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CITATION
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To cite the Dockstore project as a whole please refer to
O'Connor BD, Yuen D, Chung V et al. The Dockstore: enabling modular, community-focused sharing of Docker-based genomics tools and workflows [version 1; peer review: 2 approved]. F1000Research 2017, 6:52 (https://doi.org/10.12688/f1000research.10137.1)
To cite the Dockstore source code, please refer to:
https://doi.org/10.5281/zenodo.4289328
{
"description": "Highlighted new features include\n<ul>\n<li>GitHub app support for filters to allow for more control over which tags and branches are automatically reported to Dockstore, more details <a href=\"https://docs.dockstore.org/en/develop/getting-started/github-apps/github-apps.html?highlight=filters\">here</a></li>\n<li>can select a specific version of a workflow or tool when adding then to a collection (\"I vouch for specifically version X of workflow Y\")</li>\n<li>cwltool updates from 1.0.20190621234233 to 3.0.20200807132242</li>\n<li>GitHub apps patches for more reliable processing of automatic updates</li>\n<li>performance improvements for large repositories with lots of branches and tags</li>\n<li>performance improvments for GA4GH TRS implementation</li>\n<li>a start to a more consistent visual experience for the site</li>\n<li>Behind the scenes<ul>\n<li>a large number of deployment and architectural changes to facilitate better security and regulatory compliance</li>\n<li>updates to elastic search and angular</li>\n</ul>\n</li>\n<li>a huge host of bugfixes for everything from WDL parsing, UI display issues, editing of hosted workflows, and command-line interface fixes \nSee a full list of our changes on <a href=\"https://github.com/dockstore/dockstore/milestone/37\">GitHub</a></li>\n</ul>\nBreaking changes\nMajor\n<ul>\n<li>none known (or intended anyway)</li>\n</ul>\nMinor\n<ul>\n<li>none</li>\n</ul>",
"license": "",
"creator": [
{
"affiliation": "@OICR_news",
"@type": "Person",
"name": "Denis Yuen"
},
{
"@type": "Person",
"name": "Andrew Duncan"
},
{
"@type": "Person",
"name": "Victor Liu"
},
{
"affiliation": "OICR",
"@type": "Person",
"name": "Gary Luu"
},
{
"affiliation": "UCSC Genomics Institute & Nimbus Informatics, LLC",
"@type": "Person",
"name": "Brian O'Connor"
},
{
"@type": "Person",
"name": "Charles Overbeck"
},
{
"@type": "Person",
"name": "NatalieEO"
},
{
"affiliation": "UCSC Genomics Institute",
"@type": "Person",
"name": "Walter Shands"
},
{
"affiliation": "Ontario Institute for Cancer Research",
"@type": "Person",
"name": "Gregory F J Hogue"
},
{
"@type": "Person",
"name": "Emily Soth"
},
{
"@type": "Person",
"name": "Louise Cabansay"
},
{
"@type": "Person",
"name": "oicr-vchung"
},
{
"@type": "Person",
"name": "Andy Chen"
},
{
"@type": "Person",
"name": "David Steinberg"
},
{
"affiliation": "@CuriiHQ @arvados",
"@type": "Person",
"name": "Peter Amstutz"
},
{
"@type": "Person",
"name": "Kitty Cao"
},
{
"@type": "Person",
"name": "Kathy Tran"
},
{
"@type": "Person",
"name": "Ryan Bautista"
},
{
"@type": "Person",
"name": "nrzhao4"
},
{
"@type": "Person",
"name": "Noah Warren"
},
{
"affiliation": "UCSC Genomics Institute",
"@type": "Person",
"name": "Chaz Reid"
},
{
"@type": "Person",
"name": "Abraham"
},
{
"affiliation": "University of California, Davis",
"@type": "Person",
"name": "C. Titus Brown"
},
{
"affiliation": "Codacy",
"@type": "Person",
"name": "Codacy Badger"
},
{
"@type": "Person",
"name": "dockstore-admin"
},
{
"affiliation": "@Gradle",
"@type": "Person",
"name": "Jonathan Leitschuh"
},
{
"@type": "Person",
"name": "Richard-Hansen"
},
{
"affiliation": "@Snyk",
"@type": "Person",
"name": "Snyk bot"
},
{
"affiliation": "Gitter",
"@type": "Person",
"name": "The Gitter Badger"
}
],
"url": "https://zenodo.org/record/4289328",
"codeRepository": "https://github.com/dockstore/dockstore/tree/1.10.0",
"datePublished": "2020-11-24",
"version": "1.10.0",
"@context": "https://schema.org/",
"identifier": "https://doi.org/10.5281/zenodo.4289328",
"@id": "https://doi.org/10.5281/zenodo.4289328",
"@type": "SoftwareSourceCode",
"name": "dockstore/dockstore: 1.10.0"
}