From 402020b42149b19b297db2da15137a995044d3d6 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Mon, 10 Jun 2024 14:10:17 +0200 Subject: [PATCH] Update download URL to address https://github.com/nf-core/mag/issues/628 --- CHANGELOG.md | 2 ++ nextflow_schema.json | 2 +- 2 files changed, 3 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 521db7ed..1107406f 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -9,6 +9,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ### `Changed` +- [#625](https://github.com/nf-core/mag/pull/625) - Updated link to geNomad database for downloading (reported by @amizeranschi, fix by @jfy133) + ### `Fixed` - [#618](https://github.com/nf-core/mag/pull/618) - Fix CENTRIFUGE mkfifo failures by using work directory /tmp (reported by @skrakau, fix by @jfy133) diff --git a/nextflow_schema.json b/nextflow_schema.json index 59b8bb11..b2847b0c 100644 --- a/nextflow_schema.json +++ b/nextflow_schema.json @@ -588,7 +588,7 @@ "genomad_db": { "type": "string", "description": "Database for virus classification with geNomad", - "help_text": "Must be a directory containing the uncompressed contents from https://portal.nersc.gov/genomad/__data__/genomad_db_v1.1.tar.gz" + "help_text": "Must be a directory containing the uncompressed contents from https://zenodo.org/doi/10.5281/zenodo.6994741 (nf-core/mag tested with v1.1)" } } },