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LP.8.1.1 + S:A475V (15 seqs, 4 countries) #2872

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cvejris opened this issue Jan 17, 2025 · 2 comments
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LP.8.1.1 + S:A475V (15 seqs, 4 countries) #2872

cvejris opened this issue Jan 17, 2025 · 2 comments

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@cvejris
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cvejris commented Jan 17, 2025 •
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Proposing S:A475V (C22986T) on LP.8.1.1 (S:K679R) polytomy, from sars-cov-2-variants/lineage-proposals#2199
Query: C22120A, G22132T, C22986T, A23598G, -A10323G,-C3261T, -C21627A, -C8802T, -A2793T (both A475V and K679R are convergent, so the query is double crazy)
First collected: 01-11-2024
Samples per country: 10x USA, 3x Canada, 1x Japan, 1x Denmark
Tree:
https://nextstrain.org/fetch/genome.ucsc.edu/trash/hgPhyloPlace/singleSubtreeAuspice_genome_220e0a_a24f50.json?c=gt-S_475&gmax=25384&gmin=21563&label=id:node_7419069

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@FedeGueli FedeGueli mentioned this issue Jan 17, 2025
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@corneliusroemer
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NY.6

@FedeGueli
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NY.6

from 1f6d884

FedeGueli referenced this issue Jan 29, 2025
@corneliusroemer
Designate NY.1-6 (LP.8.1.1*)
1f6d884
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@corneliusroemer @FedeGueli @cvejris