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dron-chebi-mapper

Calls BioPortal API to look for matches in ChEBI to DrOn ingredient terms derived from RxNorm

mvn compile mvn dependency:copy-dependencies <put your own BioPortal API key in a file src/main/resources/api-key.txt> //NOTE: this file is git ignored if you name it exactly thusly java -cp "./target/dependency/*:./target/classes" edu.ufl.bmi.ontology.ChebiClassSearcher ./src/main/resources/config.properties > dron-chebi-mappings.txt & <it will run for ahwile - it's a big input file>