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Use nf-core/setup-nf-test action for reusability

Use nf-core/setup-nf-test action for reusability #1012

Triggered via pull request July 5, 2024 15:25
@adamrtalbotadamrtalbot
opened #316
adamrtalbot:use_nf_test_action
Status Cancelled
Total duration 2m 36s
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66 errors and 113 warnings
modules/local/sra_to_samplesheet/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_to_samplesheet/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_fastq_ftp/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/multiqc_mappings_config/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/multiqc_mappings_config/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_ids_to_runinfo/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_fastq_ftp/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_skip_fastq_download.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_ids_to_runinfo/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_skip_fastq_download.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_download_method_sratools.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_download_method_aspera.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/aspera_cli/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_download_method_aspera.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/aspera_cli/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/sra/tests/sra_download_method_sratools.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-316' exists
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-23.04
The operation was canceled.
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-316' exists
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
tests/main.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-316' exists
tests/main.nf.test docker NF-23.04
The operation was canceled.
tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
tests/main.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-316' exists
tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
tests/main.nf.test docker NF-latest-everything
The operation was canceled.
Check for changes
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_to_samplesheet/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_to_samplesheet/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_to_samplesheet/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_to_samplesheet/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_fastq_ftp/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_fastq_ftp/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/multiqc_mappings_config/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/multiqc_mappings_config/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/multiqc_mappings_config/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/multiqc_mappings_config/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_ids_to_runinfo/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_ids_to_runinfo/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_fastq_ftp/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_fastq_ftp/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_skip_fastq_download.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_skip_fastq_download.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_ids_to_runinfo/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/sra_ids_to_runinfo/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_skip_fastq_download.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_skip_fastq_download.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_download_method_sratools.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_sratools.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_download_method_aspera.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_aspera.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/aspera_cli/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/aspera_cli/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_download_method_aspera.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_aspera.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/aspera_cli/tests/main.nf.test docker NF-23.04
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/aspera_cli/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/sra/tests/sra_download_method_sratools.nf.test docker NF-latest-everything
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_sratools.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/sra_runinfo_to_ftp/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23