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PORT v0.8.2-beta 10/17/2016
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@eunjijunekim eunjijunekim released this 17 Oct 20:03
· 63 commits to main since this release
v0.8.2-beta
7e5731b
  • News
    • filter high expressers step runs much faster.
    • removed "gene:" from spreadsheets.
    • changed default reporting cutoff for high expressers to 3% (from 5%).
    • a new STATS directory is created when the '-alt_out' option is used (inside the -alt_out location).
    • aligner options for PORT compatibility provided for STAR and GSNAP (in README)
    • config file updated.
      • only takes one gene information file (GENE_INFO_FILE)
  • Bug fixes
    • convert gtf to gene info script bug fix (header).
    • removed hap chromosomes from hg19_ensGenes.txt file.
    • blast option fixed.
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