From b1c213a71c5952eb8723a0553d47a2a4fc00529b Mon Sep 17 00:00:00 2001
From: ao508 <15623749+ao508@users.noreply.github.com>
Date: Thu, 6 Feb 2025 10:22:46 -0800
Subject: [PATCH] Adjacent Normal resolves to N (#103)

Signed-off-by: Angelica Ochoa <15623749+ao508@users.noreply.github.com>
---
 .../smile/service/impl/CmoLabelGeneratorServiceImpl.java      | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/main/java/org/mskcc/smile/service/impl/CmoLabelGeneratorServiceImpl.java b/src/main/java/org/mskcc/smile/service/impl/CmoLabelGeneratorServiceImpl.java
index 78030d1..205e49f 100644
--- a/src/main/java/org/mskcc/smile/service/impl/CmoLabelGeneratorServiceImpl.java
+++ b/src/main/java/org/mskcc/smile/service/impl/CmoLabelGeneratorServiceImpl.java
@@ -104,8 +104,8 @@ private static Map<CmoSampleClass, String> initCmoSampleClassAbbrevMap() {
         map.put(CmoSampleClass.RECURRENCE, "T");
         map.put(CmoSampleClass.METASTASIS, "T");
         map.put(CmoSampleClass.NORMAL, "N");
-        map.put(CmoSampleClass.ADJACENT_NORMAL, "A");
-        map.put(CmoSampleClass.ADJACENT_TISSUE, "T");
+        map.put(CmoSampleClass.ADJACENT_NORMAL, "N");
+        map.put(CmoSampleClass.ADJACENT_TISSUE, "A");
         return map;
     }