Skip to content

Latest commit

 

History

History
1939 lines (1645 loc) · 132 KB

CHANGELOG.md

File metadata and controls

1939 lines (1645 loc) · 132 KB

SOFA Changelog

On master branch (not released yet)

Full log

Breaking

  • Ongoing SOFA-NG project generate several breaking changes due to modularization. It currently targets SOFA packages (SofaMisc, SofaGeneral and soon SofaCommon), as well as SofaKernel (SofaBase*, SofaCore, SofaHelper, SofaSimulation). Follow the progress of the project online.

    • [Modularization] SofaMisc* (Revival) #1520

  • Ongoing Uniform type for indices and sizes. Following PR have been performed and update the size_type and index_type in SOFA:

    • [All] Uniform size type #1515
    • [All] Change index_type from size_t to uint #1514
    • [All] Standardize index type for Vector/Matrix templates #1453

  • Ongoing cleaning of the Link implementation

    • [SofaKernel] Refactor BaseData to use DataLink #1491
    • remove traits code from Link.h and BaseLink.h #1503
    • remove reflection code in BaseData #1541

  • [SofaKernel] FIX & CLEANUP BoxROI #1482, breaking because of the removal of aliases & deprecated datafields

  • [SofaMacros] Refactor for better target and package management #1433: the sofa_create_package_with_targets replaces the legacy sofa_add_targets_to_package in CMakeLists.txt of plugins

  • [SofaKernel][SofaCore][SofaLoader][SofaGeneralLoader] SOFA with callbacks #1408: this PR might break component updates / internal update process, it also removed isPersistent flag from datafields in MeshLoaders (based on #1407 and #1406)

  • [SofaGeneralEngine] Refresh MeshBarycentricMapperEngine #1404, breaking because of the change in the fields name (following the naming convention d_* ), but this engine is not used anywhere

  • [plugins] Remove plugins to be deleted #1439

Deprecated

Improvements

Bug Fixes

v20.06

Full log

Breaking

Architecture

  • [All] CMake and includes massive clean #1397
  • [CMake] Remove the use of an internal Eigen3 version and instead use the one installed on the system. #1281
  • [CMake] Remove Collections #1314
  • [Modularization] SofaNonUniformFem + SofaAdvanced removal #1344
  • [Modularization] SofaValidation #1302

Modules

  • [All] BaseClass reflection refactoring #1283
  • [All] Remove Aspects from Sofa #1269
  • [All] Remove compilation warnings related to collision models #1301
  • [All] Update code base according to refactoring done in PR1283. #1330
  • [All] Remove all deprecation warnings after v1912 #1241
  • [All] v19.12 changes + DocBrowser by Defrost #1275
  • [SofaBaseMechanics] Change data name: handleTopologicalChanges in UniformM #1291
  • [SofaCore/Visual] Add new functions in drawTool (BREAKING) #1252
  • [SofaGeneralEngine] Refresh MeshBarycentricMapperEngine #1404
  • [SofaCore] ADD directory DataFileNames #1407
  • [SofaKernel] Refactor DDGNode #1372
  • [SofaKernel] Totally remove the macro CHECK_TOPOLOGY from BaseMeshTopology #1399
  • [SofaKernel] Update EulerExplicitSolver #1260
  • [SofaKernel] implement activer's code at CollisionModel. #1259

Plugins

  • [SofaCUDA] Arch auto-detection for nvcc #1336

Improvements

Architecture

  • [CMake] Create an IDE folder for all relocatable_install targets #1405

Modules

  • [SofaBaseVisual] Add camera gizmo in base camera #1253
  • [SofaCore] Remove warning in ExecParam #1325
  • [SofaCore] ADD: DataCallback system in Base #1406
  • [SofaDefaultType] Add a Ray type. #1251
  • [SofaHelper] Add the obj id to labels when available #1256
  • [SofaHelper] Add auto-friendly getWriteAccessors/getReadAcessor... #1254
  • [SofaKernel] Set the default compilation mode to c++17. #1249
  • [SofaKernel] Add DataTypeInfo for BoundingBox #1373
  • [SofaKernel] Cleaner output when the creation of an object fails #1266
  • [SofaSimulationCore] Add a way to fill a multi vector from a base vector with a MechanicalOperations (mops). #1248

Plugins / Projects

  • [plugins] Fix warnings for option compilation #1316
  • [sofa-launcher] Change doc on sofa-launcher to markdown #1311
  • [SofaCUDA] Compilation without OpenGL #1242

Examples / Scenes

  • [examples] Add a scene illustrating ShewchukPCG #1420

Bug Fixes

Architecture

  • [CMake] Add SofaNonUniformFem to the dependencies of SofaMisc #1384
  • [SofaFramework/CMake] Create configuration type dir before copying lib #1347
  • [extlibs/gtest] Add character test in gtest paramName to allow dash character #1265

Modules

  • [All] Clean warnings for option config, again #1339
  • [All] Fix SOFA_LIBSUFFIX used in Debug by PluginManager #1313
  • [All] Overridden 'canCreate' methods should always log an error message when they fail #1294
  • [SofaBaseTopology] Fix GridTopology edge computation #1323
  • [SofaBaseTopology][SofaExporter] Fix failing tests due to changes in topology #1335
  • [SofaConstraint] Fix test further to #1369 #1386
  • [SofaEigen2Solver] Fix CMake test on the version of Eigen #1416
  • [SofaEngine] Fix engine unit tests #1280
  • [SofaEngine] Fix Engine_test #1338
  • [SofaFramework] Windows/VS: Remove warnings flags from definitions #1368
  • [SofaGuiQt] Fix compilation for SOFA_DUMP_VISITOR_INFO #1415
  • [SofaGuiQt] Fix node graph #1424
  • [SofaHeadlessRecorder] Update headless recorder to use the new ffmpeg recorder #1396
  • [SofaHelper] AdvancedTimer wasn't using the good timer ids for the label assignments #1244
  • [SofaHelper] Fix unloading with PluginManager #1274
  • [SofaHelper] Fix fixed_array compilation with VS2019 #1426
  • [SofaKernel] Fix hexahedra detection in BoxROI #1417
  • [SofaKernel] Fix minor bug in BoxROI and add warning message in RestShapeSpringsForceField #1391
  • [SofaKernel] Fixes a bug where the camera was not moving with the Qt viewer #1377
  • [SofaKernel] Improve error message when a component cannot be created. #1332
  • [SofaKernel] Remove the installation of external system libraries #1387
  • [SofaKernel] Set default visibility to SOFA_EXPORT_DYNAMIC_LIBRARY #1410
  • [SofaMiscTopology] Fix bug in TopologicalChangeProcessor #1247
  • [SofaSimpleFEM] Small Fix #1403
  • [SofaSimulationCore] FIX resizing of bboxes in UpdateBoundingBoxVisitor #1268
  • [SofaTopologyMapping] Fix Tetra2TriangleTopologicalMapping #1319

Plugins / Projects

  • [Geomagic] Fix several wrong behaviors in driver code #1378
  • [MeshSTEPLoader] FIX OCC version check #1312
  • [MeshSTEPLoader] FIX build with OCC >= 7.4 #1310
  • [Modeler] FIX link error on Windows #1282
  • [SofaMiscCollision] Fix topological changes in TetrahedronCollisionModel #1354
  • [SofaSphFluid] Fix broken behavior for ParticleSink and ParticleSource #1278
  • [SofaSphFluid] FIX .scene-tests #1317
  • [SofaOpenCL] Make it work with 20.06 #1361
  • [SofaPython] Restrict the plugin and its dependers to C++11 #1284

Examples / Scenes

  • [examples] Fix SurfacePressureForceField example #1273
  • [examples] Fix caduceus #1392
  • [examples] Update the scene StandardTetrahedralFEMForceField.scn #1064

Cleanings

Architecture

Modules

  • [All] Clean namespace for some classes #1422
  • [All] Fix warnings due to visibility attribute #1421
  • [All] Clean due to doc #1398
  • [All] Clean warnings #1376
  • [All] Fix minor warnings #1388
  • [All] Fix warnings generated due to change in Aspects #1329
  • [All] Minor changes in comment or format #1411
  • [All] Multiple fixes scenes #1289
  • [All] Remove all DISPLAY_TIME define #1267
  • [All] Remove some compilation warning. #1343
  • [All] Replace usage of sleep functions for the std one #1394
  • [All] Uniform use of M_PI #1264
  • [All] Update header for cleaner future management #1375
  • [All] replace all serr by msg_error/msg_warning #1236
  • [SofaConstraint] Set the use of integration factor true by default #1369
  • [SofaDefaultType] BoundingBox : Remove annoying warnings #1425
  • [SofaGeneralEngine] Fix draw of the sphere in SphereROI #1318
  • [SofaGeneralEngine] Remove remaining BoxROI after SofaEngine move #1333
  • [SofaGeneralLoader] Allow flip normals in Gmsh and STL loaders #1418
  • [SofaGui] Pass QDocBrowser as an option #1315
  • [SofaKernel] Add Data bool d_checkTopology in Topology container to replace the use of CHECK_TOPOLOGY macro #1351
  • [SofaKernel] Clean occurrences of CHECK_TOPOLOGY macro in code #1352
  • [SofaKernel] Clean of Material.h/cpp #1346
  • [SofaKernel] Remove X11 dependency when SOFA_NO_OPENGL is enabled. #1370
  • [SofaKernel] Who hates warnings? #1258
  • [SofaKernel] replace all serr by msg_error/msg_warning #1237
  • [SofaSparseSolver] Move CSparse and metis into SofaSparseSolver #1357

Plugins / Projects

  • [CGALPlugin] Clean and pluginization #1308
  • [Geomagic] Move all code related to device model display in a dedicated class. #1366
  • [Geomagic] Fix compilation #1393
  • [ManifoldTopologies] Remove CHECK_TOPOLOGY macro occurrences #1353
  • [ManifoldTopologies] Update the license in init.cpp #1414
  • [OpenCTMPlugin] Fix compilation and clean before moving out #1359
  • [PluginExample] Update PluginExample #1356
  • [Regression] Update hash #1321
  • [SofaSphFluid] Clean SofaFluid plugin compilation warning. #1296

Examples / Scenes

  • [examples] Fix and remove 3 scenes with deprecated component #1355
  • [examples] Remove useless files and add MeshMatrixMass example #1257
  • [scenes] Fix scenes from alias #1292
  • [scenes] Remove scene warnings due to Rigid template #1295
  • [scenes] Fix alias warnings in scenes #1279

v19.12

Full log

Breaking

Architecture

  • [All] Improve extlibs integration #1137
  • [packages] Move all SofaComponent* + rename SofaAllCommonComponents #1155

Modules

  • [All] Add SingleLink to Topology to reveal all hidden GetMeshTopology #1183
  • [All] Remove ExtVecType #1055
  • [All] up change on GetMeshTopology #1223
  • [SofaBoundaryConditions] Apply doInternalUpdate API to ConstantForceField #1145
  • [SofaKernel] Replacing const char* with strings for group / help / widget etc. #1152
  • [SofaKernel] ADD: static method in events to retrieve the classname #1118
  • [SofaKernel] Set BaseData to non-persistant by default #1191
  • [SofaKernel] fix root's getPathName #1146

Improvements

Architecture

  • [CMake] v19.06 changes #1114
  • [extlibs] Set Eigen as external project + upgrade to 3.2.10 #1101
  • [extlibs] Upgrade Qwt extlib from 6.1.2 to 6.1.4 #1136

Modules

  • [All] Add SingleLink to Topology to reveal hidden GetMeshTopology Part 2 #1199
  • [All] Add update internal mechanism #1131
  • [All] Update the SOFA Guidelines #1135
  • [SofaBaseMechanics] Add topological change in barycentric mapping #1203
  • [SofaBaseMechanics] Use doUpdateInternal API in DiagonalMass #1150
  • [SofaBaseMechanics] Use doUpdateInternal API in UniformMass #1149
  • [SofaBaseTopology] Add new geometric methods in TetrahedronSetGeometryAlgorythms #1160
  • [SofaCore] Remove thread specific declaration #1129
  • [SofaGeneralEngine] Added Rigid to Euler orientation export #1141
  • [SofaHaptics] Add mutex and option to lock the ForceFeedback computation #1157
  • [SofaKernel] ADD: DataTypeInfo<vector> & improved doc #1113
  • [SofaKernel] Add a strict option to the BoxROI to prevent partially inside element to be in the box. #1127
  • [SofaKernel] Add fixed_array_algorithm + RGBAColor::lighten #1172
  • [SofaKernel] Add new events to detect Initialization & Simulation start. #1173
  • [SofaKernel] Add option in StiffSpringFF to track list of input springs #1093
  • [SofaKernel] Change several AdvancedTimer logs for a better tracking #1094
  • [SofaKernel] Consistent SofaFramework modules #1200
  • [SofaKernel] Make componentState a real data field #1168
  • [SofaMiscForceField] Use doUpdateInternal API in MeshMatrixMass #1151
  • [SofaQtQuick] Pass extra command-line arguments for python scenes in a more high-level function call #992
  • [SofaSphFluid] Add sprite-based point render #1194
  • [SofaSphFluid] Update rendering & other #1215

Plugins / Projects

  • [runSofa] Fix DataWidget display Speicherleck and long loading #1181

Examples / Scenes

  • [Examples] Add some mesh and PR1000 demo scene #1112

Bug Fixes

Architecture

  • [CMake][SofaFramework] Remove FFMPEG_exec target from the dependencies of SofaFramework #1177
  • [CMake] FIX Eigen finding #1175
  • [CMake] FIX unknown compiler option on VS2015 #1192
  • [SofaMacros] FIX default module version #1123
  • [SofaMacros] FIX sofa_set_install_relocatable escaped chars #1154

Modules

  • [All] Fix warnings #1206
  • [All] Fix warnings #1167
  • [All] Fix some warnings and OglAttribute handleTopologyChange #1159
  • [SofaBoundaryCondition] Fix FixedRotationConstraint when using more than one locked axis #1119
  • [SofaBaseMechanics] Make Uniform and DiagonalMass compatible with topo change #1212
  • [SofaBaseTopology] Fix SparseGrid obj loading + tests #1231
  • [SofaComponentAll] FIX SofaAllCommonComponents backward compatibility #1204
  • [SofaConstraint] Fix UncoupledConstraintCorrection topology change handling #1115
  • [SofaConstraint] Fix crash with PrecomputedConstraintCorrection #1230
  • [SofaCore] FIX decode functions in BaseClass #1222
  • [SofaDefaulttype] FIX too many ExtVec warnings with GCC #1140
  • [SofaExporter] Move bindings from SofaPython #1095
  • [SofaFramework] Add other orders for fromEuler() for Quaternions. #1221
  • [SofaFramework] Install the SofaSimulationCore target back into the SofaFramework package #1182
  • [SofaGuiQt] Fix unexpected symbol in CMakeLists #1132
  • [SofaGui] FIX missing find_package in SofaGuiConfig.cmake.in #1198
  • [SofaGui] Fix VideoRecorder #1138
  • [SofaGui] Prevent the GuiManager to store a pointer for the valid gui name #1108
  • [SofaHeadlessRecorder] FIX headlessRecorder_test #1174
  • [SofaHelper] FIX Eigen install path #1240
  • [SofaKernel] Add bloc access in basematrix #1143
  • [SofaKernel] Changes for Visual Studio and c++17 #1162
  • [SofaKernel] FIX regex in SofaMacros.cmake #1161
  • [SofaKernel] Fix alloc size #1142
  • [SofaKernel] Fix some AdvanceTimer log missing #1158
  • [SofaKernel] Fix useless warnings #1144
  • [SofaKernel] Several fix in draw methods and topology warnings #1111
  • [SofaKernel] Small Fix in CollisionModel #1202
  • [SofaKernel] Use links for input and output topologies of the barycentric mapping #1125
  • [SofaMisc] Fix compilation with SOFA_NO_OPENGL #1193
  • [SofaSimulationGraph] Fix CollisionGroupManager wrong search of deformable object node #1060
  • [SofaSimulationGraph] Stop DAGNode get parent topology process in BarycentricMapping #1176
  • [SofaSphFluid] Clean, Fix, Update ParticleSink #1195

Plugins / Projects

  • [All] Fix minor compilation issue in plugins #1106
  • [Carving plugin] Small fix at init. #1110
  • [Cgal plugin] Fix windows cmake dll path and add a scene example #958
  • [Regression_test] Update regression test references for CollisionGroup #1102

Cleanings

Architecture

  • [CMake] Use cmake_dependent_option for plugin tests #1164

Modules

  • [All] Fix order warnings #1239
  • [All] Fix override warning in option mode #1210
  • [All] Small cleaning on sout and serr #1234
  • [All] Standardize epsilons in SOFA #1049
  • [All] Code cleaning of multiple classes #1116
  • [All] Remove deprecated macro SOFA_TRANGLEFEM #1233
  • [All] Remove references to "isToPrint" because it's broken #1197
  • [All] Replace NULL by nullptr #1179
  • [All] Try to reduce the number of compilation warnings #1196
  • [SceneCreator] Pluginizing... #1109
  • [SofaBaseLinearSolver] Remove virtual function BaseLinearSolver::isMultiGroup #1063
  • [SofaBaseLinearSolver][FullMatrix] Restore fast clear function #1128
  • [SofaFramework] Remove (painful) check/warning with Rigids #1229
  • [SofaGUI] Split OpenGL and Qt dependency #1121
  • [SofaGeneralObjectInteraction] Create delegate functions in AttachConstraint #1185
  • [SofaGraphComponent] Update sceneCheckerAPI and deprecate MatrixMass #1107
  • [SofaHAPI] Fixes for HAPI #1189
  • [SofaKernel] ADD const specifier on notify methods in Node #1169
  • [SofaKernel] Remove deprecated SOFA_DEBUG macro #1232
  • [SofaMeshCollision] Clean deprecated code #1201
  • [SofaSphFluid] Clean code of ParticleSource and update scenes #1190
  • [SofaSphFluid] Reorder plugin code and scenes files #1165
  • [SofaSphFluid] Several clean in the plugin components #1186
  • [SofaSphFluid] missing namespace #1188
  • [SofaTest] CLEAN msg in Multi2Mapping_test #1097
  • [SofaTopologyMapping] Cleanups of some topological mappings + better initialization #1126
  • [SofaViewer] Prevent the GUI to ouput every CTRL actions in the console #1130

Plugins / Projects

  • [CGALPlugin] Some cleanups to CylinderMesh #1124
  • [CGal plugin][CImgPlugin] Image data moved from Image/ to CImgPlugin/ #1104
  • [Geomagic] Reorder plugin files for better modularization #1208
  • [ManifoldTopologies] Undust and clean #1156

Examples / Scenes

  • [Scenes] Clean some alias warnings #1098
  • [scenes] Change OglModel to use a MeshObjLoader instead of loading the mesh internally. #1096

v19.06

Full log

Breaking

Modules

  • [All] Run clang-tidy and update license headers #899
  • [All] Refactor the loading of Xsp files. #918
  • [SofaBaseTopology] Change triangles orientation in tetrahedron #878
  • [SofaBaseTopology] Major Change in Topology Containers #967
  • [SofaKernel] Refactor the MutationListener #917
  • [SofaKernel] Some Topology cleaning... #866
  • [SofaOpenglVisual] Fix ogl perf problem #1069

Modularizations

  • [SofaExporter] Modularize (+minor dependency cleaning) #915
  • [SofaHaptics] Modularize sofa haptics #945
  • [SofaOpenglVisual] Pluginize. #1080

Improvements

Architecture

  • [CMake] Rework sofa_generate_package #951
  • [CMake] SofaMacros.cmake: deprecating sofa_create_package #909

Modules

  • [All] Improve install and packaging #1018
  • [All] Plugins finding and loading #913
  • [All] Replace deprecated c++ standard binder component #908
  • [SofaBaseMechanics] BarycentricMapping: spatial hashing, handle limit cases #896
  • [SofaBaseTopology] Clean Topology logs and add AdvanceTimer logs #874
  • [SofaBaseVisual] Add default texcoord in VisualModel #933
  • [SofaConstraint] ADD control on constraint force in UniformConstraint #1027
  • [SofaCore] Add possibilities to draw lines on surfaces in DrawTool #937
  • [SofaCore] Collision visitor primitive tests count #930
  • [SofaCore] ADD Datacallback and datalink #911
  • [SofaEngine] Avoid Crash in BoxROI when rest_position is not yet defined #1031
  • [SofaExporter] Add option for Regression_test to check first and last iteration #1061
  • [SofaGeneralAnimationLoop] Improve MechanicalMatrixMapper #882
  • [SofaGraphComponent] Run SceneChecker at each load #938
  • [SofaGuiQt] Change the keyboard shortcut associated to camera mode #997
  • [SofaGuiQt] Add a profiling window based on AdvanceTimer records #1028
  • [SofaKernel] Some small changes in debug topology drawing #952
  • [SofaKernel] Update Static Solver #950
  • [SofaKernel] Rename TModels into CollisionModels and update all scenes #1034
  • [SofaKernel] Add a new video recorder class VideoRecorderFFMPEG #883
  • [SofaSimulationCore] Cpu task and scheduled thread support #970
  • [SofaSimulationCore] call BaseObject::draw() during the Transparent pass #929
  • [SofaTopologyMapping] Clean, fix, upgrade Tetra2TriangleTopologicalMapping #876

Plugins / Projects

  • [Geomagic] Add some better check at init and method to free driver #925
  • [Icons] EDIT Sofa icons #881
  • [MultiThreading] TaskAllocator Interface #906
  • [PluginExample] Update example + add comments #1053
  • [Regression] ADD Regression as external project #1052
  • [runSofa] ADD possibility to jump to source/instanciation of selected component #1013
  • [SofaCUDA] Fix cuda with latest API #912
  • [SofaPython] Add Sofa.hasViewer function #964
  • [SofaPython] Change Base.addNewData #1004

Examples / Scenes

  • [examples] Rename TModels into CollisionModels and update all scenes #1034

Bug Fixes

Architecture

  • [CMake] Add check to prevent the inclusion of non-existant file in cmake 3.13 #897
  • [CMake] Fix relocatable plugins #1059
  • [CMake] FIX: exporting options in SofaFrameworkConfig.cmake #927
  • [CMake] FIX: wrong paths of installed headers in SofaBaseMechanics #887
  • [CMake] FIX build/install plugins directory #959

Modules

  • [All] Three small fixes in SofaBaseLinearSolver, SofaBoundaryCondition, runSofa #931
  • [All] FIXES made for RoboSoft2019 #1003
  • [All] Fix some warnings #873
  • [All] Several bug fixes #985
  • [All] Some fixes to have a ... green dashboard! #982
  • [All] Fix compilation with SOFA_NO_OPENGL flag #1032
  • [SofaConstraint] Convert static sized arrays to dynamic ones in GenericConstraintSolver #920
  • [SofaBaseMechanics] Fix barycentric mapping again #924
  • [SofaBaseTopology] Fix Crash when loading a vtk file generated by Gmsh using TetrahedronSetTopologyContainer as container #1008
  • [SofaBaseTopology] Fix right setDirty/clean topologyData #889
  • [SofaBaseTopology][DrawTools] Some fix/update in topology internal draw methods. #877
  • [SofaBaseTopology] Yet another fix in Tetra2triangleTopologicalMapping #998
  • [SofaBaseTopology] Clean, fix, upgrade Triangle2EdgeTopologicalMapping #875
  • [SofaBaseTopology] Fix crashes in Tetra2TriangleTopologicalMapping #960
  • [SofaBoundaryCondition] Fix draw function in ConstantForcefield #1017
  • [SofaDeformable] FIX issue 928 #942
  • [SofaDeformable] Merge 2 ctor in SpringForceField #948
  • [SofaExporter] FIX: out-of-tree include of SofaExporter header files #975
  • [SofaGeneralLoader] Compute subElement by default for Gmsh format #986
  • [SofaGeneralObjectInteraction] Fix AttachConstraint in case of FreeMotion (LM solving) #949
  • [SofaGeneralObjectInteraction] Fix attach constraint radius #650
  • [SofaGui] Fix missing profiling timers for BatchGUI and HeadlessRecorder #890
  • [SofaGuiGlut] Fix compilation #1044
  • [SofaGuiQt] FIX: component/nodes ordering in runSofa scene graph #1001
  • [SofaGuiQt] REMOVE: public export of target SofaExporter #963
  • [SofaGuiQt] Fix: several QWidget do not have a parent #1030
  • [SofaHelper] FIX compilation on Visual Studio 2015 with QWT plugin #935
  • [SofaHelper] FIX WinDepPack INSTALL_INTERFACE #1042
  • [SofaHelper] REMOVE PluginManager::m_searchPaths #947
  • [SofaKernel] Clean & Fix TopologyChangeVisitor and StateChangeVisitor behavior #880
  • [SofaKernel] Clean output data when doUpdate in BoxROI #1056
  • [SofaKernel] FIX deprecation message related to template types. #939
  • [SofaKernel] FIX in TetrahedronFEMForceField & TetrahedronSetTopologyAlgorithm #973
  • [SofaKernel] FIX operator>> in Mat.h and add corresponding test. #993
  • [SofaKernel] FIX: A few fix to compile on Mac OSX Xcode 9 and Linux gcc 7.3.0 #969
  • [SofaKernel] FIX: force name data to contain something #1009
  • [SofaKernel] Fix error in MapperHexahedron and MapperQuad barycentric coef computation #1057
  • [SofaKernel] Fix: remove unwanted AdvanceTimer::begin command #1029
  • [SofaKernel] Remove warnings #968
  • [SofaKernel] several small fix #953
  • [SofaLoader] Fix positions when handleSeams is activated in MeshObjLoader #923
  • [SofaMeshCollision] Fix TriangleModel to handle topology changes #903
  • [SofaSimulationCore] Remove unjustified Assert in getSimulation() #1082
  • [SofaSimulationCore] FIX CollisionVisitor::processCollisionPipeline #962
  • [SofaTests] Fix small bugs in the Multi2Mapping_test #1078

Plugins / Projects

  • [CImgPlugin] FIX: messed up package prefix in CImg #921
  • [Geomagic] FIX compilation error in Geomagic plugin with removal of SOFA_FLOAT/DOUBLE #898
  • [image] Fix image_gui plugin loading #1015
  • [image] Message API is needed even if no python #1068
  • [runSofa] FIX the opening of ModifyObject view. #1010
  • [runSofa] Fix runSofa -a option with a gui. #1058
  • [runSofa] User experience fixes in the ModifyData view. #1011
  • [Sensable] Fix the compilation of the Sensable plugin #1019
  • [SofaCUDA] Compilation error fix (CudaStandardTetrahedralFEMForceField.cu) #991
  • [SofaCUDA] Fix several Cuda example scenes #1000
  • [SofaCUDA] Fix windows compilation. #966
  • [SofaPython] FIX allow the derivTypeFromParentValue to work with node. #984
  • [SofaPython] FIX example broken by PR#459 #1020
  • [SofaPython] FIX the broken Binding_Data::setValue() #1006
  • [SofaPython] Fix duplicate symbol #1036
  • [SofaPython] FIX: removing PythonLibs target from SofaPython #891
  • [SofaPython] REMOVE: public export of target SofaExporter #963

Examples / Scenes

  • [examples] Remove warnings in Demos/ scenes #1021
  • [scenes] Fix chainAll demo scenario #987

Cleanings

Modules

  • [All] For each data field's with a "filename" alias flip it with the data's name. #1024
  • [All] Quick changes diffusion and mass #983
  • [All] Remove duplicate ctor + prettify some code #1054
  • [All] Replace serr with the new msg_error() API. #916
  • [All] Several STC fixes #1048
  • [All] Sofa defrost sprint week2 #884
  • [All] minor cleaning of warnings and bugfix #886
  • [All] Remove bunch of warnings (again) #1065
  • [All] remove #ifdef SOFA_HAVE_GLEW #1077
  • [SofaLoader] Change error into warning in MeshVTKLoader #1037
  • [SofaConstraint] Replaced sout calls by msg_info() in LCPConstraintSolver #981
  • [SofaGeneralLinearSolver] Clean BTDLinearSolver #907
  • [SofaHaptics] Replace deprecated INCLUDE_ROOT_DIR in CMakeLists.txt #1023
  • [SofaKernel] Brainless Warnings cleaning #971
  • [SofaKernel] Minor code refactor in BaseData & new StringUtils functions. #860
  • [SofaKernel] Refactor DataTrackerEngine so it match the DataCallback #1073
  • [SofaKernel] Remove annoying warning #1062
  • [SofaKernel] Remove boost::locale dependency #1033
  • [SofaKernel] Remove usage of helper::system::atomic (replaced by STL's) #1035
  • [SofaKernel] Several changes in Topology components #999
  • [SofaKernel] minor cleaning in mesh loader #1025
  • [SofaKernel] Remove multigroup option in MatrixLinearSolver #901
  • [SofaRigid] Clean JointSpringFF #850
  • [SofaRigid] Cosmetic clean in RigidRigidMapping & msg_* update. #1005
  • [SofaSimpleFem] Use msg and size_t in TetraDiff #1016

Plugins / Projects

  • [image] Add warning guiding users regarding pluginization of DiffusionSolver #1067
  • [Modeler] Deactivate Modeler by default, since it is deprecated #972

Examples / Scenes

  • [Scenes] Apply script on all scenes using VisualModel/OglModel #1081

v18.12

Full log

Deprecated

Removed in v18.12

  • [SofaBoundaryCondition] BuoyantForceField #457
  • [SofaBoundaryCondition] VaccumSphereForceField #457
  • [SofaHelper] Utils::getPluginDirectory() #518 - Use PluginRepository.getFirstPath() instead
  • [SofaMisc] ParallelCGLinearSolver #457
  • [SofaMiscForceField] ForceMaskOff #457
  • [SofaMiscForceField] LineBendingSprings #457
  • [SofaMiscForceField] WashingMachineForceField #457
  • [SofaMiscForceField] LennardJonesForceField #457
  • [SofaMiscMapping] CatmullRomSplineMapping #457
  • [SofaMiscMapping] CenterPointMechanicalMapping #457
  • [SofaMiscMapping] CurveMapping #457
  • [SofaMiscMapping] ExternalInterpolationMapping #457
  • [SofaMiscMapping] ProjectionToLineMapping #457
  • [SofaMiscMapping] ProjectionToPlaneMapping
  • [SofaOpenglVisual] OglCylinderModel #457
  • [SofaOpenglVisual] OglGrid #457
  • [SofaOpenglVisual] OglRenderingSRGB #457
  • [SofaOpenglVisual] OglLineAxis #457
  • [SofaOpenglVisual] OglSceneFrame #457
  • [SofaUserInteraction] ArticulatedHierarchyBVHController #457
  • [SofaUserInteraction] ArticulatedHierarchyController #457
  • [SofaUserInteraction] DisabledContact #457
  • [SofaUserInteraction] EdgeSetController #457
  • [SofaUserInteraction] GraspingManager #457
  • [SofaUserInteraction] InterpolationController #457
  • [SofaUserInteraction] MechanicalStateControllerOmni #457
  • [SofaUserInteraction] NodeToggleController #457

Breaking

Modules

  • [SofaBaseMechanics][SofaMiscForceField] Homogeneization of mass components in SOFA #637
  • [SofaBaseMechanics] Clean barycentric mapping #797
  • [SofaBoundaryCondition] Refactor FixedPlaneConstraint (breaking) #803
  • [SofaFramework] [BREAKING] Replacing DataEngine with SimpleDataEngine #814
  • [SofaFramework] [BREAKING] Rename: data tracker has changed #822
  • [SofaPreconditioner] modularization #668
  • [SofaSparseSolver] modularization #668

Improvements

Architecture

  • [CMake] use ccache if available #692
  • [Cmake] Add a findCython.cmake #734
  • [CMake] ADD QtIFW generator + improvements #796
  • [SofaMacros] ADD CMake macro to create pybind11 & cython targets and modules #859(sofa-framework#859)

Modules

  • [All] Use drawtool everywhere #704
  • [All] Sofa add mechanical matrix mapper #721
  • [SofaBaseTopology] Add battery of tests on topology containers #708
  • [SofaBaseTopology] Topology change propagation to Mechanical State #838
  • [SofaBaseMechanics] Optimize barycentric mapping initialization #798
  • [SofaBoundaryCondition] Factorize partial fixedconstraint #718
  • [SofaConstraint] add a force data field in SlidingConstraint #780
  • [SofaConstraint] ADD Data to show constraint forces #840
  • [SofaConstraint] allow call of constraints' storeLambda() #854
  • [SofaCore] Add new (simpler) DataEngine implementation #760
  • [SofaExporter] ADD in WriteState all required tests on data and clean export with msg API #714
  • [SofaFramework] Improve external dirs fetching in SofaMacros #759
  • [SofaGeneralAnimationLoop] Improvement on MMMapper #772
  • [SofaHelper] EDIT FileSystem and FileRepository for regression tests #830
  • [SofaKernel] Improve Displayflags #671
  • [SofaKernel] Add a "sofa_add_module" in SofaMacro.cmake #732
  • [SofaKernel] use string in base object description #862
  • [SofaMeshCollision] TriangleModel optimization when topology changes occur #839
  • [SofaSparseSolver] ADD saveMatrixToFile to SparseLDLSolver #845
  • [SofaTest] ADD a PrintTo method so test failure shows human readable informations. #730
  • [VisualModel] Improve the messages when loading mesh inside VisualModel #778
  • [WriteState] minor fix with the time attribute, default values #776

Plugins / Projects

  • [Geomagic] ADD an inputForceFeedback data in Geomagic #648
  • [Geomagic] Fix dll export and some enhancements #786
  • [MultiThreading] removed the boost thread dependency #701
  • [MultiThreading] New components and Task scheduler classes refactoring #745
  • [MultiThreading] Add Image plugin Data types in DataExchange component #770
  • [MultiThreading] TaskScheduler Interface #775
  • [runSofa] Add data field value change on mouse move #750
  • [SofaCarving] Refresh and enhancement #712
  • [SofaCarving] plugin enhancement #787
  • [SofaPython] ADD forwarding of onMouseMove event into the script controller #731
  • [SofaPython] ADD: Bindings for BoundingBox #736
  • [SofaPython][PSDE] Psde derive io #742
  • [SofaPython][PSDE] Update on demand as designed initially #751
  • [SofaPython] ADD a custom dir method in Binding_Base. #762
  • [SofaPython] add getLinkedBase to the binding of a link. #843
  • [SofaPython] ADD binding python to getCategories #868

Bug Fixes

Architecture

  • [CMake] FIX: cyclic recursion #766
  • [CMake] Backport fixes #791
  • [CMake] Fix compilation issues due to CPackNSIS #867
  • [CMake] Add check to prevent the inclusion of non-existant file in cmake 3.13 #897

Modules

  • [All] ISSofa bugfix, lot of fixes #756
  • [All] FIX Windows linkage #910
  • [SofaGuiQt] Change method to allow antialiased screenshots in QtViewer #728
  • [SofaBaseMechanics] Fix warning scene mass #779
  • [SofaBaseMechanics] FIX DiagonalMass_test #832
  • [SofaBaseTopology] Fix SparseGridTopology initialization with an input mesh #670
  • [SofaBoundaryCondition] FIX AffineMovementConstraint orientation issue #824
  • [SofaCarving] Modify the CMake config file to allow other plugins link to Sofa Carving #781
  • [SofaCore] FIX: enable ExtVecXf mappings with double floating type #827
  • [SofaDeformable] Fix MeshSpring ForceField and Loader #815
  • [SofaFramework] Keep SOFA_EXTERN_TEMPLATE macro definition #870
  • [SofaGui] ADD option to enable VSync (default: OFF) #722
  • [SofaOpenglVisual] Rollback removal of Ogl components #905
  • [SofaKernel] FIX bug in toEulerVector #399
  • [SofaKernel] FIX segfault created by static initialisers on OSX/clang compiler #642
  • [SofaKernel] Fix: correct path writing in sofa_set_python_directory macro #763
  • [SofaKernel] Check if Quaternion has norm 1 #790
  • [SofaPreconditioner] FIX ShewchukPCGLinearSolver #737

Plugins / Projects

  • [CGALPlugin] fix compilation #783
  • [CGALPlugin] Fix compilation for cgal 4.12+ (cgal::polyhedron_3 is now forward declared) #812
  • [CImgPlugin] CMake/Mac: lower priority for XCode's libpng #720
  • [Geomagic] Fix broken behavior #761
  • [Geomagic] Fix scenes #858
  • [Multithreading] FIX compiling error on Mac #727
  • [MultiThreading] Fix Livers scenes crash #792
  • [runSofa] ADD Modules to plugin_list.conf.default #753
  • [SofaPython][examples] FIX: Fixing the scene... and the typo in the name #765
  • [Tutorials] FIX oneTetrahedron and chainHybrid #773

Examples / Scenes

  • [examples] Fix TopologySurfaceDifferentMesh.scn #716
  • [examples] Fix the examples missing a #748
  • [examples] Fix scenes having issue with CollisionGroup #821

Cleanings

Modules

  • [All] Fix some recent compilation warnings #726
  • [All] Replace some int/unit by size_t #729
  • [All] Fix some C4661 warnings #738
  • [All] FIX warnings #739
  • [All] Fix some compilation warnings #755
  • [All] FIX a bunch of static-analysis errors (cppcheck) #782
  • [All] Remove SOFA_DECL_CLASS and SOFA_LINK_CLASS #837
  • [All] Remove SOFA_SUPPORT_MOVING_FRAMES and SOFA_SUPPORT_MULTIRESOLUTION #849
  • [SofaBaseCollision] CLEAN CylinderModel #847
  • [SofaBaseLinearSolver] CLEAN GraphScatteredTypes #844
  • [SofaFramework] Various cleaning (non-breaking) #841
  • [SofaFramework] CLEAN: removing unused PS3 files #851
  • [SofaGeneralSimpleFEM] Clean BeamFemForceField #846
  • [SofaHelper] Change drawTriangle and drawQuad with internal functions #813
  • [SofaHelper] Update ComponentChange with removed Components #905
  • [SofaKernel] Remove commented code since years in SofaBaseMechanics #733
  • [SofaKernel] Move ScriptEvent class from SofaPython to core/objectModel #764
  • [SofaMiscFem] Clean BaseMaterial::handleTopologyChange #817
  • [SofaMiscMapping] Clean DeformableOnRigidFrameMapping #848
  • [SofaSimpleFem] Stc clean simplefem #826

Plugins / Projects

  • [Multithreading] Move TaskScheduler files from MultiThreading plugin to SofaKernel #805

Examples / Scenes

  • [examples] Remove scenes about deprecated components #922

v18.06

Full log

Deprecated

Will be removed in v18.06

  • [SofaHelper] Utils::getPluginDirectory() #518 - Use PluginRepository.getFirstPath() instead

Will be removed in v18.12

  • [SofaBoundaryCondition] BuoyantForceField #457
  • [SofaBoundaryCondition] VaccumSphereForceField #457
  • [SofaMisc] ParallelCGLinearSolver #457
  • [SofaMiscForceField] ForceMaskOff #457
  • [SofaMiscForceField] LineBendingSprings #457
  • [SofaMiscForceField] WashingMachineForceField #457
  • [SofaMiscForceField] LennardJonesForceField #457
  • [SofaMiscMapping] CatmullRomSplineMapping #457
  • [SofaMiscMapping] CenterPointMechanicalMapping #457
  • [SofaMiscMapping] CurveMapping #457
  • [SofaMiscMapping] ExternalInterpolationMapping #457
  • [SofaMiscMapping] ProjectionToLineMapping #457
  • [SofaMiscMapping] ProjectionToPlaneMapping
  • [SofaOpenglVisual] OglCylinderModel #457
  • [SofaOpenglVisual] OglGrid #457
  • [SofaOpenglVisual] OglRenderingSRGB #457
  • [SofaOpenglVisual] OglLineAxis #457
  • [SofaOpenglVisual] OglSceneFrame
  • [SofaUserInteraction] ArticulatedHierarchyBVHController #457
  • [SofaUserInteraction] ArticulatedHierarchyController #457
  • [SofaUserInteraction] DisabledContact #457
  • [SofaUserInteraction] EdgeSetController #457
  • [SofaUserInteraction] GraspingManager #457
  • [SofaUserInteraction] InterpolationController #457
  • [SofaUserInteraction] MechanicalStateControllerOmni #457
  • [SofaUserInteraction] NodeToggleController #457

Breaking

Modules

  • [SofaConstraint] Update FreeMotionAnimationLoop so that it can compute a linearised version of the constraint force. #459
  • [SofaCore] Update FreeMotionAnimationLoop so that it can compute a linearised version of the constraint force. #459
  • [SofaHelper] Unifying the way we report file related errors #669

Improvements

Architecture

  • [CMake] ADD external projects handling #649
  • [CMake] ADD the CMAKE_WARN_DEPRECATED option in SOFA #662
  • [CMake] Improve SOFA installation and packaging #635
  • [CMake] Cleans for packaging #789

Modules

  • [All] Refactoring in Camera, BackgroundSetting and Light #676
  • [SofaBaseLinearSolver] Improve warning emission for CG #658
  • [SofaBaseLinearSolver] Add ability to activate printing of debug information at runtime #667
  • [SofaGeneralImplicitOdeSolver] FIX data field name in VariationalSymplecticSolver #624
  • [SofaGraphComponent] ADD alias usage detection #702
  • [SofaLoader] ADD support to load VTK polylines in legacy formated files #576
  • [SofaMiscMapping] Fix rigid barycentric mapping #710
  • [SofaHelper] PluginManager now checks for file existence instead of library extension match. #621

Plugins / Projects

  • [HeadlessRecorder] ADD frameskip option to headless recorder #615
  • [HeadlessRecorder] Remove avcodec dependency in HeadlessRecorder.h #752
  • [runSofa] Save&restore the scenegraph state when live-code & add info panel #657
  • [SofaPython] PythonScriptDataEngine (PSDE) #583
  • [SofaPython] Small fix & new features. #656

Tools

  • [tools] FIX sofa-launcher stdout #592

Bug Fixes

Modules

  • [All] FIX VS2017 build (Windows) #630
  • [All] Fix computeBBox() #634
  • [All] FIX warnings #584
  • [All] Various small changes in error messages & bugfix from defrost branches #660
  • [SofaConstraint] FIX: Moving semicolon under preprocessor define #680
  • [SofaEngine] FIX Bug in BoxROI that is not properly initialized #627
  • [SofaFramework] Fix plugin list configuration #645
  • [SofaGraphComponent] FIX SceneChecker_test + ADD alias test #711
  • [SofaGraphComponent] FIX SceneCheck build on MacOS #719
  • [SofaGuiQt] FIX missing resources #758
  • [SofaGeneralEngine] FIX disabled tests #675
  • [SofaHelper] More robust method to test end of string #617
  • [SofaKernel] FIX macro issue resulted from the #include cleaning. #672
  • [SofaMiscFem] FIX dependencies #588
  • [SofaOpenglVisual] FIX MacOS crash in batch mode #646
  • [SofaSimulationGraph] FIX dependencies #588
  • [SofaSparseSolver] FIX SparseLDL crash and add proper SOFA_FLOAT/DOUBLE mangement #655

Plugins / Projects

  • [CGALPlugin] FIX compilation issue with recent version of CGAL (4.11) & Ubunu 18.04 LTS #664
  • [CImgPlugin] Export CImg_CFLAGS #595
  • [CImgPlugin] FIX CMakeLists install fail since pluginization #609
  • [CImgPlugin] FIX malformed cflag append #622
  • [HeadlessRecorder] Fix headless recorder stream definition #666
  • [MultiThreading] FIX: add createSubelements param in MeshGmshLoader #626
  • [runSofa] Fix compilation when SofaGuiQt is not activated #599
  • [runSofa] ADD infinite iterations option to batch gui #613
  • [runSofa] FIX missing resources #758
  • [SofaDistanceGrid] ADD .scene-tests to ignore scene #594
  • [SofaPython] FIX build for MacOS >10.13.0 #614

Examples / Scenes

  • FIX collision of the fontain example #612
  • FIX failing scenes on CI #641
  • FIX missing RequiredPlugin #628

Extlibs

  • [extlibs/gtest] Update gtest & clean the CMakeLists.txt #604

Cleanings

Architecture

  • [CMake] Remove the option SOFA_GUI_INTERACTION and its associated codes/macro #643

Modules

  • [All] CMake: Remove COMPONENTSET, keep DEPRECATED #586
  • [All] CLEAN topology classes #693
  • [SofaHelper] CLEAN commented code and double parentheses in Messaging.h #587
  • [SofaKernel] Header include cleanup #638
  • [SofaKernel] Remove unused function "renumberConstraintId" #691

Plugins / Projects

  • [CImgPlugin] Less scary config warnings #607
  • [HeadlessRecorder] Handle errors in target config #608
  • [SofaGUI] Move GlutGUI to projects and remove all glut references in SofaFramework #598
  • [SofaGUI] CMake: Remove useless if block in qt CMakelists.txt #590
  • [SofaPhysicsAPI] FIX: remove the include of glut #659

v17.12

Full log

Deprecated

Kernel modules

  • Will be removed in v17.12

    • [All]
    • [SofaDefaultType]
      • LaparoscopicRigidType #457 - not used/dont compiled for a really long time

  • Will be removed in v18.06

    • [SofaHelper]
      • Utils::getPluginDirectory() #518 - Use PluginRepository.getFirstPath() instead

Other modules

  • Will be removed in v18.12
    • [SofaBoundaryCondition]
      • BuoyantForceField #457
      • VaccumSphereForceField #457
    • [SofaMisc]
      • ParallelCGLinearSolver #457
    • [SofaMiscForceField]
      • ForceMaskOff #457
      • LineBendingSprings #457
      • WashingMachineForceField #457
      • LennardJonesForceField #457
    • [SofaMiscMapping]
      • CatmullRomSplineMapping #457
      • CenterPointMechanicalMapping #457
      • CurveMapping #457
      • ExternalInterpolationMapping #457
      • ProjectionToLineMapping #457
      • ProjectionToPlaneMapping
    • [SofaOpenglVisual]
      • OglCylinderModel #457
      • OglGrid #457
      • OglRenderingSRGB #457
      • OglLineAxis #457
      • OglSceneFrame
    • [SofaUserInteraction]
      • AddRecordedCameraPerformer #457
      • ArticulatedHierarchyBVHController #457
      • ArticulatedHierarchyController #457
      • DisabledContact #457
      • EdgeSetController #457
      • FixParticlePerformer #457
      • GraspingManager #457
      • InciseAlongPathPerformer #457
      • InterpolationController #457
      • MechanicalStateControllerOmni #457
      • NodeToggleController #457
      • RemovePrimitivePerformer #457
      • StartNavigationPerformer #457
      • SuturePointPerformer #457

Breaking

Kernel modules

  • [All]
    • issofa_visitors: Changing the way projective constraints are propagated in visitors #216
  • [SofaDeformable]
    • Change how rest shape is given in RestShapeSpringsForceField #315

Other modules

  • [SofaHelper]
    • Rewrite ArgumentParser #513
  • [SofaValidation]
    • ADD Monitor test #312

Improvements

Kernel modules

  • [All]
    • issofa_topology: Improvement, BugFix and Cleaning on Topology #243
    • issofa_constraintsolving: improve constraints #484
    • Improve File:line info in error message (for python and xml error reporting) #314
  • [SofaDeformable]
    • issofa_meshspringff #497
    • issofa_springff #498
  • [SofaHelper]
    • add ability to use NoArgument for BaseCreator and Factory #385
    • Remove legacy ImageBMP/ImagePNG and ImageQt #424
    • Improve advanced timer #468
  • [SofaLoader]
    • ADD normals and vectors to Legacy vtk import #536
  • [SofaSimpleFem]
    • Add check of vector size in TetrahedronFEMForceField #341

Other modules

  • [All]
    • Fix default value rayleigh params #350
    • PSL branch prerequisites #410
    • template alias sptr for downsizing the include graph #436
    • Removing the typedef files + SOFA_DECL + SOFA_LINK #453
    • CHANGE USE_MASK option to off by default #532
  • [SofaBoundaryCondition]
    • ADD flag PROJECTVELOCITY #288
    • make LinearMovementConstraint accept absolute movements #394
  • [SofaCore]
    • Add some read/write free method to construct Data Read/WriteAccessor #450
  • [SofaDefaulttype]
    • MapMapSparseMatrix conversion utils with Eigen Sparse #452
    • multTranspose method between MapMapSparseMatrix and BaseVector #456
  • [SofaDeformable]
    • Rest shape can now be given using SingleLink #315
    • Add AngularSpringForceField #334
  • [SofaEulerianFluid]
    • Pluginizing the module #396
  • [SofaExporter]
    • Clean & test the exporter #372
  • [SofaGraphComponent]
    • Add SceneCheckerVisitor to detect missing RequiredPlugin #306
    • Add a mechanism (SceneChecker) to report API & SceneChange to users #329
    • Refactor the SceneChecker and add a new SceneChecker to test dumplicated names #392
  • [SofaGeneralEngine]
    • Add test and minor cleaning for IndexValueMapper #319
    • Add a computeBBox to the SmoothMeshEngine #409
  • [SofaGeneralObjectInteraction]
    • issofa_attachconstraint #501
  • [SofaMisc]
    • Add a data repository at start-up time #402
  • [SofaMiscCollision]
    • Pluginizing the module #453
  • [SofaMiscFem]
    • Add hyperelasticity fem code in SOFA #349
  • [SofaSimpleFem]
    • ADD computeBBox and test to HexaFEMForceField #289
  • [SofaSphFluid]
    • Pluginizing the module #453
  • [SofaVolumetricData]
    • Split the module in two plugins #389

Plugins / Projects

  • [CGALPlugin]
    • Add new functionality for mesh generation from image: definition of features #294
  • [meshconv]
    • Improve the CMake config of meshconv requiring miniflowVR to compile #358
  • [PSL]
    • Experimental : Add PSL for 17.12 #541
  • [runSofa]
    • autoload plugins (2nd version) #301
    • Extend the live coding support, message API available for nodes, add an openInEditor #337
    • add verification if help is not null from displayed data #382
    • improve the html DocBrowser #540
  • [SceneChecker]
    • Add mechanism to report API & SceneChange to users #329
  • [SofaDistanceGrid]
    • Pluginizing SofaVolumetricData #389
  • [SofaImplicitField]
    • Pluginizing SofaVolumetricData #389
  • [SofaMiscCollision]
    • Pluginizing the module #453
  • [SofaPython]
    • Add unicode to string convertion and a warning message in Binding_BaseContext::pythonToSofaDataString #313
    • Add unicode to string convertion in Binding_BaseData::SetDataValuePython #313
    • Add a test #313
    • Add GIL management #326
    • Add support for Sofa.msg_ with emitter other than a string #335
    • Adding new features for AdvancedTimer #360
    • forward sys.argv to python scripts #368
    • sparse matrix aliasing scipy/eigen #411
  • [SofaSphFluid]
    • Pluginizing the module #453

Other

  • [Tools]
    • Update astyle config #550

Bug Fixes

Kernel modules

  • [All]
    • CMake: Fix and clean boost, when using Sofa as an external lib #421
    • Fix computeBBox functions #527
    • CMake: FIX Boost::program_options finding in install #618
  • [SofaBaseLinearSolver]
    • FIX no step if condition on denominator is met at first step #521
    • FIX breaking condition in CG at first step regarding threshold #556
  • [SofaBaseMechanics]
    • Make sure the mechanical object's state vectors size matches their respective argument size #406
  • [SofaBaseTopology]
    • FIX wrong clean in PointSetTopologyModifier #380
  • [SofaComponentCommon]
    • Always register all its components in the object factory #488
  • [SofaCore]
    • FIX CreateString problem on root node #377
    • FIX don't inline exported functions #449
  • [SofaDefaultType]
    • FIX Mat::transpose() and Mat::invert() #317
    • Correct CMake include_directories directive for SofaDefaultType target's #403
    • Fix compilation errors when working with transform class #506
  • [SofaHelper]
    • Fix CUDA compilation with pointer of data #320
    • FIX livecoding of shaders #415
    • fixing Polynomial_LD #442
    • Replacing afficheResult with resultToString #473
    • FIX Remove override warnings #520
    • Fix memory leak while capturing screenshot #533
    • FIX Windows relative path from runSofa #568
  • [SofaRigid]
    • RigidMapping: fixed setRepartition backward compatibility #441
  • [SofaSimulationCommon]
    • Fix a minor regression introduced during the post-sprint #476
  • [SofaSimulationCore]
    • Add stop in add_mbktomatrixVisitor #439

Other modules

  • [All]
    • Fix warnings and strange double incrementation on iterator #364
    • installing gtest headers for separate plugin builds #395
    • Fix override warnings #423
    • FIX Sofa installation failure (tries to install non-existing files) #470
    • ADD _d suffix for debug libs #511
  • [SofaBoundaryCondition]
    • Fix LinearForceField that disappears #525
    • FIX Removed incorrect warning from LinearForceField #384
  • [SofaConstraint]
    • Fix error due to MacOS >= 10.11 using a relative filename #325
    • Fix issue in GenericConstraintCorrection #567
  • [SofaDeformable]
    • Fix RestShapeSpringsForceField #367
  • [SofaExporter]
    • FIX allow to extend VTKExporter in a plugin #309
  • [SofaGeneralEngine]
    • Fix some XyzTransformMatrixEngine::update() function #343
  • [SofaGeneralImplicitOdeSolver]
  • [SofaGraphComponent]
    • Fix the test that was wrong and thus failing in SceneChecker #405
    • Fix a crashing bug in SceneCheckAPIChange. #479
    • FIX SceneChecker & RequiredPlugin #563
  • [SofaGeneralObjectInteraction]
    • Remove stiffness multiplicator in SpringForceField #290
  • [SofaMiscFem]
    • Fix FastTetrahedralCorotationalFF topology change #554
  • [SofaOpenglVisual]
    • Fix a bug crashing sofa when the textures cannot be loaded. #474

Extlibs

  • [CImg]
    • Refactor CImg & CImgPlugin #562
  • [Eigen]
    • Warning fix with eigen when compiling with msvc #447
  • [libQGLViewer]
    • FIX missing headers #461
    • Update libQGLViewer to 2.7.1 #545

Plugins / Projects

  • [CGALPlugin]
    • Fix build problem #351
    • FIX build error with CGAL > 4.9.1 #515
  • [CImgPlugin]
    • Use sofa cmake command to create proper package #544
    • Refactor CImg & CImgPlugin #562
    • prevent INT32 redefinition by libjpeg on Windows #566
  • [ColladaSceneLoader]
    • FIX Assimp copy on Windows #504
  • [Flexible]
    • Refactor CImg & CImgPlugin #562
  • [image]
    • Refactor CImg & CImgPlugin #562
  • [Meshconv]
    • fix build if no miniflowVR #358
  • [MultiThreading]
    • FIX: examples installation #299
    • Fix build with Boost 1.64.0 #359
    • FIX Windows dll loading #507
  • [runSofa]
    • FIX plugin config copy on Windows #451
    • remove non-ASCII chars in string #327
    • FIX PluginRepository initialization #502
  • [SofaCUDA]
    • Fix compilation problem with cuda. #320
    • Fix: Headers of the SofaCUDA plugin are now installed in the include folder #383
    • FIX Configuration/compilation issue with CUDA plugin #523
    • Fix linearforcefield that disappears #525
  • [SofaGui]
    • FIX draw scenes on classical and retina screens #311
    • Fixes #183 : Use the qt menu instead of the native one in Mac OS #366
    • fix ImageBMP issue + remove Laparoscopic stuff #499
    • Pickhandler minor fixs #522
    • Fix: Intel graphics on linux now overrides the core profile context #526
  • [SofaImplicitField]
    • Fix package configuration #422
  • [SofaPhysicsAPI]
    • FIX: compilation due to Sofa main API changes #549
  • [SofaPython]
    • Fix python live coding that is broken #414
    • FIX crash in python script when visualizing advanced timer output #458
    • FIX error in script for plotting advancedTimer output #519
    • Fix python unicode data #313
  • [SofaSPHFluid]
    • Fix invalid plugin initialization. #467
  • [SofaVolumetricData]
    • Fix package configuration #422
  • [SceneCreator]
    • FIX build error with AppleClang 6.0.0.6000051 #483
  • [THMPGSpatialHashing]
    • Fix build with Boost 1.64.0 #359

Scenes

  • Fix scenes #310
  • Fix scenes with bad RegularGrid position relative to 270 #324
  • Fix scenes errors and crashes #505
  • FIX all scenes failures 17.12 #565

Cleanings

Kernel modules

  • [All]
    • replace a bunch of std::cerr, std::cout, prinf to use msg_* instead #339
    • More std::cout to msg_* cleaning #370
    • FIX removed compilation warnings #386
    • Clean BaseLoader & Remove un-needed #includes #393
    • Remove last direct calls of OpenGL in modules #425
    • warning removal #454
    • Refactor SofaTest to cut dependencies #471
    • Modularizing config.h #475
    • EDIT: use PluginRepository instead of Utils::getPluginDirectory #518
  • [SofaBaseLinearSolver]
    • Add comments in the CGLinearSolver #469
  • [SofaBaseVisual]
    • Clean API message #503
  • [SofaDefaultType]
    • remove warning generated by MapMapSparseMatrixEigenUtils #485
  • [SofaHelper]
    • mute extlibs warnings #397
    • FileMonitor_windows compilation #448
    • Clean API message #503

Other modules

  • [SofaGeneralEngine]
    • add test and minor cleaning for IndexValueMapper #319
  • [SofaGeneralObjectInteraction]
    • Remove stiffness multiplicator in SpringForceField #290
  • [SofaValidation]
    • move code to set default folder for monitor to init function #500

Plugins / Projects

  • [All]
    • FIX: compilation warnings #361
  • [CGALPlugin]
  • [image]
  • [Registration]
    • Remove deprecated scene #331
  • [SofaPython]
    • General cleaning #304
    • Fix warnings #361
    • print cleaning + SofaPython quaternion dot product #404
  • [runSofa]
    • Clean : remove non-ASCII chars in string #327

v17.06

Full log

New features

For users

  • [SceneCreator]
    • new methods to add basic 3D object: Cube, Cylinder, Sphere and Plane. In rigid or deformable.
  • [GeneralTopology]
    • SphereGridTopology component to create sphere grids, similar to CylinderGridTopology.
  • Adds a new orientedBox dataField in BoxROI so that we can use it to either defined AABoxes or OrientedBox
  • Minor improvement on the way warning/error message are presented to the users in runSofa. A single panel is now used instead of of two, it is always displayed, the Panel name also contains the number of message eg: "Messages(5)"
  • The Graph view is now displaying the type of message they contains.
  • [runSofa]
    • Autoload plugins, described in the user-custom file 'plugin_list.conf' if present; else 'plugin_list.conf.default' containing all compiled plugins and generated automatically by CMake.

For developpers

  • Add a Logger component that stores the history of messages into each sofa component.
  • Implements new methods to write on-liner's conditional message: msg_info_when(level<3) << "This is a conditional info message"
  • Implement an implicit version of each of the msg_* API allowing to write msg_info() << "Hello" in place for msg_info(this) << Hello"
  • CImgPlugin : creation of a dedicated plugin for image loading based on CImg #185
  • Remove deprecated miniBoost dependency #273

Improvements

Modules

  • [All]
    • update containers to support c++x11 features #113
    • speed up spheres rendering + code cleaning #170
    • updates externs/gtest to a fresh checkout #213
    • auto-init/cleanup libraries #168
    • Improve and clean msg_api and logging of message (#190, #255, #275). See documentation for more information.
    • Add CMake option to limit cores used to build specific targets #254
    • Fix rgbacolor parsing #305
    • CMake: installing gtest headers for separate plugin builds #395
  • [SofaKernel]
    • Update the RichConsoleStyleMessageFormatter #126
    • creation of a defaulttype::RGBAColor #119
    • add a new method in BaseObjectDescription #161
    • adding listener mechanism to SceneLoader #205
    • common usage for DiagonalMass and tests #230
    • add tests for DataFileName #250
    • add tests for DefaultAnimationLoop #258
    • add tests for LocalMinDistance #258
    • add a way to convert message type to string in Message.cpp #213
    • MeshSTL.cpp replace a std:cerr by a msg_error so that FIX the corresponding failing test #213
    • adding listener mechanism to SceneLoader #204
    • Grid Topologies cleanup + new SphereGrid #164
    • Add CMake option SOFA_WITH_EXPERIMENTAL_FEATURES (default OFF) to enable MechanicalObject::buildIdentityBlocksInJacobian #276
  • [SofaGraphComponents]
    • add tests for RequiredPlugin #258
  • [SofaHelper]
    • GLSL: load shader source code from a standard string #158
  • [SofaBaseTopology]
    • GridTopology : implement "flat" grids in 1 or 2 dimension by using setting grid resolution to "1" in the corresponding axis, and associated examples #270
    • add tests for RegularGridTopology #270
  • [SofaEngine]
    • BREAKING: Add oriented box feature to BoxROI #108
  • [SofaConstraint]
    • add instantiation of constraint corrections with Vec2f #157
  • [SofaOpenglVisual]
    • add tests for ClipPlane #258
  • [SofaVolumetricData]
    • add tests for DistanceGrid #258
    • add tests for Light #258
  • [SofaBoundaryCondition]
    • add tests for ConstantForceField, some of them are OpenIssue demonstrating existing problem, as crashing sofa when using negative or too large values in indices #258
  • [CI]
    • improvement of all test scripts

Plugins / Projects

  • [GUI]
    • mouse events are now transmitted to the scene with QtGLViewer #132
  • [SceneCreator]
    • Cosmetic changes and remove un-needed include #169
  • [SofaPython]
    • Macros to bind "sequence" types #165
    • ModuleReload #214
    • light module reload #202
    • change the way createObject() handle its arguments to simplify scene writing + batch of tests #286
  • [SofaTest]
    • add Backtrace::autodump to all tests to ease debugging #191
    • add automatic tests for updateForceMask #209
    • add tests on PluginManager #240
    • TestMessageHandler : new and robust implementation to connect msg_* message to test failure #213
    • update to use the new TestMessageHandler where msg_error generates test failures #213
    • add tests for TestMessageHandler #213
  • [SofaCUDA]
    • FIX NVCC flags for debug build on Windows #300

Bug Fixes

Modules

  • Warnings have been fixed #229
  • [All]
    • check that SofaPython is found before lauching the cmake sofa_set_python_directory command #137
    • use the cmake install DIRECTORY instead of FILES to preserve the files hierarchy when installing #138
    • fixing issue related to parsing attributes with atof/atoi #161
    • unify color datafield #206
    • Fix CMakeLists bug on Sofa.ini and installedSofa.ini creation #291
    • Fix a lot of failing tests (#271, #279)
    • Fix compilation with SOFA_FLOATING_POINT_TYPE as float #262
    • CMake: Fix and clean boost, when using Sofa as an external lib #421
  • [SofaKernel]
    • Fix the Filemonitor_test random failure on MacOs #143
    • implement a numerical integration for triangle #249
    • add brace initializer to helper::vector class #252
    • Activates thread-safetiness on MessageDispatcher. #257
    • Fix getRelativePath() in DataFileName #250
    • FileRepository::getRelativePath() lowering the case on WIN32 is now a deprecated behavior #264
    • Fix FileRepository should not be optional #122
    • FileMonitor: fix the recurrent problem with file 'SofaKernel/framework/framework_test/resources/existing.txt' pointed in Issue #146 #258
    • Fix wrong inline in exported functions #449
  • [SofaFramework]
    • fix the integration scheme for Quaternion #172 and fix values with which the quaternion is being compared after creation from euler angles
  • [SofaHelper]
    • VisualToolGL: fix single primitive calls #293
    • ImagePNG: Fix library linking in debug configuration under MSVS #298
  • [SofaBaseMechanics]
    • MechanicalObject: cleaning: symbols & include #249
  • [SofaPhysicsAPI]
    • fix compilation of the project #167
  • [SofaUserInteraction]
    • MouseInteractor: FIX the mouse picking on Mechanical Object #282

Plugins / Projects

  • [image]
    • Fixes #135 : Check that SofaPython is found before including python directory #137
    • Fixes #136 : Use the cmake install DIRECTORY instead of FILES #138
  • [LeapMotion]
    • FIX compilation for LeapMotion plugin due to moved files #296
  • [runSofa]
    • Fix minor consistency issues related to the readOnly flag #115
  • [SofaTest]
    • repair the minor API breaks introduced by PR #213 #269

Scenes

  • Components/engine/GenerateGrid.scn was fixed #303

Cleanings

Modules

  • [All]

    • clean the consistency issues related to the readOnly flag #115
    • Clean licenses #139

  • [SofaKernel]

    • clean DefaultPipeline.cpp/h (API BREAKING)
    • clean the attributes names in BoxROI (API BREAKING)
    • TetrahedronFEMForceField clean code #270
    • GridTopology : clean the code & factor the constructor #270
    • RegularGridTopology : clean the constructor's code & remove NDEBUG code #270
    • MechanicalObject : removal of code specific to the grid #270

  • [SofaVolumetricData]

    • Light: clean and strenghening the interface #258
    • DistanceGrid

  • [SofaBoundaryCondition]

    • ConstantForceField: clean to follow sofa guideline & fix the "visible dependencies" #258
    • ConstantForceField: replace the "points" attribute by "indices" with backward compatibility & deprecation message #258

Plugins / Projects

  • [SceneCreator]
    • clean with cosmetic changes and removed un-needed includes
  • [SofaPython]
    • cleaning data binding #166

Moved files

v16.12

Last commit: on Jan 08, 2017
Full log

Environment

  • C++11 is now mandatory. This implies some changes in building tools.
    • Generator: CMake 3.1 or higher.
    • Compiler: GCC 4.8 or higher, Clang 3.4 or higher, Microsoft Visual C++ 2013 or higher.

New features for users

  • new Geomagic plugin: supporting latest versions of force feedback interfaces from Geomagic
  • add ForceMaskOff, a component to locally (in a branch of the scene graph) cancel the force mask
  • live-coding for python
  • live-coding for GLSL
  • new component MakeAlias
  • new component MakeDataAlias
  • improved error message & console rendering

New features for developpers

  • Preliminary Markdown support in the msg_* API. You can now write much better formatting & alignement as well as adding URL to documentations related to the error.
  • class RichStyleConsoleFormatter which interprete the markdowns in the message and format this to a resizable console with nice alignement.
  • class CountingMessageHandler (count the number of message for each message type)
  • class RoutingMessageHandler (to implement context specific routing of the messages to different handler)
  • class ExpectMessage and MessageAsATestFailure can be used to check that a component did or didn't send a message and generate a test failure.
  • FileMonitor is now implemented on MacOS & Windows (for live-coding features, for example)
  • RequiredPlugin: modified API to take a list of plugins to load
  • Implements the move semantics on sofa::helper::vector

Improvements

  • 372 new tests: DAGNode, MeshObj, DiagonalMass, BoxROI, ComplementaryROI, DifferenceEngine, BilateralInteractionConstraint, Quaternion, ImagePNG, etc.
  • 184/480 components have an associated example
  • [SofaKernel]
    • replace raw pointers with a smart ones
    • add a ComponentState attribute to BaseObject
    • BaseData::typeName is now public: useful to debug
    • implement DataTrackerEngine, a kind of DataEngine but that is not a BaseObject
    • fix SVectorstd::string. The string serialization changed
  • [SofaRigid]
    • in case jetJs is called several times per step
  • [SofaGeneralLoader]
    • MeshVTKLoader can now read FIELD data of legacy file. Lookup tables are ignored.
  • [SofaPython]
    • binding AssembledSystem as a new class in python
    • binding VisualModel::exportOBJ
    • binding for DataFileNameVector
    • add Compliant.getImplicitAssembledSystem(node)
    • SofaNumpy: bind/share a c++ 1d array as a numpy array
    • script.Controller : handle optional arguments before createGraph
  • [image]
    • raw import: add commented basic size verifications (could be performed in debug)
  • [Flexible]
    • add support for shapefunction viewer
    • new feature of strain smoothing
    • improve readme file
  • [Compliant]
    • simulation unit: convert gravity, dt
    • MaskMapping: every input are now mapped
    • add LinearDiagonalCompliance component
    • fix use of VLA in python mappings
    • improve readme file

Bug Fixes

  • fix ConstantForceField::updateForceMask()
  • fix ObjExporter memory leak
  • [SofaOpenGLVisual] OglTexture: fix possible memory leaks
  • [Compliant]
    • clean python

Cleanings

  • clean the compilation when SOFA_NO_OPENGL flag is activated
  • clean the config.h (SOFAGUI_HAVE_QWT)
  • remove boost library links (includes still required). boost chrono is not required anymore.
  • remove unused POINT_DATA_VECTOR_ACCESS macro
  • make miniflowVR build optional (default OFF)
  • [SofaKernel]
    • remove last direct opengl calls in modules
    • add deprecation message on MechanicalObject attributes
  • [SofaBaseVisual] clean BaseCamera: remove direct opengl calls
  • [SofaHaptics] boost-thread is not used any more, clean cmake
  • [SofaGeneralLoader] STLLoader: fixing binary loading in debug and cleaning examples
  • [SofaPython]
    • remove ScriptEnvironment i.e. automatic initialization of Node
    • Node::isInitialized(), not used anymore
  • [Flexible]
    • clean relativeStrainMapping

Moved files

  • move CImg from extlibs to image plugin extlibs

Documentation

  • Add the contribution and guidelines : CONTRIBUTING.md and GUIDELINES.md
  • Add the configuration required (ex: C++, compiler versions)
  • Add a page to use SOFA in Matlab
  • Improve Logger documentation
  • Add a page to use SOFA in Matlab

v16.08

Last commit: on Jul 28, 2016
Full log

New features

  • SOFA on GitHub - https://github.com/sofa-framework/sofa
  • creation of a RigidScale plugin: implementing mappings, especially allowing to get the DOF with Rigid+Scale type, while reusing affine DOF (Rigid+Scale+Shear) already implemented in Flexible
  • creation of a LeapMotion plugin: allowing to integrate a Leap in your SOFA simulation
  • add the DrawTool: DrawTool is an interface, describing an API to display primitives on screen. For now, only the OpenGL (fixed-pipeline version) implementation has been made.
  • add a Logger
  • add the diffusion effect in SOFA (heat transfer)
  • SOFA_USE_MASK compilation variable to activate or de-activate the masks in SOFA
  • DataTracker: simple and elegant way to track Data in Engine
  • extlibs: update cimg to version 1.7.3
  • Add guidelines for contributions in CONTRIBUTING.md

Moved files

  • Kernel modules of SOFA (SofaFramework, SofaBase, SofaCommon and SofaSimulation) have been moved to one common module SofaKernel, located at sofa_root/SofaKernel. SofaKernel is a pure LGPL module.

  • code in sofa_root/modules/sofa/simulation/ has been splitted into three modules of SofaKernel: SofaSimulationCommon, SofaSimulationTree, SofaSimulationGraph

  • MOVE the SofaPardiso module as a plugin

  • Move OglTetrahedralModel into a new plugin called VolumetricRendering

  • Minor moves

    • Move ColorMap code to helper and let (Ogl)ColorMap from SofaOpenGLVisual doing OpenGL stuff
    • Move TorsionForceField and ComplementaryROI into SOFA (those two components where in a deprecated repository sofa_root/modules/sofa/components/)

  • [Compliant]

    • moving propagate_constraint_force_visitor in a helper file and minor cleaning of CompliantImplicitSolver

Improvements

  • test examples are now running (on Jenkins for the Continuous Integration)

  • Add unit test for quaternions

  • Improving default mouse manipulation while picking a dof

  • MouseWheel events now propagated

  • Minor improvements

    • runSofa: force loading the SofaPython plugin if existing
    • runSofa: adding clang-style formatting (option '-z clang')
    • MechanicalObject: adding more visualisation colors for Rigids
    • SofaPluginManager: Clear description and components when removing last plugin
    • CMake: removing "-Wno-deprecated-register" compiler option that is only known by a few compilers
    • Collision: add function setConstraintId in BaseConstraintSet
    • SPtr: up to 10 parameters in constructor
    • Add function in EigenBaseSparseMatrix in order to use eigen matrices with async solvers
    • Add CUSPARSESolver in SofaCudaSolversPlugin, this solver uses cusparse library to solve a sparse triangular system on the GPU
    • MeshBoundaryROI: allows specifying an input subset
    • ColorMap: with face culling enabled
    • ColorMap: adding a scale for the legend range values
    • ImageViewer: adding new boolean data field displaying meshes directly on the slices
    • ProjectionToPlaneMultiMapping: adding a projection factor to perform tricky stuff such as planar symmetry
    • ProjectionToTargetPlaneMapping: adding a factor to perform planar symmetry for example
    • DataDisplay: can now be displayed in wireframe
    • DataDisplay: display used topology
    • DataDisplay: fix and improving shading a bit
    • SofaEngine: add selectLabelROI engine
    • SofaEngine: add SelectConnectedLabelsROI
    • SofaBoundaryCondition: it is now possible to hide fixedconstraint (default to shown as before)
    • Mat.h: adding tensor product between vectors
    • ForceField: adding const getMState()
    • VolumetricRendering: Initialize tetra/hexa Data<> (to be able to link them as data in scenes)
    • SofaBaseVisual: Add modelview and projection matrices as data output
    • FrameBufferObject: check (and use) the default framebuffer for the current display window
    • SofaOpenGLVisual: add link to a potential external shader for VisualManagerSecondaryPass
    • Add OglTexturePointer
    • adding SquareDistanceMapping to compute the square distance between 2 points.
    • add OrderIndependentTransparency Manager (using two passes instead of three)
    • add OglOITShader to customize the shading of transparent surfaces
    • ProjectionToTargetLineMapping and ProjectionToTargetPlaneMapping with precomputed constant Jacobians and using last origin and direction/normal for extra points
    • Adding a timer embedding all the animation loop step but would need further doc.
    • display of indices has been improved
    • Add an example using cloth springs: examples/Components/forcefield/ClothBendingForceField.py
    • Improving a few examples by making the embedding nodes as non pickable (tag 'NoPicking')
    • Add BaseNode::getRootPath
    • Improving performances: - Message::class is now an enum
    • Updated draw method of PointSetGeometryAlgorithms, QuadSetGeometryAlgorithms, TetrahedronSetGeometryAlgorithms, TriangleSetGeometryAlgorithms
    • Add Blender-like orientation helper in the bottom-left part of the screen while drawing bbox (QtGlViewer)
    • Add Blender-like orientation helper in the bottom-left part of the screen while drawing bbox (QtViewer)
    • add of GUIEvent into the STLExporter
    • Make the code compatible with ClipPlane (using ClipVertex in shaders, which is deprecated for GLSL > 1.4)
    • Optimize the callto C-PYTHON side when the functions are not implemented in the python side
    • Add color attribute support (and default color if not present in the node)
    • Reactivate color map in TetraFEM, as it does not depend on SofaOpenGLVisual anymore
    • indices data field for UniformMass
    • analyze matrix only if number of non-zeroes has changed and no iterative refinement
    • update the applyConstraint methods according to the actual API
    • Adding ProjectionTo{Plane|Line}MultiMapping where the plane (origin,normal) and the line (origin,direction) are dofs
    • add MeshBoundaryROI with an example

  • [Tests]

    • for (multi)Mapping test, check the size of the mapping output is correct
    • adding TestMessageHandler that raises a gtest failure each time an error message is processed
    • test for node removal
    • test for removal of a node containing an UncoupledConstraintCorrection (for now the test fails because there is a problem with the removal of that component)
    • add of Multi2Mapping_test
    • add DistanceMapping_test

  • [SofaPython]

    • logger: cleaning emitter
    • sml.Mesh: adding load function
    • sml: python set for tags is created by objects themselves
    • sml: add tag to JointGeneric
    • sml: add the printLog flag
    • sml: setup units in BaseScene for all sml Scene class
    • sml: mesh has a clear id
    • sml:insertVisual: bug fix for solid with multiple meshes (just impacting the Display scene)
    • sml: handy constructor for Dof creation
    • sml: like can be defined in
    • sml: add a utility function: look into the valueByTag dictionary for a tag contained in tags
    • sml: adding a warning if a vertex group is empty
    • sml: can have offsets under solids
    • sml: remove deprecated setTagFromTag() method
    • API: add subsetFromDeformables function
    • binding Node::isInitialized
    • binding loadPythonSceneWithArguments
    • adding a binding to get the pointer of a Data (with its dimensions and type)
    • adding binding of BaseMapping::getJs (as dense matrices for now)
    • adding python functions to convert a Data in a numpy array with shared memory
    • adding a visitor to set all mstates as non pickable (such as picking will only be performed with collision models)
    • add tags to mesh groups
    • add a groupsByTag dict to easily iterate over groups knowing a tag
    • add of SceneDataIO to save and load the current state of a simulation
    • add of the method getDataFields
    • adding automatically tested examples
    • add tags to MeshAttributes
    • add a helper PythonScriptFunction_call and PythonScriptFunction_callNoResult to call a python controller function from c++ code
    • PythonScriptHelper -> PythonScriptControllerHelper: PythonScriptHelper: add convertion for float and std::string
    • Add the timingEnabled attribute to the PythonScriptController to control if the script is gather timing statistics
    • adding python module to load .obj files
    • adding BaseContext_getObject_noWarning that returns None w/o warning if the object is not found
    • improving a bit the conversion from a cpp Base* to a PyObject* when the cpp Base* type is (even partially) known.
    • adding a test to show how to bind a component outside of SofaPython
    • Factory: conversion shortcuts for known types
    • PythonScriptController: if the filename is let empty, the controller is supposed to be in an already loaded file, to avoid to read the same file several times
    • adding "loadPlugin" function to the Sofa python module
    • Add a getObjects() method to python BaseContext interface. Allow selection of objects based on type and name.
    • object and type names are now both optional when calling BaseContext_getObjects()
    • search direction can now optionally be passed to BaseContext_getObjects()
    • at object creation failure, print additional error messages from BaseObjectDescription
    • adding special Data types in the PythonFactory, so more specific cases can be added outside of the plugin SofaPython.
    • adding Node::addObject_noWarning not to print a warning when adding an object to an already initialized node
    • add of a method which compute quaternion from a line define by a director vector
    • add of few new features to save and load the current state of simulation

  • [Flexible]

    • adding FlexibleCorotationalMeshFEMForceField (meta-forcefield). Not optimized but working
    • add of RigidScale mapping in addition to their tests and examples
    • HexaFEM comparison: each method has its own solver and uses the same decomposition so the only difference came from the deformation tensor used to find the rotation.
    • Flexible: WIP adding a meta-forcefield to compute regular corotational FEM. The idea is to use Flexible's components internally without adding extra computation neither extra memory
    • API: add strain offseting option
    • API: strainMappings as data members
    • API: use branching images for mass computation
    • API: make AffineMass, ShapeFunction, Behavior work in more cases
    • API: make Behavior work in simple cases with no label image
    • materials: removed checking for changed parameters at each step.
    • add example showing how to better handle partially filled elements using fine volumes
    • optimizing FlexibleCorotationalMeshFEMForceField by preassembling constant sub-graph
    • refactoring of MassFromDensity
    • adding a warning when creating a UniformMass on Affine/Quadratic frames.
    • add FEMDof class to python API
    • DeformationMapping: print a warning if a child particle has no parent
    • adding HEML implementation of St Venant-Kirchhoff materials (for tetrahedra).
    • if correct weights are given in mapping as input data, use it (even if a shapefunction is found)
    • use sout for logging
    • compute tangents for VisualModel loaded using loadVisual python function
    • transformEngine for Affine frames

  • [Compliant]

    • sml: export of meshes
    • sml: the solids tags to be simulated as rigids are gathered in a set()
    • sml: geometricStiffness option
    • sml: using logger
    • implementing compliance unassembled API
    • in the python API, joints can be created in compliance or not
    • API: write a addSpring() in GenericRigidJoint, reuse it in children classes where possible
    • API: simplify usage of jointCompliance specification by tag
    • API: relative offset position is given to the AssembledRigidRigidMapping, and then computed at init into the MO
    • API: modifying the API to move an Offset
    • API: adding Offset::moveOffset to apply a rigid transformation to an offset (in its local frame)
    • API: new parameter to add non-mechanical Offsets and MappedPoints
    • API: collision mesh and visual model can be added to a Rigid Offset
    • adding an automatic execution of a scene based on a sml description
    • Constraint: adding a typeid for faster Constraint type comparisons
    • adding short name to create a ConstantCompliantPseudoStaticSolver
    • using tag on joints in a generic way, set their compliance / isCompliance value
    • added machinery to map data to numpy arrays, see example/numpy_data.py
    • added easy pure python mappings, see examples/numpy_mapping.py
    • added pure python forcefields, see examples/numpy_forcefield.py
    • AssembledRigidRigidMapping autoresize
    • geometric stiffness in python mappings
    • insertMergeRigid is coherent with solid tags usage
    • CompliantPseudoStaticSolver: avoiding an unnecessary propagation when the stopping criterion is the nb of iterations.
    • visualization in DifferenceFromTargetMapping
    • Frame.py: adding a function to force quaternion normalization (to avoid numerical drift)
    • added SimpleAnimationLoop
    • adding RigidRestJointMapping to compute a joint between a rigid body's current position and its rest position.
    • large compliances are considered as null stiffnesses
    • Offset default to isMechanical=True
    • python quaternion log
    • added nlnscg acceleration
    • pure python constraints
    • .inl for python mappings
    • adding Addition[Multi]Mapping
    • implementing AssembledMultiMapping::applyDJT
    • adding DotProduct[Multi]Mapping (with tests)
    • adding NormalizationMapping to map a 3d vector to its normalization
    • adding ConstantAssembled[Multi]Mapping
    • adding SafeDistanceMapping: a distance mapping that becomes a difference mapping for too small distances.
    • adding SafeDistanceFromTargetMapping
    • using the new SofaPython API
    • SafeDistanceFromTargetMapping can now be "safe" by giving the edge directions when they are known
    • adding the SofaCompliant python module (first module created outside of SofaPython!)
    • adding DotProductFromTargetMapping (with test)
    • adding RigidJointFromTargetMapping and RigidJointFromWorldFrameMapping
    • add of complementary API to create deformable articulated systems
    • adding NegativeUnilateralConstraint to guarantee negativeness
    • adding PenaltyForceField and using it in penalty contact response
    • add of two file from the SohusimDev plugin

  • [image]

    • API: Sampler.addMechanicalObject() more versatile
    • API: refactor python API
    • API: add addClosingVisual()
    • add function in python API to retrieve perspective property
    • MeshToImageEngine: move getValue out of for loops
    • add a python ImagePlaneController
    • Data<Image> are now specifically bound in python
    • remove pthread and X11 dependencies
    • add metaimage tags that may be used to define orientation
    • add python function to retrieve image type
    • simpler imagePlane python controller
    • add a createTransferFunction method
    • improved cutplane texture resolution
    • half perspective, half orthographic image transforms
    • add imageCoordValuesFromPositions engine

Bug Fixes

  • [PluginManager] crashed when a plugin was removed

  • [SofaCUDA] fix the compilation using SofaCUDA on Windows

  • unstable behavior of masks - USE-MASK variable added

  • fix DAGNode traversal when a visitor is run from a node with a not up-to-date descendancy

  • fix flaws in glText (memory leak and an other bug)

  • EigenBaseSparseMatrix: fix parallel matrix-vector product

  • XML export

  • Minor fix

    • Sofa helper: leak when drawing 3d text
    • compilation with SofaDumpVisitor flag enabled
    • compilation of BezierTriangleSetGeometryAlgorithms (color changed from Vec3f to Vec4f)
    • runSofa: viewport aspect issue and loss of interaction in QtGLViewer
    • BoxROI: visual bounding box
    • SofaMiscForceField on Windows
    • VisualVisitor traversal order
    • SphereROI: indices out when multiple spheres
    • bug in RestShapeSpringsForceField
    • Remove VariationalSymplecticSolver.h from the package in SofaCommon (to fix history)
    • some static analysis warnings and errors (including memory leaks)
    • MeshROI: remove unnecessary sqrt
    • SphereROI: set centers' size to radii if only one radius is provided
    • ARTrack plugin compilation
    • bug in MeshNewProximityIntersection involving false positive detection with triangles containing an angle > 90°
    • path to images for html description pop up window
    • OglModel hasTexture
    • DataDisplay: normal computation
    • DataDisplay: crash when the component was dynamically added to a scene
    • visual bug with OglModel when putOnlyTexCoords is enabled with no texture
    • Order Independent Transparency for old graphics card
    • sofa::gui::glut applying changes in BaseCamera
    • computation of the bounding box in PlaneForceField
    • SofaHelper: Fix bug with FBO (causing some weird things when using textures)
    • corrected the visualization of heterogeneous tetrahedra
    • SofaOpenGLVisual: Fix Spotlight source drawing + add some log for ShaderElement
    • OmniDriverEmu plugin and examples
    • scene test: ICPRegistration_ShapeMatching.scn is ignored
    • Vec: 'normalized' function constness
    • SpotLight: direction normalization
    • ProjectionTo{Plane,Line}MultiMapping Jacobian insertion order
    • SofaGeneralRigid: bug in ArticulatedSystemMapping
    • SofaEngine: BoxROI instantiation
    • SofaBaseCollision: Fix computeBBox in SPhereModel
    • bug in MechanicalPickParticlesWithTagsVisitor input tags were not respected
    • SofaOpenGLVisual: fix light's modelview matrix computation (lookat data was not checked)
    • StateMask method clean needs to resize m_size to 0

  • [Test-CI]

    • fix crash UncoupledConstraintCorrection_test
    • fix SofaComponentBase_test on windows
    • fix Mapping and MultiMapping tests
    • fix MultiMapping::applyDJT test
    • fix {Difference,Addition}Mapping when a pair is composed of the same index.
    • fix tested scenes selection
    • removed OptiTrackNatNet from "options" configurations
    • ignore some OptiTrackNatNet scenes testing

  • [SofaPython]

    • fix GridTopology type on the python side
    • fix OBJ loader
    • fix loading a scene from a .py in a Node independently from the awful Simulation singleton.
    • fix SofaPython.Tools.localPath in some situations
    • fix BaseContext_getObjects so it can select objects from a base class name (and adding an example)
    • quaternion: fix singularity in from_line function

  • [Flexible]

    • fix case sensitive issues
    • API: fix a bug with colors when reloading a scene
    • fix the bulk factor in NeoHookean material
    • fix NeoHookean traction test
    • testing detachFromGraph
    • BaseDeformationMapping: remove debug message, fix usage of sout (no need for testing f_printLog)
    • fix test compilation w/o image plugin
    • fix loadVisual
    • fix bug in topologygausspointsampler (computation of volume integrals for irregular hexa)

  • [Compliant]

    • CompliantImplicitSolver: fix Lagrange multipliers clear when reseting the simulation
    • auto-fix init errors in RigidMass
    • Frame.py: adding tolist() conversion
    • fix Jacobian reserved size
    • fix contacts and associated test

  • [image]

    • python tools: fix bug in mhd parsing
    • MeshToImage: fix bresenham, be sure dmax>=1
    • fix resampling of projection images, and marching cubes default parameter
    • fix bug in mhd file loader
    • fix rasterization when using vertex colors

Cleanings

  • warnings were removed

  • dead branches were removed

  • the ‘using’ directives were removed in header files

  • the repository sofa_root/modules/sofa/components has been cleaned (deprecated components removed)

  • clean many SOFA examples

  • removing "using helper::vector" from VecTypes.h

  • SofaQtGui: Remove qt3 remnants in ui files

  • Minor clean

    • clean SofaBaseCollision of OpenGL dependency
    • cleaning Material::setColor
    • Base: write sout as info (rather than warnings)
    • clean and fix RestShapeSpringsForceField draw functions
    • Remove useless tests, optimize and fix potential bugs
    • cleanup, precompute barycenters for tetra and hexa
    • SofaBaseVisual: clean up and make consistent BaseCamera's code: clean QtViewer projection (remove OpenGL functions)
    • SofaBaseVisual: clean and fix BaseCamera Z clipping
    • SofaOpenGLVisual: cleanup Lights (remove Glu calls and set matrices as data) + Fix typo in Camera
    • quaternion to euler: not need for the hack since atan2 is used

  • [SofaPython]

    • clean examples
    • clean the hard-binding example
    • clean noPicking visitor

  • [Flexible]

    • remove unecessary data for Gauss points visualization
    • some clean regarding openmp parallelisation
    • clean metaFF
    • remove unecessary apply in reinit
    • clean FlexibleCorotationalMeshFEMForceField

  • [Compliant]

    • clean RigidJoint{Multi}Mapping

v15.12

Full log

v15.09

Full log