Problem with delly 1.3.2 via conda

[IanCodes]

When I try to install delly 1.3.2 via conda I get an error message.

Install:
conda install bioconda::delly=1.3.2

Error:
delly: error while loading shared libraries: libboost_iostreams.so.1.85.0: cannot open shared object file: No such file or directory

If I install 1.3.1 it works OK.

Are there any major differences using 1.3.1 rather than 1.3.2?

Thank you.

[tobiasrausch]

I bumped the delly version, which triggers a new bioconda built. Can you please try v1.3.3 ?

[IanCodes]

It still does not work for me:
delly: error while loading shared libraries: libboost_iostreams.so.1.85.0: cannot open shared object file: No such file or directory

I used:
bioconda/linux-64::delly-1.3.3-h4d20210_0

[tobiasrausch]

Hmm, strange. The bioconda delly recipe specifies boost as a dependency. What happens if you explicitly also installs boost?

conda install ... delly boost-cpp

or

conda install ... delly boost

[tobiasrausch]

I also always release static binaries. These are maybe the easiest option:

wget https://github.com/dellytools/delly/releases/download/v1.3.3/delly_v1.3.3_linux_x86_64bit
chmod a+x delly_v1.3.3_linux_x86_64bit
./delly_v1.3.3_linux_x86_64bit

[IanCodes]

Thank you, I did start using the static binary once I realised it was there.

I tried additionally adding boost-cpp (conda report it already present), and boost (installed v1.78.0 along with other packages).
I got the same error.

Is there a changelog for the different versions of delly?