion mobility values from spectra...
ufunc 'isnan' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe''
Traceback (most recent call last):
File "ms2rescore\gui\function2ctk.py", line 301, in run
self.fn(*self.fn_args, **self.fn_kwargs)
File "ms2rescore\gui\app.py", line 809, in function
rescore(configuration=config)
File "ms2rescore\core.py", line 65, in rescore
psm_list = _fill_missing_precursor_info(psm_list, config)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "ms2rescore\core.py", line 198, in _fill_missing_precursor_info
or np.isnan(psm_list[value_name]).any()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
TypeError: ufunc 'isnan' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe''