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Pass command-line parameters to Nextflow in a YAML file, instead of inline #7

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jmfernandez opened this issue Dec 3, 2019 · 0 comments
Open

Pass command-line parameters to Nextflow in a YAML file, instead of inline #7

jmfernandez opened this issue Dec 3, 2019 · 0 comments
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enhancement New feature or request

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@jmfernandez
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Right now, the wrapper generates the command line for Nextflow execution, which tends to be very long with all the input and output parameters. Also, it is not clear the way to pass a VRE array of parameters to Nextflow.

As Nextflow supports passing the parameters in a YAML file, the wrapper should exploit this feature
@jmfernandez jmfernandez added the enhancement New feature or request label Dec 3, 2019
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@jmfernandez