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Compare choices for the likelihood #31

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maxbiostat opened this issue Jun 5, 2020 · 0 comments
Open

Compare choices for the likelihood #31

maxbiostat opened this issue Jun 5, 2020 · 0 comments
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@maxbiostat
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This issue deals with the choice of likelihood. Let the data be Y_t and and let the solution to the ode be mu(t).

We can either say that

Y_t ~ negative_binomial(mu(t), sigma)

or

Y_t  ~ lognormal(log(mu(t)), sigma)

We should test (a) if these make a difference in terms of parameter estimates and ESSs and (b) whether one runs faster than the other.

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