init

 #!/bin/bash          
 # Check that Python V 2.7.X is installed
case "$(python -V 2>&1)" in *" 2.7"*)
        echo [Init Pipeline] Python verision: Ok
        ;;
    *)
        echo [Init Pipeline] Wrong python version needs to be Python 2.7.X
        ;;
esac




#Checks that R is installed and version is newer that 2.14
RVersion=$(R --version | grep  "R version" | awk '{ print $3 }')
IFS='.' read -ra ADDR <<< "$RVersion"
if [[ ${ADDR[0]} -gt 2 ]] || [[ ${ADDR[0]} -eq 2 && ${ADDR[1]} -gt 14 ]]; then
    echo [Init Pipeline] R version: OK
    Rscript scripts/initR.R
else
    echo [Init Pipeline] Needs R version 2.15 or newer
fi

# Check for latex and latex packages
which pdflatex > /dev/null
pdflatexValue=$?
if [ $pdflatexValue -eq 0 ]; then
    bash scripts/initLatex.sh
else 
    echo [Init Pipeline] pdflatex is missing
fi