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Jenkinsfile
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pipeline {
/*
* Defining where to run
*/
//// Any:
// agent any
//// By agent label:
// agent { label 'sandybridge' }
agent { label 'jenkinsfile' }
triggers {
pollSCM('H/15 * * * *')
}
environment {
XX="gcc"
}
options {
disableConcurrentBuilds()
buildDiscarder(logRotator(numToKeepStr: '100'))
timestamps()
}
stages {
stage ('build') {
steps {
sh '''#!/bin/bash -le
module purge
module load ecrc-extras
module load mkl/2020.0.166
module load gcc/10.2.0
module load cmake/3.21.2
module load hwloc/2.4.0-gcc-10.2.0
module load openmpi/4.1.0-gcc-10.2.0
module load starpu/1.3.9-gcc-10.2.0-mkl-openmpi-4.1.0
module load gsl/2.6-gcc-10.2.0
module load nlopt/2.7.0-gcc-10.2.0
module load hdf5/1.12.0-gcc-10.2.0
module load netcdf/4.7.4-gcc-10.2.0
module list
set -x
export EXAGEOSTATDEVDIR=$PWD
export HICMADIR=$EXAGEOSTATDEVDIR/hicma
export CHAMELEONDIR=$EXAGEOSTATDEVDIR/chameleon
export STARSHDIR=$HICMADIR/stars-h
export HCOREDIR=$HICMADIR/hcore
export HICMAINSTALLDIR=$HICMADIR/dependencies-prefix
## CHAMELEON
# Update submodules
git submodule update --init --recursive
cd $CHAMELEONDIR
git checkout release-1.1.0
#install Chameleon
rm -rf build
mkdir -p build/installdir
cd build
cmake .. -DCMAKE_INSTALL_PREFIX=$PWD/installdir -DCMAKE_C_FLAGS=-fPIC -DCHAMELEON_USE_MPI=OFF -DCMAKE_BUILD_TYPE="Release" \
-DCMAKE_C_FLAGS_RELEASE="-O3 -Ofast -w" -DCHAMELEON_USE_CUDA=OFF -DCHAMELEON_ENABLE_EXAMPLE=OFF \
-DCHAMELEON_ENABLE_TESTING=OFF -DCHAMELEON_ENABLE_TIMING=OFF -DBUILD_SHARED_LIBS=OFF
make clean
make -j # CHAMELEON parallel build seems to be fixed
make install
export PKG_CONFIG_PATH=$PWD/installdir/lib/pkgconfig:$PKG_CONFIG_PATH
## HICMA
cd $HICMADIR
git submodule update --init --recursive
mkdir -p $HICMAINSTALLDIR
rm -rf $HICMAINSTALLDIR/*
# STARS-H
cd $STARSHDIR
rm -rf build
mkdir -p build
cd build
cmake .. -DCMAKE_INSTALL_PREFIX=$HICMAINSTALLDIR -DMPI=OFF -DOPENMP=OFF -DSTARPU=OFF -DBUILD_SHARED_LIBS=ON -DCMAKE_C_FLAGS=-fPIC -DCMAKE_C_FLAGS_RELEASE="-O3 -Ofast -w"
make clean
make -j
make install
## HCORE
cd $HCOREDIR
rm -rf build
mkdir -p build
cd build
cmake .. -DCMAKE_INSTALL_PREFIX=$HICMAINSTALLDIR -DCMAKE_C_FLAGS=-fPIC -DBUILD_SHARED_LIBS=ON -DCMAKE_C_FLAGS_RELEASE="-O3 -Ofast -w"
make clean
make -j
make install
export PKG_CONFIG_PATH=$HICMAINSTALLDIR/lib/pkgconfig:$PKG_CONFIG_PATH
cd $HICMADIR
rm -rf build
mkdir -p build/installdir
cd build
cmake .. -DCMAKE_INSTALL_PREFIX=$PWD/installdir -DCMAKE_C_FLAGS=-fPIC -DHICMA_USE_MPI="$MPI_VALUE" -DCMAKE_BUILD_TYPE="Release" \
-DCMAKE_C_FLAGS_RELEASE="-O3 -Ofast -w" -DBUILD_SHARED_LIBS=ON -DCMAKE_C_FLAGS="-fcommon"
make clean
make -j
make install
export PKG_CONFIG_PATH=$PWD/installdir/lib/pkgconfig:$PKG_CONFIG_PATH
# EXAGEOSTAT
cd $EXAGEOSTATDEVDIR
rm -rf build
mkdir -p build/installdir
cd build
CFLAGS="-fcommon" cmake .. \
-DCMAKE_INSTALL_PREFIX=$PWD/installdir \
-DEXAGEOSTAT_SCHED_STARPU=ON \
-DEXAGEOSTAT_USE_MPI=OFF \
-DEXAGEOSTAT_PACKAGE=ON \
-DCMAKE_BUILD_TYPE=Release \
-DEXAGEOSTAT_USE_STARSH=ON \
-DEXAGEOSTAT_USE_HICMA=ON \
-DEXAGEOSTAT_USE_NETCDF=ON \
-DEXAGEOSTAT_USE_CHAMELEON=ON \
-DEXAGEOSTAT_INSTALL_DEPS=OFF \
-DMPI_VALUE=OFF \
-DCUDA_VALUE=OFF \
-DCMAKE_C_FLAGS_RELEASE="-O3 -Ofast -w" \
-DBUILD_SHARED_LIBS=ON
make clean
make -j || make VERBOSE=1
make install
'''
}
}
stage ('test') {
steps {
sh '''#!/bin/bash -le
module purge
module load ecrc-extras
module load mkl/2020.0.166
module load gcc/10.2.0
module load cmake/3.21.2
module load hwloc/2.4.0-gcc-10.2.0
module load openmpi/4.1.0-gcc-10.2.0
module load starpu/1.3.9-gcc-10.2.0-mkl-openmpi-4.1.0
module load gsl/2.6-gcc-10.2.0
module load nlopt/2.7.0-gcc-10.2.0
module load hdf5/1.12.0-gcc-10.2.0
module load netcdf/4.7.4-gcc-10.2.0
module list
set -x
cd build
rm -rf Testing
ctest --no-compress-output -T Test
'''
step([$class: 'XUnitBuilder',
thresholds: [[$class: 'FailedThreshold', unstableThreshold: '0']],
tools: [[$class: 'CTestType', pattern: 'build/Testing/**/Test.xml']]])
}
}
stage ('docs') {
steps {
sh "cd $WORKSPACE/build && make docs"
sh '''#!/bin/bash -ex
cd $WORKSPACE
rm -rf cppcheckhtml
cppcheck --enable=all --xml --xml-version=2 exageostat_approx/ exageostat_exact/ examples/ misc/ src/ r-wrappers/ -I include/ 2> cppcheck.xml
cppcheck-htmlreport --source-encoding="iso8859-1" --title="ExaGeoStat" --source-dir=. --report-dir=cppcheckhtml --file=cppcheck.xml
'''
publishHTML( target: [allowMissing: false, alwaysLinkToLastBuild: false, keepAll: false, reportDir: 'cppcheckhtml', reportFiles: 'index.html', reportName: 'CppCheckReport', reportTitles: ''] )
publishHTML( target: [allowMissing: false, alwaysLinkToLastBuild: false, keepAll: false, reportDir: 'build/docs/build/html', reportFiles: 'index.html', reportName: 'Doxygen Documentation', reportTitles: ''] )
}
}
stage ('packages') {
steps {
sh "cd $WORKSPACE/build && make package"
archiveArtifacts allowEmptyArchive: true, artifacts: 'build/exageostat-*gz'
}
}
}
// Post build actions
post {
unstable {
emailext body: "${env.JOB_NAME} - Please go to ${env.BUILD_URL}", subject: "Jenkins Pipeline build is UNSTABLE", recipientProviders: [culprits(),requestor()]
}
fixed {
emailext body: "${env.JOB_NAME} - Please go to ${env.BUILD_URL}", subject: "Jenkins Pipeline build FIXED!", recipientProviders: [culprits(),requestor()]
}
failure {
emailext body: "${env.JOB_NAME} - Please go to ${env.BUILD_URL}", subject: "Jenkins Pipeline build FAILED", recipientProviders: [culprits(),requestor()]
}
}
}