Obsoletion notice: Proton-transporting ATP synthase complex terms (with replacement)

[raymond91125]

Dear all,

The proposal has been made to obsolete
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
GO:0045267 proton-transporting ATP synthase, catalytic core
GO:0045269 proton-transporting ATP synthase, central stalk
GO:0045265 proton-transporting ATP synthase, stator stalk

• The reason for obsoletion is that these terms represent subcomplexes that do not perform a distinct function.

There are experimental annotations by
AgBase 1
CACAO 2
EcoliWiki 8
GeneDB 16
RGD 22
SGD 28
TAIR 7 DONE
UniProt 10 DONE
EcoCyc 1
FlyBase 1
MTBBASE 1
PomBase 2

There are InterPro2GO/UniRule/UniProtKW mappings
GO:0045261 uniprotkb_kw2go UniProtKB-KW:KW-0139 CF(1) > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR000131 ATP synthase, F1 complex, gamma subunit > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR001469 ATP synthase, F1 complex, delta/epsilon subunit > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR005294 ATP synthase, F1 complex, alpha subunit > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR005722 ATP synthase, F1 complex, beta subunit > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR017691 ATP synthase subunit beta, bacterial and archaeal > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR017710 Alternate ATP synthase, F1 complex, subunit alpha > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045261 interpro2go InterPro:IPR035968 ATP synthase, F1 complex, gamma subunit superfamily > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
GO:0045263 uniprotkb_kw2go UniProtKB-KW:KW-0138 CF(0) > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR000454 ATP synthase, F0 complex, subunit C > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR000568 ATP synthase, F0 complex, subunit A > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR005864 ATP synthase, F0 complex, subunit b, bacterial > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR006995 ATP synthase, F0 complex, subunit J > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR009230 ATP synthase protein 8, fungal type > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR034679 ATP synthase, F0 complex, subunit b' > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR045082 ATP synthase, F0 complex, subunit A, bacterial/chloroplast > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 interpro2go InterPro:IPR045083 ATP synthase, F0 complex, subunit A, bacterial/mitochondria > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
GO:0045263 unirule2go UniRule:UR000310751 > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263

Annotations can be viewed here: geneontology/go-annotation#5580

These terms are being replaced by GO:0045259 proton-transporting ATP synthase complex.

Any comments can be added to the issue: geneontology/go-ontology#29067.

Thanks,

The GO-Ontology Editors