database_construction.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-29T16:39:49.683346Z",
     "start_time": "2022-11-29T16:39:49.672499Z"
    }
   },
   "outputs": [],
   "source": []
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:38:48.596253Z",
     "start_time": "2023-05-18T01:38:47.397775Z"
    }
   },
   "outputs": [],
   "source": [
    "import os\n",
    "import sys\n",
    "import importlib as imp\n",
    "import cooler\n",
    "import shelve\n",
    "from collections import defaultdict\n",
    "\n",
    "from pandas.api.types import CategoricalDtype\n",
    "\n",
    "from cooler import Cooler\n",
    "\n",
    "import mitosis_manager as mm\n",
    "%matplotlib inline"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T00:25:01.376399Z",
     "start_time": "2022-11-02T00:25:01.361010Z"
    }
   },
   "source": [
    "# Creating initial database from list of cooler files"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Processing cooler library names"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-12-15T18:18:08.148727Z",
     "start_time": "2022-12-15T18:18:08.109281Z"
    },
    "code_folding": [],
    "scrolled": true
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
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      "SMC3-CTCF-AID-5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-CTCF-AID-5min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-CTCF-AID-7.5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-CTCF-AID-7.5min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-CTCF-AID-G2-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-CTCF-AID-G2-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-10min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-15min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-2.5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-30min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-7.5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-KIF4-AID-G2-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-10min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-15min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-2.5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-30min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-7.5min-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3-SMC2-AID-G2-S1-R1-SpnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC3.galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-10min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-15min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-2.5min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-30min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-5min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-7.5min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "SMC5-AID-G2-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-10min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-10min-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-11min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-11min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-11min-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-15min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-15min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-15min-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-15min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-15min-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-2.5min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-2.5min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-2.5min-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-2.5min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-2.5min-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-30min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-30min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-30min-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-30min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-30min-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-5min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-5min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-5min-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-5min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-5min-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-7.5min-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-7.5min-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-7.5min-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-7.5min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-7.5min-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-G2-S1-R1-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-G2-S2-R1-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-G2-S3-R2-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-G2-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WAPL-AID-G2-S5-R3-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WT-10min-S4-R3-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-10min-S5-R4-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-15min-S4-R3-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-15min-S5-R4-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-2.5min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-2.5min-S5-R3-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-30min-S5-R5-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-30min-S6-R6-spNa__galGal7b.mapq_30.1000.mcool\n",
      "WT-5min-S4-R3-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-5min-S5-R4-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-60min-S5-R4-spMa__galGal7b.mapq_30.1000.mcool\n",
      "WT-7.5min-S4-R2-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-7.5min-S5-R3-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-90min-S5-R1-spMa__galGal7b.mapq_30.1000.mcool\n",
      "WT-G2-S4-R5-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-G2-S5-R6-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-G2-S5-R7-spnA__galGal7b.mapq_30.1000.mcool\n",
      "WT-G2-S5-R8-spna__galGal7b.mapq_30.1000.mcool\n",
      "WT-G2-S6-R9-spna__galGal7b.mapq_30.1000.mcool\n"
     ]
    }
   ],
   "source": [
    "libraries = []\n",
    "for filename in np.sort(os.listdir(f'{mm.base_path}/coolers/')):\n",
    "    print(filename)\n",
    "    if 'mapq_30.1000.mcool' in filename:\n",
    "        f = filename.split('.g')[0].split('__')[0]\n",
    "        libraries.append(f)\n",
    "        \n",
    "libraries = np.sort(np.asarray(libraries))\n",
    "# libraries"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-12-15T18:18:09.265037Z",
     "start_time": "2022-12-15T18:18:08.822783Z"
    },
    "scrolled": true
   },
   "outputs": [
    {
     "data": {
      "text/html": [
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       "<style scoped>\n",
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       "\n",
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       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>CAPH-AID-G2-S3-R5-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>CAPH-AID-2.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>CAPH-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>CAPH-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>CAPH-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>5</th>\n",
       "      <td>CAPH-AID-15min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>6</th>\n",
       "      <td>CAPH-AID-30min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                     lib_name condition    time replicate      S    N/M     A\n",
       "0      CAPH-AID-G2-S3-R5-spnA      CAPH      G2        S3  False  False  True\n",
       "1  CAPH-AID-2.5min-S3-R3-spnA      CAPH  2.5min        S3  False  False  True\n",
       "2  CAPH-AID-7.5min-S3-R3-spnA      CAPH    5min        S3  False  False  True\n",
       "3    CAPH-AID-5min-S3-R3-spnA      CAPH  7.5min        S3  False  False  True\n",
       "4   CAPH-AID-10min-S3-R3-spnA      CAPH   10min        S3  False  False  True\n",
       "5   CAPH-AID-15min-S3-R3-spnA      CAPH   15min        S3  False  False  True\n",
       "6   CAPH-AID-30min-S3-R3-spnA      CAPH   30min        S3  False  False  True"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
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       "  <thead>\n",
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       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>7</th>\n",
       "      <td>CAPH2-AID-G2-S3-R5-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>8</th>\n",
       "      <td>CAPH2-AID-2.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>9</th>\n",
       "      <td>CAPH2-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>10</th>\n",
       "      <td>CAPH2-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>11</th>\n",
       "      <td>CAPH2-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>12</th>\n",
       "      <td>CAPH2-AID-15min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>13</th>\n",
       "      <td>CAPH2-AID-30min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "7       CAPH2-AID-G2-S3-R5-spnA     CAPH2      G2        S3  False  False   \n",
       "8   CAPH2-AID-2.5min-S3-R3-spnA     CAPH2  2.5min        S3  False  False   \n",
       "9     CAPH2-AID-5min-S3-R3-spnA     CAPH2    5min        S3  False  False   \n",
       "10  CAPH2-AID-7.5min-S3-R3-spnA     CAPH2  7.5min        S3  False  False   \n",
       "11   CAPH2-AID-10min-S3-R3-spnA     CAPH2   10min        S3  False  False   \n",
       "12   CAPH2-AID-15min-S3-R3-spnA     CAPH2   15min        S3  False  False   \n",
       "13   CAPH2-AID-30min-S3-R3-spnA     CAPH2   30min        S3  False  False   \n",
       "\n",
       "       A  \n",
       "7   True  \n",
       "8   True  \n",
       "9   True  \n",
       "10  True  \n",
       "11  True  \n",
       "12  True  \n",
       "13  True  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
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     "data": {
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       "\n",
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       "\n",
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       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>14</th>\n",
       "      <td>CAPH2-AID-G2-S4-R6-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>CAPH2-AID-5min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>CAPH2-AID-10min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>CAPH2-AID-15min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>18</th>\n",
       "      <td>CAPH2-AID-15min-S4-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>19</th>\n",
       "      <td>CAPH2-AID-15min-S4-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>20</th>\n",
       "      <td>CAPH2-AID-30min-S4-R4-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>21</th>\n",
       "      <td>CAPH2-AID-30min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>22</th>\n",
       "      <td>CAPH2-AID-30min-S4-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>23</th>\n",
       "      <td>CAPH2-AID-30min-S4-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>24</th>\n",
       "      <td>CAPH2-AID-30min-S4-R8-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                      lib_name condition   time replicate      S    N/M      A\n",
       "14     CAPH2-AID-G2-S4-R6-spnA     CAPH2     G2        S4  False  False   True\n",
       "15   CAPH2-AID-5min-S4-R4-spnA     CAPH2   5min        S4  False  False   True\n",
       "16  CAPH2-AID-10min-S4-R4-spnA     CAPH2  10min        S4  False  False   True\n",
       "17  CAPH2-AID-15min-S4-R4-spnA     CAPH2  15min        S4  False  False   True\n",
       "18  CAPH2-AID-15min-S4-R5-spNA     CAPH2  15min        S4  False   True   True\n",
       "19  CAPH2-AID-15min-S4-R6-spNA     CAPH2  15min        S4  False   True   True\n",
       "20  CAPH2-AID-30min-S4-R4-spNa     CAPH2  30min        S4  False   True  False\n",
       "21  CAPH2-AID-30min-S4-R4-spnA     CAPH2  30min        S4  False  False   True\n",
       "22  CAPH2-AID-30min-S4-R5-spNA     CAPH2  30min        S4  False   True   True\n",
       "23  CAPH2-AID-30min-S4-R6-spNA     CAPH2  30min        S4  False   True   True\n",
       "24  CAPH2-AID-30min-S4-R8-spNa     CAPH2  30min        S4  False   True  False"
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       "      <th>A</th>\n",
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       "  <tbody>\n",
       "    <tr>\n",
       "      <th>25</th>\n",
       "      <td>CAPH2-AID-G2-S5-R7-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>26</th>\n",
       "      <td>CAPH2-AID-10min-S5-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>27</th>\n",
       "      <td>CAPH2-AID-15min-S5-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>28</th>\n",
       "      <td>CAPH2-AID-30min-S5-R9-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>29</th>\n",
       "      <td>CAPH2-AID-60min-S5-R3-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                      lib_name condition   time replicate      S   N/M     A\n",
       "25     CAPH2-AID-G2-S5-R7-spNA     CAPH2     G2        S5  False  True  True\n",
       "26  CAPH2-AID-10min-S5-R5-spNA     CAPH2  10min        S5  False  True  True\n",
       "27  CAPH2-AID-15min-S5-R6-spNA     CAPH2  15min        S5  False  True  True\n",
       "28  CAPH2-AID-30min-S5-R9-spNA     CAPH2  30min        S5  False  True  True\n",
       "29  CAPH2-AID-60min-S5-R3-spNA     CAPH2  60min        S5  False  True  True"
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       "      <th>A</th>\n",
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       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>30</th>\n",
       "      <td>CAPH2-AID-G2-S6-R8-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>31</th>\n",
       "      <td>CAPH2-AID-10min-S6-R6-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>32</th>\n",
       "      <td>CAPH2-AID-15min-S6-R7-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>33</th>\n",
       "      <td>CAPH2-AID-30min-S6-R10-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>34</th>\n",
       "      <td>CAPH2-AID-60min-S6-R3-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                       lib_name condition   time replicate      S   N/M      A\n",
       "30      CAPH2-AID-G2-S6-R8-spNa     CAPH2     G2        S6  False  True  False\n",
       "31   CAPH2-AID-10min-S6-R6-spNa     CAPH2  10min        S6  False  True  False\n",
       "32   CAPH2-AID-15min-S6-R7-spNa     CAPH2  15min        S6  False  True  False\n",
       "33  CAPH2-AID-30min-S6-R10-spNa     CAPH2  30min        S6  False  True  False\n",
       "34   CAPH2-AID-60min-S6-R3-spNa     CAPH2  60min        S6  False  True  False"
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       "      <th>A</th>\n",
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       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>35</th>\n",
       "      <td>CAPH2-AID-G2-S7-R9-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>36</th>\n",
       "      <td>CAPH2-AID-15min-S7-R8-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>37</th>\n",
       "      <td>CAPH2-AID-30min-S7-R11-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>38</th>\n",
       "      <td>CAPH2-AID-60min-S7-R4-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
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      "text/plain": [
       "                       lib_name condition   time replicate     S   N/M     A\n",
       "35      CAPH2-AID-G2-S7-R9-SpNA     CAPH2     G2        S7  True  True  True\n",
       "36   CAPH2-AID-15min-S7-R8-SpNA     CAPH2  15min        S7  True  True  True\n",
       "37  CAPH2-AID-30min-S7-R11-SpNA     CAPH2  30min        S7  True  True  True\n",
       "38   CAPH2-AID-60min-S7-R4-SpNA     CAPH2  60min        S7  True  True  True"
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       "    <tr>\n",
       "      <th>39</th>\n",
       "      <td>CTCF-AID-G2-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>G2</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>40</th>\n",
       "      <td>CTCF-AID-2.5min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>41</th>\n",
       "      <td>CTCF-AID-5min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>42</th>\n",
       "      <td>CTCF-AID-7.5min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>43</th>\n",
       "      <td>CTCF-AID-10min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>44</th>\n",
       "      <td>CTCF-AID-15min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>15min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>45</th>\n",
       "      <td>CTCF-AID-30min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "  </tbody>\n",
       "</table>\n",
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      ],
      "text/plain": [
       "                      lib_name condition    time replicate     S    N/M     A\n",
       "39      CTCF-AID-G2-S1-R1-SpnA      CTCF      G2        S1  True  False  True\n",
       "40  CTCF-AID-2.5min-S1-R1-SpnA      CTCF  2.5min        S1  True  False  True\n",
       "41    CTCF-AID-5min-S1-R1-SpnA      CTCF    5min        S1  True  False  True\n",
       "42  CTCF-AID-7.5min-S1-R1-SpnA      CTCF  7.5min        S1  True  False  True\n",
       "43   CTCF-AID-10min-S1-R1-SpnA      CTCF   10min        S1  True  False  True\n",
       "44   CTCF-AID-15min-S1-R1-SpnA      CTCF   15min        S1  True  False  True\n",
       "45   CTCF-AID-30min-S1-R1-SpnA      CTCF   30min        S1  True  False  True"
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       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>46</th>\n",
       "      <td>AID-KIF4-G2-S3-R5-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>47</th>\n",
       "      <td>AID-KIF4-G2-S3-R6-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>48</th>\n",
       "      <td>AID-KIF4-2.5min-S3-R1-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>49</th>\n",
       "      <td>AID-KIF4-5min-S3-R1-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>50</th>\n",
       "      <td>AID-KIF4-7.5min-S3-R3-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>51</th>\n",
       "      <td>AID-KIF4-10min-S3-R3-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>52</th>\n",
       "      <td>AID-KIF4-15min-S3-R3-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>53</th>\n",
       "      <td>AID-KIF4-30min-S3-R3-pna</td>\n",
       "      <td>KIF4</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>NaN</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                     lib_name condition    time replicate    S    N/M      A\n",
       "46      AID-KIF4-G2-S3-R5-pna      KIF4      G2        S3  NaN  False  False\n",
       "47      AID-KIF4-G2-S3-R6-pna      KIF4      G2        S3  NaN  False  False\n",
       "48  AID-KIF4-2.5min-S3-R1-pna      KIF4  2.5min        S3  NaN  False  False\n",
       "49    AID-KIF4-5min-S3-R1-pna      KIF4    5min        S3  NaN  False  False\n",
       "50  AID-KIF4-7.5min-S3-R3-pna      KIF4  7.5min        S3  NaN  False  False\n",
       "51   AID-KIF4-10min-S3-R3-pna      KIF4   10min        S3  NaN  False  False\n",
       "52   AID-KIF4-15min-S3-R3-pna      KIF4   15min        S3  NaN  False  False\n",
       "53   AID-KIF4-30min-S3-R3-pna      KIF4   30min        S3  NaN  False  False"
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       "    <tr>\n",
       "      <th>54</th>\n",
       "      <td>SMC2-AID-G2-S3-R4-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>G2</td>\n",
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       "      <th>55</th>\n",
       "      <td>SMC2-AID-2.5min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>2.5min</td>\n",
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       "      <td>False</td>\n",
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       "      <th>56</th>\n",
       "      <td>SMC2-AID-5min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>5min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>57</th>\n",
       "      <td>SMC2-AID-7.5min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "      <th>58</th>\n",
       "      <td>SMC2-AID-10min-S3-R3-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>59</th>\n",
       "      <td>SMC2-AID-15min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>15min</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>60</th>\n",
       "      <td>SMC2-AID-30min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "                      lib_name condition    time replicate      S    N/M     A\n",
       "54      SMC2-AID-G2-S3-R4-spnA      SMC2      G2        S3  False  False  True\n",
       "55  SMC2-AID-2.5min-S3-R2-spnA      SMC2  2.5min        S3  False  False  True\n",
       "56    SMC2-AID-5min-S3-R2-spnA      SMC2    5min        S3  False  False  True\n",
       "57  SMC2-AID-7.5min-S3-R2-spnA      SMC2  7.5min        S3  False  False  True\n",
       "58   SMC2-AID-10min-S3-R3-spnA      SMC2   10min        S3  False  False  True\n",
       "59   SMC2-AID-15min-S3-R2-spnA      SMC2   15min        S3  False  False  True\n",
       "60   SMC2-AID-30min-S3-R2-spnA      SMC2   30min        S3  False  False  True"
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       "      <th>61</th>\n",
       "      <td>SMC2-AID-G2-S4-R5-spNA</td>\n",
       "      <td>SMC2</td>\n",
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       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>62</th>\n",
       "      <td>SMC2-AID-2.5min-S4-R2-spNA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>2.5min</td>\n",
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       "      <td>True</td>\n",
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       "      <th>63</th>\n",
       "      <td>SMC2-AID-5min-S4-R2-spNA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>5min</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>64</th>\n",
       "      <td>SMC2-AID-15min-S4-R2-spNA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>10min</td>\n",
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       "      <td>SMC2-AID-10min-S4-R4-spNA</td>\n",
       "      <td>SMC2</td>\n",
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       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>66</th>\n",
       "      <td>SMC2-AID-30min-S4-R2-spNA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>30min</td>\n",
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       "                      lib_name condition    time replicate      S   N/M     A\n",
       "61      SMC2-AID-G2-S4-R5-spNA      SMC2      G2        S4  False  True  True\n",
       "62  SMC2-AID-2.5min-S4-R2-spNA      SMC2  2.5min        S4  False  True  True\n",
       "63    SMC2-AID-5min-S4-R2-spNA      SMC2    5min        S4  False  True  True\n",
       "64   SMC2-AID-15min-S4-R2-spNA      SMC2   10min        S4  False  True  True\n",
       "65   SMC2-AID-10min-S4-R4-spNA      SMC2   15min        S4  False  True  True\n",
       "66   SMC2-AID-30min-S4-R2-spNA      SMC2   30min        S4  False  True  True"
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       "      <th>67</th>\n",
       "      <td>SMC2-AID-7.5min-S5-R3-spnA</td>\n",
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       "                      lib_name condition    time replicate      S    N/M     A\n",
       "67  SMC2-AID-7.5min-S5-R3-spnA      SMC2  7.5min        S5  False  False  True"
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       "      <th>71</th>\n",
       "      <td>SMC2-WAPL-AID-7.5min-S1-R1-spnA</td>\n",
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       "      <th>72</th>\n",
       "      <td>SMC2-WAPL-AID-10min-S1-R1-spnA</td>\n",
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       "      <td>True</td>\n",
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       "      <td>SMC2-WAPL-AID-15min-S1-R1-spnA</td>\n",
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       "      <td>SMC2-WAPL-AID-30min-S1-R1-spnA</td>\n",
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       "      <td>30min</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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      "text/plain": [
       "                           lib_name  condition    time replicate      S  \\\n",
       "68      SMC2-WAPL-AID-G2-S1-R1-spnA  SMC2-WAPL      G2        S1  False   \n",
       "69  SMC2-WAPL-AID-2.5min-S1-R1-spnA  SMC2-WAPL  2.5min        S1  False   \n",
       "70    SMC2-WAPL-AID-5min-S1-R1-spnA  SMC2-WAPL    5min        S1  False   \n",
       "71  SMC2-WAPL-AID-7.5min-S1-R1-spnA  SMC2-WAPL  7.5min        S1  False   \n",
       "72   SMC2-WAPL-AID-10min-S1-R1-spnA  SMC2-WAPL   10min        S1  False   \n",
       "73   SMC2-WAPL-AID-15min-S1-R1-spnA  SMC2-WAPL   15min        S1  False   \n",
       "74   SMC2-WAPL-AID-30min-S1-R1-spnA  SMC2-WAPL   30min        S1  False   \n",
       "\n",
       "      N/M     A  \n",
       "68  False  True  \n",
       "69  False  True  \n",
       "70  False  True  \n",
       "71  False  True  \n",
       "72  False  True  \n",
       "73  False  True  \n",
       "74  False  True  "
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       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>75</th>\n",
       "      <td>SMC2-WAPL-AID-G2-S2-R1-spNA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>G2</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>76</th>\n",
       "      <td>SMC2-WAPL-AID-2.5min-S2-R1-spNA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>77</th>\n",
       "      <td>SMC2-WAPL-AID-7.5min-S2-R1-spNA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>78</th>\n",
       "      <td>SMC2-WAPL-AID-10min-S2-R1-spNA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>10min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>79</th>\n",
       "      <td>SMC2-WAPL-AID-15min-S2-R1-spNA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>15min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>80</th>\n",
       "      <td>SMC2-WAPL-AID-30min-S2-R1-spNA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>30min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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      "text/plain": [
       "                           lib_name  condition    time replicate      S   N/M  \\\n",
       "75      SMC2-WAPL-AID-G2-S2-R1-spNA  SMC2-WAPL      G2        S2  False  True   \n",
       "76  SMC2-WAPL-AID-2.5min-S2-R1-spNA  SMC2-WAPL  2.5min        S2  False  True   \n",
       "77  SMC2-WAPL-AID-7.5min-S2-R1-spNA  SMC2-WAPL  7.5min        S2  False  True   \n",
       "78   SMC2-WAPL-AID-10min-S2-R1-spNA  SMC2-WAPL   10min        S2  False  True   \n",
       "79   SMC2-WAPL-AID-15min-S2-R1-spNA  SMC2-WAPL   15min        S2  False  True   \n",
       "80   SMC2-WAPL-AID-30min-S2-R1-spNA  SMC2-WAPL   30min        S2  False  True   \n",
       "\n",
       "       A  \n",
       "75  True  \n",
       "76  True  \n",
       "77  True  \n",
       "78  True  \n",
       "79  True  \n",
       "80  True  "
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       "      <td>SMC3-AID-G2-S1-R1-spna</td>\n",
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       "      <th>86</th>\n",
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       "                      lib_name condition    time replicate      S    N/M  \\\n",
       "81      SMC3-AID-G2-S1-R1-spna      SMC3      G2        S1  False  False   \n",
       "82  SMC3-AID-2.5min-S1-R1-spna      SMC3  2.5min        S1  False  False   \n",
       "83    SMC3-AID-5min-S1-R1-spna      SMC3    5min        S1  False  False   \n",
       "84  SMC3-AID-7.5min-S1-R1-spna      SMC3  7.5min        S1  False  False   \n",
       "85   SMC3-AID-10min-S1-R1-spna      SMC3   10min        S1  False  False   \n",
       "86   SMC3-AID-15min-S1-R1-spna      SMC3   15min        S1  False  False   \n",
       "87   SMC3-AID-30min-S1-R1-spna      SMC3   30min        S1  False  False   \n",
       "\n",
       "        A  \n",
       "81  False  \n",
       "82  False  \n",
       "83  False  \n",
       "84  False  \n",
       "85  False  \n",
       "86  False  \n",
       "87  False  "
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       "      <th>94</th>\n",
       "      <td>SMC3-AID-30min-S2-R2-SpnA</td>\n",
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       "                      lib_name condition    time replicate     S    N/M     A\n",
       "88      SMC3-AID-G2-S2-R2-SpnA      SMC3      G2        S2  True  False  True\n",
       "89  SMC3-AID-2.5min-S2-R2-SpnA      SMC3  2.5min        S2  True  False  True\n",
       "90    SMC3-AID-5min-S2-R2-SpnA      SMC3    5min        S2  True  False  True\n",
       "91  SMC3-AID-7.5min-S2-R2-SpnA      SMC3  7.5min        S2  True  False  True\n",
       "92   SMC3-AID-10min-S2-R2-SpnA      SMC3   10min        S2  True  False  True\n",
       "93   SMC3-AID-15min-S2-R2-SpnA      SMC3   15min        S2  True  False  True\n",
       "94   SMC3-AID-30min-S2-R2-SpnA      SMC3   30min        S2  True  False  True"
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       "      <th>101</th>\n",
       "      <td>SMC3-AID-30min-S3-R3-spnA</td>\n",
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       "      <th>102</th>\n",
       "      <td>SMC3-AID-60min-S3-R1-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>60min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>103</th>\n",
       "      <td>SMC3-AID-90min-S3-R1-spnA</td>\n",
       "      <td>SMC3</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "95       SMC3-AID-G2-S3-R3-spnA      SMC3      G2        S3  False  False   \n",
       "96   SMC3-AID-2.5min-S3-R3-spnA      SMC3  2.5min        S3  False  False   \n",
       "97     SMC3-AID-5min-S3-R3-spnA      SMC3    5min        S3  False  False   \n",
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       "99    SMC3-AID-10min-S3-R3-spnA      SMC3   10min        S3  False  False   \n",
       "100   SMC3-AID-15min-S3-R3-spnA      SMC3   15min        S3  False  False   \n",
       "101   SMC3-AID-30min-S3-R3-spnA      SMC3   30min        S3  False  False   \n",
       "102   SMC3-AID-60min-S3-R1-spnA      SMC3   60min        S3  False  False   \n",
       "103   SMC3-AID-90min-S3-R1-spnA      SMC3   90min        S3  False  False   \n",
       "\n",
       "        A  \n",
       "95   True  \n",
       "96   True  \n",
       "97   True  \n",
       "98   True  \n",
       "99   True  \n",
       "100  True  \n",
       "101  True  \n",
       "102  True  \n",
       "103  True  "
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       "      <th>104</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>105</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>106</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>107</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>108</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>109</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>110</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>111</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>112</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>113</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>114</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>115</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>116</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>117</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>118</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>119</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                          lib_name condition   time replicate     S    N/M   A\n",
       "104     SMC3-AID-G2-S4-R1-AA-SPnAA      SMC3     G2        S4  True  False  AA\n",
       "105     SMC3-AID-G2-S4-R1-AN-SPnAa      SMC3     G2        S4  True  False  Aa\n",
       "106     SMC3-AID-G2-S4-R1-NA-SPnaA      SMC3     G2        S4  True  False  aA\n",
       "107     SMC3-AID-G2-S4-R1-NN-SPnaa      SMC3     G2        S4  True  False  aa\n",
       "108   SMC3-AID-5min-S4-R1-AA-SPnAA      SMC3   5min        S4  True  False  AA\n",
       "109   SMC3-AID-5min-S4-R1-AN-SPnAa      SMC3   5min        S4  True  False  Aa\n",
       "110   SMC3-AID-5min-S4-R1-NA-SPnaA      SMC3   5min        S4  True  False  aA\n",
       "111   SMC3-AID-5min-S4-R1-NN-SPnaa      SMC3   5min        S4  True  False  aa\n",
       "112  SMC3-AID-15min-S4-R1-AA-SPnAA      SMC3  15min        S4  True  False  AA\n",
       "113  SMC3-AID-15min-S4-R1-AN-SPnAa      SMC3  15min        S4  True  False  Aa\n",
       "114  SMC3-AID-15min-S4-R1-NA-SPnaA      SMC3  15min        S4  True  False  aA\n",
       "115  SMC3-AID-15min-S4-R1-NN-SPnaa      SMC3  15min        S4  True  False  aa\n",
       "116  SMC3-AID-30min-S4-R1-AA-SPnAA      SMC3  30min        S4  True  False  AA\n",
       "117  SMC3-AID-30min-S4-R1-AN-SPnAa      SMC3  30min        S4  True  False  Aa\n",
       "118  SMC3-AID-30min-S4-R1-NA-SPnaA      SMC3  30min        S4  True  False  aA\n",
       "119  SMC3-AID-30min-S4-R1-NN-SPnaa      SMC3  30min        S4  True  False  aa"
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       "    <tr>\n",
       "      <th>120</th>\n",
       "      <td>SMC3-CAPH-AID-G2-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>G2</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>121</th>\n",
       "      <td>SMC3-CAPH-AID-2.5min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>2.5min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>122</th>\n",
       "      <td>SMC3-CAPH-AID-5min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>123</th>\n",
       "      <td>SMC3-CAPH-AID-7.5min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>124</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>125</th>\n",
       "      <td>SMC3-CAPH-AID-15min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>15min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>126</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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      "text/plain": [
       "                            lib_name  condition    time replicate      S  \\\n",
       "120      SMC3-CAPH-AID-G2-S1-R1-spnA  SMC3-CAPH      G2        S1  False   \n",
       "121  SMC3-CAPH-AID-2.5min-S1-R1-spnA  SMC3-CAPH  2.5min        S1  False   \n",
       "122    SMC3-CAPH-AID-5min-S1-R1-spnA  SMC3-CAPH    5min        S1  False   \n",
       "123  SMC3-CAPH-AID-7.5min-S1-R1-spnA  SMC3-CAPH  7.5min        S1  False   \n",
       "124   SMC3-CAPH-AID-10min-S1-R1-spnA  SMC3-CAPH   10min        S1  False   \n",
       "125   SMC3-CAPH-AID-15min-S1-R1-spnA  SMC3-CAPH   15min        S1  False   \n",
       "126   SMC3-CAPH-AID-30min-S1-R1-spnA  SMC3-CAPH   30min        S1  False   \n",
       "\n",
       "       N/M     A  \n",
       "120  False  True  \n",
       "121  False  True  \n",
       "122  False  True  \n",
       "123  False  True  \n",
       "124  False  True  \n",
       "125  False  True  \n",
       "126  False  True  "
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       "      <th>127</th>\n",
       "      <td>SMC3-CAPH-AID-G2-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>128</th>\n",
       "      <td>SMC3-CAPH-AID-2.5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>2.5min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "      <th>129</th>\n",
       "      <td>SMC3-CAPH-AID-5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S2</td>\n",
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       "      <th>130</th>\n",
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       "      <th>131</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>132</th>\n",
       "      <td>SMC3-CAPH-AID-15min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>133</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                            lib_name  condition    time replicate      S  \\\n",
       "127      SMC3-CAPH-AID-G2-S2-R1-spna  SMC3-CAPH      G2        S2  False   \n",
       "128  SMC3-CAPH-AID-2.5min-S2-R1-spna  SMC3-CAPH  2.5min        S2  False   \n",
       "129    SMC3-CAPH-AID-5min-S2-R1-spna  SMC3-CAPH    5min        S2  False   \n",
       "130  SMC3-CAPH-AID-7.5min-S2-R1-spna  SMC3-CAPH  7.5min        S2  False   \n",
       "131   SMC3-CAPH-AID-10min-S2-R1-spna  SMC3-CAPH   10min        S2  False   \n",
       "132   SMC3-CAPH-AID-15min-S2-R1-spna  SMC3-CAPH   15min        S2  False   \n",
       "133   SMC3-CAPH-AID-30min-S2-R1-spna  SMC3-CAPH   30min        S2  False   \n",
       "\n",
       "       N/M      A  \n",
       "127  False  False  \n",
       "128  False  False  \n",
       "129  False  False  \n",
       "130  False  False  \n",
       "131  False  False  \n",
       "132  False  False  \n",
       "133  False  False  "
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       "      <td>SMC3-CAPH-AID-G2-S3-R2-SpnA</td>\n",
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       "      <th>135</th>\n",
       "      <td>SMC3-CAPH-AID-2.5min-S3-R2-SpnA</td>\n",
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       "      <td>2.5min</td>\n",
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       "      <td>True</td>\n",
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       "      <th>136</th>\n",
       "      <td>SMC3-CAPH-AID-5min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>137</th>\n",
       "      <td>SMC3-CAPH-AID-7.5min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>138</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>139</th>\n",
       "      <td>SMC3-CAPH-AID-15min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>140</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                            lib_name  condition    time replicate     S  \\\n",
       "134      SMC3-CAPH-AID-G2-S3-R2-SpnA  SMC3-CAPH      G2        S3  True   \n",
       "135  SMC3-CAPH-AID-2.5min-S3-R2-SpnA  SMC3-CAPH  2.5min        S3  True   \n",
       "136    SMC3-CAPH-AID-5min-S3-R2-SpnA  SMC3-CAPH    5min        S3  True   \n",
       "137  SMC3-CAPH-AID-7.5min-S3-R2-SpnA  SMC3-CAPH  7.5min        S3  True   \n",
       "138   SMC3-CAPH-AID-10min-S3-R2-SpnA  SMC3-CAPH   10min        S3  True   \n",
       "139   SMC3-CAPH-AID-15min-S3-R2-SpnA  SMC3-CAPH   15min        S3  True   \n",
       "140   SMC3-CAPH-AID-30min-S3-R2-SpnA  SMC3-CAPH   30min        S3  True   \n",
       "\n",
       "       N/M     A  \n",
       "134  False  True  \n",
       "135  False  True  \n",
       "136  False  True  \n",
       "137  False  True  \n",
       "138  False  True  \n",
       "139  False  True  \n",
       "140  False  True  "
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       "      <th>141</th>\n",
       "      <td>SMC3-CAPH2-AID-G2-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "      <th>142</th>\n",
       "      <td>SMC3-CAPH2-AID-2.5min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "      <th>143</th>\n",
       "      <td>SMC3-CAPH2-AID-5min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>5min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>144</th>\n",
       "      <td>SMC3-CAPH2-AID-7.5min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>145</th>\n",
       "      <td>SMC3-CAPH2-AID-10min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>146</th>\n",
       "      <td>SMC3-CAPH2-AID-15min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>15min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>147</th>\n",
       "      <td>SMC3-CAPH2-AID-30min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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      "text/plain": [
       "                             lib_name   condition    time replicate     S  \\\n",
       "141      SMC3-CAPH2-AID-G2-S1-R1-SpnA  SMC3-CAPH2      G2        S1  True   \n",
       "142  SMC3-CAPH2-AID-2.5min-S1-R1-SpnA  SMC3-CAPH2  2.5min        S1  True   \n",
       "143    SMC3-CAPH2-AID-5min-S1-R1-SpnA  SMC3-CAPH2    5min        S1  True   \n",
       "144  SMC3-CAPH2-AID-7.5min-S1-R1-SpnA  SMC3-CAPH2  7.5min        S1  True   \n",
       "145   SMC3-CAPH2-AID-10min-S1-R1-SpnA  SMC3-CAPH2   10min        S1  True   \n",
       "146   SMC3-CAPH2-AID-15min-S1-R1-SpnA  SMC3-CAPH2   15min        S1  True   \n",
       "147   SMC3-CAPH2-AID-30min-S1-R1-SpnA  SMC3-CAPH2   30min        S1  True   \n",
       "\n",
       "       N/M     A  \n",
       "141  False  True  \n",
       "142  False  True  \n",
       "143  False  True  \n",
       "144  False  True  \n",
       "145  False  True  \n",
       "146  False  True  \n",
       "147  False  True  "
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       "      <th>148</th>\n",
       "      <td>SMC3-CAPH2-AID-30min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
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       "      <td>False</td>\n",
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       "      <th>149</th>\n",
       "      <td>SMC3-CAPH2-AID-15min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>2.5min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "      <th>150</th>\n",
       "      <td>SMC3-CAPH2-AID-10min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>5min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "      <th>151</th>\n",
       "      <td>SMC3-CAPH2-AID-7.5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "      <th>152</th>\n",
       "      <td>SMC3-CAPH2-AID-5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>153</th>\n",
       "      <td>SMC3-CAPH2-AID-2.5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>154</th>\n",
       "      <td>SMC3-CAPH2-AID-G2-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                             lib_name   condition    time replicate      S  \\\n",
       "148   SMC3-CAPH2-AID-30min-S2-R1-spna  SMC3-CAPH2      G2        S2  False   \n",
       "149   SMC3-CAPH2-AID-15min-S2-R1-spna  SMC3-CAPH2  2.5min        S2  False   \n",
       "150   SMC3-CAPH2-AID-10min-S2-R1-spna  SMC3-CAPH2    5min        S2  False   \n",
       "151  SMC3-CAPH2-AID-7.5min-S2-R1-spna  SMC3-CAPH2  7.5min        S2  False   \n",
       "152    SMC3-CAPH2-AID-5min-S2-R1-spna  SMC3-CAPH2   10min        S2  False   \n",
       "153  SMC3-CAPH2-AID-2.5min-S2-R1-spna  SMC3-CAPH2   15min        S2  False   \n",
       "154      SMC3-CAPH2-AID-G2-S2-R1-spna  SMC3-CAPH2   30min        S2  False   \n",
       "\n",
       "       N/M      A  \n",
       "148  False  False  \n",
       "149  False  False  \n",
       "150  False  False  \n",
       "151  False  False  \n",
       "152  False  False  \n",
       "153  False  False  \n",
       "154  False  False  "
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       "      <td>SMC3-CAPH2-AID-2.5min-S3-R2-SpnA</td>\n",
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       "      <td>True</td>\n",
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       "      <td>SMC3-CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "      <th>160</th>\n",
       "      <td>SMC3-CAPH2-AID-15min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>15min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>161</th>\n",
       "      <td>SMC3-CAPH2-AID-30min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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      "text/plain": [
       "                             lib_name   condition    time replicate     S  \\\n",
       "155      SMC3-CAPH2-AID-G2-S3-R2-SpnA  SMC3-CAPH2      G2        S3  True   \n",
       "156  SMC3-CAPH2-AID-2.5min-S3-R2-SpnA  SMC3-CAPH2  2.5min        S3  True   \n",
       "157    SMC3-CAPH2-AID-5min-S3-R2-SpnA  SMC3-CAPH2    5min        S3  True   \n",
       "158  SMC3-CAPH2-AID-7.5min-S3-R2-SpnA  SMC3-CAPH2  7.5min        S3  True   \n",
       "159   SMC3-CAPH2-AID-10min-S3-R2-SpnA  SMC3-CAPH2   10min        S3  True   \n",
       "160   SMC3-CAPH2-AID-15min-S3-R2-SpnA  SMC3-CAPH2   15min        S3  True   \n",
       "161   SMC3-CAPH2-AID-30min-S3-R2-SpnA  SMC3-CAPH2   30min        S3  True   \n",
       "\n",
       "       N/M     A  \n",
       "155  False  True  \n",
       "156  False  True  \n",
       "157  False  True  \n",
       "158  False  True  \n",
       "159  False  True  \n",
       "160  False  True  \n",
       "161  False  True  "
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       "      <th>164</th>\n",
       "      <td>SMC3-CAPH2-AID-30min-S4-R3-SpNA</td>\n",
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       "      <td>True</td>\n",
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       "      <th>165</th>\n",
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       "                            lib_name   condition   time replicate     S   N/M  \\\n",
       "162     SMC3-CAPH2-AID-G2-S4-R3-SpNA  SMC3-CAPH2     G2        S4  True  True   \n",
       "163  SMC3-CAPH2-AID-15min-S4-R3-SpNA  SMC3-CAPH2  15min        S4  True  True   \n",
       "164  SMC3-CAPH2-AID-30min-S4-R3-SpNA  SMC3-CAPH2  30min        S4  True  True   \n",
       "165  SMC3-CAPH2-AID-60min-S4-R1-SpNA  SMC3-CAPH2  60min        S4  True  True   \n",
       "\n",
       "        A  \n",
       "162  True  \n",
       "163  True  \n",
       "164  True  \n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "166      SMC3-CTCF-AID-G2-S1-R1-SpnA  SMC3-CTCF      G2        S1  True   \n",
       "167  SMC3-CTCF-AID-2.5min-S1-R1-SpnA  SMC3-CTCF  2.5min        S1  True   \n",
       "168    SMC3-CTCF-AID-5min-S1-R1-SpnA  SMC3-CTCF    5min        S1  True   \n",
       "169  SMC3-CTCF-AID-7.5min-S1-R1-SpnA  SMC3-CTCF  7.5min        S1  True   \n",
       "170   SMC3-CTCF-AID-10min-S1-R1-SpnA  SMC3-CTCF   10min        S1  True   \n",
       "171   SMC3-CTCF-AID-15min-S1-R1-SpnA  SMC3-CTCF   15min        S1  True   \n",
       "172   SMC3-CTCF-AID-30min-S1-R1-SpnA  SMC3-CTCF   30min        S1  True   \n",
       "\n",
       "       N/M     A  \n",
       "166  False  True  \n",
       "167  False  True  \n",
       "168  False  True  \n",
       "169  False  True  \n",
       "170  False  True  \n",
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       "                            lib_name  condition    time replicate      S  \\\n",
       "173      SMC3-CTCF-AID-G2-S2-R1-spna  SMC3-CTCF      G2        S2  False   \n",
       "174  SMC3-CTCF-AID-2.5min-S2-R1-spna  SMC3-CTCF  2.5min        S2  False   \n",
       "175    SMC3-CTCF-AID-5min-S2-R1-spna  SMC3-CTCF    5min        S2  False   \n",
       "176  SMC3-CTCF-AID-7.5min-S2-R1-spna  SMC3-CTCF  7.5min        S2  False   \n",
       "177   SMC3-CTCF-AID-10min-S2-R1-spna  SMC3-CTCF   10min        S2  False   \n",
       "178   SMC3-CTCF-AID-15min-S2-R1-spna  SMC3-CTCF   15min        S2  False   \n",
       "179   SMC3-CTCF-AID-30min-S2-R1-spna  SMC3-CTCF   30min        S2  False   \n",
       "\n",
       "       N/M      A  \n",
       "173  False  False  \n",
       "174  False  False  \n",
       "175  False  False  \n",
       "176  False  False  \n",
       "177  False  False  \n",
       "178  False  False  \n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "180      SMC3-KIF4-AID-G2-S1-R1-SpnA  SMC3-KIF4      G2        S1  True   \n",
       "181  SMC3-KIF4-AID-2.5min-S1-R1-SpnA  SMC3-KIF4  2.5min        S1  True   \n",
       "182    SMC3-KIF4-AID-5min-S1-R1-SpnA  SMC3-KIF4    5min        S1  True   \n",
       "183  SMC3-KIF4-AID-7.5min-S1-R1-SpnA  SMC3-KIF4  7.5min        S1  True   \n",
       "184   SMC3-KIF4-AID-10min-S1-R1-SpnA  SMC3-KIF4   10min        S1  True   \n",
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       "186   SMC3-KIF4-AID-30min-S1-R1-SpnA  SMC3-KIF4   30min        S1  True   \n",
       "\n",
       "       N/M     A  \n",
       "180  False  True  \n",
       "181  False  True  \n",
       "182  False  True  \n",
       "183  False  True  \n",
       "184  False  True  \n",
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       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "187      SMC3-SMC2-AID-G2-S1-R1-SpnA  SMC3-SMC2      G2        S1  True   \n",
       "188  SMC3-SMC2-AID-2.5min-S1-R1-SpnA  SMC3-SMC2  2.5min        S1  True   \n",
       "189    SMC3-SMC2-AID-5min-S1-R1-SpnA  SMC3-SMC2    5min        S1  True   \n",
       "190  SMC3-SMC2-AID-7.5min-S1-R1-SpnA  SMC3-SMC2  7.5min        S1  True   \n",
       "191   SMC3-SMC2-AID-10min-S1-R1-SpnA  SMC3-SMC2   10min        S1  True   \n",
       "192   SMC3-SMC2-AID-15min-S1-R1-SpnA  SMC3-SMC2   15min        S1  True   \n",
       "193   SMC3-SMC2-AID-30min-S1-R1-SpnA  SMC3-SMC2   30min        S1  True   \n",
       "\n",
       "       N/M     A  \n",
       "187  False  True  \n",
       "188  False  True  \n",
       "189  False  True  \n",
       "190  False  True  \n",
       "191  False  True  \n",
       "192  False  True  \n",
       "193  False  True  "
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "194      SMC5-AID-G2-S1-R1-spnA      SMC5      G2        S1  False  False   \n",
       "195  SMC5-AID-2.5min-S1-R1-spnA      SMC5  2.5min        S1  False  False   \n",
       "196    SMC5-AID-5min-S1-R1-spnA      SMC5    5min        S1  False  False   \n",
       "197  SMC5-AID-7.5min-S1-R1-spnA      SMC5  7.5min        S1  False  False   \n",
       "198   SMC5-AID-10min-S1-R1-spnA      SMC5   10min        S1  False  False   \n",
       "199   SMC5-AID-15min-S1-R1-spnA      SMC5   15min        S1  False  False   \n",
       "200   SMC5-AID-30min-S1-R1-spnA      SMC5   30min        S1  False  False   \n",
       "\n",
       "        A  \n",
       "194  True  \n",
       "195  True  \n",
       "196  True  \n",
       "197  True  \n",
       "198  True  \n",
       "199  True  \n",
       "200  True  "
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "201      WAPL-AID-G2-S1-R1-spnA      WAPL      G2        S1  False  False   \n",
       "202  WAPL-AID-2.5min-S1-R1-spnA      WAPL  2.5min        S1  False  False   \n",
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       "205   WAPL-AID-11min-S1-R1-spnA      WAPL   10min        S1  False  False   \n",
       "206   WAPL-AID-15min-S1-R1-spnA      WAPL   15min        S1  False  False   \n",
       "207   WAPL-AID-30min-S1-R1-spnA      WAPL   30min        S1  False  False   \n",
       "\n",
       "        A  \n",
       "201  True  \n",
       "202  True  \n",
       "203  True  \n",
       "204  True  \n",
       "205  True  \n",
       "206  True  \n",
       "207  True  "
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "208      WAPL-AID-G2-S2-R1-spna      WAPL      G2        S2  False  False   \n",
       "209  WAPL-AID-2.5min-S2-R1-spna      WAPL  2.5min        S2  False  False   \n",
       "210    WAPL-AID-5min-S2-R1-spna      WAPL    5min        S2  False  False   \n",
       "211  WAPL-AID-7.5min-S2-R1-spna      WAPL  7.5min        S2  False  False   \n",
       "212   WAPL-AID-11min-S2-R1-spna      WAPL   10min        S2  False  False   \n",
       "213   WAPL-AID-15min-S2-R1-spna      WAPL   15min        S2  False  False   \n",
       "214   WAPL-AID-30min-S2-R1-spna      WAPL   30min        S2  False  False   \n",
       "\n",
       "         A  \n",
       "208  False  \n",
       "209  False  \n",
       "210  False  \n",
       "211  False  \n",
       "212  False  \n",
       "213  False  \n",
       "214  False  "
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       "      <td>True</td>\n",
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       "      <td>WAPL-AID-30min-S3-R2-spnA</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "215      WAPL-AID-G2-S3-R2-spnA      WAPL      G2        S3  False  False   \n",
       "216  WAPL-AID-2.5min-S3-R2-spnA      WAPL  2.5min        S3  False  False   \n",
       "217    WAPL-AID-5min-S3-R2-spnA      WAPL    5min        S3  False  False   \n",
       "218  WAPL-AID-7.5min-S3-R2-spnA      WAPL  7.5min        S3  False  False   \n",
       "219   WAPL-AID-11min-S3-R2-spnA      WAPL   10min        S3  False  False   \n",
       "220   WAPL-AID-15min-S3-R2-spnA      WAPL   15min        S3  False  False   \n",
       "221   WAPL-AID-30min-S3-R2-spnA      WAPL   30min        S3  False  False   \n",
       "\n",
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       "218  True  \n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
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       "223  WAPL-AID-2.5min-S4-R2-spna      WAPL  2.5min        S4  False  False   \n",
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       "\n",
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       "222  False  \n",
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       "224  False  \n",
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       "226  False  \n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "229      WAPL-AID-G2-S5-R3-spnA      WAPL      G2        S5  False  False   \n",
       "230  WAPL-AID-2.5min-S5-R3-spnA      WAPL  2.5min        S5  False  False   \n",
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       "235   WAPL-AID-30min-S5-R3-spnA      WAPL   30min        S5  False  False   \n",
       "\n",
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       "230  True  \n",
       "231  True  \n",
       "232  True  \n",
       "233  True  \n",
       "234  True  \n",
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       "240   WT-10min-S4-R3-spna        WT   10min        S4  False  False  False\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "      <th>250</th>\n",
       "      <td>WT-30min-S5-R5-spna</td>\n",
       "      <td>WT</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "      <td>WT-60min-S5-R4-spMa</td>\n",
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       "      <td>False</td>\n",
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       "      <th>252</th>\n",
       "      <td>WT-90min-S5-R1-spMa</td>\n",
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       "      <td>90min</td>\n",
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       "                 lib_name condition    time replicate      S    N/M      A\n",
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       "243      WT-G2-S5-R7-spnA        WT      G2        S5  False  False   True\n",
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       "246    WT-5min-S5-R4-spna        WT    5min        S5  False  False  False\n",
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       "248   WT-10min-S5-R4-spna        WT   10min        S5  False  False  False\n",
       "249   WT-15min-S5-R4-spna        WT   15min        S5  False  False  False\n",
       "250   WT-30min-S5-R5-spna        WT   30min        S5  False  False  False\n",
       "251   WT-60min-S5-R4-spMa        WT   60min        S5  False   True  False\n",
       "252   WT-90min-S5-R1-spMa        WT   90min        S5  False   True  False"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
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       "<div>\n",
       "<style scoped>\n",
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       "\n",
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       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>253</th>\n",
       "      <td>WT-G2-S6-R9-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>G2</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>254</th>\n",
       "      <td>WT-30min-S6-R6-spNa</td>\n",
       "      <td>WT</td>\n",
       "      <td>30min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                lib_name condition   time replicate      S    N/M      A\n",
       "253     WT-G2-S6-R9-spna        WT     G2        S6  False  False  False\n",
       "254  WT-30min-S6-R6-spNa        WT  30min        S6  False   True  False"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "libname = []\n",
    "condition = []\n",
    "timepoint = []\n",
    "replicate = []\n",
    "is_sorted = []\n",
    "noc = []\n",
    "aux = []\n",
    "\n",
    "isupper = lambda s: s == s.upper()\n",
    "\n",
    "for item in libraries:\n",
    "    if item == 'No_SMC3' or item == 'SMC3':\n",
    "        continue\n",
    "#     print(item)\n",
    "\n",
    "    libname.append(item)\n",
    "\n",
    "    item = item.split('-')\n",
    "    if len(item[-1]) == 5:        \n",
    "        cond = '-'.join(item[0:-6])\n",
    "        time = item[-5]\n",
    "        batch = item[-4]\n",
    "    else:\n",
    "        cond = '-'.join(item[0:-5])\n",
    "        time = item[-4]\n",
    "        batch = item[-3]\n",
    "\n",
    "    if cond == 'AID':\n",
    "        cond = 'KIF4'\n",
    "    if cond == '':\n",
    "        cond = 'WT'\n",
    "    \n",
    "#     print('\\t', cond, time, batch)\n",
    "\n",
    "\n",
    "    condition.append(cond)\n",
    "    timepoint.append(time)\n",
    "    replicate.append(batch)\n",
    "    \n",
    "    treatment = item[-1]\n",
    "    if len(treatment) == 3:\n",
    "        s = np.nan\n",
    "#         p = False\n",
    "        n = False\n",
    "        a = False\n",
    "        \n",
    "    elif len(treatment) == 5:\n",
    "        s = True\n",
    "#         p = True\n",
    "        n = False\n",
    "        a = treatment[-2:]\n",
    "        \n",
    "    else:\n",
    "        s = isupper(treatment[0])\n",
    "#         p = isupper(treatment[2])\n",
    "        n = isupper(treatment[2])\n",
    "        a = isupper(treatment[3])\n",
    "    \n",
    "    is_sorted.append(s)\n",
    "#     palbo.append(p)\n",
    "    noc.append(n)\n",
    "    aux.append(a)\n",
    "\n",
    "\n",
    "df = pd.DataFrame({'lib_name':libname,\n",
    "                   'condition':condition,\n",
    "                   'time':timepoint,\n",
    "                   'replicate':replicate,\n",
    "                   'S':is_sorted,\n",
    "                   'N/M':noc,\n",
    "                   'A':aux\n",
    "                  })\n",
    "\n",
    "df.loc[(df['condition']=='WAPL') & (df['time']=='11min'),'time'] = '10min'\n",
    "\n",
    "cat_type = CategoricalDtype(categories=['G2', '2.5min', '5min','7.5min',\n",
    "                                        '10min','15min','30min','45min',\n",
    "                                        '60min', '75min','90min'], ordered=True\n",
    "                           )\n",
    "df['time'] = df['time'].astype(cat_type)\n",
    "df = df.sort_values(['condition','replicate','time']).reset_index(drop=True)\n",
    "\n",
    "\n",
    "caph_mask = (df['condition']=='CAPH')\n",
    "t5_mask = caph_mask & (df['time']=='5min')\n",
    "t75_mask = caph_mask & (df['time']=='7.5min')\n",
    "df.loc[t5_mask,'time'] = '7.5min'\n",
    "df.loc[t75_mask,'time'] = '5min'\n",
    "\n",
    "\n",
    "smc2_mask = (df['condition']=='SMC2') & (df['replicate']=='S4')\n",
    "t75_mask = smc2_mask & (df['time']=='7.5min')\n",
    "df.drop(df.loc[t75_mask].index.values, inplace=True)\n",
    "\n",
    "t10_mask = smc2_mask & (df['time']=='10min')\n",
    "t15_mask = smc2_mask & (df['time']=='15min')\n",
    "df.loc[t15_mask,'time'] = '10min'\n",
    "df.loc[t10_mask,'time'] = '15min'\n",
    "\n",
    "\n",
    "\n",
    "smc3caph2s2_mask = (df['condition']=='SMC3-CAPH2') & (df['replicate']=='S2')\n",
    "df.loc[smc3caph2s2_mask, 'time'] = df.loc[smc3caph2s2_mask, 'time'].values[::-1]\n",
    "\n",
    "df = df.sort_values(['condition','replicate','time']).reset_index(drop=True)\n",
    "\n",
    "for _, group in df.groupby(['condition','replicate']):\n",
    "    display(group)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Assigning preferred repicates for downstream analysis"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-12-15T18:18:43.453880Z",
     "start_time": "2022-12-15T18:18:43.028782Z"
    }
   },
   "outputs": [
    {
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       "\n",
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       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>CAPH-AID-G2-S3-R5-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>CAPH-AID-2.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>CAPH-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>CAPH-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>CAPH-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>5</th>\n",
       "      <td>CAPH-AID-15min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>6</th>\n",
       "      <td>CAPH-AID-30min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                     lib_name condition    time replicate      S    N/M     A  \\\n",
       "0      CAPH-AID-G2-S3-R5-spnA      CAPH      G2        S3  False  False  True   \n",
       "1  CAPH-AID-2.5min-S3-R3-spnA      CAPH  2.5min        S3  False  False  True   \n",
       "2  CAPH-AID-7.5min-S3-R3-spnA      CAPH    5min        S3  False  False  True   \n",
       "3    CAPH-AID-5min-S3-R3-spnA      CAPH  7.5min        S3  False  False  True   \n",
       "4   CAPH-AID-10min-S3-R3-spnA      CAPH   10min        S3  False  False  True   \n",
       "5   CAPH-AID-15min-S3-R3-spnA      CAPH   15min        S3  False  False  True   \n",
       "6   CAPH-AID-30min-S3-R3-spnA      CAPH   30min        S3  False  False  True   \n",
       "\n",
       "   preferred  \n",
       "0       True  \n",
       "1       True  \n",
       "2       True  \n",
       "3       True  \n",
       "4       True  \n",
       "5       True  \n",
       "6       True  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
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       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>7</th>\n",
       "      <td>CAPH2-AID-G2-S3-R5-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>8</th>\n",
       "      <td>CAPH2-AID-2.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>9</th>\n",
       "      <td>CAPH2-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>10</th>\n",
       "      <td>CAPH2-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>11</th>\n",
       "      <td>CAPH2-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>12</th>\n",
       "      <td>CAPH2-AID-15min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>13</th>\n",
       "      <td>CAPH2-AID-30min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "7       CAPH2-AID-G2-S3-R5-spnA     CAPH2      G2        S3  False  False   \n",
       "8   CAPH2-AID-2.5min-S3-R3-spnA     CAPH2  2.5min        S3  False  False   \n",
       "9     CAPH2-AID-5min-S3-R3-spnA     CAPH2    5min        S3  False  False   \n",
       "10  CAPH2-AID-7.5min-S3-R3-spnA     CAPH2  7.5min        S3  False  False   \n",
       "11   CAPH2-AID-10min-S3-R3-spnA     CAPH2   10min        S3  False  False   \n",
       "12   CAPH2-AID-15min-S3-R3-spnA     CAPH2   15min        S3  False  False   \n",
       "13   CAPH2-AID-30min-S3-R3-spnA     CAPH2   30min        S3  False  False   \n",
       "\n",
       "       A  preferred  \n",
       "7   True       True  \n",
       "8   True       True  \n",
       "9   True       True  \n",
       "10  True       True  \n",
       "11  True       True  \n",
       "12  True       True  \n",
       "13  True       True  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
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       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
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       "      <th>preferred</th>\n",
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       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>14</th>\n",
       "      <td>CAPH2-AID-G2-S4-R6-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>CAPH2-AID-5min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>CAPH2-AID-10min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>CAPH2-AID-15min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>18</th>\n",
       "      <td>CAPH2-AID-15min-S4-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>19</th>\n",
       "      <td>CAPH2-AID-15min-S4-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>20</th>\n",
       "      <td>CAPH2-AID-30min-S4-R4-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>21</th>\n",
       "      <td>CAPH2-AID-30min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>22</th>\n",
       "      <td>CAPH2-AID-30min-S4-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>23</th>\n",
       "      <td>CAPH2-AID-30min-S4-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>24</th>\n",
       "      <td>CAPH2-AID-30min-S4-R8-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                      lib_name condition   time replicate      S    N/M  \\\n",
       "14     CAPH2-AID-G2-S4-R6-spnA     CAPH2     G2        S4  False  False   \n",
       "15   CAPH2-AID-5min-S4-R4-spnA     CAPH2   5min        S4  False  False   \n",
       "16  CAPH2-AID-10min-S4-R4-spnA     CAPH2  10min        S4  False  False   \n",
       "17  CAPH2-AID-15min-S4-R4-spnA     CAPH2  15min        S4  False  False   \n",
       "18  CAPH2-AID-15min-S4-R5-spNA     CAPH2  15min        S4  False   True   \n",
       "19  CAPH2-AID-15min-S4-R6-spNA     CAPH2  15min        S4  False   True   \n",
       "20  CAPH2-AID-30min-S4-R4-spNa     CAPH2  30min        S4  False   True   \n",
       "21  CAPH2-AID-30min-S4-R4-spnA     CAPH2  30min        S4  False  False   \n",
       "22  CAPH2-AID-30min-S4-R5-spNA     CAPH2  30min        S4  False   True   \n",
       "23  CAPH2-AID-30min-S4-R6-spNA     CAPH2  30min        S4  False   True   \n",
       "24  CAPH2-AID-30min-S4-R8-spNa     CAPH2  30min        S4  False   True   \n",
       "\n",
       "        A  preferred  \n",
       "14   True      False  \n",
       "15   True      False  \n",
       "16   True      False  \n",
       "17   True      False  \n",
       "18   True      False  \n",
       "19   True      False  \n",
       "20  False      False  \n",
       "21   True      False  \n",
       "22   True      False  \n",
       "23   True      False  \n",
       "24  False      False  "
      ]
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       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
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       "    <tr>\n",
       "      <th>25</th>\n",
       "      <td>CAPH2-AID-G2-S5-R7-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>26</th>\n",
       "      <td>CAPH2-AID-10min-S5-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>27</th>\n",
       "      <td>CAPH2-AID-15min-S5-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>28</th>\n",
       "      <td>CAPH2-AID-30min-S5-R9-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>29</th>\n",
       "      <td>CAPH2-AID-60min-S5-R3-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                      lib_name condition   time replicate      S   N/M     A  \\\n",
       "25     CAPH2-AID-G2-S5-R7-spNA     CAPH2     G2        S5  False  True  True   \n",
       "26  CAPH2-AID-10min-S5-R5-spNA     CAPH2  10min        S5  False  True  True   \n",
       "27  CAPH2-AID-15min-S5-R6-spNA     CAPH2  15min        S5  False  True  True   \n",
       "28  CAPH2-AID-30min-S5-R9-spNA     CAPH2  30min        S5  False  True  True   \n",
       "29  CAPH2-AID-60min-S5-R3-spNA     CAPH2  60min        S5  False  True  True   \n",
       "\n",
       "    preferred  \n",
       "25      False  \n",
       "26      False  \n",
       "27      False  \n",
       "28      False  \n",
       "29      False  "
      ]
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       "  <tbody>\n",
       "    <tr>\n",
       "      <th>30</th>\n",
       "      <td>CAPH2-AID-G2-S6-R8-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>31</th>\n",
       "      <td>CAPH2-AID-10min-S6-R6-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>32</th>\n",
       "      <td>CAPH2-AID-15min-S6-R7-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>33</th>\n",
       "      <td>CAPH2-AID-30min-S6-R10-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>34</th>\n",
       "      <td>CAPH2-AID-60min-S6-R3-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "                       lib_name condition   time replicate      S   N/M  \\\n",
       "30      CAPH2-AID-G2-S6-R8-spNa     CAPH2     G2        S6  False  True   \n",
       "31   CAPH2-AID-10min-S6-R6-spNa     CAPH2  10min        S6  False  True   \n",
       "32   CAPH2-AID-15min-S6-R7-spNa     CAPH2  15min        S6  False  True   \n",
       "33  CAPH2-AID-30min-S6-R10-spNa     CAPH2  30min        S6  False  True   \n",
       "34   CAPH2-AID-60min-S6-R3-spNa     CAPH2  60min        S6  False  True   \n",
       "\n",
       "        A  preferred  \n",
       "30  False      False  \n",
       "31  False      False  \n",
       "32  False      False  \n",
       "33  False      False  \n",
       "34  False      False  "
      ]
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       "  <tbody>\n",
       "    <tr>\n",
       "      <th>35</th>\n",
       "      <td>CAPH2-AID-G2-S7-R9-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>36</th>\n",
       "      <td>CAPH2-AID-15min-S7-R8-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>37</th>\n",
       "      <td>CAPH2-AID-30min-S7-R11-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S7</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>38</th>\n",
       "      <td>CAPH2-AID-60min-S7-R4-SpNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
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       "      <td>True</td>\n",
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       "      <td>False</td>\n",
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       "                       lib_name condition   time replicate     S   N/M     A  \\\n",
       "35      CAPH2-AID-G2-S7-R9-SpNA     CAPH2     G2        S7  True  True  True   \n",
       "36   CAPH2-AID-15min-S7-R8-SpNA     CAPH2  15min        S7  True  True  True   \n",
       "37  CAPH2-AID-30min-S7-R11-SpNA     CAPH2  30min        S7  True  True  True   \n",
       "38   CAPH2-AID-60min-S7-R4-SpNA     CAPH2  60min        S7  True  True  True   \n",
       "\n",
       "    preferred  \n",
       "35      False  \n",
       "36      False  \n",
       "37      False  \n",
       "38      False  "
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       "    <tr>\n",
       "      <th>39</th>\n",
       "      <td>CTCF-AID-G2-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>G2</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>40</th>\n",
       "      <td>CTCF-AID-2.5min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
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       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>41</th>\n",
       "      <td>CTCF-AID-5min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>42</th>\n",
       "      <td>CTCF-AID-7.5min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>43</th>\n",
       "      <td>CTCF-AID-10min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>44</th>\n",
       "      <td>CTCF-AID-15min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>15min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>45</th>\n",
       "      <td>CTCF-AID-30min-S1-R1-SpnA</td>\n",
       "      <td>CTCF</td>\n",
       "      <td>30min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                      lib_name condition    time replicate     S    N/M     A  \\\n",
       "39      CTCF-AID-G2-S1-R1-SpnA      CTCF      G2        S1  True  False  True   \n",
       "40  CTCF-AID-2.5min-S1-R1-SpnA      CTCF  2.5min        S1  True  False  True   \n",
       "41    CTCF-AID-5min-S1-R1-SpnA      CTCF    5min        S1  True  False  True   \n",
       "42  CTCF-AID-7.5min-S1-R1-SpnA      CTCF  7.5min        S1  True  False  True   \n",
       "43   CTCF-AID-10min-S1-R1-SpnA      CTCF   10min        S1  True  False  True   \n",
       "44   CTCF-AID-15min-S1-R1-SpnA      CTCF   15min        S1  True  False  True   \n",
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       "                     lib_name condition    time replicate    S    N/M      A  \\\n",
       "46      AID-KIF4-G2-S3-R5-pna      KIF4      G2        S3  NaN  False  False   \n",
       "47      AID-KIF4-G2-S3-R6-pna      KIF4      G2        S3  NaN  False  False   \n",
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       "49    AID-KIF4-5min-S3-R1-pna      KIF4    5min        S3  NaN  False  False   \n",
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       "\n",
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       "                      lib_name condition    time replicate      S    N/M  \\\n",
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       "\n",
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       "                      lib_name condition    time replicate      S   N/M     A  \\\n",
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       "\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>72</th>\n",
       "      <td>SMC2-WAPL-AID-10min-S1-R1-spnA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>73</th>\n",
       "      <td>SMC2-WAPL-AID-15min-S1-R1-spnA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>15min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>74</th>\n",
       "      <td>SMC2-WAPL-AID-30min-S1-R1-spnA</td>\n",
       "      <td>SMC2-WAPL</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
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       "                           lib_name  condition    time replicate      S  \\\n",
       "68      SMC2-WAPL-AID-G2-S1-R1-spnA  SMC2-WAPL      G2        S1  False   \n",
       "69  SMC2-WAPL-AID-2.5min-S1-R1-spnA  SMC2-WAPL  2.5min        S1  False   \n",
       "70    SMC2-WAPL-AID-5min-S1-R1-spnA  SMC2-WAPL    5min        S1  False   \n",
       "71  SMC2-WAPL-AID-7.5min-S1-R1-spnA  SMC2-WAPL  7.5min        S1  False   \n",
       "72   SMC2-WAPL-AID-10min-S1-R1-spnA  SMC2-WAPL   10min        S1  False   \n",
       "73   SMC2-WAPL-AID-15min-S1-R1-spnA  SMC2-WAPL   15min        S1  False   \n",
       "74   SMC2-WAPL-AID-30min-S1-R1-spnA  SMC2-WAPL   30min        S1  False   \n",
       "\n",
       "      N/M     A  preferred  \n",
       "68  False  True      False  \n",
       "69  False  True      False  \n",
       "70  False  True      False  \n",
       "71  False  True      False  \n",
       "72  False  True      False  \n",
       "73  False  True      False  \n",
       "74  False  True      False  "
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       "      <th>75</th>\n",
       "      <td>SMC2-WAPL-AID-G2-S2-R1-spNA</td>\n",
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       "      <td>SMC2-WAPL-AID-2.5min-S2-R1-spNA</td>\n",
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       "      <td>SMC2-WAPL-AID-7.5min-S2-R1-spNA</td>\n",
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       "      <td>True</td>\n",
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       "      <td>True</td>\n",
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       "      <td>SMC2-WAPL-AID-15min-S2-R1-spNA</td>\n",
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       "      <td>SMC2-WAPL-AID-30min-S2-R1-spNA</td>\n",
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       "                           lib_name  condition    time replicate      S   N/M  \\\n",
       "75      SMC2-WAPL-AID-G2-S2-R1-spNA  SMC2-WAPL      G2        S2  False  True   \n",
       "76  SMC2-WAPL-AID-2.5min-S2-R1-spNA  SMC2-WAPL  2.5min        S2  False  True   \n",
       "77  SMC2-WAPL-AID-7.5min-S2-R1-spNA  SMC2-WAPL  7.5min        S2  False  True   \n",
       "78   SMC2-WAPL-AID-10min-S2-R1-spNA  SMC2-WAPL   10min        S2  False  True   \n",
       "79   SMC2-WAPL-AID-15min-S2-R1-spNA  SMC2-WAPL   15min        S2  False  True   \n",
       "80   SMC2-WAPL-AID-30min-S2-R1-spNA  SMC2-WAPL   30min        S2  False  True   \n",
       "\n",
       "       A  preferred  \n",
       "75  True       True  \n",
       "76  True       True  \n",
       "77  True       True  \n",
       "78  True       True  \n",
       "79  True       True  \n",
       "80  True       True  "
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       "      <th>82</th>\n",
       "      <td>SMC3-AID-2.5min-S1-R1-spna</td>\n",
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       "      <td>2.5min</td>\n",
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       "      <th>83</th>\n",
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       "      <th>87</th>\n",
       "      <td>SMC3-AID-30min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "                      lib_name condition    time replicate      S    N/M  \\\n",
       "81      SMC3-AID-G2-S1-R1-spna      SMC3      G2        S1  False  False   \n",
       "82  SMC3-AID-2.5min-S1-R1-spna      SMC3  2.5min        S1  False  False   \n",
       "83    SMC3-AID-5min-S1-R1-spna      SMC3    5min        S1  False  False   \n",
       "84  SMC3-AID-7.5min-S1-R1-spna      SMC3  7.5min        S1  False  False   \n",
       "85   SMC3-AID-10min-S1-R1-spna      SMC3   10min        S1  False  False   \n",
       "86   SMC3-AID-15min-S1-R1-spna      SMC3   15min        S1  False  False   \n",
       "87   SMC3-AID-30min-S1-R1-spna      SMC3   30min        S1  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "81  False       True  \n",
       "82  False       True  \n",
       "83  False       True  \n",
       "84  False       True  \n",
       "85  False       True  \n",
       "86  False       True  \n",
       "87  False       True  "
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       "      <td>True</td>\n",
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       "      <th>94</th>\n",
       "      <td>SMC3-AID-30min-S2-R2-SpnA</td>\n",
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       "                      lib_name condition    time replicate     S    N/M     A  \\\n",
       "88      SMC3-AID-G2-S2-R2-SpnA      SMC3      G2        S2  True  False  True   \n",
       "89  SMC3-AID-2.5min-S2-R2-SpnA      SMC3  2.5min        S2  True  False  True   \n",
       "90    SMC3-AID-5min-S2-R2-SpnA      SMC3    5min        S2  True  False  True   \n",
       "91  SMC3-AID-7.5min-S2-R2-SpnA      SMC3  7.5min        S2  True  False  True   \n",
       "92   SMC3-AID-10min-S2-R2-SpnA      SMC3   10min        S2  True  False  True   \n",
       "93   SMC3-AID-15min-S2-R2-SpnA      SMC3   15min        S2  True  False  True   \n",
       "94   SMC3-AID-30min-S2-R2-SpnA      SMC3   30min        S2  True  False  True   \n",
       "\n",
       "    preferred  \n",
       "88       True  \n",
       "89       True  \n",
       "90       True  \n",
       "91       True  \n",
       "92       True  \n",
       "93       True  \n",
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       "    <tr>\n",
       "      <th>98</th>\n",
       "      <td>SMC3-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>99</th>\n",
       "      <td>SMC3-AID-10min-S3-R3-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>100</th>\n",
       "      <td>SMC3-AID-15min-S3-R3-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>101</th>\n",
       "      <td>SMC3-AID-30min-S3-R3-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>102</th>\n",
       "      <td>SMC3-AID-60min-S3-R1-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>60min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>103</th>\n",
       "      <td>SMC3-AID-90min-S3-R1-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>90min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "95       SMC3-AID-G2-S3-R3-spnA      SMC3      G2        S3  False  False   \n",
       "96   SMC3-AID-2.5min-S3-R3-spnA      SMC3  2.5min        S3  False  False   \n",
       "97     SMC3-AID-5min-S3-R3-spnA      SMC3    5min        S3  False  False   \n",
       "98   SMC3-AID-7.5min-S3-R3-spnA      SMC3  7.5min        S3  False  False   \n",
       "99    SMC3-AID-10min-S3-R3-spnA      SMC3   10min        S3  False  False   \n",
       "100   SMC3-AID-15min-S3-R3-spnA      SMC3   15min        S3  False  False   \n",
       "101   SMC3-AID-30min-S3-R3-spnA      SMC3   30min        S3  False  False   \n",
       "102   SMC3-AID-60min-S3-R1-spnA      SMC3   60min        S3  False  False   \n",
       "103   SMC3-AID-90min-S3-R1-spnA      SMC3   90min        S3  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "95   True      False  \n",
       "96   True      False  \n",
       "97   True      False  \n",
       "98   True      False  \n",
       "99   True      False  \n",
       "100  True      False  \n",
       "101  True      False  \n",
       "102  True      False  \n",
       "103  True      False  "
      ]
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       "      <th>104</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>105</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>106</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>107</th>\n",
       "      <td>SMC3-AID-G2-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>108</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>109</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
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       "      <th>110</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>111</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>112</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>113</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>114</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>115</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>116</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>117</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "      <td>True</td>\n",
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       "      <th>118</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-NA-SPnaA</td>\n",
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       "      <td>30min</td>\n",
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       "      <td>True</td>\n",
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       "      <td>SMC3-AID-30min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "      <td>True</td>\n",
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      "text/plain": [
       "                          lib_name condition   time replicate     S    N/M  \\\n",
       "104     SMC3-AID-G2-S4-R1-AA-SPnAA      SMC3     G2        S4  True  False   \n",
       "105     SMC3-AID-G2-S4-R1-AN-SPnAa      SMC3     G2        S4  True  False   \n",
       "106     SMC3-AID-G2-S4-R1-NA-SPnaA      SMC3     G2        S4  True  False   \n",
       "107     SMC3-AID-G2-S4-R1-NN-SPnaa      SMC3     G2        S4  True  False   \n",
       "108   SMC3-AID-5min-S4-R1-AA-SPnAA      SMC3   5min        S4  True  False   \n",
       "109   SMC3-AID-5min-S4-R1-AN-SPnAa      SMC3   5min        S4  True  False   \n",
       "110   SMC3-AID-5min-S4-R1-NA-SPnaA      SMC3   5min        S4  True  False   \n",
       "111   SMC3-AID-5min-S4-R1-NN-SPnaa      SMC3   5min        S4  True  False   \n",
       "112  SMC3-AID-15min-S4-R1-AA-SPnAA      SMC3  15min        S4  True  False   \n",
       "113  SMC3-AID-15min-S4-R1-AN-SPnAa      SMC3  15min        S4  True  False   \n",
       "114  SMC3-AID-15min-S4-R1-NA-SPnaA      SMC3  15min        S4  True  False   \n",
       "115  SMC3-AID-15min-S4-R1-NN-SPnaa      SMC3  15min        S4  True  False   \n",
       "116  SMC3-AID-30min-S4-R1-AA-SPnAA      SMC3  30min        S4  True  False   \n",
       "117  SMC3-AID-30min-S4-R1-AN-SPnAa      SMC3  30min        S4  True  False   \n",
       "118  SMC3-AID-30min-S4-R1-NA-SPnaA      SMC3  30min        S4  True  False   \n",
       "119  SMC3-AID-30min-S4-R1-NN-SPnaa      SMC3  30min        S4  True  False   \n",
       "\n",
       "      A  preferred  \n",
       "104  AA       True  \n",
       "105  Aa       True  \n",
       "106  aA       True  \n",
       "107  aa       True  \n",
       "108  AA       True  \n",
       "109  Aa       True  \n",
       "110  aA       True  \n",
       "111  aa       True  \n",
       "112  AA       True  \n",
       "113  Aa       True  \n",
       "114  aA       True  \n",
       "115  aa       True  \n",
       "116  AA       True  \n",
       "117  Aa       True  \n",
       "118  aA       True  \n",
       "119  aa       True  "
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       "      <td>SMC3-CAPH-AID-G2-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>G2</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "      <th>121</th>\n",
       "      <td>SMC3-CAPH-AID-2.5min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>122</th>\n",
       "      <td>SMC3-CAPH-AID-5min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "      <th>123</th>\n",
       "      <td>SMC3-CAPH-AID-7.5min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>124</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>10min</td>\n",
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       "      <td>False</td>\n",
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       "      <td>SMC3-CAPH-AID-15min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>15min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>126</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                            lib_name  condition    time replicate      S  \\\n",
       "120      SMC3-CAPH-AID-G2-S1-R1-spnA  SMC3-CAPH      G2        S1  False   \n",
       "121  SMC3-CAPH-AID-2.5min-S1-R1-spnA  SMC3-CAPH  2.5min        S1  False   \n",
       "122    SMC3-CAPH-AID-5min-S1-R1-spnA  SMC3-CAPH    5min        S1  False   \n",
       "123  SMC3-CAPH-AID-7.5min-S1-R1-spnA  SMC3-CAPH  7.5min        S1  False   \n",
       "124   SMC3-CAPH-AID-10min-S1-R1-spnA  SMC3-CAPH   10min        S1  False   \n",
       "125   SMC3-CAPH-AID-15min-S1-R1-spnA  SMC3-CAPH   15min        S1  False   \n",
       "126   SMC3-CAPH-AID-30min-S1-R1-spnA  SMC3-CAPH   30min        S1  False   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "120  False  True      False  \n",
       "121  False  True      False  \n",
       "122  False  True      False  \n",
       "123  False  True      False  \n",
       "124  False  True      False  \n",
       "125  False  True      False  \n",
       "126  False  True      False  "
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       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>127</th>\n",
       "      <td>SMC3-CAPH-AID-G2-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>G2</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>128</th>\n",
       "      <td>SMC3-CAPH-AID-2.5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>129</th>\n",
       "      <td>SMC3-CAPH-AID-5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>130</th>\n",
       "      <td>SMC3-CAPH-AID-7.5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>131</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>132</th>\n",
       "      <td>SMC3-CAPH-AID-15min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>133</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                            lib_name  condition    time replicate      S  \\\n",
       "127      SMC3-CAPH-AID-G2-S2-R1-spna  SMC3-CAPH      G2        S2  False   \n",
       "128  SMC3-CAPH-AID-2.5min-S2-R1-spna  SMC3-CAPH  2.5min        S2  False   \n",
       "129    SMC3-CAPH-AID-5min-S2-R1-spna  SMC3-CAPH    5min        S2  False   \n",
       "130  SMC3-CAPH-AID-7.5min-S2-R1-spna  SMC3-CAPH  7.5min        S2  False   \n",
       "131   SMC3-CAPH-AID-10min-S2-R1-spna  SMC3-CAPH   10min        S2  False   \n",
       "132   SMC3-CAPH-AID-15min-S2-R1-spna  SMC3-CAPH   15min        S2  False   \n",
       "133   SMC3-CAPH-AID-30min-S2-R1-spna  SMC3-CAPH   30min        S2  False   \n",
       "\n",
       "       N/M      A  preferred  \n",
       "127  False  False       True  \n",
       "128  False  False       True  \n",
       "129  False  False       True  \n",
       "130  False  False       True  \n",
       "131  False  False       True  \n",
       "132  False  False       True  \n",
       "133  False  False       True  "
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       "      <th>134</th>\n",
       "      <td>SMC3-CAPH-AID-G2-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>135</th>\n",
       "      <td>SMC3-CAPH-AID-2.5min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
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       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>136</th>\n",
       "      <td>SMC3-CAPH-AID-5min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
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       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>137</th>\n",
       "      <td>SMC3-CAPH-AID-7.5min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>138</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>139</th>\n",
       "      <td>SMC3-CAPH-AID-15min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>140</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
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      "text/plain": [
       "                            lib_name  condition    time replicate     S  \\\n",
       "134      SMC3-CAPH-AID-G2-S3-R2-SpnA  SMC3-CAPH      G2        S3  True   \n",
       "135  SMC3-CAPH-AID-2.5min-S3-R2-SpnA  SMC3-CAPH  2.5min        S3  True   \n",
       "136    SMC3-CAPH-AID-5min-S3-R2-SpnA  SMC3-CAPH    5min        S3  True   \n",
       "137  SMC3-CAPH-AID-7.5min-S3-R2-SpnA  SMC3-CAPH  7.5min        S3  True   \n",
       "138   SMC3-CAPH-AID-10min-S3-R2-SpnA  SMC3-CAPH   10min        S3  True   \n",
       "139   SMC3-CAPH-AID-15min-S3-R2-SpnA  SMC3-CAPH   15min        S3  True   \n",
       "140   SMC3-CAPH-AID-30min-S3-R2-SpnA  SMC3-CAPH   30min        S3  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "134  False  True       True  \n",
       "135  False  True       True  \n",
       "136  False  True       True  \n",
       "137  False  True       True  \n",
       "138  False  True       True  \n",
       "139  False  True       True  \n",
       "140  False  True       True  "
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       "      <th>141</th>\n",
       "      <td>SMC3-CAPH2-AID-G2-S1-R1-SpnA</td>\n",
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       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>142</th>\n",
       "      <td>SMC3-CAPH2-AID-2.5min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
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       "      <th>143</th>\n",
       "      <td>SMC3-CAPH2-AID-5min-S1-R1-SpnA</td>\n",
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       "      <td>5min</td>\n",
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       "      <th>144</th>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>145</th>\n",
       "      <td>SMC3-CAPH2-AID-10min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>146</th>\n",
       "      <td>SMC3-CAPH2-AID-15min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S1</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>147</th>\n",
       "      <td>SMC3-CAPH2-AID-30min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
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      ],
      "text/plain": [
       "                             lib_name   condition    time replicate     S  \\\n",
       "141      SMC3-CAPH2-AID-G2-S1-R1-SpnA  SMC3-CAPH2      G2        S1  True   \n",
       "142  SMC3-CAPH2-AID-2.5min-S1-R1-SpnA  SMC3-CAPH2  2.5min        S1  True   \n",
       "143    SMC3-CAPH2-AID-5min-S1-R1-SpnA  SMC3-CAPH2    5min        S1  True   \n",
       "144  SMC3-CAPH2-AID-7.5min-S1-R1-SpnA  SMC3-CAPH2  7.5min        S1  True   \n",
       "145   SMC3-CAPH2-AID-10min-S1-R1-SpnA  SMC3-CAPH2   10min        S1  True   \n",
       "146   SMC3-CAPH2-AID-15min-S1-R1-SpnA  SMC3-CAPH2   15min        S1  True   \n",
       "147   SMC3-CAPH2-AID-30min-S1-R1-SpnA  SMC3-CAPH2   30min        S1  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "141  False  True      False  \n",
       "142  False  True      False  \n",
       "143  False  True      False  \n",
       "144  False  True      False  \n",
       "145  False  True      False  \n",
       "146  False  True      False  \n",
       "147  False  True      False  "
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       "      <th>148</th>\n",
       "      <td>SMC3-CAPH2-AID-30min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>G2</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>149</th>\n",
       "      <td>SMC3-CAPH2-AID-15min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>150</th>\n",
       "      <td>SMC3-CAPH2-AID-10min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "      <th>151</th>\n",
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       "      <td>SMC3-CAPH2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>152</th>\n",
       "      <td>SMC3-CAPH2-AID-5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>153</th>\n",
       "      <td>SMC3-CAPH2-AID-2.5min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>154</th>\n",
       "      <td>SMC3-CAPH2-AID-G2-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S2</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
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      ],
      "text/plain": [
       "                             lib_name   condition    time replicate      S  \\\n",
       "148   SMC3-CAPH2-AID-30min-S2-R1-spna  SMC3-CAPH2      G2        S2  False   \n",
       "149   SMC3-CAPH2-AID-15min-S2-R1-spna  SMC3-CAPH2  2.5min        S2  False   \n",
       "150   SMC3-CAPH2-AID-10min-S2-R1-spna  SMC3-CAPH2    5min        S2  False   \n",
       "151  SMC3-CAPH2-AID-7.5min-S2-R1-spna  SMC3-CAPH2  7.5min        S2  False   \n",
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       "\n",
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       "148  False  False       True  \n",
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       "151  False  False       True  \n",
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       "\n",
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       "                            lib_name   condition   time replicate     S   N/M  \\\n",
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       "\n",
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       "                            lib_name  condition    time replicate     S  \\\n",
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       "\n",
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       "                            lib_name  condition    time replicate      S  \\\n",
       "173      SMC3-CTCF-AID-G2-S2-R1-spna  SMC3-CTCF      G2        S2  False   \n",
       "174  SMC3-CTCF-AID-2.5min-S2-R1-spna  SMC3-CTCF  2.5min        S2  False   \n",
       "175    SMC3-CTCF-AID-5min-S2-R1-spna  SMC3-CTCF    5min        S2  False   \n",
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       "177   SMC3-CTCF-AID-10min-S2-R1-spna  SMC3-CTCF   10min        S2  False   \n",
       "178   SMC3-CTCF-AID-15min-S2-R1-spna  SMC3-CTCF   15min        S2  False   \n",
       "179   SMC3-CTCF-AID-30min-S2-R1-spna  SMC3-CTCF   30min        S2  False   \n",
       "\n",
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       "174  False  False       True  \n",
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       "177  False  False       True  \n",
       "178  False  False       True  \n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "180      SMC3-KIF4-AID-G2-S1-R1-SpnA  SMC3-KIF4      G2        S1  True   \n",
       "181  SMC3-KIF4-AID-2.5min-S1-R1-SpnA  SMC3-KIF4  2.5min        S1  True   \n",
       "182    SMC3-KIF4-AID-5min-S1-R1-SpnA  SMC3-KIF4    5min        S1  True   \n",
       "183  SMC3-KIF4-AID-7.5min-S1-R1-SpnA  SMC3-KIF4  7.5min        S1  True   \n",
       "184   SMC3-KIF4-AID-10min-S1-R1-SpnA  SMC3-KIF4   10min        S1  True   \n",
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       "186   SMC3-KIF4-AID-30min-S1-R1-SpnA  SMC3-KIF4   30min        S1  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "180  False  True       True  \n",
       "181  False  True       True  \n",
       "182  False  True       True  \n",
       "183  False  True       True  \n",
       "184  False  True       True  \n",
       "185  False  True       True  \n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "187      SMC3-SMC2-AID-G2-S1-R1-SpnA  SMC3-SMC2      G2        S1  True   \n",
       "188  SMC3-SMC2-AID-2.5min-S1-R1-SpnA  SMC3-SMC2  2.5min        S1  True   \n",
       "189    SMC3-SMC2-AID-5min-S1-R1-SpnA  SMC3-SMC2    5min        S1  True   \n",
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       "193   SMC3-SMC2-AID-30min-S1-R1-SpnA  SMC3-SMC2   30min        S1  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "187  False  True       True  \n",
       "188  False  True       True  \n",
       "189  False  True       True  \n",
       "190  False  True       True  \n",
       "191  False  True       True  \n",
       "192  False  True       True  \n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "194      SMC5-AID-G2-S1-R1-spnA      SMC5      G2        S1  False  False   \n",
       "195  SMC5-AID-2.5min-S1-R1-spnA      SMC5  2.5min        S1  False  False   \n",
       "196    SMC5-AID-5min-S1-R1-spnA      SMC5    5min        S1  False  False   \n",
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       "198   SMC5-AID-10min-S1-R1-spnA      SMC5   10min        S1  False  False   \n",
       "199   SMC5-AID-15min-S1-R1-spnA      SMC5   15min        S1  False  False   \n",
       "200   SMC5-AID-30min-S1-R1-spnA      SMC5   30min        S1  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "194  True       True  \n",
       "195  True       True  \n",
       "196  True       True  \n",
       "197  True       True  \n",
       "198  True       True  \n",
       "199  True       True  \n",
       "200  True       True  "
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "201      WAPL-AID-G2-S1-R1-spnA      WAPL      G2        S1  False  False   \n",
       "202  WAPL-AID-2.5min-S1-R1-spnA      WAPL  2.5min        S1  False  False   \n",
       "203    WAPL-AID-5min-S1-R1-spnA      WAPL    5min        S1  False  False   \n",
       "204  WAPL-AID-7.5min-S1-R1-spnA      WAPL  7.5min        S1  False  False   \n",
       "205   WAPL-AID-11min-S1-R1-spnA      WAPL   10min        S1  False  False   \n",
       "206   WAPL-AID-15min-S1-R1-spnA      WAPL   15min        S1  False  False   \n",
       "207   WAPL-AID-30min-S1-R1-spnA      WAPL   30min        S1  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "201  True      False  \n",
       "202  True      False  \n",
       "203  True      False  \n",
       "204  True      False  \n",
       "205  True      False  \n",
       "206  True      False  \n",
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       "      <td>WAPL-AID-7.5min-S2-R1-spna</td>\n",
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       "      <td>WAPL-AID-30min-S2-R1-spna</td>\n",
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       "      <td>False</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "208      WAPL-AID-G2-S2-R1-spna      WAPL      G2        S2  False  False   \n",
       "209  WAPL-AID-2.5min-S2-R1-spna      WAPL  2.5min        S2  False  False   \n",
       "210    WAPL-AID-5min-S2-R1-spna      WAPL    5min        S2  False  False   \n",
       "211  WAPL-AID-7.5min-S2-R1-spna      WAPL  7.5min        S2  False  False   \n",
       "212   WAPL-AID-11min-S2-R1-spna      WAPL   10min        S2  False  False   \n",
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       "214   WAPL-AID-30min-S2-R1-spna      WAPL   30min        S2  False  False   \n",
       "\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "215      WAPL-AID-G2-S3-R2-spnA      WAPL      G2        S3  False  False   \n",
       "216  WAPL-AID-2.5min-S3-R2-spnA      WAPL  2.5min        S3  False  False   \n",
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       "219   WAPL-AID-11min-S3-R2-spnA      WAPL   10min        S3  False  False   \n",
       "220   WAPL-AID-15min-S3-R2-spnA      WAPL   15min        S3  False  False   \n",
       "221   WAPL-AID-30min-S3-R2-spnA      WAPL   30min        S3  False  False   \n",
       "\n",
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       "      <td>WAPL</td>\n",
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       "      <td>WAPL-AID-30min-S4-R2-spna</td>\n",
       "      <td>WAPL</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
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       "223  WAPL-AID-2.5min-S4-R2-spna      WAPL  2.5min        S4  False  False   \n",
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       "228   WAPL-AID-30min-S4-R2-spna      WAPL   30min        S4  False  False   \n",
       "\n",
       "         A  preferred  \n",
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       "224  False       True  \n",
       "225  False       True  \n",
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       "      <td>WAPL</td>\n",
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       "      <td>WAPL</td>\n",
       "      <td>5min</td>\n",
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       "      <td>WAPL</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <td>WAPL-AID-10min-S5-R3-spnA</td>\n",
       "      <td>WAPL</td>\n",
       "      <td>10min</td>\n",
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       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <td>WAPL-AID-15min-S5-R3-spnA</td>\n",
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       "    <tr>\n",
       "      <th>235</th>\n",
       "      <td>WAPL-AID-30min-S5-R3-spnA</td>\n",
       "      <td>WAPL</td>\n",
       "      <td>30min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "229      WAPL-AID-G2-S5-R3-spnA      WAPL      G2        S5  False  False   \n",
       "230  WAPL-AID-2.5min-S5-R3-spnA      WAPL  2.5min        S5  False  False   \n",
       "231    WAPL-AID-5min-S5-R3-spnA      WAPL    5min        S5  False  False   \n",
       "232  WAPL-AID-7.5min-S5-R3-spnA      WAPL  7.5min        S5  False  False   \n",
       "233   WAPL-AID-10min-S5-R3-spnA      WAPL   10min        S5  False  False   \n",
       "234   WAPL-AID-15min-S5-R3-spnA      WAPL   15min        S5  False  False   \n",
       "235   WAPL-AID-30min-S5-R3-spnA      WAPL   30min        S5  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "229  True       True  \n",
       "230  True       True  \n",
       "231  True       True  \n",
       "232  True       True  \n",
       "233  True       True  \n",
       "234  True       True  \n",
       "235  True       True  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
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       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
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       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>236</th>\n",
       "      <td>WT-G2-S4-R5-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>237</th>\n",
       "      <td>WT-2.5min-S4-R2-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>238</th>\n",
       "      <td>WT-5min-S4-R3-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>239</th>\n",
       "      <td>WT-7.5min-S4-R2-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>240</th>\n",
       "      <td>WT-10min-S4-R3-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>10min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>241</th>\n",
       "      <td>WT-15min-S4-R3-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                 lib_name condition    time replicate      S    N/M      A  \\\n",
       "236      WT-G2-S4-R5-spna        WT      G2        S4  False  False  False   \n",
       "237  WT-2.5min-S4-R2-spna        WT  2.5min        S4  False  False  False   \n",
       "238    WT-5min-S4-R3-spna        WT    5min        S4  False  False  False   \n",
       "239  WT-7.5min-S4-R2-spna        WT  7.5min        S4  False  False  False   \n",
       "240   WT-10min-S4-R3-spna        WT   10min        S4  False  False  False   \n",
       "241   WT-15min-S4-R3-spna        WT   15min        S4  False  False  False   \n",
       "\n",
       "     preferred  \n",
       "236       True  \n",
       "237       True  \n",
       "238       True  \n",
       "239       True  \n",
       "240       True  \n",
       "241       True  "
      ]
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       "  <tbody>\n",
       "    <tr>\n",
       "      <th>242</th>\n",
       "      <td>WT-G2-S5-R6-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>G2</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>243</th>\n",
       "      <td>WT-G2-S5-R7-spnA</td>\n",
       "      <td>WT</td>\n",
       "      <td>G2</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>244</th>\n",
       "      <td>WT-G2-S5-R8-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>G2</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>245</th>\n",
       "      <td>WT-2.5min-S5-R3-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>246</th>\n",
       "      <td>WT-5min-S5-R4-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>5min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>247</th>\n",
       "      <td>WT-7.5min-S5-R3-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>248</th>\n",
       "      <td>WT-10min-S5-R4-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>10min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>249</th>\n",
       "      <td>WT-15min-S5-R4-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>15min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>250</th>\n",
       "      <td>WT-30min-S5-R5-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>30min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>251</th>\n",
       "      <td>WT-60min-S5-R4-spMa</td>\n",
       "      <td>WT</td>\n",
       "      <td>60min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>252</th>\n",
       "      <td>WT-90min-S5-R1-spMa</td>\n",
       "      <td>WT</td>\n",
       "      <td>90min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                 lib_name condition    time replicate      S    N/M      A  \\\n",
       "242      WT-G2-S5-R6-spna        WT      G2        S5  False  False  False   \n",
       "243      WT-G2-S5-R7-spnA        WT      G2        S5  False  False   True   \n",
       "244      WT-G2-S5-R8-spna        WT      G2        S5  False  False  False   \n",
       "245  WT-2.5min-S5-R3-spna        WT  2.5min        S5  False  False  False   \n",
       "246    WT-5min-S5-R4-spna        WT    5min        S5  False  False  False   \n",
       "247  WT-7.5min-S5-R3-spna        WT  7.5min        S5  False  False  False   \n",
       "248   WT-10min-S5-R4-spna        WT   10min        S5  False  False  False   \n",
       "249   WT-15min-S5-R4-spna        WT   15min        S5  False  False  False   \n",
       "250   WT-30min-S5-R5-spna        WT   30min        S5  False  False  False   \n",
       "251   WT-60min-S5-R4-spMa        WT   60min        S5  False   True  False   \n",
       "252   WT-90min-S5-R1-spMa        WT   90min        S5  False   True  False   \n",
       "\n",
       "     preferred  \n",
       "242      False  \n",
       "243      False  \n",
       "244      False  \n",
       "245      False  \n",
       "246      False  \n",
       "247      False  \n",
       "248      False  \n",
       "249      False  \n",
       "250       True  \n",
       "251      False  \n",
       "252      False  "
      ]
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       "  <tbody>\n",
       "    <tr>\n",
       "      <th>253</th>\n",
       "      <td>WT-G2-S6-R9-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>G2</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>254</th>\n",
       "      <td>WT-30min-S6-R6-spNa</td>\n",
       "      <td>WT</td>\n",
       "      <td>30min</td>\n",
       "      <td>S6</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                lib_name condition   time replicate      S    N/M      A  \\\n",
       "253     WT-G2-S6-R9-spna        WT     G2        S6  False  False  False   \n",
       "254  WT-30min-S6-R6-spNa        WT  30min        S6  False   True  False   \n",
       "\n",
       "     preferred  \n",
       "253      False  \n",
       "254      False  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "df.loc[:, 'preferred'] = False\n",
    "\n",
    "caph = (df['condition'] == 'CAPH') & (df['replicate'] == 'S3') \n",
    "df.loc[caph, 'preferred'] = True\n",
    "\n",
    "caph2 = (df['condition'] == 'CAPH2') & (df['replicate'] == 'S3') \n",
    "df.loc[caph2, 'preferred'] = True\n",
    "\n",
    "ctcf = (df['condition'] == 'CTCF') \n",
    "df.loc[ctcf, 'preferred'] = True\n",
    "\n",
    "kif4 = (df['condition'] == 'KIF4') \n",
    "df.loc[kif4, 'preferred'] = True\n",
    "\n",
    "smc2 = (df['condition'] == 'SMC2') & (df['replicate'] == 'S4') \n",
    "df.loc[smc2, 'preferred'] = True\n",
    "\n",
    "smc2_wapl = (df['condition'] == 'SMC2-WAPL') & (df['replicate'] == 'S2') \n",
    "df.loc[smc2_wapl, 'preferred'] = True\n",
    "\n",
    "smc3 = (df['condition'] == 'SMC3') \n",
    "smc3 = smc3 & (((df['replicate'] == 'S1') | (df['replicate'] == 'S2')) | (df['replicate'] == 'S4')) \n",
    "df.loc[smc3, 'preferred'] = True\n",
    "\n",
    "smc3_caph = (df['condition'] == 'SMC3-CAPH') & ((df['replicate'] == 'S3') | (df['replicate'] == 'S2'))\n",
    "df.loc[smc3_caph, 'preferred'] = True\n",
    "\n",
    "smc3_caph2 = (df['condition'] == 'SMC3-CAPH2') & ((df['replicate'] == 'S3') | (df['replicate'] == 'S2'))\n",
    "df.loc[smc3_caph2, 'preferred'] = True\n",
    "\n",
    "smc3_ctcf = (df['condition'] == 'SMC3-CTCF') \n",
    "df.loc[smc3_ctcf, 'preferred'] = True\n",
    "\n",
    "smc3_kif4 = (df['condition'] == 'SMC3-KIF4') \n",
    "df.loc[smc3_kif4, 'preferred'] = True\n",
    "\n",
    "smc3_smc2 = (df['condition'] == 'SMC3-SMC2') \n",
    "df.loc[smc3_smc2, 'preferred'] = True\n",
    "\n",
    "smc5 = (df['condition'] == 'SMC5') \n",
    "df.loc[smc5, 'preferred'] = True\n",
    "\n",
    "wapl = (df['condition'] == 'WAPL') & ((df['replicate'] == 'S5') | (df['replicate'] == 'S4'))\n",
    "df.loc[wapl, 'preferred'] = True\n",
    "\n",
    "wt = (df['condition'] == 'WT')\n",
    "m1 = wt & ((df['replicate'] == 'S4') & (df['time'] < '30min'))\n",
    "m2 = wt & ((df['replicate'] == 'S5') & (df['time'] == '30min'))\n",
    "wt = m1 | m2\n",
    "df.loc[wt, 'preferred'] = True\n",
    "\n",
    "for _, group in df.groupby(['condition','replicate']):\n",
    "    display(group)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Persistent database creation  using the shelve libarary"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-12-15T18:18:47.520865Z",
     "start_time": "2022-12-15T18:18:47.507075Z"
    },
    "code_folding": []
   },
   "outputs": [],
   "source": [
    "db_path = '/home/sameer/mitosis/galGal7/metadata/galGal7_info'\n",
    "with shelve.open(db_path, flag='c') as db:\n",
    "    db['metadata'] = df"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# Testing the mitosis_manager script"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Initial importation of database"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:39:11.610791Z",
     "start_time": "2023-05-18T01:39:11.064970Z"
    },
    "scrolled": true
   },
   "outputs": [
    {
     "data": {
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       "      <th>0</th>\n",
       "      <td>CAPH-AID-G2-S3-R5-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>CAPH-AID-2.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>CAPH-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>CAPH-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>CAPH-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>5</th>\n",
       "      <td>CAPH-AID-15min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>6</th>\n",
       "      <td>CAPH-AID-30min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                     lib_name condition    time replicate      S    N/M     A  \\\n",
       "0      CAPH-AID-G2-S3-R5-spnA      CAPH      G2        S3  False  False  True   \n",
       "1  CAPH-AID-2.5min-S3-R3-spnA      CAPH  2.5min        S3  False  False  True   \n",
       "2  CAPH-AID-7.5min-S3-R3-spnA      CAPH    5min        S3  False  False  True   \n",
       "3    CAPH-AID-5min-S3-R3-spnA      CAPH  7.5min        S3  False  False  True   \n",
       "4   CAPH-AID-10min-S3-R3-spnA      CAPH   10min        S3  False  False  True   \n",
       "5   CAPH-AID-15min-S3-R3-spnA      CAPH   15min        S3  False  False  True   \n",
       "6   CAPH-AID-30min-S3-R3-spnA      CAPH   30min        S3  False  False  True   \n",
       "\n",
       "   preferred  \n",
       "0       True  \n",
       "1       True  \n",
       "2       True  \n",
       "3       True  \n",
       "4       True  \n",
       "5       True  \n",
       "6       True  "
      ]
     },
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     "data": {
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       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>7</th>\n",
       "      <td>CAPH2-AID-G2-S3-R5-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>8</th>\n",
       "      <td>CAPH2-AID-2.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>9</th>\n",
       "      <td>CAPH2-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>10</th>\n",
       "      <td>CAPH2-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>11</th>\n",
       "      <td>CAPH2-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>12</th>\n",
       "      <td>CAPH2-AID-15min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>13</th>\n",
       "      <td>CAPH2-AID-30min-S3-R3-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "7       CAPH2-AID-G2-S3-R5-spnA     CAPH2      G2        S3  False  False   \n",
       "8   CAPH2-AID-2.5min-S3-R3-spnA     CAPH2  2.5min        S3  False  False   \n",
       "9     CAPH2-AID-5min-S3-R3-spnA     CAPH2    5min        S3  False  False   \n",
       "10  CAPH2-AID-7.5min-S3-R3-spnA     CAPH2  7.5min        S3  False  False   \n",
       "11   CAPH2-AID-10min-S3-R3-spnA     CAPH2   10min        S3  False  False   \n",
       "12   CAPH2-AID-15min-S3-R3-spnA     CAPH2   15min        S3  False  False   \n",
       "13   CAPH2-AID-30min-S3-R3-spnA     CAPH2   30min        S3  False  False   \n",
       "\n",
       "       A  preferred  \n",
       "7   True       True  \n",
       "8   True       True  \n",
       "9   True       True  \n",
       "10  True       True  \n",
       "11  True       True  \n",
       "12  True       True  \n",
       "13  True       True  "
      ]
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       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>14</th>\n",
       "      <td>CAPH2-AID-G2-S4-R6-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>CAPH2-AID-5min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>5min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>CAPH2-AID-10min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>CAPH2-AID-15min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>18</th>\n",
       "      <td>CAPH2-AID-15min-S4-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>19</th>\n",
       "      <td>CAPH2-AID-15min-S4-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>20</th>\n",
       "      <td>CAPH2-AID-30min-S4-R4-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>21</th>\n",
       "      <td>CAPH2-AID-30min-S4-R4-spnA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>22</th>\n",
       "      <td>CAPH2-AID-30min-S4-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>23</th>\n",
       "      <td>CAPH2-AID-30min-S4-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>24</th>\n",
       "      <td>CAPH2-AID-30min-S4-R8-spNa</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                      lib_name condition   time replicate      S    N/M  \\\n",
       "14     CAPH2-AID-G2-S4-R6-spnA     CAPH2     G2        S4  False  False   \n",
       "15   CAPH2-AID-5min-S4-R4-spnA     CAPH2   5min        S4  False  False   \n",
       "16  CAPH2-AID-10min-S4-R4-spnA     CAPH2  10min        S4  False  False   \n",
       "17  CAPH2-AID-15min-S4-R4-spnA     CAPH2  15min        S4  False  False   \n",
       "18  CAPH2-AID-15min-S4-R5-spNA     CAPH2  15min        S4  False   True   \n",
       "19  CAPH2-AID-15min-S4-R6-spNA     CAPH2  15min        S4  False   True   \n",
       "20  CAPH2-AID-30min-S4-R4-spNa     CAPH2  30min        S4  False   True   \n",
       "21  CAPH2-AID-30min-S4-R4-spnA     CAPH2  30min        S4  False  False   \n",
       "22  CAPH2-AID-30min-S4-R5-spNA     CAPH2  30min        S4  False   True   \n",
       "23  CAPH2-AID-30min-S4-R6-spNA     CAPH2  30min        S4  False   True   \n",
       "24  CAPH2-AID-30min-S4-R8-spNa     CAPH2  30min        S4  False   True   \n",
       "\n",
       "        A  preferred  \n",
       "14   True      False  \n",
       "15   True      False  \n",
       "16   True      False  \n",
       "17   True      False  \n",
       "18   True      False  \n",
       "19   True      False  \n",
       "20  False      False  \n",
       "21   True      False  \n",
       "22   True      False  \n",
       "23   True      False  \n",
       "24  False      False  "
      ]
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       "      <th></th>\n",
       "      <th>lib_name</th>\n",
       "      <th>condition</th>\n",
       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
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       "      <th>N/M</th>\n",
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       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>25</th>\n",
       "      <td>CAPH2-AID-G2-S5-R7-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>G2</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>26</th>\n",
       "      <td>CAPH2-AID-10min-S5-R5-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>27</th>\n",
       "      <td>CAPH2-AID-15min-S5-R6-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>28</th>\n",
       "      <td>CAPH2-AID-30min-S5-R9-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>29</th>\n",
       "      <td>CAPH2-AID-60min-S5-R3-spNA</td>\n",
       "      <td>CAPH2</td>\n",
       "      <td>60min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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      ],
      "text/plain": [
       "                      lib_name condition   time replicate      S   N/M     A  \\\n",
       "25     CAPH2-AID-G2-S5-R7-spNA     CAPH2     G2        S5  False  True  True   \n",
       "26  CAPH2-AID-10min-S5-R5-spNA     CAPH2  10min        S5  False  True  True   \n",
       "27  CAPH2-AID-15min-S5-R6-spNA     CAPH2  15min        S5  False  True  True   \n",
       "28  CAPH2-AID-30min-S5-R9-spNA     CAPH2  30min        S5  False  True  True   \n",
       "29  CAPH2-AID-60min-S5-R3-spNA     CAPH2  60min        S5  False  True  True   \n",
       "\n",
       "    preferred  \n",
       "25      False  \n",
       "26      False  \n",
       "27      False  \n",
       "28      False  \n",
       "29      False  "
      ]
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       "                       lib_name condition   time replicate      S   N/M  \\\n",
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       "33  CAPH2-AID-30min-S6-R10-spNa     CAPH2  30min        S6  False  True   \n",
       "34   CAPH2-AID-60min-S6-R3-spNa     CAPH2  60min        S6  False  True   \n",
       "\n",
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       "30  False      False  \n",
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       "                       lib_name condition   time replicate     S   N/M     A  \\\n",
       "35      CAPH2-AID-G2-S7-R9-SpNA     CAPH2     G2        S7  True  True  True   \n",
       "36   CAPH2-AID-15min-S7-R8-SpNA     CAPH2  15min        S7  True  True  True   \n",
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       "\n",
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       "                      lib_name condition    time replicate     S    N/M     A  \\\n",
       "39      CTCF-AID-G2-S1-R1-SpnA      CTCF      G2        S1  True  False  True   \n",
       "40  CTCF-AID-2.5min-S1-R1-SpnA      CTCF  2.5min        S1  True  False  True   \n",
       "41    CTCF-AID-5min-S1-R1-SpnA      CTCF    5min        S1  True  False  True   \n",
       "42  CTCF-AID-7.5min-S1-R1-SpnA      CTCF  7.5min        S1  True  False  True   \n",
       "43   CTCF-AID-10min-S1-R1-SpnA      CTCF   10min        S1  True  False  True   \n",
       "44   CTCF-AID-15min-S1-R1-SpnA      CTCF   15min        S1  True  False  True   \n",
       "45   CTCF-AID-30min-S1-R1-SpnA      CTCF   30min        S1  True  False  True   \n",
       "\n",
       "    preferred  \n",
       "39       True  \n",
       "40       True  \n",
       "41       True  \n",
       "42       True  \n",
       "43       True  \n",
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       "                     lib_name condition    time replicate    S    N/M      A  \\\n",
       "46      AID-KIF4-G2-S3-R5-pna      KIF4      G2        S3  NaN  False  False   \n",
       "47      AID-KIF4-G2-S3-R6-pna      KIF4      G2        S3  NaN  False  False   \n",
       "48  AID-KIF4-2.5min-S3-R1-pna      KIF4  2.5min        S3  NaN  False  False   \n",
       "49    AID-KIF4-5min-S3-R1-pna      KIF4    5min        S3  NaN  False  False   \n",
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       "51   AID-KIF4-10min-S3-R3-pna      KIF4   10min        S3  NaN  False  False   \n",
       "52   AID-KIF4-15min-S3-R3-pna      KIF4   15min        S3  NaN  False  False   \n",
       "53   AID-KIF4-30min-S3-R3-pna      KIF4   30min        S3  NaN  False  False   \n",
       "\n",
       "    preferred  \n",
       "46       True  \n",
       "47       True  \n",
       "48       True  \n",
       "49       True  \n",
       "50       True  \n",
       "51       True  \n",
       "52       True  \n",
       "53       True  "
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>57</th>\n",
       "      <td>SMC2-AID-7.5min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>58</th>\n",
       "      <td>SMC2-AID-10min-S3-R3-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>59</th>\n",
       "      <td>SMC2-AID-15min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>60</th>\n",
       "      <td>SMC2-AID-30min-S3-R2-spnA</td>\n",
       "      <td>SMC2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "                      lib_name condition    time replicate      S    N/M  \\\n",
       "54      SMC2-AID-G2-S3-R4-spnA      SMC2      G2        S3  False  False   \n",
       "55  SMC2-AID-2.5min-S3-R2-spnA      SMC2  2.5min        S3  False  False   \n",
       "56    SMC2-AID-5min-S3-R2-spnA      SMC2    5min        S3  False  False   \n",
       "57  SMC2-AID-7.5min-S3-R2-spnA      SMC2  7.5min        S3  False  False   \n",
       "58   SMC2-AID-10min-S3-R3-spnA      SMC2   10min        S3  False  False   \n",
       "59   SMC2-AID-15min-S3-R2-spnA      SMC2   15min        S3  False  False   \n",
       "60   SMC2-AID-30min-S3-R2-spnA      SMC2   30min        S3  False  False   \n",
       "\n",
       "       A  preferred  \n",
       "54  True      False  \n",
       "55  True      False  \n",
       "56  True      False  \n",
       "57  True      False  \n",
       "58  True      False  \n",
       "59  True      False  \n",
       "60  True      False  "
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       "                      lib_name condition    time replicate      S   N/M     A  \\\n",
       "61      SMC2-AID-G2-S4-R5-spNA      SMC2      G2        S4  False  True  True   \n",
       "62  SMC2-AID-2.5min-S4-R2-spNA      SMC2  2.5min        S4  False  True  True   \n",
       "63    SMC2-AID-5min-S4-R2-spNA      SMC2    5min        S4  False  True  True   \n",
       "64   SMC2-AID-15min-S4-R2-spNA      SMC2   10min        S4  False  True  True   \n",
       "65   SMC2-AID-10min-S4-R4-spNA      SMC2   15min        S4  False  True  True   \n",
       "66   SMC2-AID-30min-S4-R2-spNA      SMC2   30min        S4  False  True  True   \n",
       "\n",
       "    preferred  \n",
       "61       True  \n",
       "62       True  \n",
       "63       True  \n",
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       "65       True  \n",
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       "                           lib_name  condition    time replicate      S  \\\n",
       "68      SMC2-WAPL-AID-G2-S1-R1-spnA  SMC2-WAPL      G2        S1  False   \n",
       "69  SMC2-WAPL-AID-2.5min-S1-R1-spnA  SMC2-WAPL  2.5min        S1  False   \n",
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       "72   SMC2-WAPL-AID-10min-S1-R1-spnA  SMC2-WAPL   10min        S1  False   \n",
       "73   SMC2-WAPL-AID-15min-S1-R1-spnA  SMC2-WAPL   15min        S1  False   \n",
       "74   SMC2-WAPL-AID-30min-S1-R1-spnA  SMC2-WAPL   30min        S1  False   \n",
       "\n",
       "      N/M     A  preferred  \n",
       "68  False  True      False  \n",
       "69  False  True      False  \n",
       "70  False  True      False  \n",
       "71  False  True      False  \n",
       "72  False  True      False  \n",
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       "                           lib_name  condition    time replicate      S   N/M  \\\n",
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       "78   SMC2-WAPL-AID-10min-S2-R1-spNA  SMC2-WAPL   10min        S2  False  True   \n",
       "79   SMC2-WAPL-AID-15min-S2-R1-spNA  SMC2-WAPL   15min        S2  False  True   \n",
       "80   SMC2-WAPL-AID-30min-S2-R1-spNA  SMC2-WAPL   30min        S2  False  True   \n",
       "\n",
       "       A  preferred  \n",
       "75  True       True  \n",
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       "77  True       True  \n",
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       "      <th>time</th>\n",
       "      <th>replicate</th>\n",
       "      <th>S</th>\n",
       "      <th>N/M</th>\n",
       "      <th>A</th>\n",
       "      <th>preferred</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>81</th>\n",
       "      <td>SMC3-AID-G2-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>G2</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>82</th>\n",
       "      <td>SMC3-AID-2.5min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>2.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>83</th>\n",
       "      <td>SMC3-AID-5min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>84</th>\n",
       "      <td>SMC3-AID-7.5min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>85</th>\n",
       "      <td>SMC3-AID-10min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>86</th>\n",
       "      <td>SMC3-AID-15min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>87</th>\n",
       "      <td>SMC3-AID-30min-S1-R1-spna</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
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       "                      lib_name condition    time replicate      S    N/M  \\\n",
       "81      SMC3-AID-G2-S1-R1-spna      SMC3      G2        S1  False  False   \n",
       "82  SMC3-AID-2.5min-S1-R1-spna      SMC3  2.5min        S1  False  False   \n",
       "83    SMC3-AID-5min-S1-R1-spna      SMC3    5min        S1  False  False   \n",
       "84  SMC3-AID-7.5min-S1-R1-spna      SMC3  7.5min        S1  False  False   \n",
       "85   SMC3-AID-10min-S1-R1-spna      SMC3   10min        S1  False  False   \n",
       "86   SMC3-AID-15min-S1-R1-spna      SMC3   15min        S1  False  False   \n",
       "87   SMC3-AID-30min-S1-R1-spna      SMC3   30min        S1  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "81  False       True  \n",
       "82  False       True  \n",
       "83  False       True  \n",
       "84  False       True  \n",
       "85  False       True  \n",
       "86  False       True  \n",
       "87  False       True  "
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       "      <td>SMC3-AID-7.5min-S2-R2-SpnA</td>\n",
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       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "      <th>92</th>\n",
       "      <td>SMC3-AID-10min-S2-R2-SpnA</td>\n",
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       "      <td>True</td>\n",
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       "      <th>93</th>\n",
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       "      <td>SMC3-AID-30min-S2-R2-SpnA</td>\n",
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       "      <td>30min</td>\n",
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       "      <td>True</td>\n",
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       "                      lib_name condition    time replicate     S    N/M     A  \\\n",
       "88      SMC3-AID-G2-S2-R2-SpnA      SMC3      G2        S2  True  False  True   \n",
       "89  SMC3-AID-2.5min-S2-R2-SpnA      SMC3  2.5min        S2  True  False  True   \n",
       "90    SMC3-AID-5min-S2-R2-SpnA      SMC3    5min        S2  True  False  True   \n",
       "91  SMC3-AID-7.5min-S2-R2-SpnA      SMC3  7.5min        S2  True  False  True   \n",
       "92   SMC3-AID-10min-S2-R2-SpnA      SMC3   10min        S2  True  False  True   \n",
       "93   SMC3-AID-15min-S2-R2-SpnA      SMC3   15min        S2  True  False  True   \n",
       "94   SMC3-AID-30min-S2-R2-SpnA      SMC3   30min        S2  True  False  True   \n",
       "\n",
       "    preferred  \n",
       "88       True  \n",
       "89       True  \n",
       "90       True  \n",
       "91       True  \n",
       "92       True  \n",
       "93       True  \n",
       "94       True  "
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       "      <td>SMC3-AID-10min-S3-R3-spnA</td>\n",
       "      <td>SMC3</td>\n",
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       "      <td>False</td>\n",
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       "      <th>100</th>\n",
       "      <td>SMC3-AID-15min-S3-R3-spnA</td>\n",
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       "      <td>SMC3-AID-30min-S3-R3-spnA</td>\n",
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       "      <td>30min</td>\n",
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       "      <td>True</td>\n",
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       "      <th>102</th>\n",
       "      <td>SMC3-AID-60min-S3-R1-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>60min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "      <th>103</th>\n",
       "      <td>SMC3-AID-90min-S3-R1-spnA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>90min</td>\n",
       "      <td>S3</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "95       SMC3-AID-G2-S3-R3-spnA      SMC3      G2        S3  False  False   \n",
       "96   SMC3-AID-2.5min-S3-R3-spnA      SMC3  2.5min        S3  False  False   \n",
       "97     SMC3-AID-5min-S3-R3-spnA      SMC3    5min        S3  False  False   \n",
       "98   SMC3-AID-7.5min-S3-R3-spnA      SMC3  7.5min        S3  False  False   \n",
       "99    SMC3-AID-10min-S3-R3-spnA      SMC3   10min        S3  False  False   \n",
       "100   SMC3-AID-15min-S3-R3-spnA      SMC3   15min        S3  False  False   \n",
       "101   SMC3-AID-30min-S3-R3-spnA      SMC3   30min        S3  False  False   \n",
       "102   SMC3-AID-60min-S3-R1-spnA      SMC3   60min        S3  False  False   \n",
       "103   SMC3-AID-90min-S3-R1-spnA      SMC3   90min        S3  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "95   True      False  \n",
       "96   True      False  \n",
       "97   True      False  \n",
       "98   True      False  \n",
       "99   True      False  \n",
       "100  True      False  \n",
       "101  True      False  \n",
       "102  True      False  \n",
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       "      <th>108</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-AA-SPnAA</td>\n",
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       "      <td>5min</td>\n",
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       "      <td>SMC3-AID-5min-S4-R1-AN-SPnAa</td>\n",
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       "      <td>SMC3-AID-5min-S4-R1-NA-SPnaA</td>\n",
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       "      <td>5min</td>\n",
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       "      <th>111</th>\n",
       "      <td>SMC3-AID-5min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>5min</td>\n",
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       "    <tr>\n",
       "      <th>112</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>113</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>114</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "      <td>True</td>\n",
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       "    <tr>\n",
       "      <th>115</th>\n",
       "      <td>SMC3-AID-15min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>15min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>116</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-AA-SPnAA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>AA</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>117</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-AN-SPnAa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>Aa</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>118</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-NA-SPnaA</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aA</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>119</th>\n",
       "      <td>SMC3-AID-30min-S4-R1-NN-SPnaa</td>\n",
       "      <td>SMC3</td>\n",
       "      <td>30min</td>\n",
       "      <td>S4</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>aa</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
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      ],
      "text/plain": [
       "                          lib_name condition   time replicate     S    N/M  \\\n",
       "104     SMC3-AID-G2-S4-R1-AA-SPnAA      SMC3     G2        S4  True  False   \n",
       "105     SMC3-AID-G2-S4-R1-AN-SPnAa      SMC3     G2        S4  True  False   \n",
       "106     SMC3-AID-G2-S4-R1-NA-SPnaA      SMC3     G2        S4  True  False   \n",
       "107     SMC3-AID-G2-S4-R1-NN-SPnaa      SMC3     G2        S4  True  False   \n",
       "108   SMC3-AID-5min-S4-R1-AA-SPnAA      SMC3   5min        S4  True  False   \n",
       "109   SMC3-AID-5min-S4-R1-AN-SPnAa      SMC3   5min        S4  True  False   \n",
       "110   SMC3-AID-5min-S4-R1-NA-SPnaA      SMC3   5min        S4  True  False   \n",
       "111   SMC3-AID-5min-S4-R1-NN-SPnaa      SMC3   5min        S4  True  False   \n",
       "112  SMC3-AID-15min-S4-R1-AA-SPnAA      SMC3  15min        S4  True  False   \n",
       "113  SMC3-AID-15min-S4-R1-AN-SPnAa      SMC3  15min        S4  True  False   \n",
       "114  SMC3-AID-15min-S4-R1-NA-SPnaA      SMC3  15min        S4  True  False   \n",
       "115  SMC3-AID-15min-S4-R1-NN-SPnaa      SMC3  15min        S4  True  False   \n",
       "116  SMC3-AID-30min-S4-R1-AA-SPnAA      SMC3  30min        S4  True  False   \n",
       "117  SMC3-AID-30min-S4-R1-AN-SPnAa      SMC3  30min        S4  True  False   \n",
       "118  SMC3-AID-30min-S4-R1-NA-SPnaA      SMC3  30min        S4  True  False   \n",
       "119  SMC3-AID-30min-S4-R1-NN-SPnaa      SMC3  30min        S4  True  False   \n",
       "\n",
       "      A  preferred  \n",
       "104  AA       True  \n",
       "105  Aa       True  \n",
       "106  aA       True  \n",
       "107  aa       True  \n",
       "108  AA       True  \n",
       "109  Aa       True  \n",
       "110  aA       True  \n",
       "111  aa       True  \n",
       "112  AA       True  \n",
       "113  Aa       True  \n",
       "114  aA       True  \n",
       "115  aa       True  \n",
       "116  AA       True  \n",
       "117  Aa       True  \n",
       "118  aA       True  \n",
       "119  aa       True  "
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       "      <th>122</th>\n",
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       "      <td>SMC3-CAPH</td>\n",
       "      <td>5min</td>\n",
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       "      <td>False</td>\n",
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       "      <th>126</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S1-R1-spnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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      "text/plain": [
       "                            lib_name  condition    time replicate      S  \\\n",
       "120      SMC3-CAPH-AID-G2-S1-R1-spnA  SMC3-CAPH      G2        S1  False   \n",
       "121  SMC3-CAPH-AID-2.5min-S1-R1-spnA  SMC3-CAPH  2.5min        S1  False   \n",
       "122    SMC3-CAPH-AID-5min-S1-R1-spnA  SMC3-CAPH    5min        S1  False   \n",
       "123  SMC3-CAPH-AID-7.5min-S1-R1-spnA  SMC3-CAPH  7.5min        S1  False   \n",
       "124   SMC3-CAPH-AID-10min-S1-R1-spnA  SMC3-CAPH   10min        S1  False   \n",
       "125   SMC3-CAPH-AID-15min-S1-R1-spnA  SMC3-CAPH   15min        S1  False   \n",
       "126   SMC3-CAPH-AID-30min-S1-R1-spnA  SMC3-CAPH   30min        S1  False   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "120  False  True      False  \n",
       "121  False  True      False  \n",
       "122  False  True      False  \n",
       "123  False  True      False  \n",
       "124  False  True      False  \n",
       "125  False  True      False  \n",
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       "      <td>SMC3-CAPH-AID-2.5min-S2-R1-spna</td>\n",
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       "      <td>2.5min</td>\n",
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       "      <td>True</td>\n",
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       "      <th>131</th>\n",
       "      <td>SMC3-CAPH-AID-10min-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH</td>\n",
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       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
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       "      <td>False</td>\n",
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       "      <td>False</td>\n",
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       "                            lib_name  condition    time replicate      S  \\\n",
       "127      SMC3-CAPH-AID-G2-S2-R1-spna  SMC3-CAPH      G2        S2  False   \n",
       "128  SMC3-CAPH-AID-2.5min-S2-R1-spna  SMC3-CAPH  2.5min        S2  False   \n",
       "129    SMC3-CAPH-AID-5min-S2-R1-spna  SMC3-CAPH    5min        S2  False   \n",
       "130  SMC3-CAPH-AID-7.5min-S2-R1-spna  SMC3-CAPH  7.5min        S2  False   \n",
       "131   SMC3-CAPH-AID-10min-S2-R1-spna  SMC3-CAPH   10min        S2  False   \n",
       "132   SMC3-CAPH-AID-15min-S2-R1-spna  SMC3-CAPH   15min        S2  False   \n",
       "133   SMC3-CAPH-AID-30min-S2-R1-spna  SMC3-CAPH   30min        S2  False   \n",
       "\n",
       "       N/M      A  preferred  \n",
       "127  False  False       True  \n",
       "128  False  False       True  \n",
       "129  False  False       True  \n",
       "130  False  False       True  \n",
       "131  False  False       True  \n",
       "132  False  False       True  \n",
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       "    <tr>\n",
       "      <th>140</th>\n",
       "      <td>SMC3-CAPH-AID-30min-S3-R2-SpnA</td>\n",
       "      <td>SMC3-CAPH</td>\n",
       "      <td>30min</td>\n",
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       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "134      SMC3-CAPH-AID-G2-S3-R2-SpnA  SMC3-CAPH      G2        S3  True   \n",
       "135  SMC3-CAPH-AID-2.5min-S3-R2-SpnA  SMC3-CAPH  2.5min        S3  True   \n",
       "136    SMC3-CAPH-AID-5min-S3-R2-SpnA  SMC3-CAPH    5min        S3  True   \n",
       "137  SMC3-CAPH-AID-7.5min-S3-R2-SpnA  SMC3-CAPH  7.5min        S3  True   \n",
       "138   SMC3-CAPH-AID-10min-S3-R2-SpnA  SMC3-CAPH   10min        S3  True   \n",
       "139   SMC3-CAPH-AID-15min-S3-R2-SpnA  SMC3-CAPH   15min        S3  True   \n",
       "140   SMC3-CAPH-AID-30min-S3-R2-SpnA  SMC3-CAPH   30min        S3  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "134  False  True       True  \n",
       "135  False  True       True  \n",
       "136  False  True       True  \n",
       "137  False  True       True  \n",
       "138  False  True       True  \n",
       "139  False  True       True  \n",
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       "      <td>SMC3-CAPH2-AID-30min-S1-R1-SpnA</td>\n",
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       "      <td>True</td>\n",
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       "                             lib_name   condition    time replicate     S  \\\n",
       "141      SMC3-CAPH2-AID-G2-S1-R1-SpnA  SMC3-CAPH2      G2        S1  True   \n",
       "142  SMC3-CAPH2-AID-2.5min-S1-R1-SpnA  SMC3-CAPH2  2.5min        S1  True   \n",
       "143    SMC3-CAPH2-AID-5min-S1-R1-SpnA  SMC3-CAPH2    5min        S1  True   \n",
       "144  SMC3-CAPH2-AID-7.5min-S1-R1-SpnA  SMC3-CAPH2  7.5min        S1  True   \n",
       "145   SMC3-CAPH2-AID-10min-S1-R1-SpnA  SMC3-CAPH2   10min        S1  True   \n",
       "146   SMC3-CAPH2-AID-15min-S1-R1-SpnA  SMC3-CAPH2   15min        S1  True   \n",
       "147   SMC3-CAPH2-AID-30min-S1-R1-SpnA  SMC3-CAPH2   30min        S1  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "141  False  True      False  \n",
       "142  False  True      False  \n",
       "143  False  True      False  \n",
       "144  False  True      False  \n",
       "145  False  True      False  \n",
       "146  False  True      False  \n",
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       "      <th>152</th>\n",
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       "      <td>SMC3-CAPH2-AID-G2-S2-R1-spna</td>\n",
       "      <td>SMC3-CAPH2</td>\n",
       "      <td>30min</td>\n",
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       "                             lib_name   condition    time replicate      S  \\\n",
       "148   SMC3-CAPH2-AID-30min-S2-R1-spna  SMC3-CAPH2      G2        S2  False   \n",
       "149   SMC3-CAPH2-AID-15min-S2-R1-spna  SMC3-CAPH2  2.5min        S2  False   \n",
       "150   SMC3-CAPH2-AID-10min-S2-R1-spna  SMC3-CAPH2    5min        S2  False   \n",
       "151  SMC3-CAPH2-AID-7.5min-S2-R1-spna  SMC3-CAPH2  7.5min        S2  False   \n",
       "152    SMC3-CAPH2-AID-5min-S2-R1-spna  SMC3-CAPH2   10min        S2  False   \n",
       "153  SMC3-CAPH2-AID-2.5min-S2-R1-spna  SMC3-CAPH2   15min        S2  False   \n",
       "154      SMC3-CAPH2-AID-G2-S2-R1-spna  SMC3-CAPH2   30min        S2  False   \n",
       "\n",
       "       N/M      A  preferred  \n",
       "148  False  False       True  \n",
       "149  False  False       True  \n",
       "150  False  False       True  \n",
       "151  False  False       True  \n",
       "152  False  False       True  \n",
       "153  False  False       True  \n",
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       "      <td>SMC3-CAPH2</td>\n",
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       "                             lib_name   condition    time replicate     S  \\\n",
       "155      SMC3-CAPH2-AID-G2-S3-R2-SpnA  SMC3-CAPH2      G2        S3  True   \n",
       "156  SMC3-CAPH2-AID-2.5min-S3-R2-SpnA  SMC3-CAPH2  2.5min        S3  True   \n",
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       "\n",
       "       N/M     A  preferred  \n",
       "155  False  True       True  \n",
       "156  False  True       True  \n",
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       "158  False  True       True  \n",
       "159  False  True       True  \n",
       "160  False  True       True  \n",
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       "      <td>SMC3-CAPH2-AID-60min-S4-R1-SpNA</td>\n",
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       "                            lib_name   condition   time replicate     S   N/M  \\\n",
       "162     SMC3-CAPH2-AID-G2-S4-R3-SpNA  SMC3-CAPH2     G2        S4  True  True   \n",
       "163  SMC3-CAPH2-AID-15min-S4-R3-SpNA  SMC3-CAPH2  15min        S4  True  True   \n",
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       "165  SMC3-CAPH2-AID-60min-S4-R1-SpNA  SMC3-CAPH2  60min        S4  True  True   \n",
       "\n",
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       "                            lib_name  condition    time replicate     S  \\\n",
       "166      SMC3-CTCF-AID-G2-S1-R1-SpnA  SMC3-CTCF      G2        S1  True   \n",
       "167  SMC3-CTCF-AID-2.5min-S1-R1-SpnA  SMC3-CTCF  2.5min        S1  True   \n",
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       "                            lib_name  condition    time replicate      S  \\\n",
       "173      SMC3-CTCF-AID-G2-S2-R1-spna  SMC3-CTCF      G2        S2  False   \n",
       "174  SMC3-CTCF-AID-2.5min-S2-R1-spna  SMC3-CTCF  2.5min        S2  False   \n",
       "175    SMC3-CTCF-AID-5min-S2-R1-spna  SMC3-CTCF    5min        S2  False   \n",
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       "179   SMC3-CTCF-AID-30min-S2-R1-spna  SMC3-CTCF   30min        S2  False   \n",
       "\n",
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       "                            lib_name  condition    time replicate     S  \\\n",
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       "\n",
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       "      <th>191</th>\n",
       "      <td>SMC3-SMC2-AID-10min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-SMC2</td>\n",
       "      <td>10min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>192</th>\n",
       "      <td>SMC3-SMC2-AID-15min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-SMC2</td>\n",
       "      <td>15min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>193</th>\n",
       "      <td>SMC3-SMC2-AID-30min-S1-R1-SpnA</td>\n",
       "      <td>SMC3-SMC2</td>\n",
       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                            lib_name  condition    time replicate     S  \\\n",
       "187      SMC3-SMC2-AID-G2-S1-R1-SpnA  SMC3-SMC2      G2        S1  True   \n",
       "188  SMC3-SMC2-AID-2.5min-S1-R1-SpnA  SMC3-SMC2  2.5min        S1  True   \n",
       "189    SMC3-SMC2-AID-5min-S1-R1-SpnA  SMC3-SMC2    5min        S1  True   \n",
       "190  SMC3-SMC2-AID-7.5min-S1-R1-SpnA  SMC3-SMC2  7.5min        S1  True   \n",
       "191   SMC3-SMC2-AID-10min-S1-R1-SpnA  SMC3-SMC2   10min        S1  True   \n",
       "192   SMC3-SMC2-AID-15min-S1-R1-SpnA  SMC3-SMC2   15min        S1  True   \n",
       "193   SMC3-SMC2-AID-30min-S1-R1-SpnA  SMC3-SMC2   30min        S1  True   \n",
       "\n",
       "       N/M     A  preferred  \n",
       "187  False  True       True  \n",
       "188  False  True       True  \n",
       "189  False  True       True  \n",
       "190  False  True       True  \n",
       "191  False  True       True  \n",
       "192  False  True       True  \n",
       "193  False  True       True  "
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       "      <td>True</td>\n",
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       "      <th>198</th>\n",
       "      <td>SMC5-AID-10min-S1-R1-spnA</td>\n",
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       "      <td>SMC5-AID-30min-S1-R1-spnA</td>\n",
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       "      <td>30min</td>\n",
       "      <td>S1</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "194      SMC5-AID-G2-S1-R1-spnA      SMC5      G2        S1  False  False   \n",
       "195  SMC5-AID-2.5min-S1-R1-spnA      SMC5  2.5min        S1  False  False   \n",
       "196    SMC5-AID-5min-S1-R1-spnA      SMC5    5min        S1  False  False   \n",
       "197  SMC5-AID-7.5min-S1-R1-spnA      SMC5  7.5min        S1  False  False   \n",
       "198   SMC5-AID-10min-S1-R1-spnA      SMC5   10min        S1  False  False   \n",
       "199   SMC5-AID-15min-S1-R1-spnA      SMC5   15min        S1  False  False   \n",
       "200   SMC5-AID-30min-S1-R1-spnA      SMC5   30min        S1  False  False   \n",
       "\n",
       "        A  preferred  \n",
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       "195  True       True  \n",
       "196  True       True  \n",
       "197  True       True  \n",
       "198  True       True  \n",
       "199  True       True  \n",
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       "      <td>WAPL-AID-30min-S1-R1-spnA</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "201      WAPL-AID-G2-S1-R1-spnA      WAPL      G2        S1  False  False   \n",
       "202  WAPL-AID-2.5min-S1-R1-spnA      WAPL  2.5min        S1  False  False   \n",
       "203    WAPL-AID-5min-S1-R1-spnA      WAPL    5min        S1  False  False   \n",
       "204  WAPL-AID-7.5min-S1-R1-spnA      WAPL  7.5min        S1  False  False   \n",
       "205   WAPL-AID-11min-S1-R1-spnA      WAPL   10min        S1  False  False   \n",
       "206   WAPL-AID-15min-S1-R1-spnA      WAPL   15min        S1  False  False   \n",
       "207   WAPL-AID-30min-S1-R1-spnA      WAPL   30min        S1  False  False   \n",
       "\n",
       "        A  preferred  \n",
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       "202  True      False  \n",
       "203  True      False  \n",
       "204  True      False  \n",
       "205  True      False  \n",
       "206  True      False  \n",
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       "      <td>False</td>\n",
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       "      <th>214</th>\n",
       "      <td>WAPL-AID-30min-S2-R1-spna</td>\n",
       "      <td>WAPL</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "208      WAPL-AID-G2-S2-R1-spna      WAPL      G2        S2  False  False   \n",
       "209  WAPL-AID-2.5min-S2-R1-spna      WAPL  2.5min        S2  False  False   \n",
       "210    WAPL-AID-5min-S2-R1-spna      WAPL    5min        S2  False  False   \n",
       "211  WAPL-AID-7.5min-S2-R1-spna      WAPL  7.5min        S2  False  False   \n",
       "212   WAPL-AID-11min-S2-R1-spna      WAPL   10min        S2  False  False   \n",
       "213   WAPL-AID-15min-S2-R1-spna      WAPL   15min        S2  False  False   \n",
       "214   WAPL-AID-30min-S2-R1-spna      WAPL   30min        S2  False  False   \n",
       "\n",
       "         A  preferred  \n",
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       "209  False      False  \n",
       "210  False      False  \n",
       "211  False      False  \n",
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       "      <td>5min</td>\n",
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       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>218</th>\n",
       "      <td>WAPL-AID-7.5min-S3-R2-spnA</td>\n",
       "      <td>WAPL</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>219</th>\n",
       "      <td>WAPL-AID-11min-S3-R2-spnA</td>\n",
       "      <td>WAPL</td>\n",
       "      <td>10min</td>\n",
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       "      <td>False</td>\n",
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       "      <td>False</td>\n",
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       "      <th>220</th>\n",
       "      <td>WAPL-AID-15min-S3-R2-spnA</td>\n",
       "      <td>WAPL</td>\n",
       "      <td>15min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "    <tr>\n",
       "      <th>221</th>\n",
       "      <td>WAPL-AID-30min-S3-R2-spnA</td>\n",
       "      <td>WAPL</td>\n",
       "      <td>30min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "215      WAPL-AID-G2-S3-R2-spnA      WAPL      G2        S3  False  False   \n",
       "216  WAPL-AID-2.5min-S3-R2-spnA      WAPL  2.5min        S3  False  False   \n",
       "217    WAPL-AID-5min-S3-R2-spnA      WAPL    5min        S3  False  False   \n",
       "218  WAPL-AID-7.5min-S3-R2-spnA      WAPL  7.5min        S3  False  False   \n",
       "219   WAPL-AID-11min-S3-R2-spnA      WAPL   10min        S3  False  False   \n",
       "220   WAPL-AID-15min-S3-R2-spnA      WAPL   15min        S3  False  False   \n",
       "221   WAPL-AID-30min-S3-R2-spnA      WAPL   30min        S3  False  False   \n",
       "\n",
       "        A  preferred  \n",
       "215  True      False  \n",
       "216  True      False  \n",
       "217  True      False  \n",
       "218  True      False  \n",
       "219  True      False  \n",
       "220  True      False  \n",
       "221  True      False  "
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       "      <th>225</th>\n",
       "      <td>WAPL-AID-7.5min-S4-R2-spna</td>\n",
       "      <td>WAPL</td>\n",
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       "      <td>True</td>\n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "222      WAPL-AID-G2-S4-R2-spna      WAPL      G2        S4  False  False   \n",
       "223  WAPL-AID-2.5min-S4-R2-spna      WAPL  2.5min        S4  False  False   \n",
       "224    WAPL-AID-5min-S4-R2-spna      WAPL    5min        S4  False  False   \n",
       "225  WAPL-AID-7.5min-S4-R2-spna      WAPL  7.5min        S4  False  False   \n",
       "226   WAPL-AID-10min-S4-R2-spna      WAPL   10min        S4  False  False   \n",
       "227   WAPL-AID-15min-S4-R2-spna      WAPL   15min        S4  False  False   \n",
       "228   WAPL-AID-30min-S4-R2-spna      WAPL   30min        S4  False  False   \n",
       "\n",
       "         A  preferred  \n",
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       "223  False       True  \n",
       "224  False       True  \n",
       "225  False       True  \n",
       "226  False       True  \n",
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       "                       lib_name condition    time replicate      S    N/M  \\\n",
       "229      WAPL-AID-G2-S5-R3-spnA      WAPL      G2        S5  False  False   \n",
       "230  WAPL-AID-2.5min-S5-R3-spnA      WAPL  2.5min        S5  False  False   \n",
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       "233   WAPL-AID-10min-S5-R3-spnA      WAPL   10min        S5  False  False   \n",
       "234   WAPL-AID-15min-S5-R3-spnA      WAPL   15min        S5  False  False   \n",
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       "\n",
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       "                 lib_name condition    time replicate      S    N/M      A  \\\n",
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       "241   WT-15min-S4-R3-spna        WT   15min        S4  False  False  False   \n",
       "\n",
       "     preferred  \n",
       "236       True  \n",
       "237       True  \n",
       "238       True  \n",
       "239       True  \n",
       "240       True  \n",
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       "      <td>WT-5min-S5-R4-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>5min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>247</th>\n",
       "      <td>WT-7.5min-S5-R3-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>248</th>\n",
       "      <td>WT-10min-S5-R4-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>10min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>249</th>\n",
       "      <td>WT-15min-S5-R4-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>15min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>250</th>\n",
       "      <td>WT-30min-S5-R5-spna</td>\n",
       "      <td>WT</td>\n",
       "      <td>30min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>251</th>\n",
       "      <td>WT-60min-S5-R4-spMa</td>\n",
       "      <td>WT</td>\n",
       "      <td>60min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>252</th>\n",
       "      <td>WT-90min-S5-R1-spMa</td>\n",
       "      <td>WT</td>\n",
       "      <td>90min</td>\n",
       "      <td>S5</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                 lib_name condition    time replicate      S    N/M      A  \\\n",
       "242      WT-G2-S5-R6-spna        WT      G2        S5  False  False  False   \n",
       "243      WT-G2-S5-R7-spnA        WT      G2        S5  False  False   True   \n",
       "244      WT-G2-S5-R8-spna        WT      G2        S5  False  False  False   \n",
       "245  WT-2.5min-S5-R3-spna        WT  2.5min        S5  False  False  False   \n",
       "246    WT-5min-S5-R4-spna        WT    5min        S5  False  False  False   \n",
       "247  WT-7.5min-S5-R3-spna        WT  7.5min        S5  False  False  False   \n",
       "248   WT-10min-S5-R4-spna        WT   10min        S5  False  False  False   \n",
       "249   WT-15min-S5-R4-spna        WT   15min        S5  False  False  False   \n",
       "250   WT-30min-S5-R5-spna        WT   30min        S5  False  False  False   \n",
       "251   WT-60min-S5-R4-spMa        WT   60min        S5  False   True  False   \n",
       "252   WT-90min-S5-R1-spMa        WT   90min        S5  False   True  False   \n",
       "\n",
       "     preferred  \n",
       "242      False  \n",
       "243      False  \n",
       "244      False  \n",
       "245      False  \n",
       "246      False  \n",
       "247      False  \n",
       "248      False  \n",
       "249      False  \n",
       "250       True  \n",
       "251      False  \n",
       "252      False  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
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       "      <td>WT-G2-S6-R9-spna</td>\n",
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      ],
      "text/plain": [
       "                lib_name condition   time replicate      S    N/M      A  \\\n",
       "253     WT-G2-S6-R9-spna        WT     G2        S6  False  False  False   \n",
       "254  WT-30min-S6-R6-spNa        WT  30min        S6  False   True  False   \n",
       "\n",
       "     preferred  \n",
       "253      False  \n",
       "254      False  "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "imp.reload(mm)\n",
    "db = mm.Dataset()\n",
    "table = db.get_tables()\n",
    "for cond, group in table.groupby(['condition', 'replicate']):\n",
    "    display(group)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Adding a column to the database "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:39:36.274563Z",
     "start_time": "2023-05-18T01:39:36.253988Z"
    },
    "scrolled": true
   },
   "outputs": [
    {
     "data": {
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      ],
      "text/plain": [
       "                     lib_name auxin\n",
       "0      CAPH-AID-G2-S3-R5-spnA  True\n",
       "1  CAPH-AID-2.5min-S3-R3-spnA  True\n",
       "2  CAPH-AID-7.5min-S3-R3-spnA  True\n",
       "3    CAPH-AID-5min-S3-R3-spnA  True\n",
       "4   CAPH-AID-10min-S3-R3-spnA  True"
      ]
     },
     "execution_count": 5,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "dummy_df = table[['lib_name','A']].copy(deep=True)\n",
    "dummy_df.rename(columns={'A':'auxin'}, inplace=True)\n",
    "dummy_df.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:39:39.095039Z",
     "start_time": "2023-05-18T01:39:39.069071Z"
    }
   },
   "outputs": [],
   "source": [
    "db.add_table('dummy', dummy_df)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 10,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:40:31.340486Z",
     "start_time": "2023-05-18T01:40:31.293125Z"
    }
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       "      <td>CAPH-AID-5min-S3-R3-spnA</td>\n",
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       "      <td>CAPH</td>\n",
       "      <td>10min</td>\n",
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       "      <td>False</td>\n",
       "      <td>False</td>\n",
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       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                     lib_name condition    time replicate      S    N/M     A  \\\n",
       "0      CAPH-AID-G2-S3-R5-spnA      CAPH      G2        S3  False  False  True   \n",
       "1  CAPH-AID-2.5min-S3-R3-spnA      CAPH  2.5min        S3  False  False  True   \n",
       "2  CAPH-AID-7.5min-S3-R3-spnA      CAPH    5min        S3  False  False  True   \n",
       "3    CAPH-AID-5min-S3-R3-spnA      CAPH  7.5min        S3  False  False  True   \n",
       "4   CAPH-AID-10min-S3-R3-spnA      CAPH   10min        S3  False  False  True   \n",
       "\n",
       "   preferred auxin  \n",
       "0       True  True  \n",
       "1       True  True  \n",
       "2       True  True  \n",
       "3       True  True  \n",
       "4       True  True  "
      ]
     },
     "execution_count": 10,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "db2 = mm.Dataset()\n",
    "table = db2.get_tables('dummy')\n",
    "table.head()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Modifying an existing table in the database"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:40:54.123339Z",
     "start_time": "2023-05-18T01:40:54.105877Z"
    }
   },
   "outputs": [
    {
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      ],
      "text/plain": [
       "                     lib_name  auxin\n",
       "0      CAPH-AID-G2-S3-R5-spnA      1\n",
       "1  CAPH-AID-2.5min-S3-R3-spnA      1\n",
       "2  CAPH-AID-7.5min-S3-R3-spnA      1\n",
       "3    CAPH-AID-5min-S3-R3-spnA      1\n",
       "4   CAPH-AID-10min-S3-R3-spnA      1"
      ]
     },
     "execution_count": 12,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "modified_dummy = dummy_df.copy(deep=True)\n",
    "modified_dummy['auxin'] = modified_dummy['auxin'].apply(lambda x: 1 if x else 0)\n",
    "modified_dummy.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:41:17.871820Z",
     "start_time": "2023-05-18T01:41:17.853897Z"
    }
   },
   "outputs": [],
   "source": [
    "db.modify_table('dummy', modified_dummy)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2023-05-18T01:41:07.863625Z",
     "start_time": "2023-05-18T01:41:07.813662Z"
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   },
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       "      <th>2</th>\n",
       "      <td>CAPH-AID-7.5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>CAPH-AID-5min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>7.5min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>CAPH-AID-10min-S3-R3-spnA</td>\n",
       "      <td>CAPH</td>\n",
       "      <td>10min</td>\n",
       "      <td>S3</td>\n",
       "      <td>False</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>True</td>\n",
       "      <td>1</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                     lib_name condition    time replicate      S    N/M     A  \\\n",
       "0      CAPH-AID-G2-S3-R5-spnA      CAPH      G2        S3  False  False  True   \n",
       "1  CAPH-AID-2.5min-S3-R3-spnA      CAPH  2.5min        S3  False  False  True   \n",
       "2  CAPH-AID-7.5min-S3-R3-spnA      CAPH    5min        S3  False  False  True   \n",
       "3    CAPH-AID-5min-S3-R3-spnA      CAPH  7.5min        S3  False  False  True   \n",
       "4   CAPH-AID-10min-S3-R3-spnA      CAPH   10min        S3  False  False  True   \n",
       "\n",
       "   preferred  auxin  \n",
       "0       True      1  \n",
       "1       True      1  \n",
       "2       True      1  \n",
       "3       True      1  \n",
       "4       True      1  "
      ]
     },
     "execution_count": 14,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "db2 = mm.Dataset()\n",
    "table = db2.get_tables('dummy')\n",
    "table.head()"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T01:38:18.133890Z",
     "start_time": "2022-11-02T01:38:18.129536Z"
    }
   },
   "source": [
    "### Removing table from dataset"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T01:38:58.651459Z",
     "start_time": "2022-11-02T01:38:58.644184Z"
    }
   },
   "outputs": [],
   "source": [
    "db.remove_table('dummy')"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T01:39:10.521402Z",
     "start_time": "2022-11-02T01:39:10.492439Z"
    }
   },
   "outputs": [],
   "source": [
    "db2 = mm.Dataset()\n",
    "table = db2.get_tables('dummy')"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### FIltering data"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T12:27:09.977241Z",
     "start_time": "2022-11-02T12:27:09.943763Z"
    },
    "scrolled": true
   },
   "outputs": [],
   "source": [
    "imp.reload(mm)\n",
    "db = mm.Dataset()\n",
    "table = db.get_tables()\n",
    "table\n",
    "display(mm.filter_data(table, {'condition':'SMC3', 'A':'Aa', 'preferred':True}))\n",
    "# display(mm.filter_data(table, {'condition':['SMC3','SMC3-CAPH', 'SMC3-CAPH2','SMC3-SMC2'],\n",
    "#                                'aux':True, 'preferred':True}))"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Fetching coolers"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T17:07:12.320813Z",
     "start_time": "2022-11-02T17:07:10.882420Z"
    }
   },
   "outputs": [],
   "source": [
    "mm.get_coolers(table, 1000)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T17:08:14.464378Z",
     "start_time": "2022-11-02T17:08:14.312749Z"
    }
   },
   "outputs": [],
   "source": [
    "mm.get_coolers(table, 1000, filepath=True)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "### Fetching pairs"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T17:17:38.570088Z",
     "start_time": "2022-11-02T17:17:38.346390Z"
    },
    "scrolled": true
   },
   "outputs": [],
   "source": [
    "imp.reload(mm)\n",
    "mm.get_pairs(table)"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "# Colors"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-22T15:34:10.189568Z",
     "start_time": "2022-11-22T15:34:10.182595Z"
    }
   },
   "outputs": [],
   "source": [
    "condition_colors = {'WT':'#267326',\n",
    "                    \n",
    "                    'SMC3 +':'#0066cc',\n",
    "                    'SMC3 -':'#267326',\n",
    "                    \n",
    "                    'SMC3 --':'#267326',\n",
    "                    'SMC3 +-':'#53c653',\n",
    "                    'SMC3 -+':'#0066cc',\n",
    "                    'SMC3 ++':'#4da6ff',\n",
    "                    \n",
    "                    'SMC3-SMC2':'#b30000',\n",
    "                    'SMC2':'#ff8080',\n",
    "                    \n",
    "                    'SMC3-CAPH':'#7b3294',\n",
    "                    'CAPH':'#bc7ad1',\n",
    "                    \n",
    "                    'SMC3-CAPH2':'#b14e02',\n",
    "                    'CAPH2':'#fd8c35',\n",
    "                     }\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-29T19:49:50.059322Z",
     "start_time": "2022-11-29T19:49:50.052428Z"
    }
   },
   "outputs": [],
   "source": [
    "condition_colors = {'WT':'#b14e02', #35\n",
    "                    \n",
    "                    'SMC3 +':'#0073e6', #45\n",
    "                    'SMC3 -':'#b14e02', #35\n",
    "                    \n",
    "                    'SMC3 --':'#b14e02', #35\n",
    "                    'SMC3 +-':'#fd8c35', #60\n",
    "                    'SMC3 -+':'#0073e6', #45\n",
    "                    'SMC3 ++':'#66b3ff', #70\n",
    "                    \n",
    "                    'SMC3-SMC2':'#913bab', #45\n",
    "                    'SMC2':'#c68ed7', #70\n",
    "                    \n",
    "                    'SMC3-CAPH':'#e60000', #45 \n",
    "                    'CAPH':'#ff6666', #70\n",
    "                    \n",
    "                    'SMC3-CAPH2':'#39ac39', #45\n",
    "                    'CAPH2':'#8cd98c', #70\n",
    "                     }\n",
    "\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-29T19:49:50.501536Z",
     "start_time": "2022-11-29T19:49:50.489813Z"
    }
   },
   "outputs": [],
   "source": [
    "%matplotlib notebook"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-29T19:49:51.063326Z",
     "start_time": "2022-11-29T19:49:50.948602Z"
    }
   },
   "outputs": [],
   "source": [
    "n = len(condition_colors)\n",
    "\n",
    "fig, ax = plt.subplots(figsize=(4,0.25*n), constrained_layout=True)\n",
    "\n",
    "for i, key in enumerate(condition_colors.keys()):\n",
    "    ax.axhline(i,color=condition_colors[key], linewidth=10)\n",
    "    \n",
    "ax.set_yticks(np.arange(n))\n",
    "ax.set_xticks([])\n",
    "_ = ax.set_yticklabels(list(condition_colors.keys()))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-29T19:49:51.789689Z",
     "start_time": "2022-11-29T19:49:51.560600Z"
    }
   },
   "outputs": [],
   "source": [
    "fig = plt.figure(figsize=(4*2,0.3*9))\n",
    "gs = GridSpec(nrows=9, ncols=2)\n",
    "\n",
    "lw = 20\n",
    "\n",
    "\n",
    "keys = ['WT','SMC3 -','SMC3 --','SMC3 +-']\n",
    "ax = fig.add_subplot(gs[0:5,0])\n",
    "\n",
    "ax.set_title('Identical Hi-C in G2', fontweight='bold')\n",
    "for i, k in enumerate(keys):\n",
    "    ax.axhline(i,color=condition_colors[k], linewidth=lw)\n",
    "    ax.text(1, i-0.15, condition_colors[k])\n",
    "\n",
    "ax.set_ylim([-0.25,3+0.25])\n",
    "ax.set_yticks(np.arange(4))\n",
    "ax.set_xticks([])\n",
    "_ = ax.set_yticklabels(keys, fontweight='bold')\n",
    "\n",
    "keys = ['SMC3 +','SMC3 -+','SMC3 ++']\n",
    "ax = fig.add_subplot(gs[5:,0])\n",
    "\n",
    "for i, k in enumerate(keys):\n",
    "    ax.axhline(i,color=condition_colors[k], linewidth=lw)\n",
    "    ax.text(1, i-0.15, condition_colors[k])\n",
    "    \n",
    "ax.set_ylim([-0.25,2+0.25])\n",
    "ax.set_yticks(np.arange(3))\n",
    "ax.set_xticks([])\n",
    "_ = ax.set_yticklabels(keys, fontweight='bold')\n",
    "\n",
    "keys = ['SMC2','SMC3-SMC2']\n",
    "ax = fig.add_subplot(gs[0:3,1])\n",
    "\n",
    "ax.set_title('Double v Single', fontweight='bold')\n",
    "for i, k in enumerate(keys):\n",
    "    ax.axhline(i,color=condition_colors[k], linewidth=lw)\n",
    "    ax.text(1, i-0.15, condition_colors[k])\n",
    "    \n",
    "ax.set_ylim([-0.25,1+0.25])\n",
    "ax.set_yticks(np.arange(2))\n",
    "ax.set_xticks([])\n",
    "_ = ax.set_yticklabels(keys, fontweight='bold')\n",
    "\n",
    "keys = ['CAPH','SMC3-CAPH']\n",
    "ax = fig.add_subplot(gs[3:6,1])\n",
    "\n",
    "for i, k in enumerate(keys):\n",
    "    ax.axhline(i,color=condition_colors[k], linewidth=lw)\n",
    "    ax.text(1, i-0.15, condition_colors[k])\n",
    "    \n",
    "ax.set_ylim([-0.25,1+0.25])\n",
    "ax.set_yticks(np.arange(2))\n",
    "ax.set_xticks([])\n",
    "_ = ax.set_yticklabels(keys, fontweight='bold')\n",
    "\n",
    "keys = ['CAPH2','SMC3-CAPH2']\n",
    "ax = fig.add_subplot(gs[6:,1])\n",
    "\n",
    "for i, k in enumerate(keys):\n",
    "    ax.axhline(i,color=condition_colors[k], linewidth=lw)\n",
    "    ax.text(1, i-0.15, condition_colors[k])\n",
    "    \n",
    "ax.set_ylim([-0.25,1+0.25])\n",
    "ax.set_yticks(np.arange(2))\n",
    "ax.set_xticks([])\n",
    "_ = ax.set_yticklabels(keys, fontweight='bold')\n",
    "\n",
    "fig.tight_layout()\n",
    "# fig.savefig('/home/sameer/Dropbox (MIT)/Research/mitosis/manuscript/scaling_colors.png',format='png')"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T02:31:06.218122Z",
     "start_time": "2022-11-02T02:31:06.209988Z"
    }
   },
   "outputs": [],
   "source": []
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T02:27:23.698149Z",
     "start_time": "2022-11-02T02:27:23.693638Z"
    }
   },
   "outputs": [],
   "source": []
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2022-11-02T02:27:31.547478Z",
     "start_time": "2022-11-02T02:27:31.540185Z"
    }
   },
   "outputs": [],
   "source": []
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
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