Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(39 seqs, >10 places, 4 with S:A435S+A475V) #2852

Open
xz-keg opened this issue Dec 25, 2024 · 3 comments
Open

KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(39 seqs, >10 places, 4 with S:A435S+A475V) #2852

xz-keg opened this issue Dec 25, 2024 · 3 comments

Comments

@xz-keg
Copy link
Contributor

xz-keg commented Dec 25, 2024 •
edited
Loading

From branch 26 of sars-cov-2-variants/lineage-proposals#1771

This one is not very fast but very widespread in vast undersampled regions, deserve to be designated.

KP.4.2+C13862T(Orf1b:T132I)+G22132T,C24023T,del21653_21655(S:S31-,R190S)

GISAID query:-A1989G,G22132T, C6070T, C13862T
GISAID query for S:A435S+S:A475V sub-branch: C5203T,G22865T,C22986T
No. of seqs: 20(Canada 7(ON,NS), UK 2(Scotland) Japan 1 Italy 3 Malaysia 1 New Zealand 1 USA 5(NY, GBW from Afghanistan, Saudi Arabia and Pakistan))

First: EPI_ISL_19309614, Scotland, 2024-7-16
Latest: EPI_ISL_19632337, Canada-ON, 2024-12-15

usher
image
@xz-keg xz-keg mentioned this issue Dec 25, 2024
Open
@xz-keg xz-keg changed the title KP.4.2+Orf1b:T132I+S:S31-,R190S(20 seqs, >10 places, 3 with S:A435S+A475V) KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(20 seqs, >10 places, 3 with S:A435S+A475V) Dec 25, 2024
@xz-keg
Copy link
Contributor Author

xz-keg commented Dec 30, 2024 •
edited
Loading

+1 Russia, on the S:A435S+A475V branch.

@xz-keg xz-keg changed the title KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(20 seqs, >10 places, 3 with S:A435S+A475V) KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(21 seqs, >10 places, 4 with S:A435S+A475V) Dec 30, 2024
@xz-keg xz-keg changed the title KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(21 seqs, >10 places, 4 with S:A435S+A475V) KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(29 seqs, >10 places, 4 with S:A435S+A475V) Jan 2, 2025
@FedeGueli
Copy link
Contributor

33 it entered a cluster in Ontario

@xz-keg xz-keg changed the title KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(29 seqs, >10 places, 4 with S:A435S+A475V) KP.4.2+Orf1b:T132I+S:S31-,R190S widespread in Central/South Asia(39 seqs, >10 places, 4 with S:A435S+A475V) Jan 15, 2025
@xz-keg
Copy link
Contributor Author

xz-keg commented Feb 1, 2025

designated KP.4.2.6, tracking the A435S+A475V branch

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@xz-keg @FedeGueli