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.gitignore
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.*
_*
*.out
!.gitignore
!.gitattributes
!.gitmodules
!.travis.yml
!.flake8_nb
!docs/.nojekyll
docs/*.ipynb
!docs/**/_*
results/*
!results/gene_sequence
results/gene_sequence/*
!results/gene_sequence/*.fasta
!results/variants
results/variants/*
!results/variants/codon_variants.csv
!results/barcode_runs
results/barcode_runs/*
!results/barcode_runs/processed_barcode_runs.csv
!results/variant_counts
results/variant_counts/*
!results/variant_counts/*.csv
!results/prob_escape
results/prob_escape/*
!results/prob_escape/antibody_selections.csv
!results/site_numbering
results/site_numbering/*
!results/site_numbering/site_numbering_map.csv
!results/func_scores
results/func_scores/*
!results/func_scores/functional_selections.csv
!results/globalepistasis_fits
results/globalepistasis_fits/*
!results/globalepistasis_fits/*.csv
!results/muteffects_functional
results/muteffects_functional/*
!results/muteffects_functional/*.csv
!results/antibody_escape
results/antibody_escape/*
!results/antibody_escape/*.csv
!results/antibody_escape/*.html