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Copy pathSorghum_Leaf_Constraints.txt
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Sorghum_Leaf_Constraints.txt
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reaction upper-bound lower-bound comment
Sucrose_tx1 0 0 turn off free sugar uptake
Sucrose_tx2 0 0 turn off free sugar uptake
Sucrose_tx3 0 0 turn off free sugar uptake
Sucrose_tx4 0 0 turn off free sugar uptake
GLC_tx1 0 0 turn off free sugar uptake
GLC_tx2 0 0 turn off free sugar uptake
GLC_tx3 0 0 turn off free sugar uptake
GLC_tx4 0 0 turn off free sugar uptake
Photon_tx2 0 0 turn off photon uptake at night
Photon_tx4 0 0 turn off photon uptake at night
CO2_tx3 0 0 turn off CO2 uptake in bundle-sheath cells
CO2_tx4 0 0 turn off CO2 uptake in bundle-sheath cells
NH4_tx1 0 0 turn off ammonium uptake
NH4_tx2 0 0 turn off ammonium uptake
NH4_tx3 0 0 turn off ammonium uptake
NH4_tx4 0 0 turn off ammonium uptake
RIBULOSE_BISPHOSPHATE_CARBOXYLASE_RXN_p1 0 0 turn off RUBISCO in mesophyll cells
RIBULOSE_BISPHOSPHATE_CARBOXYLASE_RXN_p2 0 0 turn off RUBISCO in mesophyll cells
GLYOHMETRANS_RXN_m1 0 0 Based on doi.org/10.1093/jxb/erw056
GLYOHMETRANS_RXN_m2 0 0 Based on doi.org/10.1093/jxb/erw056
GCVMULTI_RXN_m1 0 0 Based on doi.org/10.1093/jxb/erw056
GCVMULTI_RXN_m2 0 0 Based on doi.org/10.1093/jxb/erw056
2PGADEHYDRAT_RXN_p1 0 0 Based on doi.org/10.1016/j.febslet.2009.02.017
2PGADEHYDRAT_RXN_p2 0 0 Based on doi.org/10.1016/j.febslet.2009.02.017
2PGADEHYDRAT_RXN_p3 0 0 Based on doi.org/10.1016/j.febslet.2009.02.017
2PGADEHYDRAT_RXN_p4 0 0 Based on doi.org/10.1016/j.febslet.2009.02.017
Plastoquinol_Oxidase_p1 0 0 Based on doi.org/10.1104/pp.123.4.1427 - doubleCheck
Plastoquinol_Oxidase_p2 0 0 Based on doi.org/10.1104/pp.123.4.1427 - doubleCheck
Plastoquinol_Oxidase_p3 0 0 Based on doi.org/10.1104/pp.123.4.1427 - doubleCheck
Plastoquinol_Oxidase_p4 0 0 Based on doi.org/10.1104/pp.123.4.1427 - doubleCheck
GLYCOGENSYN_RXN_p1 0 0 Based on doi.org/10.1093/jxb/err035
GLYCOGENSYN_RXN_p2 0 0 Based on doi.org/10.1093/jxb/err035
G6P_Pi_pc1 0 0 Based on doi.org/10.1093/jxb/erh143 and doi.org/10.1093/jxb/err035
G6P_Pi_pc2 0 0 Based on doi.org/10.1093/jxb/erh143 and doi.org/10.1093/jxb/err035
G6P_Pi_pc3 0 0 Based on doi.org/10.1093/jxb/erh143 and doi.org/10.1093/jxb/err035
G6P_Pi_pc4 0 0 Based on doi.org/10.1093/jxb/erh143 and doi.org/10.1093/jxb/err035
PSII_RXN_p3 0 0 Based on doi.org/10.1016/j.jplph.2005.06.007
PSII_RXN_p4 0 0 Based on doi.org/10.1016/j.jplph.2005.06.007
1_PERIOD_1_PERIOD_1_PERIOD_39_RXN_m3 0 0 Based on doi.org/10.1104/pp.120.2.539
1_PERIOD_1_PERIOD_1_PERIOD_39_RXN_m4 0 0 Based on doi.org/10.1104/pp.120.2.539
GAPOXNPHOSPHN_RXN_c1 4000 0
GAPOXNPHOSPHN_RXN_c2 4000 0
GAPOXNPHOSPHN_RXN_c3 4000 0
GAPOXNPHOSPHN_RXN_c4 4000 0
GAPOXNPHOSPHN_RXN_p1 4000 0
GAPOXNPHOSPHN_RXN_p2 4000 0
GAPOXNPHOSPHN_RXN_p3 4000 0
GAPOXNPHOSPHN_RXN_p4 4000 0