remote_sensing_da.xml

<?xml version="1.0"?>
<pecan>
  <outdir>/home/dlebauer/pecan_remote/remote_sensing_da</outdir>
  <constants>
    <file>/home/dlebauer/dev/biocro_regional/inst/extdata/defaults/miscanthus_ebifarm2012.xml</file>
  </constants>
  <pfts>
    <pft>
      <name>Miscanthus_x_giganteus</name>
    </pft>
  </pfts>
  <meta.analysis>
    <iter>3000</iter>
    <random.effects>FALSE</random.effects>
  </meta.analysis>
  <ensemble>
    <size>500</size>
    <variable>StemBiom</variable>
    <variable>LAI</variable>
    <variable>TotLivBiom</variable>
    <variable>Yield</variable>
    <variable>Evap</variable>
    <variable>TVeg</variable>
  </ensemble>
  <sensitivity.analysis>
    <variable>StemBiom</variable>
    <variable>LAI</variable>
    <variable>TotLivBiom</variable>
    <variable>Yield</variable>
    <variable>Evap</variable>
    <variable>TVeg</variable>
    <start.year>2012</start.year>
    <end.year>2012</end.year>
  </sensitivity.analysis>
  <model>
    <type>BIOCRO</type>
    <id>12</id>
  </model>
  <run>
    <site>
      <id>368</id>
      <name>SoyFACE</name>	
      <lat>40.0415</lat>
      <lon>-88.2373</lon>
    </site>
      <inputs>
       <met>
        <id>305</id><!--305 is SoyFACE; 306 is EBI Farm-->
       </met>
       <soil>
        <id>303</id>
       </soil>
   </inputs>
    <start.date>2012-01-01 00:00:00</start.date>
    <end.date>2012-12-31 00:00:00</end.date>
    <host>
     <name>roger-login.ncsa.illinois.edu</name>
     <qsub>qsub -l walltime=05:00:00,nodes=5:ppn=10 -N @NAME@ -o @STDOUT@ -e @STDERR@</qsub>
     <qsub.jobid>lionxo_test ([0-9]+) .*</qsub.jobid>
     <qstat>qstat -j @JOBID@ 2&gt;1 &gt;/dev/null || echo DONE</qstat>
     <modellauncher>
       <binary>/home/dlebauer/dev/pecan/utils/modellauncher/modellauncher</binary>
       <qsub.extra>-l ncpus=10</qsub.extra>
     </modellauncher>
   <rundir>/home/dlebauer/pecan_remote/remote_sensing_da/run</rundir>
   <outdir>/home/dlebauer/pecan_remote/remote_sensing_da/out</outdir>
  </host>
  </run>
  <database>
    <bety>
      <driver>PostgreSQL</driver>
      <user>bety</user>
      <password>bety</password>
      <host>ebi-forecast.igb.illinois.edu</host>
      <dbname>ebi_production</dbname>
    </bety>
  </database>
  <bety>
    <write>TRUE</write>
  </bety>
</pecan>