From 88b9948c4977ca90ab5ceb391b2235043135480d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Fa=CC=81bio=20Madeira?= Date: Wed, 20 Mar 2024 12:09:10 +0000 Subject: [PATCH] JD-2176 bumps to 2024 --- LICENSE | 2 +- cwls-docker/clustalo.cwl | 2 +- cwls-docker/dbfetch.cwl | 2 +- cwls-docker/emboss_backtranambig.cwl | 2 +- cwls-docker/emboss_backtranseq.cwl | 2 +- cwls-docker/emboss_cpgplot.cwl | 2 +- cwls-docker/emboss_dotmatcher.cwl | 2 +- cwls-docker/emboss_dotpath.cwl | 2 +- cwls-docker/emboss_dottup.cwl | 2 +- cwls-docker/emboss_isochore.cwl | 2 +- cwls-docker/emboss_matcher.cwl | 2 +- cwls-docker/emboss_needle.cwl | 2 +- cwls-docker/emboss_newcpgreport.cwl | 2 +- cwls-docker/emboss_pepinfo.cwl | 2 +- cwls-docker/emboss_pepstats.cwl | 2 +- cwls-docker/emboss_pepwindow.cwl | 2 +- cwls-docker/emboss_polydot.cwl | 2 +- cwls-docker/emboss_seqret.cwl | 2 +- cwls-docker/emboss_sixpack.cwl | 2 +- cwls-docker/emboss_stretcher.cwl | 2 +- cwls-docker/emboss_transeq.cwl | 2 +- cwls-docker/emboss_water.cwl | 2 +- cwls-docker/fasta.cwl | 2 +- cwls-docker/fastm.cwl | 2 +- cwls-docker/genewise.cwl | 2 +- cwls-docker/hmmer3_hmmscan.cwl | 2 +- cwls-docker/hmmer3_phmmer.cwl | 2 +- cwls-docker/infernal_cmscan.cwl | 2 +- cwls-docker/iprscan5.cwl | 2 +- cwls-docker/kalign.cwl | 2 +- cwls-docker/lalign.cwl | 2 +- cwls-docker/mafft.cwl | 2 +- cwls-docker/mapmi.cwl | 2 +- cwls-docker/muscle.cwl | 2 +- cwls-docker/mview.cwl | 2 +- cwls-docker/ncbiblast.cwl | 2 +- cwls-docker/pfamscan.cwl | 2 +- cwls-docker/phobius.cwl | 2 +- cwls-docker/prank.cwl | 2 +- cwls-docker/pratt.cwl | 2 +- cwls-docker/promoterwise.cwl | 2 +- cwls-docker/psiblast.cwl | 2 +- cwls-docker/psisearch.cwl | 2 +- cwls-docker/psisearch2.cwl | 2 +- cwls-docker/radar.cwl | 2 +- cwls-docker/saps.cwl | 2 +- cwls-docker/seqcksum.cwl | 2 +- cwls-docker/simple_phylogeny.cwl | 2 +- cwls-docker/tcoffee.cwl | 2 +- cwls-docker/wise2dba.cwl | 2 +- cwls/clustalo.cwl | 2 +- cwls/dbfetch.cwl | 2 +- cwls/emboss_backtranambig.cwl | 2 +- cwls/emboss_backtranseq.cwl | 2 +- cwls/emboss_cpgplot.cwl | 2 +- cwls/emboss_dotmatcher.cwl | 2 +- cwls/emboss_dotpath.cwl | 2 +- cwls/emboss_dottup.cwl | 2 +- cwls/emboss_isochore.cwl | 2 +- cwls/emboss_matcher.cwl | 2 +- cwls/emboss_needle.cwl | 2 +- cwls/emboss_newcpgreport.cwl | 2 +- cwls/emboss_pepinfo.cwl | 2 +- cwls/emboss_pepstats.cwl | 2 +- cwls/emboss_pepwindow.cwl | 2 +- cwls/emboss_polydot.cwl | 2 +- cwls/emboss_seqret.cwl | 2 +- cwls/emboss_sixpack.cwl | 2 +- cwls/emboss_stretcher.cwl | 2 +- cwls/emboss_transeq.cwl | 2 +- cwls/emboss_water.cwl | 2 +- cwls/fasta.cwl | 2 +- cwls/fastm.cwl | 2 +- cwls/genewise.cwl | 2 +- cwls/hmmer3_hmmscan.cwl | 2 +- cwls/hmmer3_phmmer.cwl | 2 +- cwls/infernal_cmscan.cwl | 2 +- cwls/iprscan5.cwl | 2 +- cwls/kalign.cwl | 2 +- cwls/lalign.cwl | 2 +- cwls/mafft.cwl | 2 +- cwls/mapmi.cwl | 2 +- cwls/muscle.cwl | 2 +- cwls/mview.cwl | 2 +- cwls/ncbiblast.cwl | 2 +- cwls/pfamscan.cwl | 2 +- cwls/phobius.cwl | 2 +- cwls/prank.cwl | 2 +- cwls/pratt.cwl | 2 +- cwls/promoterwise.cwl | 2 +- cwls/psiblast.cwl | 2 +- cwls/psisearch.cwl | 2 +- cwls/psisearch2.cwl | 2 +- cwls/radar.cwl | 2 +- cwls/saps.cwl | 2 +- cwls/seqcksum.cwl | 2 +- cwls/simple_phylogeny.cwl | 2 +- cwls/tcoffee.cwl | 2 +- cwls/wise2dba.cwl | 2 +- workflows/clustalo.cwl | 2 +- workflows/dbfetch.cwl | 2 +- workflows/ebeye.cwl | 2 +- workflows/ebeye_API.cwl | 2 +- workflows/emboss_backtranseq.cwl | 2 +- workflows/emboss_cpgplot.cwl | 2 +- workflows/emboss_pepinfo.cwl | 2 +- workflows/emboss_transeq.cwl | 2 +- workflows/fasta.cwl | 2 +- workflows/hmmer3_hmmscan.cwl | 2 +- workflows/hmmer3_phmmer.cwl | 2 +- workflows/iprscan5.cwl | 2 +- workflows/ncbiblast.cwl | 2 +- workflows/pdbe.cwl | 2 +- workflows/pdbe_API.cwl | 2 +- workflows/phobius.cwl | 2 +- workflows/pratt.cwl | 2 +- workflows/simple_phylogeny.cwl | 2 +- workflows/workflow-blast-clustalo-phylogeny.cwl | 2 +- workflows/workflow-blast-ebeye-pdbe.cwl | 2 +- workflows/workflow-blast-phobius.cwl | 2 +- workflows/workflow-ebisearch.cwl | 2 +- workflows/workflow-fasta-pratt.cwl | 2 +- workflows/workflow-fetch-hmmscan.cwl | 2 +- workflows/workflow-fetch-phobius.cwl | 2 +- workflows/workflow-pepinfo-backtranseq-cpgplot.cwl | 2 +- workflows/workflow-phmmer-blast.cwl | 2 +- workflows/workflow-transeq-blast-clustalo.cwl | 2 +- 127 files changed, 127 insertions(+), 127 deletions(-) diff --git a/LICENSE b/LICENSE index f67cc64..8998658 100644 --- a/LICENSE +++ b/LICENSE @@ -186,7 +186,7 @@ same "printed page" as the copyright notice for easier identification within third-party archives. - Copyright 2022 The European Bioinformatics Institute + Copyright 2024 The European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/cwls-docker/clustalo.cwl b/cwls-docker/clustalo.cwl index 7449c2a..8a73541 100644 --- a/cwls-docker/clustalo.cwl +++ b/cwls-docker/clustalo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/dbfetch.cwl b/cwls-docker/dbfetch.cwl index 27d2bac..a2a0034 100755 --- a/cwls-docker/dbfetch.cwl +++ b/cwls-docker/dbfetch.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_backtranambig.cwl b/cwls-docker/emboss_backtranambig.cwl index cd68340..739193b 100644 --- a/cwls-docker/emboss_backtranambig.cwl +++ b/cwls-docker/emboss_backtranambig.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_backtranseq.cwl b/cwls-docker/emboss_backtranseq.cwl index 90e1a7b..2273415 100644 --- a/cwls-docker/emboss_backtranseq.cwl +++ b/cwls-docker/emboss_backtranseq.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_cpgplot.cwl b/cwls-docker/emboss_cpgplot.cwl index 1fad8b9..de58173 100644 --- a/cwls-docker/emboss_cpgplot.cwl +++ b/cwls-docker/emboss_cpgplot.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_dotmatcher.cwl b/cwls-docker/emboss_dotmatcher.cwl index f5e3382..f259ff8 100644 --- a/cwls-docker/emboss_dotmatcher.cwl +++ b/cwls-docker/emboss_dotmatcher.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_dotpath.cwl b/cwls-docker/emboss_dotpath.cwl index 6f07a4f..2c0f67a 100644 --- a/cwls-docker/emboss_dotpath.cwl +++ b/cwls-docker/emboss_dotpath.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_dottup.cwl b/cwls-docker/emboss_dottup.cwl index 42acac4..32451ba 100644 --- a/cwls-docker/emboss_dottup.cwl +++ b/cwls-docker/emboss_dottup.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_isochore.cwl b/cwls-docker/emboss_isochore.cwl index 9e8db2e..acf13c1 100644 --- a/cwls-docker/emboss_isochore.cwl +++ b/cwls-docker/emboss_isochore.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_matcher.cwl b/cwls-docker/emboss_matcher.cwl index 83f032e..2d8607e 100644 --- a/cwls-docker/emboss_matcher.cwl +++ b/cwls-docker/emboss_matcher.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_needle.cwl b/cwls-docker/emboss_needle.cwl index 0d11be0..07e5c1e 100644 --- a/cwls-docker/emboss_needle.cwl +++ b/cwls-docker/emboss_needle.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_newcpgreport.cwl b/cwls-docker/emboss_newcpgreport.cwl index 863cbe1..d7f2ceb 100644 --- a/cwls-docker/emboss_newcpgreport.cwl +++ b/cwls-docker/emboss_newcpgreport.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_pepinfo.cwl b/cwls-docker/emboss_pepinfo.cwl index 0eae7ef..589a5d6 100644 --- a/cwls-docker/emboss_pepinfo.cwl +++ b/cwls-docker/emboss_pepinfo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_pepstats.cwl b/cwls-docker/emboss_pepstats.cwl index 0dd7823..e3fe64e 100644 --- a/cwls-docker/emboss_pepstats.cwl +++ b/cwls-docker/emboss_pepstats.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_pepwindow.cwl b/cwls-docker/emboss_pepwindow.cwl index da90030..a2b3596 100644 --- a/cwls-docker/emboss_pepwindow.cwl +++ b/cwls-docker/emboss_pepwindow.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_polydot.cwl b/cwls-docker/emboss_polydot.cwl index ff31b57..7b0664d 100644 --- a/cwls-docker/emboss_polydot.cwl +++ b/cwls-docker/emboss_polydot.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_seqret.cwl b/cwls-docker/emboss_seqret.cwl index c978ad4..929be50 100644 --- a/cwls-docker/emboss_seqret.cwl +++ b/cwls-docker/emboss_seqret.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_sixpack.cwl b/cwls-docker/emboss_sixpack.cwl index 37b428d..ea9b35b 100644 --- a/cwls-docker/emboss_sixpack.cwl +++ b/cwls-docker/emboss_sixpack.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_stretcher.cwl b/cwls-docker/emboss_stretcher.cwl index 3a69a16..44d0c65 100644 --- a/cwls-docker/emboss_stretcher.cwl +++ b/cwls-docker/emboss_stretcher.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_transeq.cwl b/cwls-docker/emboss_transeq.cwl index cbf39f9..68dae0c 100644 --- a/cwls-docker/emboss_transeq.cwl +++ b/cwls-docker/emboss_transeq.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/emboss_water.cwl b/cwls-docker/emboss_water.cwl index b3149e6..72bcb37 100644 --- a/cwls-docker/emboss_water.cwl +++ b/cwls-docker/emboss_water.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/fasta.cwl b/cwls-docker/fasta.cwl index df1a7e8..260261d 100644 --- a/cwls-docker/fasta.cwl +++ b/cwls-docker/fasta.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/fastm.cwl b/cwls-docker/fastm.cwl index d247229..9c4b637 100644 --- a/cwls-docker/fastm.cwl +++ b/cwls-docker/fastm.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/genewise.cwl b/cwls-docker/genewise.cwl index b6ce5af..e1e4242 100644 --- a/cwls-docker/genewise.cwl +++ b/cwls-docker/genewise.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/hmmer3_hmmscan.cwl b/cwls-docker/hmmer3_hmmscan.cwl index b6fd0a3..c5d7f41 100644 --- a/cwls-docker/hmmer3_hmmscan.cwl +++ b/cwls-docker/hmmer3_hmmscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/hmmer3_phmmer.cwl b/cwls-docker/hmmer3_phmmer.cwl index d4761f6..1d20072 100644 --- a/cwls-docker/hmmer3_phmmer.cwl +++ b/cwls-docker/hmmer3_phmmer.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/infernal_cmscan.cwl b/cwls-docker/infernal_cmscan.cwl index 7d540a9..729390c 100644 --- a/cwls-docker/infernal_cmscan.cwl +++ b/cwls-docker/infernal_cmscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/iprscan5.cwl b/cwls-docker/iprscan5.cwl index 2d8e2fa..81b85ca 100644 --- a/cwls-docker/iprscan5.cwl +++ b/cwls-docker/iprscan5.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/kalign.cwl b/cwls-docker/kalign.cwl index 128224e..dc57e67 100644 --- a/cwls-docker/kalign.cwl +++ b/cwls-docker/kalign.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/lalign.cwl b/cwls-docker/lalign.cwl index 04350e6..4c90244 100644 --- a/cwls-docker/lalign.cwl +++ b/cwls-docker/lalign.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/mafft.cwl b/cwls-docker/mafft.cwl index f234406..74057ad 100644 --- a/cwls-docker/mafft.cwl +++ b/cwls-docker/mafft.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/mapmi.cwl b/cwls-docker/mapmi.cwl index 2aa5a61..1181e70 100644 --- a/cwls-docker/mapmi.cwl +++ b/cwls-docker/mapmi.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/muscle.cwl b/cwls-docker/muscle.cwl index e3123d6..0dc1523 100644 --- a/cwls-docker/muscle.cwl +++ b/cwls-docker/muscle.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/mview.cwl b/cwls-docker/mview.cwl index d4b1aad..4337431 100644 --- a/cwls-docker/mview.cwl +++ b/cwls-docker/mview.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/ncbiblast.cwl b/cwls-docker/ncbiblast.cwl index aef1ac2..e579382 100644 --- a/cwls-docker/ncbiblast.cwl +++ b/cwls-docker/ncbiblast.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/pfamscan.cwl b/cwls-docker/pfamscan.cwl index f9e48e4..33a63fb 100644 --- a/cwls-docker/pfamscan.cwl +++ b/cwls-docker/pfamscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/phobius.cwl b/cwls-docker/phobius.cwl index dad98b3..2455b7b 100644 --- a/cwls-docker/phobius.cwl +++ b/cwls-docker/phobius.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/prank.cwl b/cwls-docker/prank.cwl index be06734..16af337 100644 --- a/cwls-docker/prank.cwl +++ b/cwls-docker/prank.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/pratt.cwl b/cwls-docker/pratt.cwl index d1c36ab..47c727b 100644 --- a/cwls-docker/pratt.cwl +++ b/cwls-docker/pratt.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/promoterwise.cwl b/cwls-docker/promoterwise.cwl index 1447d27..f316dd1 100644 --- a/cwls-docker/promoterwise.cwl +++ b/cwls-docker/promoterwise.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/psiblast.cwl b/cwls-docker/psiblast.cwl index ac10557..4058ceb 100644 --- a/cwls-docker/psiblast.cwl +++ b/cwls-docker/psiblast.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/psisearch.cwl b/cwls-docker/psisearch.cwl index a0bd33b..162745f 100644 --- a/cwls-docker/psisearch.cwl +++ b/cwls-docker/psisearch.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/psisearch2.cwl b/cwls-docker/psisearch2.cwl index 0dec457..98c633a 100644 --- a/cwls-docker/psisearch2.cwl +++ b/cwls-docker/psisearch2.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/radar.cwl b/cwls-docker/radar.cwl index 645b359..320ade6 100644 --- a/cwls-docker/radar.cwl +++ b/cwls-docker/radar.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/saps.cwl b/cwls-docker/saps.cwl index 7331887..77da620 100644 --- a/cwls-docker/saps.cwl +++ b/cwls-docker/saps.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/seqcksum.cwl b/cwls-docker/seqcksum.cwl index a2251ef..a419e4a 100644 --- a/cwls-docker/seqcksum.cwl +++ b/cwls-docker/seqcksum.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/simple_phylogeny.cwl b/cwls-docker/simple_phylogeny.cwl index 8616fca..c28ac95 100644 --- a/cwls-docker/simple_phylogeny.cwl +++ b/cwls-docker/simple_phylogeny.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/tcoffee.cwl b/cwls-docker/tcoffee.cwl index c1d32bf..f1f31f8 100644 --- a/cwls-docker/tcoffee.cwl +++ b/cwls-docker/tcoffee.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls-docker/wise2dba.cwl b/cwls-docker/wise2dba.cwl index 36a38de..6ad87f5 100644 --- a/cwls-docker/wise2dba.cwl +++ b/cwls-docker/wise2dba.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/clustalo.cwl b/cwls/clustalo.cwl index 5285321..e65658f 100644 --- a/cwls/clustalo.cwl +++ b/cwls/clustalo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/dbfetch.cwl b/cwls/dbfetch.cwl index 3fa865c..60497b8 100755 --- a/cwls/dbfetch.cwl +++ b/cwls/dbfetch.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_backtranambig.cwl b/cwls/emboss_backtranambig.cwl index 007d706..61a8021 100644 --- a/cwls/emboss_backtranambig.cwl +++ b/cwls/emboss_backtranambig.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_backtranseq.cwl b/cwls/emboss_backtranseq.cwl index 6eeb427..d529acb 100644 --- a/cwls/emboss_backtranseq.cwl +++ b/cwls/emboss_backtranseq.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_cpgplot.cwl b/cwls/emboss_cpgplot.cwl index fde5ac3..b51bdc3 100644 --- a/cwls/emboss_cpgplot.cwl +++ b/cwls/emboss_cpgplot.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_dotmatcher.cwl b/cwls/emboss_dotmatcher.cwl index 31dee4a..bcc82de 100644 --- a/cwls/emboss_dotmatcher.cwl +++ b/cwls/emboss_dotmatcher.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_dotpath.cwl b/cwls/emboss_dotpath.cwl index 28595be..13106d9 100644 --- a/cwls/emboss_dotpath.cwl +++ b/cwls/emboss_dotpath.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_dottup.cwl b/cwls/emboss_dottup.cwl index 23e6229..07bafb2 100644 --- a/cwls/emboss_dottup.cwl +++ b/cwls/emboss_dottup.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_isochore.cwl b/cwls/emboss_isochore.cwl index c9ebbd9..1403926 100644 --- a/cwls/emboss_isochore.cwl +++ b/cwls/emboss_isochore.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_matcher.cwl b/cwls/emboss_matcher.cwl index 95fb8ce..dc7987b 100644 --- a/cwls/emboss_matcher.cwl +++ b/cwls/emboss_matcher.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_needle.cwl b/cwls/emboss_needle.cwl index 62d5949..5b75448 100644 --- a/cwls/emboss_needle.cwl +++ b/cwls/emboss_needle.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_newcpgreport.cwl b/cwls/emboss_newcpgreport.cwl index 6299256..ace093d 100644 --- a/cwls/emboss_newcpgreport.cwl +++ b/cwls/emboss_newcpgreport.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_pepinfo.cwl b/cwls/emboss_pepinfo.cwl index 050c2ec..7661f94 100644 --- a/cwls/emboss_pepinfo.cwl +++ b/cwls/emboss_pepinfo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_pepstats.cwl b/cwls/emboss_pepstats.cwl index 98d06b7..6e6361a 100644 --- a/cwls/emboss_pepstats.cwl +++ b/cwls/emboss_pepstats.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_pepwindow.cwl b/cwls/emboss_pepwindow.cwl index a13b877..ed15188 100644 --- a/cwls/emboss_pepwindow.cwl +++ b/cwls/emboss_pepwindow.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_polydot.cwl b/cwls/emboss_polydot.cwl index a3f29d8..448bc94 100644 --- a/cwls/emboss_polydot.cwl +++ b/cwls/emboss_polydot.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_seqret.cwl b/cwls/emboss_seqret.cwl index 9f8582e..f9200b5 100644 --- a/cwls/emboss_seqret.cwl +++ b/cwls/emboss_seqret.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_sixpack.cwl b/cwls/emboss_sixpack.cwl index 792e0ba..c8c32f2 100644 --- a/cwls/emboss_sixpack.cwl +++ b/cwls/emboss_sixpack.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_stretcher.cwl b/cwls/emboss_stretcher.cwl index 210d47c..d732e41 100644 --- a/cwls/emboss_stretcher.cwl +++ b/cwls/emboss_stretcher.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_transeq.cwl b/cwls/emboss_transeq.cwl index 009e015..e34e86c 100644 --- a/cwls/emboss_transeq.cwl +++ b/cwls/emboss_transeq.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/emboss_water.cwl b/cwls/emboss_water.cwl index ee144a3..16dc7ca 100644 --- a/cwls/emboss_water.cwl +++ b/cwls/emboss_water.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/fasta.cwl b/cwls/fasta.cwl index 4b24198..0fcbd0b 100644 --- a/cwls/fasta.cwl +++ b/cwls/fasta.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/fastm.cwl b/cwls/fastm.cwl index 77f9756..1ee94e0 100644 --- a/cwls/fastm.cwl +++ b/cwls/fastm.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/genewise.cwl b/cwls/genewise.cwl index 3c2349e..dd77cdf 100644 --- a/cwls/genewise.cwl +++ b/cwls/genewise.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/hmmer3_hmmscan.cwl b/cwls/hmmer3_hmmscan.cwl index e6b7b1b..371f46a 100644 --- a/cwls/hmmer3_hmmscan.cwl +++ b/cwls/hmmer3_hmmscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/hmmer3_phmmer.cwl b/cwls/hmmer3_phmmer.cwl index 4886a2e..c12702c 100644 --- a/cwls/hmmer3_phmmer.cwl +++ b/cwls/hmmer3_phmmer.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/infernal_cmscan.cwl b/cwls/infernal_cmscan.cwl index 394aa86..6fa2d7c 100644 --- a/cwls/infernal_cmscan.cwl +++ b/cwls/infernal_cmscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/iprscan5.cwl b/cwls/iprscan5.cwl index ea9601c..19ec235 100644 --- a/cwls/iprscan5.cwl +++ b/cwls/iprscan5.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/kalign.cwl b/cwls/kalign.cwl index f87bba7..0699b70 100644 --- a/cwls/kalign.cwl +++ b/cwls/kalign.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/lalign.cwl b/cwls/lalign.cwl index f089243..715d72b 100644 --- a/cwls/lalign.cwl +++ b/cwls/lalign.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/mafft.cwl b/cwls/mafft.cwl index 0969eab..d9898dc 100644 --- a/cwls/mafft.cwl +++ b/cwls/mafft.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/mapmi.cwl b/cwls/mapmi.cwl index a4fa707..5974441 100644 --- a/cwls/mapmi.cwl +++ b/cwls/mapmi.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/muscle.cwl b/cwls/muscle.cwl index 87f51d3..b4cafff 100644 --- a/cwls/muscle.cwl +++ b/cwls/muscle.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/mview.cwl b/cwls/mview.cwl index f50eb69..8596314 100644 --- a/cwls/mview.cwl +++ b/cwls/mview.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/ncbiblast.cwl b/cwls/ncbiblast.cwl index c6febce..33bb766 100644 --- a/cwls/ncbiblast.cwl +++ b/cwls/ncbiblast.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/pfamscan.cwl b/cwls/pfamscan.cwl index 8c9b17c..4543078 100644 --- a/cwls/pfamscan.cwl +++ b/cwls/pfamscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/phobius.cwl b/cwls/phobius.cwl index 0db3273..6c1272d 100644 --- a/cwls/phobius.cwl +++ b/cwls/phobius.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/prank.cwl b/cwls/prank.cwl index 8ed1000..4a2eeac 100644 --- a/cwls/prank.cwl +++ b/cwls/prank.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/pratt.cwl b/cwls/pratt.cwl index 437468a..5208277 100644 --- a/cwls/pratt.cwl +++ b/cwls/pratt.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/promoterwise.cwl b/cwls/promoterwise.cwl index 378507d..5bb20b3 100644 --- a/cwls/promoterwise.cwl +++ b/cwls/promoterwise.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/psiblast.cwl b/cwls/psiblast.cwl index e5e6750..ad1d24d 100644 --- a/cwls/psiblast.cwl +++ b/cwls/psiblast.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/psisearch.cwl b/cwls/psisearch.cwl index ad11775..4905aa8 100644 --- a/cwls/psisearch.cwl +++ b/cwls/psisearch.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/psisearch2.cwl b/cwls/psisearch2.cwl index 6590e67..04a6943 100644 --- a/cwls/psisearch2.cwl +++ b/cwls/psisearch2.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/radar.cwl b/cwls/radar.cwl index d128e1a..35efce5 100644 --- a/cwls/radar.cwl +++ b/cwls/radar.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/saps.cwl b/cwls/saps.cwl index 92b9003..bffab79 100644 --- a/cwls/saps.cwl +++ b/cwls/saps.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/seqcksum.cwl b/cwls/seqcksum.cwl index 5f60ef8..40c89ce 100644 --- a/cwls/seqcksum.cwl +++ b/cwls/seqcksum.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/simple_phylogeny.cwl b/cwls/simple_phylogeny.cwl index e7426aa..5e0a151 100644 --- a/cwls/simple_phylogeny.cwl +++ b/cwls/simple_phylogeny.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/tcoffee.cwl b/cwls/tcoffee.cwl index 70fe7df..30769b7 100644 --- a/cwls/tcoffee.cwl +++ b/cwls/tcoffee.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/cwls/wise2dba.cwl b/cwls/wise2dba.cwl index c596897..22cd874 100644 --- a/cwls/wise2dba.cwl +++ b/cwls/wise2dba.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute +# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/clustalo.cwl b/workflows/clustalo.cwl index 1ca52d5..b0bfa6c 100755 --- a/workflows/clustalo.cwl +++ b/workflows/clustalo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/dbfetch.cwl b/workflows/dbfetch.cwl index 064c050..8c6948c 100755 --- a/workflows/dbfetch.cwl +++ b/workflows/dbfetch.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/ebeye.cwl b/workflows/ebeye.cwl index aa242fc..ebf4155 100755 --- a/workflows/ebeye.cwl +++ b/workflows/ebeye.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/ebeye_API.cwl b/workflows/ebeye_API.cwl index 1978587..ddacd32 100755 --- a/workflows/ebeye_API.cwl +++ b/workflows/ebeye_API.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/emboss_backtranseq.cwl b/workflows/emboss_backtranseq.cwl index 1dc9678..45a1fb0 100755 --- a/workflows/emboss_backtranseq.cwl +++ b/workflows/emboss_backtranseq.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/emboss_cpgplot.cwl b/workflows/emboss_cpgplot.cwl index e8a0498..16403ac 100755 --- a/workflows/emboss_cpgplot.cwl +++ b/workflows/emboss_cpgplot.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/emboss_pepinfo.cwl b/workflows/emboss_pepinfo.cwl index fd51e32..a19bd9a 100755 --- a/workflows/emboss_pepinfo.cwl +++ b/workflows/emboss_pepinfo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/emboss_transeq.cwl b/workflows/emboss_transeq.cwl index ff7dfb1..f3a61c0 100755 --- a/workflows/emboss_transeq.cwl +++ b/workflows/emboss_transeq.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/fasta.cwl b/workflows/fasta.cwl index 40d477b..e2d94af 100755 --- a/workflows/fasta.cwl +++ b/workflows/fasta.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/hmmer3_hmmscan.cwl b/workflows/hmmer3_hmmscan.cwl index a1ff7bb..e5561e9 100755 --- a/workflows/hmmer3_hmmscan.cwl +++ b/workflows/hmmer3_hmmscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/hmmer3_phmmer.cwl b/workflows/hmmer3_phmmer.cwl index dc3199b..6a20388 100755 --- a/workflows/hmmer3_phmmer.cwl +++ b/workflows/hmmer3_phmmer.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/iprscan5.cwl b/workflows/iprscan5.cwl index 6ab9457..d8e58cc 100755 --- a/workflows/iprscan5.cwl +++ b/workflows/iprscan5.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/ncbiblast.cwl b/workflows/ncbiblast.cwl index f2d6a62..e87f710 100755 --- a/workflows/ncbiblast.cwl +++ b/workflows/ncbiblast.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/pdbe.cwl b/workflows/pdbe.cwl index 57d454b..1dd635a 100755 --- a/workflows/pdbe.cwl +++ b/workflows/pdbe.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/pdbe_API.cwl b/workflows/pdbe_API.cwl index e539491..711e19a 100755 --- a/workflows/pdbe_API.cwl +++ b/workflows/pdbe_API.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/phobius.cwl b/workflows/phobius.cwl index 5d9e953..189d1b1 100755 --- a/workflows/phobius.cwl +++ b/workflows/phobius.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/pratt.cwl b/workflows/pratt.cwl index f258e0c..9422324 100755 --- a/workflows/pratt.cwl +++ b/workflows/pratt.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/simple_phylogeny.cwl b/workflows/simple_phylogeny.cwl index 1260bda..876ef53 100755 --- a/workflows/simple_phylogeny.cwl +++ b/workflows/simple_phylogeny.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-blast-clustalo-phylogeny.cwl b/workflows/workflow-blast-clustalo-phylogeny.cwl index b6714ab..33c3801 100755 --- a/workflows/workflow-blast-clustalo-phylogeny.cwl +++ b/workflows/workflow-blast-clustalo-phylogeny.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-blast-ebeye-pdbe.cwl b/workflows/workflow-blast-ebeye-pdbe.cwl index 8937926..0f23db1 100755 --- a/workflows/workflow-blast-ebeye-pdbe.cwl +++ b/workflows/workflow-blast-ebeye-pdbe.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-blast-phobius.cwl b/workflows/workflow-blast-phobius.cwl index d9be025..55653b8 100755 --- a/workflows/workflow-blast-phobius.cwl +++ b/workflows/workflow-blast-phobius.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-ebisearch.cwl b/workflows/workflow-ebisearch.cwl index 422e820..de9309d 100755 --- a/workflows/workflow-ebisearch.cwl +++ b/workflows/workflow-ebisearch.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-fasta-pratt.cwl b/workflows/workflow-fasta-pratt.cwl index 4f1f4d7..8307819 100755 --- a/workflows/workflow-fasta-pratt.cwl +++ b/workflows/workflow-fasta-pratt.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-fetch-hmmscan.cwl b/workflows/workflow-fetch-hmmscan.cwl index 843c56e..b99bff6 100755 --- a/workflows/workflow-fetch-hmmscan.cwl +++ b/workflows/workflow-fetch-hmmscan.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-fetch-phobius.cwl b/workflows/workflow-fetch-phobius.cwl index 2b40614..afa13aa 100755 --- a/workflows/workflow-fetch-phobius.cwl +++ b/workflows/workflow-fetch-phobius.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-pepinfo-backtranseq-cpgplot.cwl b/workflows/workflow-pepinfo-backtranseq-cpgplot.cwl index bb5cd32..88d5559 100755 --- a/workflows/workflow-pepinfo-backtranseq-cpgplot.cwl +++ b/workflows/workflow-pepinfo-backtranseq-cpgplot.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-phmmer-blast.cwl b/workflows/workflow-phmmer-blast.cwl index c4b155c..319596a 100755 --- a/workflows/workflow-phmmer-blast.cwl +++ b/workflows/workflow-phmmer-blast.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/workflows/workflow-transeq-blast-clustalo.cwl b/workflows/workflow-transeq-blast-clustalo.cwl index e90666c..8fabeb4 100755 --- a/workflows/workflow-transeq-blast-clustalo.cwl +++ b/workflows/workflow-transeq-blast-clustalo.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -# Copyright (C) 2018 EMBL - European Bioinformatics Institute +# Copyright (C) 2018 - 2024 EMBL - European Bioinformatics Institute # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License.