checking Rd cross-references ... WARNING Unknown package 'herit' in Rd xrefs
checking for missing documentation entries ... WARNING Undocumented data sets: 'tr_cap_phenos_met' All user-level objects in a package should have documentation entries. See chapter 'Writing R documentation files' in the 'Writing R Extensions' manual.
Documented arguments not in \usage in documentation object 'herit': 'ms_exp'
Undocumented arguments in documentation object 'herit_boot' 'ms_exp'
Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter 'Writing R documentation files' in the 'Writing R Extensions' manual.
checking DESCRIPTION meta-information ... NOTE Package listed in more than one of Depends, Imports, Suggests, Enhances: 'purrr' A package should be listed in only one of these fields.
checking top-level files ... NOTE Non-standard files/directories found at top level: 'README.Rmd' 'other_data' 'scripts'
checking R code for possible problems ... NOTE dist_env: no visible global function definition for 'combn' dist_env: no visible global function definition for 'as.dist' herit.lm: no visible global function definition for 'anova' herit.lm: no visible binding for global variable 'term' herit.lm: no visible binding for global variable 'meansq' herit.lmerMod: no visible binding for global variable 'grp' herit.lmerMod: no visible binding for global variable 'vcov' herit_boot.lm: no visible global function definition for 'model.frame' herit_boot.lm: no visible global function definition for 'simulate' ... 8 lines ... herit_boot.lmerMod: no visible global function definition for 'sd' herit_boot.lmerMod: no visible global function definition for 'quantile' Undefined global functions or variables: anova as.dist combn grp map_dbl meansq model.frame quantile sd simulate term update vcov Consider adding importFrom("stats", "anova", "as.dist", "model.frame", "quantile", "sd", "simulate", "update", "vcov") importFrom("utils", "combn") to your NAMESPACE file.
herit.lm: no visible binding for global variable ‘term’ (C:\Users\Jeff\Documents\Programming\pbr/R/herit.R:116-117) herit.lm: no visible binding for global variable ‘meansq’ (C:\Users\Jeff\Documents\Programming\pbr/R/herit.R:116-117) herit.lmerMod: no visible binding for global variable ‘grp’ (C:\Users\Jeff\Documents\Programming\pbr/R/herit.R:165-166) herit_boot.lm: no visible global function definition for ‘map_dbl’ (C:\Users\Jeff\Documents\Programming\pbr/R/herit_boot.R:111) herit_boot.lm: local variable ‘mf’ assigned but may not be used (C:\Users\Jeff\Documents\Programming\pbr/R/herit_boot.R:89) herit_boot.lmerMod: local variable ‘mf’ assigned but may not be used (C:\Users\Jeff\Documents\Programming\pbr/R/herit_boot.R:142)