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@dantaki dantaki released this 27 Oct 19:50
· 52 commits to master since this release
sv2v1.4.0
8c4336c

SV2 v1.4.0

02/28/2018

commit 813e36a

Change Log

  • supports CRAM files
  • supports mm10 genotyping
  • supports scikit-learn >= v0.19
  • option to skip annotation -no-anno
  • deobfuscated code, improved execution time
  • simplified command line arguments
  • removed need for sample information file, now pass the input files directly!
  • uses sample identifier from the bam header
  • uses reference lengths from the bam header
  • standard error now outputs to a log file
  • fixed bugs in filtering
  • fixed errors in gene annotation
  • heterozygous allele ratio supports multiallelic variants
  • removed parallelization capabilities

❗ Please use the sv2-1.4.0.tar.gz link not the "Source Code" links. ❗

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