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Provide Documentation #34

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subwaystation opened this issue Mar 24, 2020 · 3 comments
Open

Provide Documentation #34

subwaystation opened this issue Mar 24, 2020 · 3 comments
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documentation Improvements or additions to documentation

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@subwaystation
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We need to document all necessary steps to go from https://github.com/vgteam/odgi over https://github.com/graph-genome/component_segmentation to https://github.com/graph-genome/Schematize/ and visualize the pangenome.
In each repository, we should document:

  • Input
  • What is happening?
  • Output

An overview and starting point for potential users could be our https://github.com/graph-genome/pipeline.
And people should be aware of our JBrowse2 plugin https://github.com/graph-genome/jbrowse-components.

@superjox @josiahseaman @6br

I hope I will have added some documentation until next week.

@subwaystation subwaystation self-assigned this Mar 24, 2020
@6br
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6br commented Mar 24, 2020

FYI: I am now trying to update the document on pipeline graph-genome/pipeline#11.

@subwaystation
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Cool that you already updated your pipeline! This will be our core one-stop-shop @6br :)
I am aware of your PR, but I did not find the time to review, yet....
Will do today ;)

@josiahseaman josiahseaman added the documentation Improvements or additions to documentation label Mar 24, 2020
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Our top level documentation and homepage is graph-genome.github.io

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